View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2441_low_38 (Length: 278)
Name: NF2441_low_38
Description: NF2441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2441_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 43447656 - 43447476
Alignment:
| Q |
58 |
gttaatagcatgagattttcgttgaggtatgaaaccaaacacgtcttaactaagaattgatgatggtagcttcaattaaatagcctctaaggtttgccga |
157 |
Q |
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| T |
43447656 |
gttaatagcatgagattttcgttgaggtatgaaaccaaacacgtcttaactaagaattgataatggtagcctcaattaaatagcctctaaggtttgccga |
43447557 |
T |
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| Q |
158 |
aaatatttcactcaaactgtagtcagcgtcaccataccacattttccacccaaattaatcaagtagtggaattattatttt |
238 |
Q |
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| T |
43447556 |
aaatatttcactcaaactgtagttagcgtcaccataccacattttccacccaaattaatcaagtagtggaattattatttt |
43447476 |
T |
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