View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2441_low_49 (Length: 242)

Name: NF2441_low_49
Description: NF2441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2441_low_49
NF2441_low_49
[»] chr4 (25 HSPs)
chr4 (1-207)||(1548441-1548647)
chr4 (1-187)||(1552784-1552973)
chr4 (9-90)||(1524511-1524592)
chr4 (3-99)||(8187110-8187206)
chr4 (9-99)||(546897-546987)
chr4 (4-90)||(553472-553558)
chr4 (1-90)||(1513424-1513513)
chr4 (2-90)||(1508021-1508109)
chr4 (11-87)||(55908755-55908831)
chr4 (13-88)||(558493-558568)
chr4 (9-135)||(3438591-3438716)
chr4 (1-90)||(12121474-12121563)
chr4 (5-88)||(8184051-8184134)
chr4 (9-99)||(640899-640989)
chr4 (1-68)||(659726-659791)
chr4 (1-69)||(1519159-1519227)
chr4 (6-97)||(55505130-55505221)
chr4 (1-99)||(7307844-7307942)
chr4 (11-57)||(12116602-12116648)
chr4 (39-188)||(566084-566233)
chr4 (1-90)||(1537784-1537873)
chr4 (2-86)||(532186-532270)
chr4 (4-99)||(570335-570430)
chr4 (5-55)||(1600447-1600497)
chr4 (58-152)||(53761844-53761937)
[»] chr8 (9 HSPs)
chr8 (1-187)||(27922404-27922590)
chr8 (1-90)||(18315290-18315379)
chr8 (3-90)||(32151294-32151381)
chr8 (5-90)||(34936184-34936269)
chr8 (9-135)||(17628039-17628165)
chr8 (1-95)||(17636418-17636512)
chr8 (1-99)||(21235542-21235640)
chr8 (48-88)||(44736530-44736570)
chr8 (1-90)||(28246312-28246399)
[»] chr5 (6 HSPs)
chr5 (1-177)||(32267381-32267557)
chr5 (1-190)||(41901552-41901741)
chr5 (1-90)||(37937880-37937969)
chr5 (1-135)||(41889571-41889705)
chr5 (1-88)||(38267573-38267660)
chr5 (8-90)||(20478106-20478188)
[»] chr3 (6 HSPs)
chr3 (1-200)||(51113798-51113997)
chr3 (4-95)||(51120913-51121004)
chr3 (1-135)||(13470749-13470883)
chr3 (3-71)||(27005791-27005859)
chr3 (8-135)||(51764464-51764591)
chr3 (3-43)||(36811046-36811086)
[»] chr6 (25 HSPs)
chr6 (9-135)||(6585262-6585388)
chr6 (8-179)||(6394768-6394939)
chr6 (1-90)||(6432154-6432243)
chr6 (1-77)||(28935055-28935131)
chr6 (1-88)||(6402855-6402942)
chr6 (1-99)||(9411339-9411437)
chr6 (1-90)||(6409999-6410088)
chr6 (1-90)||(6415959-6416048)
chr6 (1-90)||(6423210-6423299)
chr6 (1-90)||(11936292-11936381)
chr6 (1-90)||(11948272-11948361)
chr6 (12-88)||(6603230-6603306)
chr6 (8-88)||(7119152-7119232)
chr6 (8-88)||(7131630-7131710)
chr6 (11-179)||(14818287-14818454)
chr6 (1-87)||(6594623-6594709)
chr6 (8-88)||(10579760-10579840)
chr6 (9-88)||(14802331-14802410)
chr6 (11-177)||(7994209-7994375)
chr6 (1-75)||(12102274-12102348)
chr6 (1-135)||(19632387-19632521)
chr6 (8-76)||(6596952-6597020)
chr6 (11-179)||(14820597-14820765)
chr6 (8-99)||(6426495-6426586)
chr6 (8-69)||(6589347-6589408)
[»] chr2 (3 HSPs)
chr2 (5-90)||(45245106-45245191)
chr2 (1-88)||(32785789-32785876)
chr2 (11-87)||(1037691-1037767)
[»] chr1 (7 HSPs)
chr1 (17-178)||(7554393-7554554)
chr1 (3-82)||(52082582-52082661)
chr1 (1-169)||(19468516-19468684)
chr1 (2-90)||(9586632-9586720)
chr1 (3-84)||(52092776-52092857)
chr1 (11-99)||(43634891-43634979)
chr1 (17-135)||(29718956-29719074)
[»] scaffold0295 (1 HSPs)
scaffold0295 (11-84)||(651-724)
[»] scaffold0041 (1 HSPs)
scaffold0041 (11-91)||(39176-39256)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-100)||(88822-88918)
[»] chr7 (2 HSPs)
chr7 (1-90)||(10614586-10614675)
chr7 (8-90)||(15092175-15092257)
[»] scaffold0807 (1 HSPs)
scaffold0807 (11-76)||(1491-1559)


Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 1548441 - 1548647
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  1548441 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgttgtgggcttttgcacttgttacaa 1548540  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttggaaggttgttttcaattgcatg 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1548541 aaacgttgtaaaaatatcacagagaagggagtgaaacatatagaagaaaactgctcgcaactgagagaaattaatttggaaggttgttttcaattgcatg 1548640  T
Q  201 atgatgt 207  Q
    |||||||    
T  1548641 atgatgt 1548647  T

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Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 1552784 - 1552973
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||    
T  1552784 tcccaaactggaagtgttgaatttgtcacatacaaatattaatgatgaaacactcaatgtgatatcaaagaattgtcgtgggcttttgcagctgttacta 1552883  T
Q  101 aaacgttgta---aaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttggaaggttgt 187  Q
     |||  ||||   |  || |||| |||||||||||||| ||| | | |||||| | || |||||| ||||| || |||||| ||||||||    
T  1552884 gaacaatgtaattattatgtcaccgagaagggagtgaagcatgtcggagaaaattgcttgcaactaagagagatcaatttgaaaggttgt 1552973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 1524511 - 1524592
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  1524511 tggaggtgttgaatttgtcacgtacaagtgttgatgatgaaacactctatatgatctcacagagttgtcgtgggcttttgca 1524592  T

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Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 8187110 - 8187206
Alignment:
Q  3 ccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |||||||  |||  || |||||||||||| ||||||||||||| ||||||||    
T  8187110 ccaaactggaggtgttgaacttgtcacatacaagagttgatgataaaacactttatgcaatttcaaagagttgttgtgggcttttgcagttgttact 8187206  T

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Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 546987 - 546897
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||||||| |||||||||||| ||||| | |  |||||||||||||| |||||||||||||||||||| ||||||||||| | ||||||||    
T  546987 tggaggtggtgaacttgtcacgtacaattgtcaatgatgaaacactctatgtgatctcaaagagttgttgtgggcttttggaattgttact 546897  T

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Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 553558 - 553472
Alignment:
Q  4 caaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||| |||| |||||||| ||||||||||||  ||||||||||||    
T  553558 caaactggaggtgttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgca 553472  T

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Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1513424 - 1513513
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||| || |||||||||||||||  ||||| | ||||||||||||||||| | || ||||||||| |||||||||||||||||||    
T  1513424 tcccaaactagaagtgttgaacttgtcatttacaaatgttgatgatgaaacactctacgtaatctcaaagtgttgtcgtgggcttttgca 1513513  T

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Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 1508021 - 1508109
Alignment:
Q  2 cccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||||| || |||||||||||||||||||| | | ||||||||||||||||   ||| ||||||||| |||||||||||||||||||    
T  1508021 cccaaactagaagtgttgaacttgtcacataccaatgttgatgatgaaacactgtgtgtaatctcaaagtgttgtcgtgggcttttgca 1508109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 55908755 - 55908831
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggctttt 87  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| || |||||||||||| |||| ||||||||||    
T  55908755 gaggtgtttaacttgtcacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtgggctttt 55908831  T

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Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 558568 - 558493
Alignment:
Q  13 ggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||||||||||||||   |||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  558568 ggtgttgaacttgtcattaacatatattgatgatgaagcactccatgtgatctcaaagagttgtcgtgggcttttg 558493  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 3438591 - 3438716
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttg 108  Q
    ||||||| |||| |||||||||||||||  |||||||| ||| |||| |||| ||||||||||||||| |||||||||||||  |||||||  ||  |||    
T  3438591 tggaggtattgagcttgtcacatacaagagttgatgat-aaatactccatgtaatctcaaagagttgttgtgggcttttgcaactgttactggaattttg 3438689  T
Q  109 taaaaatatcacagagaagggagtgaa 135  Q
    ||||  | |||||| ||||||||||||    
T  3438690 taaaggtgtcacagtgaagggagtgaa 3438716  T

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Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12121474 - 12121563
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||| || ||||||||||||||| |||||| | |||||||||||||||||   || ||||||||| |||| ||||||||||||||    
T  12121474 tcccaaactagaagtgttgaacttgtcatatacaaatgttgatgatgaaacactctccgtaatctcaaagtgttgccgtgggcttttgca 12121563  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 8184051 - 8184134
Alignment:
Q  5 aaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||| ||||||||||||||||||||||||||  ||||||||  | ||||| |||  ||||||||||||||| |||||||||||    
T  8184051 aaactagaggtgttgaacttgtcacatacaagagttgatgatatagcactctatgcaatctcaaagagttgttgtgggcttttg 8184134  T

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Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 640989 - 640899
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||| | |||| |||||||| ||| ||||| ||||||||  |||||||    
T  640989 tggaggtgttgaacttgtcagatacaaacgttgatgatgaaacactctacgtgacctcaaagaattgccgtggtcttttgcatctgttact 640899  T

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Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 659791 - 659726
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaa 68  Q
    ||||||||| ||||||||||||||||||||||||||| || || ||||||||||  ||||||||||||    
T  659791 tcccaaactagaggtgttgaacttgtcacatacaagtgttaataatgaaacact--atgtgatctcaa 659726  T

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Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1519159 - 1519227
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaa 69  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||  || ||||| |||||||||||||    
T  1519159 tcccaaactagaggtgttgaacttgtcacatacaagggttgatgaataagcactctatgtgatctcaaa 1519227  T

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Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 55505130 - 55505221
Alignment:
Q  6 aactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgtta 97  Q
    |||| |||||||||||||||||| ||||||   |||| |||| ||||||  |||||| |||||||| ||||||||| |||||||| ||||||    
T  55505130 aactagaggtgttgaacttgtcatatacaaaggttgacgatggaacactttatgtgacctcaaagaattgtcgtggacttttgcatttgtta 55505221  T

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Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7307942 - 7307844
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    ||||||| ||||||| |||||||||||| |||||    ||||||||||| ||||   | ||||||||||||||||| || ||||||||||| |||||||    
T  7307942 tcccaaattggaggtattgaacttgtcatatacagaagttgatgatgaagcactacgtatgatctcaaagagttgttgtaggcttttgcacctgttact 7307844  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 12116602 - 12116648
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaa 57  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  12116602 gaggtgttgaacttgtcacatacaagtgttgatgatgaatcactcaa 12116648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 566233 - 566084
Alignment:
Q  39 ttgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgtaaaaatatcacagagaagggagtgaacca 138  Q
    ||||||||||||||||| ||||||||||||||   |||||||||||||||||  ||| |||  ||  |  | ||||| | ||||||||||||||||| ||    
T  566233 ttgatgatgaaacactctatgtgatctcaaagtactgtcgtgggcttttgcagctgtcactgcaatataatcaaaatgttacagagaagggagtgaaaca 566134  T
Q  139 tatagaagaaaactcctcgcaactgagagaaattaatttggaaggttgtt 188  Q
      | |  ||||||| | | |||||||||||||| || ||||| |||||||    
T  566133 cctggtggaaaactgcacacaactgagagaaatcaagttggagggttgtt 566084  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1537784 - 1537873
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||| || ||||||||||||||| |||||| | || ||||  |||||||   ||| ||||||||| |||||||||||||||||||    
T  1537784 tcccaaactagaagtgttgaacttgtcatatacaaatgttaatgacaaaacactgtgtgtaatctcaaagtgttgtcgtgggcttttgca 1537873  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 532270 - 532186
Alignment:
Q  2 cccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttt 86  Q
    ||||| || |||||||||||||||||| ||||||  |||||||||||||  ||  |||||| |||||||| |||||||| |||||    
T  532270 cccaagctagaggtgttgaacttgtcatatacaaacattgatgatgaaaagctttatgtgacctcaaagaattgtcgtgagcttt 532186  T

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Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 570430 - 570335
Alignment:
Q  4 caaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||||| |||||||||||||||||| ||||| |  ||||| | |||  |||| || |||| |||||||||||||| |||||||||||  |||||||    
T  570430 caaactcgaggtgttgaacttgtcatatacaggagttgataacgaagaactctatctgatttcaaagagttgtcgcgggcttttgcaactgttact 570335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 1600497 - 1600447
Alignment:
Q  5 aaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactc 55  Q
    |||||||||||||||||||||||| |||||||  |||| |||||| |||||    
T  1600497 aaactggaggtgttgaacttgtcatatacaagggttgacgatgaagcactc 1600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 53761844 - 53761937
Alignment:
Q  58 tgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaact 152  Q
    ||||||||| |||| ||||||||||||||||||  | ||||| |||| |||| | ||| |||| || ||||||||||| ||| | ||||||||||    
T  53761844 tgtgatctcgaagaattgtcgtgggcttttgca-atattactgaaacattgtgataatgtcacggacaagggagtgaaacatgtggaagaaaact 53761937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 27922590 - 27922404
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    ||||||| |||||||||||||||||||| |||||| | ||||||||||| ||||  || ||||||||||||||||| ||||||||||| | |||| |||     
T  27922590 tcccaaattggaggtgttgaacttgtcatatacaaatgttgatgatgaagcactttatatgatctcaaagagttgttgtgggcttttgaaattgtcactt 27922491  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttggaaggttgt 187  Q
     ||  ||||||  || ||||| ||||||||||||||||| | | |||||||| | | ||||||||| | |||| |||||| ||||||    
T  27922490 gaaaattgtaatgatttcacaaagaagggagtgaaccatgtggtagaaaactgcactcaactgagaaagattagtttggatggttgt 27922404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18315290 - 18315379
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  18315290 tcccaaactggaggtgttgaacttgtcacatacaaaagttgatgatgaagcactctatgtgatctcaaagagttgtcgtaggcttttgca 18315379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 32151381 - 32151294
Alignment:
Q  3 ccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||| ||||||||||| |||||||||  ||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  32151381 ccaatctggaggtgttaaacttgtcatgtacaaggtttgatgatgaaacactctatgtgatctcaaagagttgtagtgggcttttgca 32151294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 34936184 - 34936269
Alignment:
Q  5 aaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||| ||||||||| |||||||| |||||||  |||||||| |||||||| |||  ||| |||||||||||||||||||||||||    
T  34936184 aaactagaggtgttggacttgtcatatacaagagttgatgataaaacactctatgccatcgcaaagagttgtcgtgggcttttgca 34936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 17628039 - 17628165
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttg 108  Q
    ||||||||||||||||||||||||| ||  |||||||| || |||||  |||||||||||||| ||||  |||||| ||| |  | |||||| ||  |||    
T  17628039 tggaggtgttgaacttgtcacatactagagttgatgataaagcactccgtgtgatctcaaagaattgttttgggctcttgaaactattactagaattttg 17628138  T
Q  109 taaaaatatcacagagaagggagtgaa 135  Q
    ||||  | ||||||| |||||||||||    
T  17628139 taaaggtgtcacagacaagggagtgaa 17628165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17636418 - 17636512
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgt 95  Q
    ||||||| |||||||||||||||||||||| ||| |  |||| |||||| || |  ||||||||||||||||||||| | | |||||||| ||||    
T  17636418 tcccaaattggaggtgttgaacttgtcacaaacaggagttgacgatgaagcattgtatgtgatctcaaagagttgtcttagacttttgcaattgt 17636512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21235640 - 21235542
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||||||||||||||||||||||||||| ||||| |  ||||| | |||  |||| || |||| |||||||| |||||  ||||||||||  |||||||    
T  21235640 tcccaaactggaggtgttgaacttgtcatatacaggagttgataacgaagaactctatttgatttcaaagagctgtcgcaggcttttgcaactgttact 21235542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 44736570 - 44736530
Alignment:
Q  48 aaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  44736570 aaacactcattgtgatctcaaagagttgttgtgggcttttg 44736530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28246312 - 28246399
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||||||||||||| ||||||||  ||||||  ||||  || || ||||| ||  |||||||||||||||| | |||||||||||    
T  28246312 tcccaaactggaggtgttggacttgtcatttacaagagttga--ataaatcactctattggatctcaaagagttgtagcgggcttttgca 28246399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 32267557 - 32267381
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    ||||||| ||||||| |||||||||||||| ||||   ||||||||||| ||||  || ||||||||||||||||| ||||||||||| | |||| |||     
T  32267557 tcccaaattggaggtattgaacttgtcacaaacaatagttgatgatgaagcactttatatgatctcaaagagttgttgtgggcttttgaaattgtcactt 32267458  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaattt 177  Q
    |||  ||||||  |||||||| ||||||||||||| ||| ||| |||||||| | ||||||| ||| | ||||||||    
T  32267457 aaaaattgtaatgatatcacaaagaagggagtgaagcatgtagtagaaaactgcacgcaacttagaaagattaattt 32267381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 41901552 - 41901741
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||| ||||  || ||||||||||||||||| |||| |||||| | |||| |||     
T  41901552 tcccaaactggaggtgttgaacttgtcatatacaaaagttgatgatgaagcactttatatgatctcaaagagttgttgtggacttttgaaattgtcactt 41901651  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttggaaggttgtttt 190  Q
     ||  ||||||  || ||||| ||||||||||||| ||| | | ||||||||   ||||| ||||| | |||| |||| | |||||||||    
T  41901652 caagattgtaatgatgtcacaaagaagggagtgaagcatgtggtagaaaactgtacgcaattgagaaagattagtttgaatggttgtttt 41901741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37937969 - 37937880
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||| || ||||||||| ||||| |||||||||| ||||||||| |||||||| |||| ||||||||||  |||||||||||||||||    
T  37937969 tcccaaccttgaggtgttggacttgacacatacaagaattgatgatcaaacactctatgtaatctcaaagatgtgtcgtgggcttttgca 37937880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41889571 - 41889705
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    ||||||| |||||||||||||||| ||| ||||||   ||||||||||||||||  ||  |||||||||||||||| | ||||||| | | ||||||||     
T  41889571 tcccaaattggaggtgttgaacttatcatatacaaaagttgatgatgaaacactttataagatctcaaagagttgttgcgggctttcgaaattgttactt 41889670  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaa 135  Q
    |||  |||| |  || ||||| |||||||||||||    
T  41889671 aaaaattgttatgatgtcacaaagaagggagtgaa 41889705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38267573 - 38267660
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    |||||| || ||||||||| ||||| ||||||||||  |||||||||| |||||| |||| ||||||||||  || ||||||||||||    
T  38267573 tcccaaccttgaggtgttggacttgacacatacaagagttgatgatgacacactctatgtaatctcaaagacgtgccgtgggcttttg 38267660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 20478106 - 20478188
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||||||||||||||| |||||| | ||||||| |||||| |   ||||||||||| || |||| |||||||||||||    
T  20478106 ctggaggtgttgaacttgtcatatacaaatgttgatgacgaaacattatctgtgatctcaaggaattgttgtgggcttttgca 20478188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 51113798 - 51113997
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    ||||||||||||||||||  |||||||| ||||||   ||||||||||||||||| |||||||||| ||||||||| |||||||||||||  |||||||     
T  51113798 tcccaaactggaggtgttagacttgtcaaatacaatggttgatgatgaaacactctatgtgatctcgaagagttgttgtgggcttttgcaactgttactg 51113897  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttggaaggttgttttcaattgcatg 200  Q
    |||  |||| |  || ||||||||||||||||||| ||| | | |||||| | | |  |||| ||||| ||||||||  | ||||||||| || ||||||    
T  51113898 aaaaattgttaccatgtcacagagaagggagtgaagcatgtggtagaaaaatgcacaaaactaagagagattaatttaaagggttgttttaaagtgcatg 51113997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 51120913 - 51121004
Alignment:
Q  4 caaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgt 95  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||||| |||  |||| ||||||||||||||||||||||||||||| ||||    
T  51120913 caaattggaggtgttgaacttgtcgcatacaagagttgatgatgaaaaactatatgtaatctcaaagagttgtcgtgggcttttgcaattgt 51121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13470749 - 13470883
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||| ||||||||||||||||||||| ||||||   || ||||| |||||||| || |||||||||||| |||| |||||||||||||  | |||||     
T  13470749 tcccaatctggaggtgttgaacttgtcaaatacaaaggttaatgataaaacactctatatgatctcaaagaattgttgtgggcttttgcaactattactt 13470848  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaa 135  Q
     ||| |||| | ||| |||||||  ||||||||||    
T  13470849 gaactttgtcataatgtcacagaagagggagtgaa 13470883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 27005791 - 27005859
Alignment:
Q  3 ccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaaga 71  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||  ||||||  |||| ||||||||||    
T  27005791 ccaaactggaggtcttgaacttgtcacatacaagaattgataatacaacactttatgtaatctcaaaga 27005859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 51764464 - 51764591
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgtt 107  Q
    |||||||||||  ||||||||  |||||   |||||||| |||||||| ||| ||||||||||| |||| | |||||||||||  | |||||  ||| ||    
T  51764464 ctggaggtgttagacttgtcatttacaaaagttgatgataaaacactctatgcgatctcaaagaattgttgcgggcttttgcaactattactggaacatt 51764563  T
Q  108 gtaaaaatatcacagagaagggagtgaa 135  Q
    || | ||| |||  ||||||||||||||    
T  51764564 gtgataatgtcaaggagaagggagtgaa 51764591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 36811046 - 36811086
Alignment:
Q  3 ccaaactggaggtgttgaacttgtcacatacaagtattgat 43  Q
    ||||||||||||||||||||||||| ||| |||| ||||||    
T  36811046 ccaaactggaggtgttgaacttgtcccattcaagaattgat 36811086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 6585262 - 6585388
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttg 108  Q
    ||||||| |||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||||||  || ||||||| |  | ||||| ||| ||||    
T  6585262 tggaggtattgaacttgtcagatacaaaggttgatgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttg 6585361  T
Q  109 taaaaatatcacagagaagggagtgaa 135  Q
    | ||||| |||||||||||||| ||||    
T  6585362 tgaaaatgtcacagagaagggactgaa 6585388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 6394939 - 6394768
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgtt 107  Q
    ||||||||||||||||||||| |||||||  ||||||||||||| ||   |||||||||||||| |||| ||||||||||||| ||   |||  |   ||    
T  6394939 ctggaggtgttgaacttgtcaaatacaagcgttgatgatgaaactctttctgtgatctcaaagaattgttgtgggcttttgcaattacaacttgataatt 6394840  T
Q  108 gtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttgg 179  Q
    |||||||| ||||||| ||||| ||| | ||| | | |||||||| | | ||| ||||||| ||||||||||    
T  6394839 gtaaaaatgtcacagaaaagggtgtggaacatgtggtagaaaactgcacacaattgagagagattaatttgg 6394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6432243 - 6432154
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||| ||| ||||||||||||||||| |||||||  ||||||||||||||||  ||||||||| ||||| |||| |||||||| ||||    
T  6432243 tcccaagctgaaggtgttgaacttgtcaaatacaagcgttgatgatgaaacactttatgtgatcttaaagaattgttgtgggcttctgca 6432154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28935131 - 28935055
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtc 77  Q
    |||| |||| ||||||||||||||||||||||||||  |||| |||||| |||||| |||||| |||||||||||||    
T  28935131 tccccaactcgaggtgttgaacttgtcacatacaagagttgacgatgaagcactcagtgtgatttcaaagagttgtc 28935055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6402942 - 6402855
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    |||| |||| || ||||||||||||||| |||| |   ||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  6402942 tccccaactagaagtgttgaacttgtcagatacgaaggttgatgatgaaacactctatgtgatctcaaagaattgtagtgggcttttg 6402855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9411437 - 9411339
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||||| ||||||||||||||||||||| ||||| || ||   ||||||| |||| ||| ||||||||||| ||||||||| ||||||||  |||||||    
T  9411437 tcccaagctggaggtgttgaacttgtcatatacaggtgttttcgatgaaatactctatgagatctcaaagaattgtcgtggacttttgcaactgttact 9411339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6410088 - 6409999
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||| ||| |||||||||||| |||| |||||||  ||||||||||||| ||  ||||||||||||||| |||| || ||||||||||    
T  6410088 tcccaagctgaaggtgttgaactagtcaaatacaagcgttgatgatgaaactctttatgtgatctcaaagaattgttgtcggcttttgca 6409999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6416048 - 6415959
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||| ||||||||||||||||||||| ||||||   || ||||| |||| ||| ||||||||||||||| |||| | |||||||||||    
T  6416048 tcccaacctggaggtgttgaacttgtcaaatacaaaggttaatgataaaactctctatgtgatctcaaagaattgtagcgggcttttgca 6415959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6423299 - 6423210
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||| ||||||||||||||||||||| |||||||  ||   ||| |||||||| ||| |||||||||||||||| ||||| |||||||    
T  6423299 tcccaagctggaggtgttgaacttgtcaaatacaagagttagcgataaaacactctatgcgatctcaaagagttgttgtgggattttgca 6423210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11936292 - 11936381
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||||||||||||| ||||||||  ||||||  |||| ||| || ||||| ||  |||||||||||||||| |||||||||||||    
T  11936292 tcccaaactggaggtgttggacttgtcatttacaagagttgacgataaatcactctattggatctcaaagagttgtagtgggcttttgca 11936381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11948272 - 11948361
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||||||||||||||||| ||||||||  ||||||  |||| ||| || ||||| ||  |||||||||||||||| |||||||||||||    
T  11948272 tcccaaactggaggtgttggacttgtcatttacaagagttgacgataaatcactctattggatctcaaagagttgtagtgggcttttgca 11948361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 6603230 - 6603306
Alignment:
Q  12 aggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    |||||||| ||||| || ||||| || |||||||||||||| || ||| ||||||||||||||||| ||||||||||    
T  6603230 aggtgttggacttggcagatacaggtgttgatgatgaaacagtctatgcgatctcaaagagttgtcctgggcttttg 6603306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 7119232 - 7119152
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||||||||||||||||||| |||| |   ||||||||||||||||| |||||||||| |||| |||| | |||||||||    
T  7119232 ctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttg 7119152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 7131710 - 7131630
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||||||||||||||||||| |||| |   ||||||||||||||||| |||||||||| |||| |||| | |||||||||    
T  7131710 ctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttg 7131630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 14818454 - 14818287
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgta 110  Q
    |||||||||||||| ||| ||||||   ||||| ||||||||||  || ||||||| |||| ||||  |||||||||||  || |||||  ||  |||||    
T  14818454 gaggtgttgaacttatcaaatacaaaggttgataatgaaacactttatatgatctccaagaattgttctgggcttttgcgattattacttgaaaattgta 14818355  T
Q  111 aaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttgg 179  Q
    | ||| ||||||||||||| ||||| ||| ||| |||||||| | | || ||||||| |||||||||||    
T  14818354 ataatgtcacagagaagggtgtgaaacatgtagtagaaaactgcacacagctgagag-aattaatttgg 14818287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6594623 - 6594709
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggctttt 87  Q
    ||||||||||||||||||| |||||||| |||||    |||||||||| |||||   |||||||||||||| |||| ||||||||||    
T  6594623 tcccaaactggaggtgttgtacttgtcaaatacagaggttgatgatgagacactacgtgtgatctcaaagaattgttgtgggctttt 6594709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 10579760 - 10579840
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||||||||||||||||||| ||||||   |||||||| |||||||| ||  ||||||||||| |||| || ||||||||    
T  10579760 ctggaggtgttgaacttgtcatatacaaaagttgatgataaaacactctattcgatctcaaagaattgttgtcggcttttg 10579840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 14802410 - 14802331
Alignment:
Q  9 tggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    |||| |||||||| |||||| ||||||   ||||||||||||||||| ||||||| ||||||| |||| |||| ||||||    
T  14802410 tggaagtgttgaatttgtcaaatacaaaggttgatgatgaaacactctatgtgatttcaaagaattgttgtggtcttttg 14802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 7994209 - 7994375
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgta 110  Q
    |||||||||||| ||||| |||||||  || |||| ||||||||  ||||||||||||||| ||||  ||| ||||||||  | |||||  ||| |||||    
T  7994209 gaggtgttgaacatgtcaaatacaagggttaatgacgaaacactatatgtgatctcaaagaattgttctggacttttgcaactattacttgaactttgta 7994308  T
Q  111 aaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaattt 177  Q
    |  || | || ||| |||||||||| ||| | | |||||||| | ||||||||| ||| ||| ||||    
T  7994309 atgatgttaccgaggagggagtgaaacatgtggtagaaaactgcacgcaactgaaagagatttattt 7994375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12102348 - 12102274
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttg 75  Q
    |||||||||||||||||||||||||||||||||| |  ||||| | |||  |||| || |||| |||||||||||    
T  12102348 tcccaaactggaggtgttgaacttgtcacatacatgagttgataacgaagaactctatctgatttcaaagagttg 12102274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19632521 - 19632387
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||| || ||||||||| |||||||  ||||||   ||||||||||   |||   |||||||||||||| |||| |||||||||||||  | |||||     
T  19632521 tcccaagctagaggtgttggacttgtcgtatacaaaggttgatgatgagcaactttttgtgatctcaaagaattgttgtgggcttttgcaactcttactg 19632422  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaa 135  Q
    |||  ||||   |||||||||||||||||||||||    
T  19632421 aaaaattgtgctaatatcacagagaagggagtgaa 19632387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 6596952 - 6597020
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgt 76  Q
    |||||||||||||||||||||  ||||| | ||||||||||||||||| | |  |||||||||| ||||    
T  6596952 ctggaggtgttgaacttgtcaagtacaaatgttgatgatgaaacactctacgctatctcaaagaattgt 6597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 14820765 - 14820597
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgta 110  Q
    |||||||||||||| ||| ||||||   ||||| ||||||||||  || ||||||| |||| |||| ||||||||||||  || |||||  ||   ||||    
T  14820765 gaggtgttgaacttatcaaatacaaaggttgataatgaaacactttatatgatctccaagaattgttgtgggcttttgcgattattacttgaaaaatgta 14820666  T
Q  111 aaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttgg 179  Q
    |  || ||||||||||||| ||||| ||| | | | |||||| | | || |||||||| ||||||||||    
T  14820665 atgatgtcacagagaagggtgtgaaacatgtggtaaaaaactgcacacagctgagagagattaatttgg 14820597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 6426586 - 6426495
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||||||||||||| |||||| | ||||| ||||||||||||||  |  ||| ||||||||||| |||| || || ||||||| || |||||    
T  6426586 ctggaggtgttgaatttgtcaaacacaagcattgatgatgaaactttttatgcgatctcaaagaattgttgtcggattttgcaattattact 6426495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 6589347 - 6589408
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaa 69  Q
    ||||||||||||||||||||| |||||| | || ||||| |||||||  || ||||||||||    
T  6589347 ctggaggtgttgaacttgtcaaatacaaatgttaatgataaaacactatatctgatctcaaa 6589408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 45245106 - 45245191
Alignment:
Q  5 aaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||| ||||||||||| |||||| | ||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45245106 aaacttgaggtgttgaatttgtcagagacaatggttgatgatgaaacactccatgtgatctcaaagagttgtcgtgggcttttgca 45245191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32785789 - 32785876
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttg 88  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||  |||| || ||||||||||    
T  32785789 tcccaaactagaggtgttgaacttgtcacatacaagaattgatgatgaagcactttatgtgatctcaataagttttcatgggcttttg 32785876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 1037691 - 1037767
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggctttt 87  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| || |||||||||||| |||| ||||||||||    
T  1037691 gaggtgtttaacttgtcacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtgggctttt 1037767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 7554554 - 7554393
Alignment:
Q  17 ttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgtaaaaata 116  Q
    |||||||| ||| |||||||| ||||||||||| ||||| || ||||||||||||||||| |||| ||||| ||  ||||||| ||| | ||| | |||     
T  7554554 ttgaacttatcatatacaagtgttgatgatgaagcactctatatgatctcaaagagttgtggtggacttttacaactgttactgaaaggatgtgataatg 7554455  T
Q  117 tcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaaattaatttg 178  Q
    ||||||| ||||||||||| ||| | | |||||||| | ||| ||| | ||| |||||||||    
T  7554454 tcacagaaaagggagtgaagcatgtggtagaaaactgcacgctactcaaagagattaatttg 7554393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 52082661 - 52082582
Alignment:
Q  3 ccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtggg 82  Q
    ||||| |||||||||||||||||||| | ||||  ||||||||||||||| |  |||||||||||||||||||| |||||    
T  52082661 ccaaattggaggtgttgaacttgtcaaagacaaaaattgatgatgaaacattgtatgtgatctcaaagagttgttgtggg 52082582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19468516 - 19468684
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||| |||||||||||||| |||||| ||||||   ||||||||||||||||  |||||||||||||||  ||| |||| |||||| | || ||  |     
T  19468516 tcccaagctggaggtgttgaagttgtcagatacaaaggttgatgatgaaacactttatgtgatctcaaagaactgttgtggacttttggaattatttgtg 19468615  T
Q  101 aaacgttgtaaaaatatcacagagaagggagtgaaccatatagaagaaaactcctcgcaactgagagaa 169  Q
     |  |||||||  || |||||||||| |||||||| ||| |  ||||||| | ||| ||||||||||||    
T  19468616 gacggttgtaatgatgtcacagagaaaggagtgaaacatgtgaaagaaaattgctcacaactgagagaa 19468684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 9586720 - 9586632
Alignment:
Q  2 cccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    ||||| || |||||||||||||||||| |||||  | || |||||||||||||  |||||| ||||| || ||||||||| ||||||||    
T  9586720 cccaagctagaggtgttgaacttgtcatatacagatgttaatgatgaaacactttatgtgacctcaatgaattgtcgtggacttttgca 9586632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 52092857 - 52092776
Alignment:
Q  3 ccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggct 84  Q
    ||||| ||||||||||||||||| || | ||||  ||||||||||| ||| |  |||||||||||||||||| | |||||||    
T  52092857 ccaaattggaggtgttgaacttggcaaagacaaaaattgatgatgacacattgtatgtgatctcaaagagtttttgtgggct 52092776  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 43634979 - 43634891
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttact 99  Q
    |||| ||||||||||||| ||||||   |||| |||| ||||||  |||||| |||||||| ||||||||| |||||| | ||||||||    
T  43634979 gaggcgttgaacttgtcatatacaaaggttgacgatggaacactttatgtgacctcaaagaattgtcgtggacttttgaatttgttact 43634891  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 29718956 - 29719074
Alignment:
Q  17 ttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttactaaaacgttgtaaaaata 116  Q
    |||||||||||| |||| |   |||||||| || ||||| || | || |||| ||||||| |||| |||||||| ||||||||  || ||||||  |||     
T  29718956 ttgaacttgtcatataccaacgttgatgataaatcactccatatcatatcaacgagttgttgtggccttttgcaattgttactggaaagttgtatgaatg 29719055  T
Q  117 tcacagagaagggagtgaa 135  Q
    |||||||||| ||||||||    
T  29719056 tcacagagaatggagtgaa 29719074  T

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Target: scaffold0295 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 651 - 724
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggct 84  Q
    |||||||| |||||||||||||||||| | ||||||||||||||| || ||||||| |||| |||| |||||||    
T  651 gaggtgtttaacttgtcacatacaagtgtcgatgatgaaacactctatatgatctcgaagaattgttgtgggct 724  T

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Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 39256 - 39176
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcac 91  Q
    ||||||||||||||| ||  |||||   || |||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  39256 gaggtgttgaacttgacatttacaaaggttaatgatgaaacactttatgtgatctcaaagagttgtagtgggcttttgcac 39176  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 88918 - 88822
Alignment:
Q  4 caaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgcacttgttacta 100  Q
    |||||||||||| ||||||||||||   ||||  || || |||||| ||||| |||||||||||||||| |||| |||||||||||| |||| ||||    
T  88918 caaactggaggtattgaacttgtcaagaacaatcatagacgatgaagcactccatgtgatctcaaagaggtgtcatgggcttttgcaattgtaacta 88822  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10614675 - 10614586
Alignment:
Q  1 tcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||| ||||||||||||||||||||| |||| |   || ||||| |||||||| |||||||||| ||||  ||| |||||||||||||    
T  10614675 tcccaatctggaggtgttgaacttgtcaaatacgaaggttaatgataaaacactctatgtgatctcgaagaactgtagtgggcttttgca 10614586  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 15092175 - 15092257
Alignment:
Q  8 ctggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgtcgtgggcttttgca 90  Q
    |||||||||||||| |||||| | ||||   || ||||| |||||||| ||| ||||||||||| |||| |||||||||||||    
T  15092175 ctggaggtgttgaatttgtcagaaacaaaggttaatgataaaacactctatgcgatctcaaagaattgttgtgggcttttgca 15092257  T

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Target: scaffold0807 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 1491 - 1559
Alignment:
Q  11 gaggtgttgaacttgtcacatacaagtattgat---gatgaaacactcaatgtgatctcaaagagttgt 76  Q
    ||||||||| |||||||| |||||| | |||||   |||||||||||| ||||||||||||||| ||||    
T  1491 gaggtgttggacttgtcaaatacaaatgttgatgatgatgaaacactctatgtgatctcaaagaattgt 1559  T

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