View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2438_low_2 (Length: 436)

Name: NF2438_low_2
Description: NF2438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2438_low_2
NF2438_low_2
[»] chr2 (8 HSPs)
chr2 (288-420)||(14108411-14108545)
chr2 (134-220)||(14108578-14108664)
chr2 (13-114)||(27081003-27081104)
chr2 (12-77)||(36330488-36330553)
chr2 (13-99)||(14108721-14108812)
chr2 (134-197)||(27080920-27080983)
chr2 (20-70)||(5722807-5722857)
chr2 (85-114)||(14108686-14108715)
[»] chr7 (11 HSPs)
chr7 (13-74)||(23777066-23777127)
chr7 (13-58)||(10595968-10596013)
chr7 (13-58)||(10596101-10596146)
chr7 (13-51)||(31305238-31305276)
chr7 (13-74)||(20335675-20335736)
chr7 (168-220)||(10596254-10596306)
chr7 (13-48)||(19367142-19367177)
chr7 (13-48)||(23803071-23803106)
chr7 (163-196)||(23803124-23803157)
chr7 (86-114)||(23777159-23777187)
chr7 (18-46)||(43951327-43951355)
[»] chr8 (5 HSPs)
chr8 (13-74)||(35699662-35699723)
chr8 (15-74)||(18605222-18605281)
chr8 (13-65)||(2259799-2259851)
chr8 (13-114)||(30595465-30595566)
chr8 (134-220)||(30595575-30595661)
[»] chr4 (19 HSPs)
chr4 (13-61)||(10350577-10350625)
chr4 (13-57)||(42540228-42540272)
chr4 (134-197)||(10395304-10395367)
chr4 (160-198)||(23780313-23780351)
chr4 (13-114)||(43364186-43364287)
chr4 (13-51)||(48141311-48141349)
chr4 (13-74)||(4485284-4485345)
chr4 (13-74)||(32896621-32896682)
chr4 (134-219)||(43364081-43364166)
chr4 (25-74)||(43955631-43955680)
chr4 (14-46)||(20678274-20678306)
chr4 (13-48)||(10381868-10381903)
chr4 (12-51)||(18740144-18740183)
chr4 (13-48)||(44833963-44833998)
chr4 (13-55)||(10334158-10334200)
chr4 (14-51)||(7672567-7672604)
chr4 (13-46)||(10395455-10395488)
chr4 (15-75)||(14126354-14126414)
chr4 (27-75)||(37255067-37255115)
[»] chr1 (9 HSPs)
chr1 (27-114)||(32567130-32567218)
chr1 (13-81)||(5993587-5993655)
chr1 (13-65)||(22786629-22786681)
chr1 (13-74)||(47930765-47930826)
chr1 (13-48)||(85720-85755)
chr1 (146-220)||(1345001-1345075)
chr1 (25-79)||(8812437-8812491)
chr1 (159-196)||(45376451-45376488)
chr1 (85-114)||(45376515-45376544)
[»] chr3 (10 HSPs)
chr3 (14-72)||(41264844-41264902)
chr3 (13-110)||(8473204-8473296)
chr3 (13-48)||(37152707-37152742)
chr3 (13-79)||(29630146-29630207)
chr3 (158-196)||(33186278-33186316)
chr3 (163-196)||(36343772-36343805)
chr3 (13-74)||(36343802-36343863)
chr3 (134-179)||(54801792-54801837)
chr3 (14-58)||(867537-867581)
chr3 (15-43)||(54801658-54801686)
[»] chr5 (10 HSPs)
chr5 (13-74)||(27514504-27514565)
chr5 (18-74)||(6644840-6644896)
chr5 (13-48)||(19914390-19914425)
chr5 (160-198)||(5131272-5131310)
chr5 (167-220)||(5131123-5131176)
chr5 (85-114)||(22920940-22920969)
chr5 (13-65)||(5791825-5791877)
chr5 (13-73)||(27946908-27946968)
chr5 (164-220)||(43259708-43259764)
chr5 (160-196)||(43259864-43259900)
[»] scaffold0024 (1 HSPs)
scaffold0024 (67-114)||(60114-60161)
[»] chr6 (2 HSPs)
chr6 (42-81)||(33427710-33427749)
chr6 (134-178)||(20836794-20836838)


Alignment Details
Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 288 - 420
Target Start/End: Complemental strand, 14108545 - 14108411
Alignment:
Q  288 ctactatcaaaagagtggatataaaagtgatttgaaatattattgaaaaactttcnnnnnnntcatcttgatgattttcagtatcgttcaattacattta 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||||||||||||||    
T  14108545 ctactatcaaaagagtggatataaaagtgatttgaaatattattgaaaaactttcaaaaaaatcatcttaatgattttcagtatcgttcaattacattta 14108446  T
Q  388 gactttttctc--ctcttgatatcttgttgtactt 420  Q
    ||| |||||||  ||||||||||||||||||||||    
T  14108445 gaccttttctcttctcttgatatcttgttgtactt 14108411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 14108664 - 14108578
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgttag 220  Q
    ||||| ||||||||||||| ||||| |||||||||||| |||||| |||||||||||||||||| |||||||||| |||||||||||    
T  14108664 caaattaaatcaaattttagttaccgaactgaactgaattgtttcgaaccaaactgaattgtttgagttaagtttcagaactgttag 14108578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 27081104 - 27081003
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcattt-----agaactgaattgtttcgggctgaactgaactgttattattga 107  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||      |||||||| ||||||   |||| ||||||| ||||||||||    
T  27081104 tgaactgtttgctaaatttaaaataa-----ctgaattgaactgtttgcattttgaactgaactgaactgtttcaaactgatctgaactattattattga 27081010  T
Q  108 taccttt 114  Q
    |||||||    
T  27081009 taccttt 27081003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 36330553 - 36330488
Alignment:
Q  12 atgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaattg 77  Q
    ||||||| |||| |||| ||||||||| |||||||||| ||||| ||||||||| |||||||||||    
T  36330553 atgaactatttgttaaaattaaaataactgaactgaatcgaactatttgcattttgaactgaattg 36330488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 14108812 - 14108721
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttag-----aactgaattgtttcgggctgaactgaactgtt 99  Q
    ||||||||||  ||||||||||||||||||| |||| ||||| |||||||||| |     ||||||||||||||  | ||||||||||||||    
T  14108812 tgaactgtttattaaatttaaaataattgaattgaactgaacagtttgcatttcgaactaaactgaattgtttcaaggtgaactgaactgtt 14108721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 27080983 - 27080920
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttcaaaccaaactgaattgttt 197  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||| || | ||||||| |||||    
T  27080983 caaatgaaattgaattttagttaccaaactgaactgaactgtttcgaatcgaactgaactgttt 27080920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 5722807 - 5722857
Alignment:
Q  20 tttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaac 70  Q
    ||||||||||||||||||| |||| |||| |||| ||||||||||| ||||    
T  5722807 tttgctaaatttaaaataactgaattgaactgaattgtttgcattttgaac 5722857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 14108715 - 14108686
Alignment:
Q  85 ctgaactgaactgttattattgataccttt 114  Q
    ||||||||||||||||||||||||||||||    
T  14108715 ctgaactgaactgttattattgataccttt 14108686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 23777066 - 23777127
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  23777066 tgaactgtttgctaaatttaaaataattgaactgaactgaaatgtttgtattttgaactgaa 23777127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10595968 - 10596013
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtt 58  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  10595968 tgaactgtttgctaaatttaaaataactgaactgaactgaactgtt 10596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10596101 - 10596146
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtt 58  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  10596101 tgaactgtttgctaaatttaaaataactgaactgaactgaactgtt 10596146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 31305238 - 31305276
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattg 51  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  31305238 tgaactgtttactaaatttaaaataattgaactgaattg 31305276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 20335675 - 20335736
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    ||||||||||| |||||||||||||||| |||  ||| |||||||||| |||| ||||||||    
T  20335675 tgaactgtttgataaatttaaaataattaaaccaaatcgaactgtttgtatttggaactgaa 20335736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 10596254 - 10596306
Alignment:
Q  168 tgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgttag 220  Q
    ||||||||||  ||| |||||||| |||||||||||||||| |||||||||||    
T  10596254 tgaactgttttgaactaaactgaactgtttcagttaagtttcagaactgttag 10596306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 19367142 - 19367177
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  19367142 tgaactgtttgctaaatttaaaataactgaactgaa 19367177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 23803071 - 23803106
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    |||| |||||||||||||||||||||||||||||||    
T  23803071 tgaattgtttgctaaatttaaaataattgaactgaa 23803106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 23803124 - 23803157
Alignment:
Q  163 tgaactgaactgtttcaaaccaaactgaattgtt 196  Q
    ||||||||||||||||||||| ||||||||||||    
T  23803124 tgaactgaactgtttcaaaccgaactgaattgtt 23803157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 114
Target Start/End: Original strand, 23777159 - 23777187
Alignment:
Q  86 tgaactgaactgttattattgataccttt 114  Q
    |||||||||||||||||||||||||||||    
T  23777159 tgaactgaactgttattattgataccttt 23777187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 43951327 - 43951355
Alignment:
Q  18 tgtttgctaaatttaaaataattgaactg 46  Q
    |||||||||||||||||||||||||||||    
T  43951327 tgtttgctaaatttaaaataattgaactg 43951355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 35699723 - 35699662
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||| |||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  35699723 tgaattgtttgataaatttaaaataattgaactggattgaattgtttgcatttcgaactgaa 35699662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 18605222 - 18605281
Alignment:
Q  15 aactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||||| ||||||||    
T  18605222 aactctttgctaaatttaaaataattaaactgaaccgaactgtttgcatttcgaactgaa 18605281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 2259799 - 2259851
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcattt 65  Q
    |||| |||||| |||||||||||||||||||| |||| |||||||||||||||    
T  2259799 tgaattgtttgttaaatttaaaataattgaaccgaatcgaactgtttgcattt 2259851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 30595465 - 30595566
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaattg-----tttcgggctgaactgaactgttattattga 107  Q
    |||| |||||||||||||||||||||  |||||||||||     ||||||||| ||| |||| ||     || ||  |||||||||||||||||||||||    
T  30595465 tgaattgtttgctaaatttaaaataaccgaactgaattg-----tttgcatttcgaattgaactgaactattccgaactgaactgaactgttattattga 30595559  T
Q  108 taccttt 114  Q
    |||||||    
T  30595560 taccttt 30595566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 30595575 - 30595661
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgttag 220  Q
    ||||||||||  ||||||| ||||| || |||||||||||||||  || | ||||| | |||||||||| ||||| |||||| ||||    
T  30595575 caaatgaaattgaattttagttaccgaattgaactgaactgttttgaatcgaactgtactgtttcagttcagtttcagaactattag 30595661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10350577 - 10350625
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgc 61  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  10350577 tgaattgtttgttaaatttaaaataattgaactgaattgaactgtttgc 10350625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 42540228 - 42540272
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgt 57  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||    
T  42540228 tgaattgtttgctaaatttaaaataattgaactgaactgaactgt 42540272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 10395367 - 10395304
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttcaaaccaaactgaattgttt 197  Q
    ||||||||||  ||||||||||||| ||||||||||||| |||||||| | ||||||| |||||    
T  10395367 caaatgaaattgaattttaattaccgaactgaactgaacagtttcaaatcgaactgaactgttt 10395304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 23780313 - 23780351
Alignment:
Q  160 aactgaactgaactgtttcaaaccaaactgaattgtttc 198  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  23780313 aactgaactgaactgtttcaaaccaaactgaactgtttc 23780351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 43364287 - 43364186
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatt-----tagaactgaattgtttcgggctgaactgaactgttattattga 107  Q
    ||||||||||||||||||||||||     ||||||| |||||||||||||||     | |||||||| |||||    | |||||||||||||||||||||    
T  43364287 tgaactgtttgctaaatttaaaat-----aactgaactgaactgtttgcatttcgaatcgaactgaactgttttaaaccgaactgaactgttattattga 43364193  T
Q  108 taccttt 114  Q
    |||||||    
T  43364192 taccttt 43364186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 48141349 - 48141311
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattg 51  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  48141349 tgaactgtttgctaaatttaaaataactgaactgaattg 48141311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 4485284 - 4485345
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||| ||||||||| ||||||||||| |||| ||||| |||||||||||||||  |||||||    
T  4485284 tgaattgtttgctagatttaaaataactgaaatgaatcgaactgtttgcattttaaactgaa 4485345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 32896682 - 32896621
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    ||||||||||||||||||||| |||| |||  ||||  ||||||||||||||| ||||||||    
T  32896682 tgaactgtttgctaaatttaagataactgagttgaaccgaactgtttgcattttgaactgaa 32896621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 43364166 - 43364081
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgtta 219  Q
    ||||||||||  || |||| ||||||||| ||||||||||||||  || | ||||||| ||||||| || ||||||||||| ||||    
T  43364166 caaatgaaattgaagtttagttaccaaaccgaactgaactgttttgaatcgaactgaactgtttcaattcagttttagaaccgtta 43364081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 43955680 - 43955631
Alignment:
Q  25 taaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||||||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  43955680 taaatttaaaataactgaacttaatcgaactgtttgcatttcgaactgaa 43955631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 20678274 - 20678306
Alignment:
Q  14 gaactgtttgctaaatttaaaataattgaactg 46  Q
    |||||||||||||||||||||||||||||||||    
T  20678274 gaactgtttgctaaatttaaaataattgaactg 20678306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 10381868 - 10381903
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  10381868 tgaactgtttgctaaatttaaaataaatgaactgaa 10381903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 18740183 - 18740144
Alignment:
Q  12 atgaactgtttgctaaatttaaaataattgaactgaattg 51  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  18740183 atgaactatttgctaaatttaaaataatagaactgaattg 18740144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 44833963 - 44833998
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  44833963 tgaactgtttgctaaatttaaaataactgaactgaa 44833998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 10334158 - 10334200
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaact 55  Q
    |||| |||||| |||||| ||||||||||||||||||||||||    
T  10334158 tgaattgtttgttaaattcaaaataattgaactgaattgaact 10334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 7672567 - 7672604
Alignment:
Q  14 gaactgtttgctaaatttaaaataattgaactgaattg 51  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  7672567 gaactgtttgctaaatttaaaataactgaactaaattg 7672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 10395488 - 10395455
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactg 46  Q
    |||||||||||||||||||||||||| |||||||    
T  10395488 tgaactgtttgctaaatttaaaataactgaactg 10395455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 14126354 - 14126414
Alignment:
Q  15 aactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaat 75  Q
    ||||||||||||||||||||| || |||||  || ||||||||||| |||| ||| |||||    
T  14126354 aactgtttgctaaatttaaaaaaactgaaccaaactgaactgtttgtatttcgaattgaat 14126414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 37255115 - 37255067
Alignment:
Q  27 aatttaaaataattgaactgaattgaactgtttgcatttagaactgaat 75  Q
    |||||||||||| |||||||||  ||| ||||||||||| |||||||||    
T  37255115 aatttaaaataactgaactgaaccgaattgtttgcatttcgaactgaat 37255067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 32567130 - 32567218
Alignment:
Q  27 aatttaaaataattgaactgaattgaactgtttgcatttagaactgaattgt-ttcgggctgaactgaactgttattattgataccttt 114  Q
    |||||||||||| ||||| ||| |||||||||||||||| ||| || ||||| |||   | ||||||||||||||||||||||||||||    
T  32567130 aatttaaaataactgaaccgaactgaactgtttgcatttcgaattggattgtgttcaaaccgaactgaactgttattattgataccttt 32567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 5993587 - 5993655
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaattgtttc 81  Q
    |||| |||| ||||||||||||||||||||||| ||   || ||||||||||| |||||||||||||||    
T  5993587 tgaattgttcgctaaatttaaaataattgaactaaaccaaattgtttgcatttcgaactgaattgtttc 5993655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 22786681 - 22786629
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcattt 65  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| ||||||    
T  22786681 tgaactgtttgctaaatttaaaataattgaactgaaccaaactgttcgcattt 22786629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 47930765 - 47930826
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||| ||||||||||||||||||||||| || ||||  ||||||||||||||| ||| ||||    
T  47930765 tgaattgtttgctaaatttaaaataattaaaatgaaccgaactgtttgcatttcgaattgaa 47930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 85720 - 85755
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    ||||||||||||||||||||||||||||||| ||||    
T  85720 tgaactgtttgctaaatttaaaataattgaattgaa 85755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 1345075 - 1345001
Alignment:
Q  146 aattttaattaccaaactgaactgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgttag 220  Q
    ||||||||||||  |||  ||| |||||||||| || ||||| ||| |||||||||| |||||||||| ||||||    
T  1345075 aattttaattacggaacataaccgaactgtttcgaatcaaaccgaactgtttcagtttagttttagaattgttag 1345001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 8812437 - 8812491
Alignment:
Q  25 taaatttaaaataattgaactgaattgaactgtttgcatttagaactgaattgtt 79  Q
    |||||||||||||| |||| |||| | |||||||||||||| |||||||| ||||    
T  8812437 taaatttaaaataactgaattgaactaaactgtttgcatttcgaactgaaatgtt 8812491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 45376451 - 45376488
Alignment:
Q  159 aaactgaactgaactgtttcaaaccaaactgaattgtt 196  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  45376451 aaactgaactgaactgtttcaaaccgaactgaactgtt 45376488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 45376515 - 45376544
Alignment:
Q  85 ctgaactgaactgttattattgataccttt 114  Q
    ||||||||||||||||||||||||||||||    
T  45376515 ctgaactgaactgttattattgataccttt 45376544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 41264844 - 41264902
Alignment:
Q  14 gaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactg 72  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||| |||| ||||||    
T  41264844 gaactgtttgttaaatttaaaataattgaactgaatcgaattgtttgtattttgaactg 41264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 8473296 - 8473204
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaattgtttcgggctgaactgaactgttattattgatac 110  Q
    ||||||||||||||||| |||| ||| |||||||||     || ||||||||| ||| |||| |||| ||  |||||| |||||||||||||||||||    
T  8473296 tgaactgtttgctaaatctaaactaactgaactgaa-----ctctttgcattttgaattgaactgttccgaactgaaccgaactgttattattgatac 8473204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 37152742 - 37152707
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  37152742 tgaactgtttgctaaatttaaaataactgaactgaa 37152707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 29630207 - 29630146
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaattgtt 79  Q
    ||||||||||||||||||| ||||     ||||||| |||||||||||||||| |||||||| ||||    
T  29630207 tgaactgtttgctaaatttgaaat-----aactgaactgaactgtttgcatttcgaactgaactgtt 29630146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 33186316 - 33186278
Alignment:
Q  158 caaactgaactgaactgtttcaaaccaaactgaattgtt 196  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  33186316 caaactgaattgaactgtttcaaaccgaactgaattgtt 33186278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 36343805 - 36343772
Alignment:
Q  163 tgaactgaactgtttcaaaccaaactgaattgtt 196  Q
    ||||||||||||||||||||||||||||| ||||    
T  36343805 tgaactgaactgtttcaaaccaaactgaactgtt 36343772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 36343863 - 36343802
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    |||||||| || ||||||||||||||||||| |||| | || ||||||||||| ||| ||||    
T  36343863 tgaactgtatgttaaatttaaaataattgaattgaactaaattgtttgcattttgaattgaa 36343802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 54801792 - 54801837
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttca 179  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||||    
T  54801792 caaacgaaatcgaattttagttaccgaactgaactgaactgtttca 54801837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 867581 - 867537
Alignment:
Q  14 gaactgtttgctaaatttaaaataattgaactgaattgaactgtt 58  Q
    |||||||||| |||||||||||||| |||||||||  ||||||||    
T  867581 gaactgtttggtaaatttaaaataactgaactgaaccgaactgtt 867537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 54801658 - 54801686
Alignment:
Q  15 aactgtttgctaaatttaaaataattgaa 43  Q
    |||||||||||||||||||||||||||||    
T  54801658 aactgtttgctaaatttaaaataattgaa 54801686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 27514565 - 27514504
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    ||||||||||| ||||||| |||||||||||||||| | || ||||||||||| ||||||||    
T  27514565 tgaactgtttgttaaattttaaataattgaactgaactaaattgtttgcatttcgaactgaa 27514504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 6644896 - 6644840
Alignment:
Q  18 tgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactgaa 74  Q
    ||||||||||||||||||||| |||| ||||  ||||| ||||||||| ||||||||    
T  6644896 tgtttgctaaatttaaaataactgaattgaaccgaactatttgcatttcgaactgaa 6644840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 19914390 - 19914425
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaa 48  Q
    |||||||||||||||||||||||||| |||||||||    
T  19914390 tgaactgtttgctaaatttaaaataactgaactgaa 19914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 5131310 - 5131272
Alignment:
Q  160 aactgaactgaactgtttcaaaccaaactgaattgtttc 198  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  5131310 aactgaactgaactgtttcaaaccgaactgaactgtttc 5131272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 5131176 - 5131123
Alignment:
Q  167 ctgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgttag 220  Q
    |||||||||||| || ||||||||| |||||||||| ||||| |||||| ||||    
T  5131176 ctgaactgtttcgaatcaaactgaactgtttcagttcagtttcagaactattag 5131123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 22920940 - 22920969
Alignment:
Q  85 ctgaactgaactgttattattgataccttt 114  Q
    ||||||||||||||||||||||||||||||    
T  22920940 ctgaactgaactgttattattgataccttt 22920969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 5791825 - 5791877
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcattt 65  Q
    ||||||||||| |||||||||||||| | || |||| | ||||||||||||||    
T  5791825 tgaactgtttgttaaatttaaaataacttaagtgaactcaactgtttgcattt 5791877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 27946908 - 27946968
Alignment:
Q  13 tgaactgtttgctaaatttaaaataattgaactgaattgaactgtttgcatttagaactga 73  Q
    |||| |||||| |||||||||||||| | ||||||| |||| |||||| |||| |||||||    
T  27946908 tgaattgtttgttaaatttaaaataactaaactgaactgaattgtttgtatttcgaactga 27946968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 43259764 - 43259708
Alignment:
Q  164 gaactgaactgtttcaaaccaaactgaattgtttcagttaagttttagaactgttag 220  Q
    ||||| ||||||||| |||  |||||||||||||||||| | ||| |||||||||||    
T  43259764 gaactaaactgtttcgaactgaactgaattgtttcagttcaatttcagaactgttag 43259708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 43259900 - 43259864
Alignment:
Q  160 aactgaactgaactgtttcaaaccaaactgaattgtt 196  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  43259900 aactgaactgaactgtttcaaaccgaactgaactgtt 43259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 60114 - 60161
Alignment:
Q  67 gaactgaattgtttcgggctgaactgaactgttattattgataccttt 114  Q
    |||||||| ||||||   ||||||||||||||||||||||||||||||    
T  60114 gaactgaactgtttcaaactgaactgaactgttattattgataccttt 60161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 33427710 - 33427749
Alignment:
Q  42 aactgaattgaactgtttgcatttagaactgaattgtttc 81  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  33427710 aactgaattgaactgtttgcattttgaactgaactgtttc 33427749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 20836794 - 20836838
Alignment:
Q  134 caaatgaaatcaaattttaattaccaaactgaactgaactgtttc 178  Q
    ||||||||||  ||||||| ||||| |||||||||||||||||||    
T  20836794 caaatgaaattgaattttagttaccgaactgaactgaactgtttc 20836838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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