View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2441_low_32 (Length: 293)
Name: NF2441_low_32
Description: NF2441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2441_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 30 - 288
Target Start/End: Complemental strand, 5207141 - 5206883
Alignment:
| Q |
30 |
aaaacaaggagggtgaagattgtttcaagggttatgcttctgcgtataaatatagtcggtatgagcaacaagtgtcctcctcatcaagcattcctcctct |
129 |
Q |
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| T |
5207141 |
aaaacaaggagggtgaagattgtttcaagggttatgcttctgcgtataaatatagtcggtatgagcaacaagtgtcctcctcatcaagcattcctcctct |
5207042 |
T |
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| Q |
130 |
tctatttcttcacaaattttatcaactgcatcaacatcctatatgaaatgtagatggaaaaatacacttgttaagcatcaatagaagacatgaaaaagat |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5207041 |
tctatttcttcacaaattttatcaactgcatcaacatcctatatgaaatgtagatggaaaaatacacttgttaagcatcaatagaagacatgaaaaagat |
5206942 |
T |
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| Q |
230 |
gtatnnnnnnnttaacaacaaatgaataacagcatcaacaaaccagattctgtggtgct |
288 |
Q |
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| T |
5206941 |
gtataaaaaaattaacaacaaatgaataacagcatcaacaaaccagtttctgtgttgct |
5206883 |
T |
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