View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2442_high_15 (Length: 297)
Name: NF2442_high_15
Description: NF2442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2442_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 25109616 - 25109790
Alignment:
| Q |
1 |
ctccaatatgttcgccctttggttatgccggatcttcaagtaaccttctgcatttagggactttactaggactccaatatctgcatttactaacccaaca |
100 |
Q |
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| T |
25109616 |
ctccaatatgttcgccctttggttatgccggatcttcaagtaaccttctgcatttagggactttactaggactccaatatctgcatttactaacccaaca |
25109715 |
T |
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| Q |
101 |
tacattcattcaataattacacactagtctaccttgtcaaaaattgaaattatacattagtcttcattggcaccc |
175 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25109716 |
tacattcattcaataattacacactagtctaccttgtcaaaaattgaaattatacattagtcttcattggcaccc |
25109790 |
T |
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