View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2444_high_4 (Length: 249)

Name: NF2444_high_4
Description: NF2444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2444_high_4
NF2444_high_4
[»] chr5 (30 HSPs)
chr5 (1-235)||(35798349-35798597)
chr5 (4-112)||(31861641-31861751)
chr5 (4-114)||(42119205-42119314)
chr5 (40-114)||(38482348-38482422)
chr5 (1-112)||(40339363-40339475)
chr5 (1-114)||(24098577-24098690)
chr5 (4-92)||(33052868-33052958)
chr5 (1-114)||(39418864-39418978)
chr5 (1-92)||(12382877-12382971)
chr5 (5-84)||(39153540-39153621)
chr5 (16-92)||(24098485-24098561)
chr5 (36-91)||(31861544-31861599)
chr5 (4-114)||(37204896-37205007)
chr5 (36-114)||(9227033-9227111)
chr5 (16-114)||(21149027-21149128)
chr5 (16-114)||(21148830-21148929)
chr5 (6-78)||(22642185-22642256)
chr5 (45-112)||(35030875-35030942)
chr5 (36-91)||(20688848-20688903)
chr5 (34-112)||(26592354-26592433)
chr5 (4-91)||(20688946-20689033)
chr5 (16-112)||(22551676-22551772)
chr5 (16-114)||(35798610-35798710)
chr5 (1-81)||(33483037-33483120)
chr5 (27-83)||(36354722-36354779)
chr5 (46-95)||(8388662-8388711)
chr5 (37-89)||(11664128-11664179)
chr5 (16-114)||(20698448-20698547)
chr5 (35-83)||(24329464-24329512)
chr5 (1-54)||(26034938-26034993)
[»] chr2 (35 HSPs)
chr2 (4-114)||(28149464-28149576)
chr2 (1-114)||(37147697-37147812)
chr2 (16-112)||(29098051-29098146)
chr2 (1-90)||(16577262-16577352)
chr2 (5-114)||(28110283-28110392)
chr2 (4-92)||(1498938-1499027)
chr2 (4-114)||(28484507-28484619)
chr2 (4-112)||(38625053-38625160)
chr2 (37-91)||(3364511-3364565)
chr2 (4-114)||(22535598-22535710)
chr2 (36-114)||(30371415-30371493)
chr2 (40-114)||(38210894-38210968)
chr2 (1-83)||(3364388-3364471)
chr2 (4-111)||(9011899-9012009)
chr2 (36-91)||(16577168-16577223)
chr2 (37-114)||(38385965-38386040)
chr2 (36-89)||(28484414-28484467)
chr2 (4-83)||(39227942-39228023)
chr2 (1-88)||(23260375-23260463)
chr2 (16-114)||(28149594-28149693)
chr2 (39-114)||(1499065-1499140)
chr2 (8-112)||(17328244-17328350)
chr2 (4-91)||(18665729-18665818)
chr2 (39-94)||(37243470-37243525)
chr2 (4-92)||(38386077-38386166)
chr2 (4-114)||(25227854-25227967)
chr2 (8-114)||(29098168-29098277)
chr2 (36-92)||(85491-85548)
chr2 (37-114)||(17328122-17328199)
chr2 (1-56)||(2809703-2809759)
chr2 (36-92)||(9011808-9011864)
chr2 (4-55)||(19493335-19493387)
chr2 (9-112)||(19052092-19052198)
chr2 (1-81)||(85584-85666)
chr2 (16-91)||(22535506-22535581)
[»] chr4 (40 HSPs)
chr4 (1-114)||(56467560-56467674)
chr4 (1-114)||(21798363-21798477)
chr4 (4-109)||(43751195-43751302)
chr4 (1-112)||(9791557-9791669)
chr4 (1-114)||(18454341-18454456)
chr4 (36-114)||(16493670-16493748)
chr4 (4-114)||(17289891-17290003)
chr4 (1-92)||(21780173-21780267)
chr4 (36-114)||(16493548-16493626)
chr4 (36-114)||(17289773-17289851)
chr4 (1-65)||(1386083-1386148)
chr4 (18-90)||(44561505-44561578)
chr4 (1-109)||(56216857-56216965)
chr4 (36-92)||(1386187-1386243)
chr4 (36-93)||(9001495-9001552)
chr4 (36-92)||(17313009-17313065)
chr4 (36-92)||(39868520-39868576)
chr4 (16-91)||(47321039-47321114)
chr4 (36-114)||(18454223-18454302)
chr4 (16-114)||(21780283-21780382)
chr4 (4-90)||(39868613-39868700)
chr4 (36-114)||(53231803-53231882)
chr4 (16-114)||(56467445-56467543)
chr4 (16-92)||(22272982-22273059)
chr4 (16-112)||(51396191-51396286)
chr4 (36-92)||(45900734-45900790)
chr4 (1-61)||(11563439-11563501)
chr4 (45-92)||(21798524-21798571)
chr4 (36-114)||(44519642-44519721)
chr4 (36-91)||(16482107-16482163)
chr4 (40-92)||(40696161-40696213)
chr4 (36-114)||(13334853-13334932)
chr4 (9-65)||(18320541-18320599)
chr4 (16-117)||(44519484-44519587)
chr4 (36-114)||(43318570-43318647)
chr4 (4-83)||(45900612-45900693)
chr4 (11-92)||(55363740-55363822)
chr4 (38-83)||(18437176-18437220)
chr4 (16-64)||(43751126-43751175)
chr4 (36-92)||(11563345-11563400)
[»] chr7 (50 HSPs)
chr7 (4-114)||(38193110-38193221)
chr7 (1-108)||(1693365-1693472)
chr7 (4-111)||(35913198-35913308)
chr7 (4-91)||(26930687-26930775)
chr7 (1-114)||(19410540-19410656)
chr7 (6-91)||(44413999-44414083)
chr7 (4-114)||(13279214-13279327)
chr7 (4-114)||(13286779-13286892)
chr7 (37-114)||(5021730-5021807)
chr7 (1-92)||(16902250-16902343)
chr7 (4-114)||(23784614-23784724)
chr7 (1-114)||(31186816-31186932)
chr7 (16-92)||(43251563-43251639)
chr7 (1-92)||(4518012-4518106)
chr7 (36-114)||(19272250-19272326)
chr7 (9-91)||(19979704-19979786)
chr7 (6-65)||(34857661-34857720)
chr7 (4-92)||(23314775-23314865)
chr7 (1-114)||(23371479-23371591)
chr7 (4-92)||(19979793-19979884)
chr7 (16-90)||(23371608-23371683)
chr7 (28-114)||(24204843-24204930)
chr7 (36-114)||(16902134-16902212)
chr7 (36-92)||(19410701-19410757)
chr7 (36-91)||(21298066-21298122)
chr7 (35-83)||(23784761-23784808)
chr7 (4-92)||(26050320-26050411)
chr7 (4-92)||(26059679-26059770)
chr7 (38-114)||(39580119-39580193)
chr7 (5-65)||(12814671-12814733)
chr7 (37-92)||(13279367-13279422)
chr7 (4-83)||(21298159-21298241)
chr7 (4-83)||(24205266-24205348)
chr7 (4-83)||(24206784-24206866)
chr7 (36-94)||(31186718-31186777)
chr7 (36-87)||(38193018-38193069)
chr7 (59-114)||(45164091-45164146)
chr7 (1-83)||(43251655-43251740)
chr7 (17-92)||(39119039-39119116)
chr7 (4-63)||(24555786-24555846)
chr7 (4-89)||(39118932-39119019)
chr7 (4-91)||(19272365-19272453)
chr7 (16-65)||(26050252-26050302)
chr7 (16-65)||(26059611-26059661)
chr7 (4-61)||(48104585-48104643)
chr7 (36-92)||(1693269-1693326)
chr7 (36-92)||(45163964-45164021)
chr7 (1-64)||(29141036-29141097)
chr7 (45-92)||(35913101-35913149)
chr7 (16-94)||(48104656-48104736)
[»] scaffold0031 (2 HSPs)
scaffold0031 (4-114)||(1973-2086)
scaffold0031 (16-114)||(1857-1954)
[»] chr8 (27 HSPs)
chr8 (1-83)||(26447497-26447579)
chr8 (5-114)||(34019041-34019151)
chr8 (4-112)||(43121112-43121221)
chr8 (1-117)||(4105077-4105192)
chr8 (36-101)||(7988972-7989037)
chr8 (4-102)||(7988835-7988933)
chr8 (9-87)||(12330488-12330566)
chr8 (36-112)||(27198324-27198400)
chr8 (1-111)||(27987442-27987550)
chr8 (1-111)||(28044744-28044852)
chr8 (4-112)||(40770674-40770781)
chr8 (16-114)||(4105208-4105307)
chr8 (1-92)||(25601765-25601859)
chr8 (36-114)||(14329549-14329627)
chr8 (4-65)||(34985268-34985329)
chr8 (4-92)||(960322-960412)
chr8 (4-114)||(29726136-29726246)
chr8 (4-114)||(38500314-38500426)
chr8 (37-92)||(8315934-8315988)
chr8 (45-112)||(14329409-14329475)
chr8 (1-64)||(43945312-43945377)
chr8 (36-92)||(27198196-27198253)
chr8 (36-92)||(25601897-25601953)
chr8 (4-81)||(2696666-2696742)
chr8 (4-114)||(25277622-25277733)
chr8 (16-90)||(34985174-34985249)
chr8 (36-92)||(12330385-12330441)
[»] chr3 (37 HSPs)
chr3 (4-114)||(3548151-3548264)
chr3 (4-114)||(49872745-49872857)
chr3 (4-114)||(22949396-22949509)
chr3 (4-114)||(30586193-30586306)
chr3 (4-93)||(46901923-46902013)
chr3 (4-114)||(36867667-36867778)
chr3 (4-114)||(27760319-27760431)
chr3 (16-114)||(30586324-30586425)
chr3 (4-92)||(12767083-12767172)
chr3 (5-83)||(25109891-25109970)
chr3 (36-114)||(19623959-19624037)
chr3 (6-112)||(30271695-30271802)
chr3 (1-114)||(51252195-51252311)
chr3 (8-114)||(5416091-5416198)
chr3 (1-120)||(43767804-43767925)
chr3 (4-110)||(7584285-7584388)
chr3 (36-114)||(30271574-30271652)
chr3 (36-92)||(3548304-3548361)
chr3 (37-90)||(5417217-5417270)
chr3 (16-114)||(25109989-25110088)
chr3 (45-92)||(19623877-19623924)
chr3 (36-114)||(22949276-22949355)
chr3 (9-90)||(10979901-10979982)
chr3 (36-92)||(27432768-27432825)
chr3 (46-114)||(36867815-36867884)
chr3 (1-51)||(3072508-3072559)
chr3 (4-114)||(7118118-7118229)
chr3 (36-114)||(29313818-29313894)
chr3 (4-92)||(29313929-29314020)
chr3 (36-114)||(49872898-49872976)
chr3 (4-63)||(14248730-14248791)
chr3 (37-91)||(46902053-46902107)
chr3 (16-92)||(27760449-27760526)
chr3 (16-92)||(43767712-43767789)
chr3 (4-92)||(44172900-44172991)
chr3 (4-92)||(44179600-44179691)
chr3 (4-51)||(47117478-47117526)
[»] chr1 (31 HSPs)
chr1 (4-114)||(31532405-31532517)
chr1 (1-114)||(9043587-9043701)
chr1 (29-114)||(46561417-46561500)
chr1 (4-112)||(4646789-4646900)
chr1 (1-83)||(46136147-46136230)
chr1 (11-89)||(5330576-5330656)
chr1 (4-112)||(7112637-7112746)
chr1 (4-114)||(21853446-21853556)
chr1 (4-112)||(47021869-47021978)
chr1 (10-83)||(5348290-5348365)
chr1 (1-90)||(16699017-16699108)
chr1 (4-111)||(27794508-27794617)
chr1 (16-102)||(5330462-5330550)
chr1 (6-83)||(13154640-13154719)
chr1 (16-114)||(47021998-47022096)
chr1 (4-114)||(36343301-36343411)
chr1 (36-92)||(27794409-27794466)
chr1 (9-114)||(28411067-28411174)
chr1 (36-92)||(6540867-6540923)
chr1 (4-65)||(42736668-42736731)
chr1 (4-93)||(51904030-51904121)
chr1 (4-64)||(28724376-28724438)
chr1 (1-91)||(40498073-40498166)
chr1 (35-92)||(21853947-21854004)
chr1 (36-92)||(28724478-28724535)
chr1 (40-93)||(50596114-50596167)
chr1 (53-114)||(15790438-15790499)
chr1 (36-114)||(35167957-35168035)
chr1 (8-65)||(44826235-44826293)
chr1 (16-65)||(15336435-15336486)
chr1 (45-92)||(16698921-16698969)
[»] scaffold0113 (2 HSPs)
scaffold0113 (16-103)||(28811-28899)
scaffold0113 (36-114)||(28101-28179)
[»] chr6 (20 HSPs)
chr6 (1-94)||(1319166-1319259)
chr6 (4-89)||(4840740-4840826)
chr6 (4-92)||(13357502-13357593)
chr6 (36-114)||(30245866-30245943)
chr6 (37-114)||(3593371-3593447)
chr6 (4-114)||(24062311-24062421)
chr6 (1-94)||(7054129-7054224)
chr6 (16-114)||(9286360-9286459)
chr6 (4-90)||(9286256-9286344)
chr6 (36-92)||(3593522-3593578)
chr6 (35-83)||(7576137-7576185)
chr6 (4-65)||(33561873-33561936)
chr6 (2-65)||(18247044-18247109)
chr6 (36-92)||(12321000-12321057)
chr6 (36-93)||(12321130-12321187)
chr6 (36-89)||(30246013-30246066)
chr6 (40-112)||(31885984-31886053)
chr6 (36-92)||(5334695-5334751)
chr6 (1-54)||(31851905-31851960)
chr6 (4-51)||(17156887-17156934)
[»] scaffold0809 (2 HSPs)
scaffold0809 (4-114)||(3798-3908)
scaffold0809 (16-89)||(3926-3999)
[»] scaffold0740 (1 HSPs)
scaffold0740 (36-92)||(3698-3754)
[»] scaffold0450 (2 HSPs)
scaffold0450 (36-114)||(8044-8122)
scaffold0450 (1-112)||(7891-8005)
[»] scaffold0632 (1 HSPs)
scaffold0632 (45-114)||(2799-2869)
[»] scaffold0041 (1 HSPs)
scaffold0041 (16-114)||(38080-38178)
[»] scaffold0032 (1 HSPs)
scaffold0032 (36-92)||(91230-91286)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-62)||(488-549)
[»] scaffold0026 (1 HSPs)
scaffold0026 (36-92)||(4611-4668)
[»] scaffold0384 (1 HSPs)
scaffold0384 (36-92)||(4379-4434)
[»] scaffold0010 (1 HSPs)
scaffold0010 (4-61)||(26450-26509)


Alignment Details
Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 35798597 - 35798349
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    ||||||||||||||| ||||| ||| |||||||||     || |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  35798597 aataaaataaaattgatttttgtttggcctattaa-----aaataaaacaaaaatattttacaggtgatgaatcaaaataaaaattttacaaaggtgaaa 35798503  T
Q  101 accagaaatgacct-------------------ctactaacccttaaattaatatcacttagaaaacaatttagatgagttccaaggcggggacattttg 181  Q
    | || |||||||||                   ||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  35798502 atcaaaaatgacctatattatagaaataaagacctattaacccttaaattaatatgacttgtaaaacaatttagatgagttccaaggcgggggcattttg 35798403  T
Q  182 ctgcacattacagtacctgacagatccacgtgcacactgatccacttacataat 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35798402 ctgcacattacagtacctgacagatccacgtgcacgctgatccacttacataat 35798349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 31861641 - 31861751
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||  | ||||||    
T  31861641 aaaataaaattggtttttgtttagcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaagggtgaaaa 31861740  T
Q  102 ccagaaatgac 112  Q
     ||||||||||    
T  31861741 tcagaaatgac 31861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 42119205 - 42119314
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  ||||||    
T  42119205 aaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttacag-ggggaaaac 42119302  T
Q  103 cagaaatgacct 114  Q
    ||||||| ||||    
T  42119303 cagaaattacct 42119314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 38482422 - 38482348
Alignment:
Q  40 aaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||    
T  38482422 aaatcaaaataaaaatattttacaggggatgaatcaaaataaaatttttacagggaggaaaaccagaattgacct 38482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 40339475 - 40339363
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatga 98  Q
    ||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||| || | ||||||||||| ||| |||||||| || ||    
T  40339475 aataaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaatcaaaattttacaggga-ga 40339377  T
Q  99 aaaccagaaatgac 112  Q
    ||| ||||||||||    
T  40339376 aaatcagaaatgac 40339363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24098577 - 24098690
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||||||||| ||| ||||||||  ||||| || ||||||||||||||||||| | | ||||||||||||||| ||||||||    |||    
T  24098577 aataaaataaaattggtttttgtttggcctattagggggtatatcaaaacaaaaatattttacacg-ggtgaatcaaaataaaaattttacaggagggaa 24098675  T
Q  100 aaccagaaatgacct 114  Q
    ||||| |||||||||    
T  24098676 aaccaaaaatgacct 24098690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 33052958 - 33052868
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||  ||| |||||||| ||| ||||| ||||||||||||||||||| || | ||||||||||||||||||||||||    
T  33052958 aaaataaaattggttttagtttggcctattagggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaatttttacag 33052868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39418864 - 39418978
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||| ||  | | |||||||| |||  ||||||||||  |||    
T  39418864 aataaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttatagagggtaaatcaaaaaaaatattttacagaggggaa 39418963  T
Q  100 aaccagaaatgacct 114  Q
    |||| ||||||||||    
T  39418964 aaccggaaatgacct 39418978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12382971 - 12382877
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaag--ggtaaattaaaacaaaaatatttta-caggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||||| ||| |||||||| |  ||||||| ||||||||||||||||| | || | ||||||||||||||| ||||||||    
T  12382971 aataaaataaaattggtttttgtttggcctattagggaggtaaatcaaaacaaaaatattttaccgggagctgaatcaaaataaaaattttacag 12382877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 39153540 - 39153621
Alignment:
Q  5 aaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaat 84  Q
    ||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | | ||||||||||||||    
T  39153540 aaataaaattggtttttgtttggcctattaggggagtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaaat 39153621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 24098561 - 24098485
Alignment:
Q  16 gtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||| ||| |||||||| || ||||| ||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  24098561 gtttttgtttggcctattagggataaatcaaaacaaaattattttacagggggtgaatcaaaataaaaattttacag 24098485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 31861599 - 31861544
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||    
T  31861599 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttaca 31861544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 37204896 - 37205007
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||| |||||||| |||| ||| |||||||  ||| ||||| ||||||||||||||||||||| | | |||||||||||| |||||||||   |||||||    
T  37204896 aaaaaaaaattggattttgtttggcctattggggggtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaattttttacaggagtgaaaac 37204995  T
Q  103 cagaaatgacct 114  Q
    |  |||||||||    
T  37204996 cgaaaatgacct 37205007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 9227033 - 9227111
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | | |||||||| |||  |||||||| |  ||||||||||||||||||    
T  9227033 gggtaaatcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacaggggggaaaaccagaaatgacct 9227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 21149027 - 21149128
Alignment:
Q  16 gtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatc-aaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | | |||| ||||||||| |||||||| || |||||||| |||||||    
T  21149027 gtttttgtttggcctattaggggagtaaatcaaaacaaaaatattttacagggggtaaatcaaaaataaaaattttacagggaagaaaaccaaaaatgac 21149126  T
Q  113 ct 114  Q
    ||    
T  21149127 ct 21149128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 21148929 - 21148830
Alignment:
Q  16 gtttttattttgcctattaaggg---taaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatga 111  Q
    |||||| ||| ||||||||||||   ||||| |||||||||||||||||||| | | ||||||||||||||| |||||||| ||  ||||||||||||||    
T  21148929 gtttttgtttggcctattaagggggataaatcaaaacaaaaatattttacagcgggttgaatcaaaataaaaattttacag-ga--aaaaccagaaatga 21148833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 22642256 - 22642185
Alignment:
Q  6 aataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaa 78  Q
    |||||||||||||||  ||| |||||||| |||||||| ||||||||||||||||||||| ||| ||| ||||    
T  22642256 aataaaattggttttg-tttggcctattaggggtaaatcaaaacaaaaatattttacaggggataaataaaaa 22642185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 35030875 - 35030942
Alignment:
Q  45 aaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||| || |||||| |||||||||    
T  35030875 aaaacaaaaatattttacaggagattgaatcaaaataaaaattttacag-gaggaaaactagaaatgac 35030942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 20688903 - 20688848
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||||| ||||||||||||||||||||| | ||||| ||||||||| |||||||    
T  20688903 gggtaaatcaaaacaaaaatattttacagggggtgaattaaaataaaaattttaca 20688848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 26592433 - 26592354
Alignment:
Q  34 aagggtaaattaaaacaaaaatattttacaggt-gatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||||||| ||||||||||||||||| || | | ||||||||||||||| ||||||||    ||||||||||||||||    
T  26592433 aagggtaaatcaaaacaaaaatattttatagatgggtgaatcaaaataaaaattttacaggagggaaaaccagaaatgac 26592354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 20688946 - 20689033
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa--gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    ||||| |||||||||||| ||| || ||||||  |||||||| ||||||||||||||||||||| | |||||||||||| || |||||||    
T  20688946 aaaattaaattggtttttgtttggc-tattaaaggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaatagaaattttaca 20689033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 22551676 - 22551772
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||| ||| |||||||| ||| ||||| ||||||||| ||||||||||| | | ||||||||||||| |||||||| |   |||||||||||||||    
T  22551676 gtttttgtttagcctattatggggtaaatcaaaacaaaa-tattttacagggggtaaatcaaaataaaaattttacagggggaaaaaccagaaatgac 22551772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 35798610 - 35798710
Alignment:
Q  16 gtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacc 113  Q
    |||||| ||| ||||||| ||||  ||||| |||||||||||||||||| || | ||||||||||||||| ||||| |  || |||||||  ||||||||    
T  35798610 gtttttgtttggcctattgagggagtaaatcaaaacaaaaatattttactggaggtgaatcaaaataaaaattttatatggaggaaaaccgaaaatgacc 35798709  T
Q  114 t 114  Q
    |    
T  35798710 t 35798710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33483037 - 33483120
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaag--ggtaaattaaaacaaaaatattttacag-gtgatgaatcaaaataa 81  Q
    ||||||||||||||||||||| |||  ||||||| |  | ||||| |||||||||||||||||||| | | |||||||||||||    
T  33483037 aataaaataaaattggtttttgtttgtcctattagggagataaatcaaaacaaaaatattttacagagaggtgaatcaaaataa 33483120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 36354722 - 36354779
Alignment:
Q  27 gcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    |||||||||||  |||||| ||||||||||||||||||||| | |||||||||||||||    
T  36354722 gcctattaaggaggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaa 36354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 8388662 - 8388711
Alignment:
Q  46 aaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagaga 95  Q
    |||||||||||||||| ||| | |||||||||||||||  ||||||||||    
T  8388662 aaacaaaaatattttaaaggagttgaatcaaaataaaaaatttacagaga 8388711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 11664179 - 11664128
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    ||||||| ||||||||||||||||||| | ||| ||||||||||||| |||||    
T  11664179 ggtaaatcaaaacaaaaatattttaca-gagataaatcaaaataaaaatttta 11664128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 20698448 - 20698547
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtg-atgaatcaaaataaaatttttacagagatgaaaaccagaaatgacc 113  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||| ||| |  ||||||||||||||| || ||||| |   ||||||||||||||||    
T  20698448 gtttttgtttggcctattaggggctaaatcaaaacaaaaatattttataggggtgtgaatcaaaataaaaattctacag-gggaaaaaccagaaatgacc 20698546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 24329464 - 24329512
Alignment:
Q  35 agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||| |||||||||||||||||||  |  |||||||||||||||    
T  24329464 agggtaaatcaaaacaaaaatattttacaaatagtgaatcaaaataaaa 24329512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26034993 - 26034938
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaa 54  Q
    ||||||||||||||||||||| ||| ||||||||   |||||||| ||||||||||    
T  26034993 aataaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaa 26034938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 28149576 - 28149464
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  28149576 aaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacagggatgaaaa 28149477  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  28149476 ccagaaatgacct 28149464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37147697 - 37147812
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatga 98  Q
    ||||||||||||||||||||| ||| |||||||| ||  |||||| ||||||||||||||||||||  | |||||||||||||| ||||||||| |||||    
T  37147697 aataaaataaaattggtttttgtttggcctattagggaggtaaatcaaaacaaaaatattttacagaaggtgaatcaaaataaattttttacagggatga 37147796  T
Q  99 aaaccagaaatgacct 114  Q
    ||||||||||||||||    
T  37147797 aaaccagaaatgacct 37147812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 29098146 - 29098051
Alignment:
Q  16 gtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  ||||||||||||||||    
T  29098146 gtttttatttggcctattaagggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacag-ggggaaaaccagaaatgac 29098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16577262 - 16577352
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    ||||||||||||||||||||| |||  ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||| |||||||    
T  16577262 aataaaataaaattggtttttgtttgacctattaagggataaatcaaaacaaaaatattttataggggatgaatcaaaataaattttttac 16577352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 28110392 - 28110283
Alignment:
Q  5 aaataaaattggtttttattttgcctattaagggta-aattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaacc 103  Q
    ||||||||||||||||| ||| |||||||||||  | ||| ||||||||||||||||||||| | |||||||||||||||   |||||| | ||||||||    
T  28110392 aaataaaattggtttttgtttggcctattaaggagataataaaaacaaaaatattttacagggg-tgaatcaaaataaaaaaattacaggggtgaaaacc 28110294  T
Q  104 agaaatgacct 114  Q
    |||||||||||    
T  28110293 agaaatgacct 28110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 1499027 - 1498938
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  1499027 aaaaaaaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacatggggtgaatcaaaataaaaattttacag 1498938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 28484507 - 28484619
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||||||||| |||   ||||||  |  |||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  |||||    
T  28484507 aaaataaaattggtttttgtttgatctattagagatgtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagggcggaaaa 28484606  T
Q  102 ccagaaatgacct 114  Q
    ||| |||||||||    
T  28484607 ccaaaaatgacct 28484619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 38625053 - 38625160
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||||||||||||||| |||  | ||||| ||| ||| ||||||||||||||||||||| | ||||||||||||||||| |||||||| || |||||     
T  38625053 aaaataaaattggtttttgtttgacttattagggggtaagttaaaacaaaaatattttaca-gagatgaatcaaaataaaaattttacaggga-gaaaat 38625150  T
Q  103 cagaaatgac 112  Q
    ||||||||||    
T  38625151 cagaaatgac 38625160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 3364511 - 3364565
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  3364511 ggtaaatcaaaacaaaaatattttacaggagatgaatcaaaataaaaattttaca 3364565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 22535598 - 22535710
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| ||||||||   |||||||| ||||||||||| |||||| | | | ||||||||||||||| |||||||| |  ||||    
T  22535598 aaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatgttttacaaagggttgaatcaaaataaaaattttacag-ggggaaa 22535696  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  22535697 accagaaatgacct 22535710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 30371493 - 30371415
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | ||||| ||||||||| |||||||| |  |||||||| |||||||||    
T  30371493 gggtaaatcaaaacaaaaatattttacagggggtgaataaaaataaaaattttacaggggggaaaaccaaaaatgacct 30371415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 38210968 - 38210894
Alignment:
Q  40 aaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  ||||||||||||| ||||    
T  38210968 aaatcaaaacaaaaatattttacaggaggtgaatcaaaataaaaattttacaggggagaaaaccagaaattacct 38210894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3364471 - 3364388
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaag--ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||||||||||||||| ||| |||||||| |  ||||||| |||||||||||| |||||||| | |||||||||||||||    
T  3364471 aataaaataaaattggtttttgtttggcctattagggtggtaaatcaaaacaaaaatactttacagg-ggtgaatcaaaataaaa 3364388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 9011899 - 9012009
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaat-aaaatttttacagagatgaaa 100  Q
    |||| ||||||||||||| ||| |||||||| |||  ||||  ||||||||||||||||||| | | ||||||||||| |||| ||||||||||  ||||    
T  9011899 aaaaaaaaattggtttttgtttggcctattaggggggtaaaccaaaacaaaaatattttacaaggggtgaatcaaaataaaaaattttacagaggggaaa 9011998  T
Q  101 accagaaatga 111  Q
    |||| ||||||    
T  9011999 accaaaaatga 9012009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 16577223 - 16577168
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||    
T  16577223 gggtaaatcaaaacaaaaatattttacagaggatgaatcaaaataagatttttaca 16577168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 38386040 - 38385965
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||| |||||||||| ||| |||||| | ||||||||||||||| |||||||||||  |||||| ||||||||||    
T  38386040 ggtaaatcaaaacaaaaacattctacaggaggtgaatcaaaataaaaattttacagaga--aaaaccggaaatgacct 38385965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 28484467 - 28484414
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||| ||||||    
T  28484467 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaatttttta 28484414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 39227942 - 39228023
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta-agg-gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    |||||||||||||||||| ||| |||||||| ||| |||||| ||||||||||||||||||||  | ||||||| |||||||    
T  39227942 aaaataaaattggtttttgtttggcctattagaggagtaaatcaaaacaaaaatattttacagagggtgaatcataataaaa 39228023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23260463 - 23260375
Alignment:
Q  1 aataaaataaaattggtttttattttgcctat-taagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttt 88  Q
    |||||||||||||| |||||| ||| || |||    |||||||| ||||||||||||||||||||| | ||||||||||||||| ||||    
T  23260463 aataaaataaaattagtttttgtttggcatataggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 23260375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 28149594 - 28149693
Alignment:
Q  16 gtttttattttgcctattaa-gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacc 113  Q
    |||||| ||| ||||||||  |||||||| |||||||||||||||||| ||| | ||||||||||||||| |||||||| |  ||||||| |||||||||    
T  28149594 gtttttgtttggcctattagtgggtaaatcaaaacaaaaatattttacaaggcggtgaatcaaaataaaaattttacag-ggggaaaaccggaaatgacc 28149692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 1499065 - 1499140
Alignment:
Q  39 taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||| ||||||||||||||||| ||| | ||||||||||||||| |||||||| |  |||||||  |||||||||    
T  1499065 taaatcaaaacaaaaatattttaaagggggtgaatcaaaataaaaattttacaggggggaaaaccgaaaatgacct 1499140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 17328244 - 17328350
Alignment:
Q  8 taaaattggtttttattttgcctatta-ag-ggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaacca 104  Q
    ||||| |||||||| ||| |||||||| || ||||||| ||||||||||||||||||| || | ||||||||||||||| ||||| || |  ||||||||    
T  17328244 taaaactggtttttgtttggcctattagagaggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttatag-ggggaaaacca 17328342  T
Q  105 gaaatgac 112  Q
    ||||||||    
T  17328343 gaaatgac 17328350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 18665818 - 18665729
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttaca 91  Q
    |||||||||||||||||| ||| ||||||||   ||||||| | ||||| |||||||||||| || ||||||||||||||||| |||||||    
T  18665818 aaaataaaattggtttttgtttggcctattaggggggtaaa-tcaaacataaatattttacagggggatgaatcaaaataaaaattttaca 18665729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 37243525 - 37243470
Alignment:
Q  39 taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagag 94  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||  |||||||||    
T  37243525 taaatcaaaacaaaaatattttacagtggatgaatcaaaataaaaaatttacagag 37243470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 38386077 - 38386166
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||| ||||||||| ||| |||||||| ||  |||||| ||||||||||||||||||||| | ||||||||||||||| || |||||    
T  38386077 aaaaaaaatttggtttttgtttggcctattagggaggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattatacag 38386166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 25227967 - 25227854
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| ||||||||   |||||||| ||||||||||||||||| | || | | ||| |||| |||  |||||||| |  ||||    
T  25227967 aaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttagaggggggtaaataaaaaaaaatattttacaggggggaaa 25227868  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  25227867 accagaaatgacct 25227854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 29098168 - 29098277
Alignment:
Q  8 taaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaacca 104  Q
    |||||||| ||||| ||| |||||||| ||  |||||| ||||||||||||||||||| || | ||||||||||||||| ||||| |  |  ||||||||    
T  29098168 taaaattgatttttgtttggcctattagggaggtaaatgaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttataagggagaaaacca 29098267  T
Q  105 gaaatgacct 114  Q
     |||||||||    
T  29098268 aaaatgacct 29098277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 85548 - 85491
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||  |||||||    
T  85548 gggtaaatcaaaacaaaaatattttacagggggatgaatcaaaataaaaaatttacag 85491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 17328199 - 17328122
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||| |||||||||| ||||||||||   | ||||||||||||| |||||||| |  ||||||| ||||||||||    
T  17328199 ggtaaatcaaaacaaaaacattttacagggtgtaaatcaaaataaaaattttacaggggggaaaaccggaaatgacct 17328122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2809759 - 2809703
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaa-gggtaaattaaaacaaaaata 56  Q
    |||||||||||||| |||||| ||||||||||||| |||||||| |||| |||||||    
T  2809759 aataaaataaaattagtttttgttttgcctattaaggggtaaatcaaaaaaaaaata 2809703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 9011864 - 9011808
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||||||||||||||||| |  | ||||||||||||||| ||||||||    
T  9011864 gggtaaatcaaaacaaaaatattttacggagggtgaatcaaaataaaaattttacag 9011808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 19493387 - 19493335
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa-gggtaaattaaaacaaaaat 55  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||| ||||||    
T  19493387 aaaataaaattggtttttgttttgcctattaaggggtaaatcaaaataaaaat 19493335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 19052092 - 19052198
Alignment:
Q  9 aaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccag 105  Q
    ||||||||||||| ||| | |||||| ||  |||||| ||||||||||||||||| | || | |||||||| |||||||||||| ||    |||||||||    
T  19052092 aaaattggtttttgtttggtctattagggatgtaaatcaaaacaaaaatattttataggggggtgaatcaagataaaatttttagaggagggaaaaccag 19052191  T
Q  106 aaatgac 112  Q
    |||||||    
T  19052192 aaatgac 19052198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 85584 - 85666
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacagg-tgatgaatcaaaataa 81  Q
    ||||| ||||||||||||||  ||| |||||||| ||| ||||| ||| |||||||||||||||||  | |||||||||||||    
T  85584 aataatataaaattggttttcgtttggcctattagggggtaaatcaaatcaaaaatattttacaggagggtgaatcaaaataa 85666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 22535581 - 22535506
Alignment:
Q  16 gtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||| ||| |||||||| ||||||||| ||||||||||||||||| ||| | | ||||| ||||||| |||||||    
T  22535581 gtttttgtttggcctattagagggtaaatcaaaacaaaaatattttatagg-ggtaaatcagaataaaaattttaca 22535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 56467560 - 56467674
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||| ||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||    
T  56467560 aataaaataaaattgttttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaattttttacagggatgaa 56467659  T
Q  100 aaccagaaatgacct 114  Q
    |||||||||||||||    
T  56467660 aaccagaaatgacct 56467674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21798477 - 21798363
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||| || ||||| |   ||    
T  21798477 aataaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacaggggatgaatcaaaataaaaattctacagggggtaa 21798378  T
Q  100 aaccagaaatgacct 114  Q
    |||||||||||||||    
T  21798377 aaccagaaatgacct 21798363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 43751195 - 43751302
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca-gagatgaaaa 101  Q
    |||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||  ||||    
T  43751195 aaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacaggagatgaattaaaataaaaattttacaggagagaaaaa 43751294  T
Q  102 ccagaaat 109  Q
    ||||||||    
T  43751295 ccagaaat 43751302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 9791557 - 9791669
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatga 98  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||| ||||||||||||||||||| || | ||||||||||||||| |||||||| || ||    
T  9791557 aataaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacaggga-ga 9791655  T
Q  99 aaaccagaaatgac 112  Q
    |||||| |||||||    
T  9791656 aaaccaaaaatgac 9791669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18454341 - 18454456
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatga 98  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||  ||||||||||||||||||| || | ||||||||||||||| ||||||||   |||    
T  18454341 aataaaataaaattggtttttgtttggcctattagggggtaaagcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacaggagtga 18454440  T
Q  99 aaaccagaaatgacct 114  Q
    ||||| ||||||||||    
T  18454441 aaaccggaaatgacct 18454456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 16493670 - 16493748
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||| |||||| ||||    
T  16493670 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagaggtgaaaactagaaataacct 16493748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 17289891 - 17290003
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | ||||||||||||||| ||||| || |  |||||    
T  17289891 aaaataaaattggtttttgtttggcctattaggggcgtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttaaaggggggaaaa 17289990  T
Q  102 ccagaaatgacct 114  Q
    | | |||||||||    
T  17289991 caaaaaatgacct 17290003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21780267 - 21780173
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg---taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||||| ||| |||||||| |||   ||||||||||| ||||||||||||| | | ||||||||||||||| ||||||||    
T  21780267 aataaaataaaattggtttttgtttagcctattagggggggtaaattaaaaccaaaatattttacatggggtgaatcaaaataaaaattttacag 21780173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 16493626 - 16493548
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| |||||||||||||||||||||   |||||||||||||| ||||||||| | |||||||| ||||||||||    
T  16493626 gggtaaatcaaaacaaaaatattttacagggagtgaatcaaaataaattttttacaggggtgaaaaccggaaatgacct 16493548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 17289851 - 17289773
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  |||||||| |||||||||    
T  17289851 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggggaaaaccaaaaatgacct 17289773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1386148 - 1386083
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacagg 65  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||||||||    
T  1386148 aataaaataaaattggtttttgtttggcctattaagggataaatcaaaacaaaaatattttacagg 1386083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 44561578 - 44561505
Alignment:
Q  18 ttttattttgcctattaa-gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  44561578 ttttatttggccaattaaagggtaaattaaaacaaaaatattttacagggggtgaatcaaaataaaaattttac 44561505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 56216857 - 56216965
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||| ||||| ||| |||||||| ||| ||||| ||||||||||||||||||    | ||||||||||||||| ||||||||| | |||    
T  56216857 aataaaataaaattgctttttgtttggcctattagggggtaaatcaaaacaaaaatattttacgaaaggtgaatcaaaataaaaattttacaga-aggaa 56216955  T
Q  100 aaccagaaat 109  Q
    ||||||||||    
T  56216956 aaccagaaat 56216965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 1386187 - 1386243
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  1386187 gggtaaattaaaacaaaaatattttacaggggataaatcaaaataaaaattttacag 1386243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 9001552 - 9001495
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacaga 93  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  9001552 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaga 9001495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 17313009 - 17313065
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||    
T  17313009 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaattttttacag 17313065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 39868576 - 39868520
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  39868576 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacag 39868520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 47321114 - 47321039
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||    
T  47321114 gtttttgtttggcctattaaggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttaca 47321039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 18454302 - 18454223
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||| || | || |||||||||||| |||||||| | |||||||| ||||||||||    
T  18454302 gggtaaatcaaaacaaaaatattttacaagggggtgtatcaaaataaaaattttacaggggtgaaaaccggaaatgacct 18454223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 21780283 - 21780382
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| |||||||| ||| ||||| ||||| ||||||||||||||| | ||||||||||||||| ||||| || |   |||||||||||||||||    
T  21780283 gtttttgtttggcctattagggggtaaatcaaaaccaaaatattttacagggggtgaatcaaaataaaaattttatagggggaaaaaccagaaatgacct 21780382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 39868613 - 39868700
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagggtaaatt-aaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    |||| ||| ||||||||| |||  ||||||| ||| ||| | ||||||||||||||||||||| | ||||||||||||||||||||||    
T  39868613 aaaaaaaatttggtttttgtttgacctattagggggaaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac 39868700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 53231882 - 53231803
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||||   ||||||| |||||||||    
T  53231882 gggtaaatgaaaacaaaaatattttacaaggggataaatcaaaataaaaattttacagaggaaaaaaccaaaaatgacct 53231803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 56467543 - 56467445
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||| ||||||||| |   |||||||||||| ||||    
T  56467543 gtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaattttttacaggggataaaaccagaaatcacct 56467445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 22273059 - 22272982
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||||  |||||||    
T  22273059 gtttttgtttggcctattatggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaaatttacag 22272982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 51396286 - 51396191
Alignment:
Q  16 gtttttattttgcctattaagggtaaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||| ||| |||||||| |||||||| ||||||||||||||||||||   |  |||||||||||||| ||||||||||  ||||||||||||||||    
T  51396286 gtttttgtttggcctatta-gggtaaatcaaaacaaaaatattttacagtagggcgaatcaaaataaaaattttacagag-ggaaaaccagaaatgac 51396191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 45900734 - 45900790
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||||||||||||||||||   | ||||||||||||||||||||||||    
T  45900734 gggtaaatcaaaacaaaaatattttacaaagggtgaatcaaaataaaatttttacag 45900790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11563439 - 11563501
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatatttta 61  Q
    ||||||||||||||||||||| ||| ||||| ||  ||||||||| |||||||||||||||||    
T  11563439 aataaaataaaattggtttttgtttggcctaataggagggtaaatcaaaacaaaaatatttta 11563501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 21798524 - 21798571
Alignment:
Q  45 aaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||||| | |||||||||||||| |||||||||    
T  21798524 aaaacaaaaatattttacagggggtgaatcaaaataaattttttacag 21798571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 44519642 - 44519721
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||| | || | ||||||||||||||| |||||||| |  ||||| ||||||||||||    
T  44519642 gggtaaatcaaaacaaaaatattttataaggggttgaatcaaaataaaaattttacaggggagaaaatcagaaatgacct 44519721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 16482163 - 16482107
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttaca 91  Q
    |||||||| ||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  16482163 gggtaaatcaaaacaaaaatatcttacagagggatgaatcaaaataaaaattttaca 16482107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 40696161 - 40696213
Alignment:
Q  40 aaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||||||||||||||||||||| | |||||||||||||||  |||||||    
T  40696161 aaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaaatttacag 40696213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 13334932 - 13334853
Alignment:
Q  36 gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| |||||||||||||||||| ||| | | |||||||| |||  |||||||| |  ||||||||||||||||||    
T  13334932 gggtaaatcaaaacaaaaatattttacaagggggtaaatcaaaaaaaatattttacaggggggaaaaccagaaatgacct 13334853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 18320599 - 18320541
Alignment:
Q  9 aaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttacagg 65  Q
    ||||||||||||| ||| ||||||||  || |||||| |||||||||||||||||||||    
T  18320599 aaaattggtttttgtttggcctattaggagagtaaatcaaaacaaaaatattttacagg 18320541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 44519587 - 44519484
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatatttta-caggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacc 113  Q
    |||||| ||| |||||||| ||| ||||| |||||||||||||||||  ||| | ||||||||||||||| |||||||  |   |||||| |||||||||    
T  44519587 gtttttgtttggcctattatggggtaaatcaaaacaaaaatattttataaggggttgaatcaaaataaaaattttacaaggggaaaaaccggaaatgacc 44519488  T
Q  114 tcta 117  Q
    ||||    
T  44519487 tcta 44519484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 43318570 - 43318647
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| |||| ||||||||| |||||| | | |||||||||||||  ||||||| |  ||||||||||||||||||    
T  43318570 gggtaaatcaaaaaaaaaatattctacagggggtaaatcaaaataaaaaatttacag-gtggaaaaccagaaatgacct 43318647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 45900693 - 45900612
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||||| |||||| ||| ||||  ||||||  ||||| ||||||||||||||||||||| | | |||||||| ||||    
T  45900693 aaaataaaattagtttttgtttggccttataagggggtaaatcaaaacaaaaatattttacagggggtaaatcaaaacaaaa 45900612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 55363822 - 55363740
Alignment:
Q  11 aattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||| ||| |||||||| ||| ||||| |||||||   | ||||||||| | ||||||||||||||| ||||||||    
T  55363822 aattggtttttgtttggcctattagggggtaaatcaaaacaatttttttttacagggggtgaatcaaaataaaaattttacag 55363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 18437220 - 18437176
Alignment:
Q  38 gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||    
T  18437220 gtaaatcaaaacaaaaatattttacatg-gatgaatcaaaataaaa 18437176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 43751175 - 43751126
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacag 64  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||    
T  43751175 gtttttgtttggcctattaaggggtaaatcaaaacaaaaatattttacag 43751126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11563400 - 11563345
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||| || || | ||||||||||||||| ||||||||    
T  11563400 gggtaaatcaaaacaaaaatatttcacggggg-tgaatcaaaataaaaattttacag 11563345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 38193110 - 38193221
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  ||||||    
T  38193110 aaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacaggggttgaatcaaaataaaaattttacaggggagaaaac 38193209  T
Q  103 cagaaatgacct 114  Q
    ||||||||||||    
T  38193210 cagaaatgacct 38193221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1693365 - 1693472
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    |||||||| |||||||||||| ||| || ||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||  |||    
T  1693365 aataaaatcaaattggtttttgtttggcatattagggggtaaatcaaaacaaaaatattttacaggggatgaatcaaaataaaaattttacagag-ggaa 1693463  T
Q  100 aaccagaaa 108  Q
    |||||||||    
T  1693464 aaccagaaa 1693472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 35913198 - 35913308
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||| ||||||||||||| ||| ||||||||||||  ||||| ||||||||||||||||| ||| || |||||||||||||||||||||||| | || ||    
T  35913198 aaaaaaaaattggtttttgtttggcctattaagggggtaaatcaaaacaaaaatattttataggggagtgaatcaaaataaaatttttacaggggtgtaa 35913297  T
Q  101 accagaaatga 111  Q
    |||||||||||    
T  35913298 accagaaatga 35913308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 26930775 - 26930687
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||| | |||||||| |||||| |||||||    
T  26930775 aaaataaaattggtttttatttggcctattagggggtaaatcaaaacaaaaatattttacaggggttgaatcaacataaaaattttaca 26930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19410656 - 19410540
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatg 97  Q
    ||||||||||||| ||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| || ||||||||||||||| |||||||| |       
T  19410656 aataaaataaaataggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacaggggagtgaatcaaaataaaaattttacaggggaa 19410557  T
Q  98 aaaaccagaaatgacct 114  Q
    |||||||||||| ||||    
T  19410556 aaaaccagaaataacct 19410540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 44413999 - 44414083
Alignment:
Q  6 aataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||| ||| | ||||||||||||||| |||||||    
T  44413999 aataaaattggtttttgtttggcctattaggggtaaatcaaaacaaaaatattttagagg-ggtgaatcaaaataaaaattttaca 44414083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 13279327 - 13279214
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttac-agagatgaa 99  Q
    |||||| ||||||||||| ||| ||||||||||||  ||||| ||||||||||||||||||| || | ||||||||||||||| |||||| ||||  |||    
T  13279327 aaaatagaattggtttttgtttggcctattaagggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacaagag-ggaa 13279229  T
Q  100 aaccagaaatgacct 114  Q
    |||||||||||||||    
T  13279228 aaccagaaatgacct 13279214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 13286779 - 13286892
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||| || | | |||| |||||||| |||||||| |  ||||    
T  13286779 aaaataaaattggtttttgtttagcctattaggggggtaaatcaaaacaaaaatattttacagggggttaaatcgaaataaaaattttacaggggggaaa 13286878  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  13286879 accagaaatgacct 13286892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 5021730 - 5021807
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||| |||||||||||||||||||||   ||||||||||||||| ||||||||||  |||||||| |||||||||    
T  5021730 ggtaaatcaaaacaaaaatattttacaggaagtgaatcaaaataaaaattttacagaggagaaaaccataaatgacct 5021807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16902250 - 16902343
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacagg-tgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||| ||| |||||||||||||||||  | ||||||||||||||| ||||||||    
T  16902250 aataaaataaaattggtttttgtttggcctattagggggtaaatcaaagcaaaaatattttacaggaggttgaatcaaaataaaaattttacag 16902343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 23784724 - 23784614
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||| ||||| ||| | |||||| |||  ||||||||||||||||||||||||| | | |||||||||||||||||||||||| |  |||||    
T  23784724 aaaataaaattgatttttgtttggtctattaggggggtaaattaaaacaaaaatattttacatg-ggtgaatcaaaataaaatttttacag-ggggaaaa 23784627  T
Q  102 ccagaaatgacct 114  Q
    |||| ||||||||    
T  23784626 ccagtaatgacct 23784614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31186816 - 31186932
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacagagatg 97  Q
    ||||||||||||||||||||| ||| | |||||| |||  ||||| |||||||||||||||||||| | | |||  |||||||||| |||||||||| ||    
T  31186816 aataaaataaaattggtttttgtttggtctattaggggggtaaatcaaaacaaaaatattttacagaggggtgagccaaaataaaaattttacagaggtg 31186915  T
Q  98 aaaaccagaaatgacct 114  Q
    ||||| | |||||||||    
T  31186916 aaaacaaaaaatgacct 31186932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 43251639 - 43251563
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  43251639 gtttttgtttggcctattaaggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaatttttacag 43251563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4518012 - 4518106
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||||| ||| ||||||||   |||||||| |||||||||||||||| | ||| | ||||||||||||||| ||||||||    
T  4518012 aataaaataaaattggtttttgtttggcctattaggtgggtaaatcaaaacaaaaatattttccaaggggttgaatcaaaataaaaattttacag 4518106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 19272326 - 19272250
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||| ||||||||  |  |||||||||||||||||    
T  19272326 gggtaaattaaaacaaaaaaattttacaggggctgaatcaaaataaaaattttacaggaa--aaaaccagaaatgacct 19272250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 19979786 - 19979704
Alignment:
Q  9 aaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||||| |||||| ||| |||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||    
T  19979786 aaaattcgtttttgtttggcctattaaggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttaca 19979704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 34857720 - 34857661
Alignment:
Q  6 aataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacagg 65  Q
    |||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||    
T  34857720 aataaaattggtttttgtttggcctattaggggtaaatcaaaacaaaaatattttacagg 34857661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 23314865 - 23314775
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||| ||||| ||| |||||||| ||| ||||| |||||||||||||||||||| | | ||||||||||||||| ||||||||    
T  23314865 aaaataaaattgatttttgtttggcctattacggggtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaattttacag 23314775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23371591 - 23371479
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||| ||||||| ||| |||||||| ||||| ||| |||| ||| |||||||| ||| | |||||||||||||||||||||||| |  |||    
T  23371591 aataaaataaaataggtttttgtttggcctattagagggtgaatcaaaa-aaatatattttataggaggtgaatcaaaataaaatttttacag-ggggaa 23371494  T
Q  100 aaccagaaatgacct 114  Q
    ||||| |||||||||    
T  23371493 aaccataaatgacct 23371479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 19979793 - 19979884
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatat-tttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||||||||||||| ||| |||||||||||  |||||| |||||||||| || |||||||| |  |||||||||||||||||||||||    
T  19979793 aaaaaaaaattggtttttgtttggcctattaagggcgtaaatcaaaacaaaaacatatttacagggggcgaatcaaaataaaatttttacag 19979884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 23371608 - 23371683
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  23371608 gtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacaggggataaatcaaaataaaaattttac 23371683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 24204930 - 24204843
Alignment:
Q  28 cctattaagggtaaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||| |||||||| |||||||||||||||||||| | | ||||||||||||||| |||||||| |  |||||||  |||||||||    
T  24204930 cctattaggggtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaattttacagggtggaaaaccgaaaatgacct 24204843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 16902212 - 16902134
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||  | | ||||||||| ||| |||||||| || ||||||| ||||||||||    
T  16902212 gggtaaatcaaaacaaaaatattttacagagggtaaatcaaaatcaaaattttacagggaggaaaaccggaaatgacct 16902134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 19410701 - 19410757
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| | | ||||||||||||| ||||||||    
T  19410701 gggtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaaagttttacag 19410757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 21298122 - 21298066
Alignment:
Q  36 gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttaca 91  Q
    ||||||||||||||||||||||||||| | | | |||||||||||||||||||||||    
T  21298122 gggtaaattaaaacaaaaatattttacaaaggggtgaatcaaaataaaatttttaca 21298066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 23784761 - 23784808
Alignment:
Q  35 agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  23784761 agggtaaatcaaaacaaaaatattttacagg-gatgaatcaaaataaaa 23784808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 26050320 - 26050411
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||| ||| ||||||||   |||||| | ||||||||| ||||||||| || | ||||||||||||||| ||||||||    
T  26050320 aaaataaaattggtttttgtttggcctattaggggggtaattcaaaacaaaagtattttacagggggttgaatcaaaataaaaattttacag 26050411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 26059679 - 26059770
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||| ||| ||||||||   |||||| | ||||||||| ||||||||| || | ||||||||||||||| ||||||||    
T  26059679 aaaataaaattggtttttgtttggcctattaggggggtaattcaaaacaaaagtattttacagggggttgaatcaaaataaaaattttacag 26059770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 39580119 - 39580193
Alignment:
Q  38 gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||  ||||||| || ||||||| ||||||||||    
T  39580119 gtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaaatttacag-gaggaaaaccggaaatgacct 39580193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 12814733 - 12814671
Alignment:
Q  5 aaataaaattggtttttattttgcctattaa--gggtaaattaaaacaaaaatattttacagg 65  Q
    ||||||||||||||||| ||| |||||||||  |||||||| |||||||||| ||||||||||    
T  12814733 aaataaaattggtttttgtttggcctattaagggggtaaatcaaaacaaaaacattttacagg 12814671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 13279367 - 13279422
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||| ||||||||||||||||||||| | ||||| ||||||||| ||||||||    
T  13279367 ggtaaatcaaaacaaaaatattttacagggggtgaattaaaataaaaattttacag 13279422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 21298159 - 21298241
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa--gggtaaattaaaacaaaaat-attttacaggtgatgaatcaaaataaaa 83  Q
    |||| ||||||||||||| ||| |||||||||  |||||||| ||||||||||| |||||||| | || ||||||||||||||    
T  21298159 aaaaaaaaattggtttttgtttagcctattaagggggtaaatcaaaacaaaaataattttacaagggaggaatcaaaataaaa 21298241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 24205266 - 24205348
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaa 83  Q
    |||| ||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||| || | |||||||||||||||    
T  24205266 aaaaaaaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaa 24205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 24206784 - 24206866
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaa 83  Q
    |||| ||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||| || | |||||||||||||||    
T  24206784 aaaaaaaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaa 24206866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 31186777 - 31186718
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagag 94  Q
    |||||||| ||||||||||||||||||| || | ||||||||||||||| ||||||||||    
T  31186777 gggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacagag 31186718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 38193069 - 38193018
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttt 87  Q
    |||||||| ||||||||||||||||||||| | | |||||||||||||||||    
T  38193069 gggtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaaatttt 38193018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 45164091 - 45164146
Alignment:
Q  59 ttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||| | ||||||||||||||| |||||||| | |||||||||||||||||||    
T  45164091 ttacaggaggtgaatcaaaataaaaattttacaggggtgaaaaccagaaatgacct 45164146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43251655 - 43251740
Alignment:
Q  1 aataaaataaaattggtttttattttgcc--tatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||||||||||||||| ||| | |  |||||  |||||||| ||||||||||||||| ||||| | |||||||||||||||    
T  43251655 aataaaataaaattggtttttgtttggtctatattagggggtaaatcaaaacaaaaatatttaacagggggtgaatcaaaataaaa 43251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 39119039 - 39119116
Alignment:
Q  17 tttttattttgcctattaagg-gtaaattaaaacaaaa-atattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||| ||| |||||||| || |||||| ||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  39119039 tttttgtttggcctattagggtgtaaatcaaaacaaaaaatattttacaggaggtgaatcaaaataaaaattttacag 39119116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 24555846 - 24555786
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttaca 63  Q
    |||| ||||||||||||| ||| |||||||| ||| ||||| |||||||||||||||||||    
T  24555846 aaaaaaaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttaca 24555786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 39119019 - 39118932
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    |||||||| ||||||||| ||| |||||||| | |  ||||| ||||||||||||||||||||   ||| |||||||||||| |||||    
T  39119019 aaaataaagttggtttttgtttggcctattaggcggataaatcaaaacaaaaatattttacagagaatggatcaaaataaaaatttta 39118932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 19272365 - 19272453
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    |||| ||||||||||||| ||| ||||||||   |||||||| |||| |||||||||||| | | | ||||||||||||||| |||||||    
T  19272365 aaaaaaaaattggtttttgtttggcctattaggggggtaaatcaaaataaaaatattttata-gaggtgaatcaaaataaaaattttaca 19272453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 26050302 - 26050252
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacagg 65  Q
    |||||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  26050302 gtttttgttttgcctattagggggtaaatcaaaacaaaaatattttacagg 26050252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 26059661 - 26059611
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacagg 65  Q
    |||||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  26059661 gtttttgttttgcctattagggggtaaatcaaaacaaaaatattttacagg 26059611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 48104643 - 48104585
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatatttta 61  Q
    |||| ||||||||||||| ||| |||||||| ||| ||||| |||||||||||||||||    
T  48104643 aaaaaaaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatatttta 48104585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 1693326 - 1693269
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtg-atgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| |  |||||||||||||||  |||||||    
T  1693326 gggtaaatcaaaacaaaaatattttacaggggtgtgaatcaaaataaaaaatttacag 1693269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 45164021 - 45163964
Alignment:
Q  36 gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||||||||||||||| | ||| | ||||||||||||||| ||||||||    
T  45164021 gggtaaatcaaaacaaaaatattttgcaagggggtgaatcaaaataaaaattttacag 45163964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29141097 - 29141036
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacag 64  Q
    ||||||||||| || |||||| ||| |||||||| |||||||| |||  |||||||||||||||    
T  29141097 aataaaataaatttagtttttgtttggcctattaggggtaaatcaaa--aaaaatattttacag 29141036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 35913149 - 35913101
Alignment:
Q  45 aaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  35913149 aaaacaaaaatattttacaagggggtgaatcaaaataaaaattttacag 35913101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 48104656 - 48104736
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagag 94  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||| | |||| | ||| ||||||||| ||||||||||    
T  48104656 gtttttttttggcctattagggggtaaatcaaaacaaaaatattttatagggtggtaaataaaaataaaaattttacagag 48104736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 1973 - 2086
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||| | |  |||||||||||||||||||||||| | |||||    
T  1973 aaaataaaattggtttttgtttagcctattaggggggtaaatcaaaacaaaaatattttacaagagggtgaatcaaaataaaatttttacaggggtgaaa 2072  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  2073 accagaaatgacct 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 1954 - 1857
Alignment:
Q  16 gtttttattttgcctattaagggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| ||||||||  ||||||| |||||||||||||||||| ||| | |||||||||||||||  ||||||| |  ||||||  ||||||||||    
T  1954 gtttttgtttggcctatta--ggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaaactttacaggggagaaaactggaaatgacct 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26447497 - 26447579
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26447497 aataaaataaaattgatttttgtttggcctattaggggtaaatcaaaacaaaaatattttacaggggatgaatcaaaataaaa 26447579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 34019041 - 34019151
Alignment:
Q  5 aaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaacc 103  Q
    ||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||| | | |||||||||||||||||||||||| ||||||||      
T  34019041 aaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacaaggggtgaatcaaaataaaatttttacagggatgaaaata 34019140  T
Q  104 agaaatgacct 114  Q
    | |||||||||    
T  34019141 aaaaatgacct 34019151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 43121221 - 43121112
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||| ||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||  ||||    
T  43121221 aaaataaaattgatttttgtttggcctattaggggagtaaatcaaaacaaaaatattttacagggg-tgaatcaaaataaaatttttacagagagaaaaa 43121123  T
Q  102 ccagaaatgac 112  Q
    ||| |||||||    
T  43121122 ccaaaaatgac 43121112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4105192 - 4105077
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||| ||||||||||||||||| ||| | ||||||||||||||| ||||||||||  |||    
T  4105192 aataaaataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttatagg-ggtgaatcaaaataaaaattttacagag--gaa 4105096  T
Q  100 aaccag-aaatgacctcta 117  Q
    || ||| ||||||||||||    
T  4105095 aaacagaaaatgacctcta 4105077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 7988972 - 7989037
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  7988972 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacagaggtgaaaa 7989037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 7988933 - 7988835
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa-gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||||||||||||||| |||  |||||||| |||| ||| ||||||||||||||||||||| | | ||||||||||||| ||||||| ||||||||||    
T  7988933 aaaataaaattggtttttgtttgacctattaaagggttaatcaaaacaaaaatattttacagggggtaaatcaaaataaaaattttaca-agatgaaaac 7988835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 12330488 - 12330566
Alignment:
Q  9 aaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttt 87  Q
    ||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||||| ||| |||||||| || |||||    
T  12330488 aaaattggtttttgtttggcctattaggggtaaatcaaaacaaaaatattttacaggggataaatcaaaaaaatatttt 12330566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 27198324 - 27198400
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||||| ||||||||||||||||||||| | ||||| ||||||||| ||| ||||||  ||||||||||||||||    
T  27198324 gggtaaatcaaaacaaaaatattttacagggggtgaataaaaataaaaatttcacagaggggaaaaccagaaatgac 27198400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27987442 - 27987550
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||||||||| ||| | ||||||  |||||||| |||||||||||||||| |||| | |||||||||||||||  ||||||| ||  ||    
T  27987442 aataaaataaaattggtttttgtttggtctattagggggtaaatcaaaacaaaaatattttgcagg-ggtgaatcaaaataaaaaatttacaggga--aa 27987538  T
Q  100 aaccagaaatga 111  Q
    ||||||||||||    
T  27987539 aaccagaaatga 27987550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28044744 - 28044852
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||||||||||| ||| | ||||||  |||||||| |||||||||||||||| |||| | |||||||||||||||  ||||||| ||  ||    
T  28044744 aataaaataaaattggtttttgtttggtctattagggggtaaatcaaaacaaaaatattttgcagg-ggtgaatcaaaataaaaaatttacaggga--aa 28044840  T
Q  100 aaccagaaatga 111  Q
    ||||||||||||    
T  28044841 aaccagaaatga 28044852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 40770674 - 40770781
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaacc 103  Q
    |||||||||||||||||| ||| |||||| | |||||||| ||||||||| ||||||||| | | ||||| ||||||||| ||||||||  | |||||||    
T  40770674 aaaataaaattggtttttgtttggcctatcaggggtaaatcaaaacaaaattattttacacg-ggtgaataaaaataaaaattttacaggaaggaaaacc 40770772  T
Q  104 agaaatgac 112  Q
    | |||||||    
T  40770773 aaaaatgac 40770781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 4105208 - 4105307
Alignment:
Q  16 gtttttattttgcctattaag-ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| |||||||| | ||||||| ||||||||||||||||| ||| | ||||||||||||||| ||||||||||  |||||| | |||||||||    
T  4105208 gtttttgtttggcctattaggaggtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaaattttacagaggagaaaacaaaaaatgacct 4105307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25601859 - 25601765
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||||| ||| ||||||||   |||||||| |||||||||||||||||| | | | ||||||||||||||| ||||||||    
T  25601859 aataaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacaaagggttgaatcaaaataaaaattttacag 25601765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 14329549 - 14329627
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||| | | | |||||||||||||||||||||| || |||||||  |||||||||    
T  14329549 gggtaaatcaaaacaaaaatattttacaagggttaaatcaaaataaaatttttacagggaggaaaaccgaaaatgacct 14329627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 34985268 - 34985329
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacagg 65  Q
    |||||||||||||||||| ||| |||||||| |||| ||| |||||||||||||||||||||    
T  34985268 aaaataaaattggtttttgtttggcctattaggggtgaatcaaaacaaaaatattttacagg 34985329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 960412 - 960322
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||||||| ||||| ||| |||||||| ||| ||||| ||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  960412 aaaaaaaaattgatttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacag 960322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 29726246 - 29726136
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||| ||||| ||| |||||||| |||  ||||| ||| |||||||||||||||   | ||||||||||||||| |||||||  |  |||||    
T  29726246 aaaataaaattgctttttgtttggcctattaggggggtaaatcaaaccaaaaatattttacatagggtgaatcaaaataaaagttttacatgg--gaaaa 29726149  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  29726148 ccagaaatgacct 29726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 38500426 - 38500314
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||| ||||||||||||| ||| ||||||||||||  || || ||||||||||||||||||||| | | |||||||| |||  |||||||| || ||| |    
T  38500426 aaaaaaaaattggtttttgtttggcctattaaggggatagatcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacagggaggaaga 38500327  T
Q  102 ccagaaatgacct 114  Q
    ||  |||||||||    
T  38500326 ccgaaaatgacct 38500314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 8315934 - 8315988
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  8315934 ggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttacag 8315988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 14329475 - 14329409
Alignment:
Q  45 aaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    ||||||||||||||| | ||| | ||||||||||||||| |||||||| || ||||||||||||||||    
T  14329475 aaaacaaaaatatttcataggggttgaatcaaaataaaaattttacaggga-gaaaaccagaaatgac 14329409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43945312 - 43945377
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacag 64  Q
    ||||||||||||||| ||||| ||| |||||||| |||  ||||| ||||||||||||||||||||    
T  43945312 aataaaataaaattgatttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacag 43945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 27198253 - 27198196
Alignment:
Q  36 gggtaaattaaaacaaaaa-tattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  27198253 gggtaaatcaaaacaaaaaatattttacagggggtgaatcaaaataaaaattttacag 27198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 25601897 - 25601953
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| | | ||||||||||||  ||||||||    
T  25601897 gggtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaacattttacag 25601953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 2696742 - 2696666
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataa 81  Q
    |||| ||||||||||||| ||| ||||| || ||| ||||| ||||||||||||||||||||  | |||||||||||||    
T  2696742 aaaaaaaaattggtttttgtttggcctactagggggtaaatcaaaacaaaaatattttacag--ggtgaatcaaaataa 2696666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 25277622 - 25277733
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||||||||||||||| ||| ||||||||  |||||||  ||||||||||||  ||||||| | | |||||||| || | |||||||  |  ||||||    
T  25277622 aaaataaaattggtttttgtttggcctattagggggtaaaacaaaacaaaaataaattacagggggtaaatcaaaaaaataattttacaaggtggaaaac 25277721  T
Q  103 cagaaatgacct 114  Q
    | ||||||||||    
T  25277722 cggaaatgacct 25277733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 34985249 - 34985174
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    |||||||||| |||||||| ||| |||||  ||||||| |||||||||||  | ||||||||||||||| ||||||    
T  34985249 gtttttatttggcctattagggggtaaatccaaacaaacatattttacagagggtgaatcaaaataaaaattttac 34985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12330441 - 12330385
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| | | |||||||| |||  ||||||||    
T  12330441 gggtaaatcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacag 12330385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 3548264 - 3548151
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| |||||||||||||||||| || |  |||||||||||||||||||||||| | |||||    
T  3548264 aaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacgggggggtgaatcaaaataaaatttttacaggggtgaaa 3548165  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  3548164 accagaaatgacct 3548151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 49872857 - 49872745
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaaa 101  Q
    ||||||||||| |||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| |  ||||||||||||||| |||||||| | ||||||    
T  49872857 aaaataaaatttgtttttgtttagcctattagggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaacttttacaggggtgaaaa 49872758  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  49872757 ccagaaatgacct 49872745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 22949396 - 22949509
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg---taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| |||  ||||||| |||   ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  ||||    
T  22949396 aaaataaaattggtttttgtttgtcctattagggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggggaaa 22949495  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  22949496 accagaaatgacct 22949509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 30586306 - 30586193
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| | |||||| |||  ||||| ||||||||||||||||||||| |  |||||||||||||||||||||||| | |||||    
T  30586306 aaaataaaattggtttttgtttggtctattaggggggtaaatcaaaacaaaaatattttacaggagggtgaatcaaaataaaatttttacaggggtgaaa 30586207  T
Q  101 accagaaatgacct 114  Q
    ||| ||||||||||    
T  30586206 accggaaatgacct 30586193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 46902013 - 46901923
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa-gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacaga 93  Q
    |||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||| |||||  |||||||||||||||| |||||||||    
T  46902013 aaaataaaattggtttttgtttggcctattaaagggtaaatcaaaacaaaaatatttaacagggtatgaatcaaaataaaaattttacaga 46901923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 36867778 - 36867667
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||||||||| |||  ||||||| |||  ||||| ||||||||||||||||||||| | |||||||||||||| ||||||||| | ||||||    
T  36867778 aaaataaaattggtttttgtttgacctattaggggggtaaatgaaaacaaaaatattttacagggggtgaatcaaaataaattttttacag-ggtgaaaa 36867680  T
Q  102 ccagaaatgacct 114  Q
    | |||||||||||    
T  36867679 ctagaaatgacct 36867667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 27760431 - 27760319
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaag--ggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||| ||||| ||| ||||||||||  ||||||| ||||||||||||||||||| || | ||||||||||||||| ||||||| ||  ||||    
T  27760431 aaaataaaattgttttttgtttggcctattaagagggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttaca-aggggaaa 27760333  T
Q  101 accagaaatgacct 114  Q
    ||||||||||||||    
T  27760332 accagaaatgacct 27760319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 30586324 - 30586425
Alignment:
Q  16 gtttttattttgcctatta--agggtaaattaaaacaaaaatattttacaggt-gatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||||| ||| ||||||||  ||||||||| |||||||||||||||||||||  | ||||||||||||||| |||||||| | |||||||||||||||||    
T  30586324 gtttttgtttggcctattaggagggtaaatcaaaacaaaaatattttacagggaggtgaatcaaaataaaaattttacaggggtgaaaaccagaaatgac 30586423  T
Q  113 ct 114  Q
    ||    
T  30586424 ct 30586425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 12767083 - 12767172
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  12767083 aaaaaaaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacag 12767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 25109970 - 25109891
Alignment:
Q  5 aaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaa 83  Q
    ||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||| | | |||||||||||||||    
T  25109970 aaataaaattggtttttgtttggcctattaggggtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaa 25109891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 19623959 - 19624037
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||  | ||||||||||||||| ||||||||||| |||||||  |||||||||    
T  19623959 gggtaaatcaaaacaaaaatattttacagagggtgaatcaaaataaaaattttacagagaggaaaaccgaaaatgacct 19624037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 30271695 - 30271802
Alignment:
Q  6 aataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaacc 103  Q
    |||||||||||||||| ||| |||| ||| |||  ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| | |||||||     
T  30271695 aataaaattggtttttgtttggcctcttaggggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttacaggggtgaaaaca 30271793  T
Q  104 agaaatgac 112  Q
    | |||||||    
T  30271794 aaaaatgac 30271802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 51252195 - 51252311
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaag--ggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatg 97  Q
    ||||||||||||||||||||| ||| |||||||| |  ||||||| ||||||||||||||||||| || | | |||||||| |||  |||||||| |  |    
T  51252195 aataaaataaaattggtttttgtttggcctattagggaggtaaatcaaaacaaaaatattttacaggggggtaaatcaaaaaaaatattttacagggggg 51252294  T
Q  98 aaaaccagaaatgacct 114  Q
    |||||||||||||||||    
T  51252295 aaaaccagaaatgacct 51252311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 5416198 - 5416091
Alignment:
Q  8 taaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacagagatgaaaaccag 105  Q
    |||||||||||||| ||| |||||||| ||| ||||| |||||||||||||||||||| | | |||||||||||||||  ||||||| |||| |||||||    
T  5416198 taaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaaatttacag-gatggaaaccag 5416100  T
Q  106 aaatgacct 114  Q
    |||| ||||    
T  5416099 aaataacct 5416091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 43767804 - 43767925
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaa--gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag-agatg 97  Q
    ||||||||||||||||||||| |||  |||||||   |||||||| ||||||||||||||||| | | | ||||||||||||||| |||||||| ||| |    
T  43767804 aataaaataaaattggtttttgtttgacctattagaggggtaaatcaaaacaaaaatattttatatgagttgaatcaaaataaaaattttacagtaga-g 43767902  T
Q  98 aaaaccagaaatgacctctacta 120  Q
    |||| || ||||||||| |||||    
T  43767903 aaaatcataaatgacctatacta 43767925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 7584388 - 7584285
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    ||||| |||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||  | ||||||||||||||| ||||| || |  ||||||    
T  7584388 aaaattaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacag--ggtgaatcaaaataaaaattttataggg--gaaaac 7584293  T
Q  103 cagaaatg 110  Q
    ||||||||    
T  7584292 cagaaatg 7584285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 30271652 - 30271574
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||| |||| ||| ||  ||||| | |||||||||    
T  30271652 gggtaaatcaaaacaaaaatattttacaggaggtgaatcaaaataaaaattttgcagggagaaaaactaaaaatgacct 30271574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 3548304 - 3548361
Alignment:
Q  36 gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  3548304 gggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaatttttacag 3548361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 5417217 - 5417270
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||    
T  5417217 ggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttac 5417270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 25109989 - 25110088
Alignment:
Q  16 gtttttattttgcctatta--agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacc 113  Q
    |||||| ||| ||||||||  ||||||||| ||||||||||||||||||  | | ||||||||||||||| |||||||| || |||||||  ||||||||    
T  25109989 gtttttgtttggcctattaggagggtaaatcaaaacaaaaatattttactcggg-tgaatcaaaataaaaattttacagggaggaaaaccgaaaatgacc 25110087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 19623924 - 19623877
Alignment:
Q  45 aaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||    
T  19623924 aaaacaaaaatattttacatgggttgaatcaaaataaaatttttacag 19623877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 22949355 - 22949276
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||| || | ||||||||||||||| |||| |||||   |||||| ||||||||||    
T  22949355 gggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttccagagggaaaaaccggaaatgacct 22949276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 10979982 - 10979901
Alignment:
Q  9 aaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    ||||||| ||||| ||| |||||||| ||| ||||| |||||||||||||||||| || | ||||||||||||||| ||||||    
T  10979982 aaaattgatttttgtttggcctattagggggtaaatcaaaacaaaaatattttac-gggggtgaatcaaaataaaaattttac 10979901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 27432768 - 27432825
Alignment:
Q  36 gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  27432768 gggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaaattttacag 27432825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 36867815 - 36867884
Alignment:
Q  46 aaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||||||||||||| || | ||||||||||||||| |||||||| |  ||||||| ||||||||||    
T  36867815 aaacaaaaatattttacaagggggtgaatcaaaataaaaattttacaggggagaaaaccggaaatgacct 36867884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3072559 - 3072508
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta-agggtaaattaaaacaa 51  Q
    ||||||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  3072559 aataaaataaaattggtttttgtttggcttattagagggtaaattaaaacaa 3072508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 7118229 - 7118118
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    ||||| |||||||||||| ||| ||||||||  |||||||| |||||||||| |  ||||||| | | |||||||| || | |||||||| |  ||||||    
T  7118229 aaaattaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaaaaaattacagggggtaaatcaaaaaaataattttacaggggggaaaac 7118130  T
Q  103 cagaaatgacct 114  Q
    | ||||||||||    
T  7118129 cggaaatgacct 7118118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 29313894 - 29313818
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||| |||||||||  |  |||||||||||||||||||||| |  |||||||  |||||||||    
T  29313894 gggtaaatcaaaacaaaaatgttttacagggta--aatcaaaataaaatttttacaggggagaaaaccgaaaatgacct 29313818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 29313929 - 29314020
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta-aggg-taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||| ||||||| ||||| |||  ||||||| |||| ||||| ||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  29313929 aaaaaaaaattgatttttgtttgacctattagagggataaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacag 29314020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 49872898 - 49872976
Alignment:
Q  36 gggtaaattaaaacaaaaatattttac-aggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| |||||||||||||||||| ||| | |||||||||||||||  ||||||| |  ||||||| ||||||||||    
T  49872898 gggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaaactttacag-ggggaaaaccggaaatgacct 49872976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 14248730 - 14248791
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttaca 63  Q
    |||| ||||||||||||| ||| ||||||||||||  ||||| ||||||||||||| |||||    
T  14248730 aaaaaaaaattggtttttgtttggcctattaaggggataaatcaaaacaaaaatatgttaca 14248791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 46902053 - 46902107
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    ||||||| ||||||||||||||||| | | | ||||||||||||||| |||||||    
T  46902053 ggtaaatcaaaacaaaaatattttatatggggtgaatcaaaataaaaattttaca 46902107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 27760449 - 27760526
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||| |   | ||||||||||||| ||||||||    
T  27760449 gtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacaaggagtaaatcaaaataaaaattttacag 27760526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 43767789 - 43767712
Alignment:
Q  16 gtttttattttgcctatta-agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||||  | | |||||||||||||  |||||||    
T  43767789 gtttttgtttggcctattagaggataaatcaaaacaaaaatattttacagaaggtaaatcaaaataaaaaatttacag 43767712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 44172900 - 44172991
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta---agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||| ||| ||||||||    |||||||| ||||||||||  ||||||||| | ||||| |||| ||||  |||||||    
T  44172900 aaaataaaattggtttttgtttggcctattagagggggtaaatcaaaacaaaaactttttacagggggtgaataaaaaaaaaaaatttacag 44172991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 44179600 - 44179691
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta---agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||| ||| ||||||||    |||||||| ||||||||||  ||||||||| | ||||| |||| ||||  |||||||    
T  44179600 aaaataaaattggtttttgtttggcctattagagggggtaaatcaaaacaaaaactttttacagggggtgaataaaaaaaaaaaatttacag 44179691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 47117478 - 47117526
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta-agggtaaattaaaacaa 51  Q
    |||||||||||||||||| ||| ||||||||  ||||||||||||||||    
T  47117478 aaaataaaattggtttttgtttggcctattagggggtaaattaaaacaa 47117526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 31532405 - 31532517
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    ||||| |||||||||||| ||| |||||||| ||  |||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||   ||||    
T  31532405 aaaattaaattggtttttgtttggcctattagggaggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagagggaaaaa 31532504  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  31532505 ccagaaatgacct 31532517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9043587 - 9043701
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaa 99  Q
    ||||||||||||| ||||||| |||  ||||||| ||| ||||| ||||||||||||||||||||| | ||||||||||||||| ||||| || |  |||    
T  9043587 aataaaataaaataggtttttgtttgacctattagggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttataggggggaa 9043686  T
Q  100 aaccagaaatgacct 114  Q
    |||||||||| ||||    
T  9043687 aaccagaaatcacct 9043701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 46561500 - 46561417
Alignment:
Q  29 ctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| |||||||| |||||||||||||||||||||   ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  46561500 ctattatgggtaaatcaaaacaaaaatattttacagggtgtgaatcaaaataaaaattttacagag--gaaaaccagaaatgacct 46561417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 4646900 - 4646789
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgat-gaatcaaaataaaatttttacagagatgaaa 100  Q
    |||| ||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | | |||||||||||||| ||||||||||  ||||    
T  4646900 aaaaaaaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacagaggggaaa 4646801  T
Q  101 accagaaatgac 112  Q
    |||| |||||||    
T  4646800 accaaaaatgac 4646789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 46136230 - 46136147
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||||||||||||||| ||| ||||| || ||| ||||| ||||||||||||||||||||| | |||||||||||||||    
T  46136230 aataaaataaaattggtttttgtttggcctactaggggataaatcaaaacaaaaatattttacaggaggtgaatcaaaataaaa 46136147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5330576 - 5330656
Alignment:
Q  11 aattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    ||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  5330576 aattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacaggtggtgaatcaaaataaaaatttta 5330656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 7112637 - 7112746
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||| |||||||||||||||||  |||||||  ||||||||| ||||||||||||||||||| || | ||||||||||||||| |||||||  |  ||||    
T  7112637 aaaaaaaaattggtttttatttgacctattagaagggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacatgg--gaaa 7112734  T
Q  101 accagaaatgac 112  Q
    ||||||||||||    
T  7112735 accagaaatgac 7112746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 21853556 - 21853446
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa--tttttacagagatgaaaa 101  Q
    |||| ||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||| | | |||||||| ||||   |||||||| || |||||    
T  21853556 aaaaaaaaattggtttttgtttggcctattg-gggtaaattaaaacaaaaatattttacagggggtaaatcaaaacaaaaatattttacag-gaggaaaa 21853459  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  21853458 ccagaaatgacct 21853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 47021978 - 47021869
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa-gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||||||||||||||| ||| ||||||||  |||||||| ||| ||||||||||||||| | | |||||||||||||||  |||| || ||  |||||    
T  47021978 aaaataaaattggtttttgtttggcctattagtgggtaaatcaaatcaaaaatattttacatggggtgaatcaaaataaaaaatttatagggagaaaaac 47021879  T
Q  103 cagaaatgac 112  Q
    ||||||||||    
T  47021878 cagaaatgac 47021869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 5348290 - 5348365
Alignment:
Q  10 aaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    |||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||||||| |||||||||||||||    
T  5348290 aaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacaggtggtgaatcaaaataaaa 5348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16699017 - 16699108
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttac 90  Q
    ||||||||||||||| ||||| ||| |||||||| ||| ||||| |||||||||||||||||||| | | ||||||||||||||| ||||||    
T  16699017 aataaaataaaattgatttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagtggggtgaatcaaaataaaaattttac 16699108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 27794508 - 27794617
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||||||||||||||||| ||| ||||||||   |||||||  ||||||||||||||||||| || | ||||||||||||||| |||||||| |  ||||    
T  27794508 aaaataaaattggtttttgtttggcctattaggggggtaaagcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacag-ggggaaa 27794606  T
Q  101 accagaaatga 111  Q
    |||||||||||    
T  27794607 accagaaatga 27794617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 5330550 - 5330462
Alignment:
Q  16 gtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaac 102  Q
    |||||| ||| |||||||| |||  ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| | |||||||    
T  5330550 gtttttgtttggcctattagggggataaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggtgaaaac 5330462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 13154719 - 13154640
Alignment:
Q  6 aataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaa 83  Q
    |||||||||||||||| ||| |||||||| ||| ||||| |||||||||||||||||||| | | |||||||||||||||    
T  13154719 aataaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaa 13154640  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 47021998 - 47022096
Alignment:
Q  16 gtttttattttgcctattaagggtaaattaaaacaaaaatattttacag-gtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||||  | | |||||||||||||||| |||||||||  ||||| || |||||||||    
T  47021998 gtttttgtttggcctatta-gggtaaatcaaaacaaaaatattttacaaaggggtgaatcaaaataaaatgtttacagagcggaaaatcataaatgacct 47022096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 36343301 - 36343411
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||| ||||||||||||| ||| ||||||||||||  ||||| ||||||||||||||||||||| | | |||  ||||||||  ||||||| |  | |||    
T  36343301 aaaaaaaaattggtttttgtttggcctattaagggggtaaatcaaaacaaaaatattttacagggggtaaat--aaataaaaaatttacagggggggaaa 36343398  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  36343399 ccagaaatgacct 36343411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 27794466 - 27794409
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||    
T  27794466 gggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaatttttacag 27794409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 28411067 - 28411174
Alignment:
Q  9 aaaattggtttttattttgcctattaa--gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagagatgaaaaccag 105  Q
    ||||||||||||| | | ||||||||   |||||||| ||||||||||||||||||| || | ||||||||||||||| |||||||| |   ||||||||    
T  28411067 aaaattggtttttgtctggcctattagaggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacag-gggaaaaaccag 28411165  T
Q  106 aaatgacct 114  Q
    |||||||||    
T  28411166 aaatgacct 28411174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 6540867 - 6540923
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  6540867 gggtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaaattttacag 6540923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 42736731 - 42736668
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttacagg 65  Q
    |||||||||||||||||| ||| ||||||||  || |||||| |||||||||||||||||||||    
T  42736731 aaaataaaattggtttttgtttggcctattaggagagtaaatcaaaacaaaaatattttacagg 42736668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 51904121 - 51904030
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacaga 93  Q
    ||||| || ||||||||| ||| |||||||| ||  |||||| ||||||||||||| ||||| | | ||||||||||||||| |||||||||    
T  51904121 aaaatgaatttggtttttgtttggcctattagggaggtaaatcaaaacaaaaatatattacacggggtgaatcaaaataaaaattttacaga 51904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 28724438 - 28724376
Alignment:
Q  4 aaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaatattttacag 64  Q
    |||| ||||||||||||| ||| ||||||||  ||||||||| ||||||||||||||||||||    
T  28724438 aaaaaaaaattggtttttgtttggcctattaggagggtaaatcaaaacaaaaatattttacag 28724376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40498166 - 40498073
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaa-tattttacaggtgatgaatcaaaataaaatttttaca 91  Q
    ||||||||||||||||||||| | |  |||||||  ||  ||||| |||||||||| ||||||||||| ||| ||||||||||||| |||||||    
T  40498166 aataaaataaaattggtttttgtctgacctattagtgggataaatcaaaacaaaaaatattttacaggagataaatcaaaataaaaattttaca 40498073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 21853947 - 21854004
Alignment:
Q  35 agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||| |||||||||||||||||||  |  ||||||||||||||| ||||||||    
T  21853947 agggtaaatcaaaacaaaaatattttacaaatagtgaatcaaaataaaaattttacag 21854004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 28724478 - 28724535
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||    
T  28724478 gggtaaatcaaaacaaaaatattttacagggggataaatcaaaataaaaattttacag 28724535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 50596114 - 50596167
Alignment:
Q  40 aaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacaga 93  Q
    |||| |||||||||||||||||| || |||||||||||||| || |||||||||    
T  50596114 aaatcaaaacaaaaatattttacgggggatgaatcaaaatataaattttacaga 50596167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 15790438 - 15790499
Alignment:
Q  53 aatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||||||||| |  ||||||||||||||| |||||||| | |||||||||||||||||||    
T  15790438 aatattttacaggagggtgaatcaaaataaaaattttacag-ggtgaaaaccagaaatgacct 15790499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 35167957 - 35168035
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | | ||| |||| |||  ||||||||||   ||||||| |||||||||    
T  35167957 gggtaaatcaaaacaaaaatattttacagggggtaaataaaaaaaaatattttacagagtgtaaaaccaaaaatgacct 35168035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 44826235 - 44826293
Alignment:
Q  8 taaaattggtttttattttgcctatta-agggtaaattaaaacaaaaatattttacagg 65  Q
    |||||||||||||| ||| ||||||||  |||||||| |||||||||| ||||||||||    
T  44826235 taaaattggtttttgtttggcctattagggggtaaatcaaaacaaaaacattttacagg 44826293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 15336486 - 15336435
Alignment:
Q  16 gtttttattttgcctattaaggg--taaattaaaacaaaaatattttacagg 65  Q
    |||||| ||| ||||||||||||  ||||| |||||||||||||||||||||    
T  15336486 gtttttgtttggcctattaagggaataaatcaaaacaaaaatattttacagg 15336435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 16698969 - 16698921
Alignment:
Q  45 aaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    ||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  16698969 aaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacag 16698921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 28811 - 28899
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaacc 103  Q
    |||||| ||| |||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||    
T  28811 gtttttgtttggcctattagggggtaaattaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagagaagaaaacc 28899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 28179 - 28101
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| | ||||||||| ||||| ||||||||||  |||||| |||||||||||    
T  28179 gggtaaatcaaaacaaaaatattttacagggggtgaatcaaagtaaaaattttacagaggggaaaacaagaaatgacct 28101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1319259 - 1319166
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagag 94  Q
    ||||||||||||||||||||| |||  ||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  1319259 aataaaataaaattggtttttgtttgacctattagggggtaaatcaaaacaaaaatattttacaggag-tgaatcaaaataaattttttacagag 1319166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 4840826 - 4840740
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaa--gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    |||||||||||||||||||||| | |||||||  |||||||| ||||||||||||||||||||| | ||||||||||||||| |||||    
T  4840826 aaaataaaattggtttttatttggtctattaagggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaatttta 4840740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13357502 - 13357593
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  13357502 aaaataaaattggtttttgtttggcctattaggggcgtaaatcaaaacaaaaatattttacagggggatgaattaaaataaaatttttacag 13357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 30245943 - 30245866
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||| ||| | ||||||||||||||| |||||||| || ||||||||||||||||||    
T  30245943 gggtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaaattttacag-gaggaaaaccagaaatgacct 30245866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 3593447 - 3593371
Alignment:
Q  37 ggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  3593447 ggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaaag-ggaaaaccagaaatgacct 3593371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 24062311 - 24062421
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacagagatgaaa 100  Q
    |||| ||||||||||||| ||| |||||||| |||  ||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||| |  ||||    
T  24062311 aaaaaaaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttaca-gtgagtgaatcaaaataaaaattttacaggg--gaaa 24062407  T
Q  101 accagaaatgacct 114  Q
    | ||||||||||||    
T  24062408 atcagaaatgacct 24062421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7054224 - 7054129
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg-taaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacagag 94  Q
    ||||||||||||| ||||||| |||  ||||||  ||| ||||| ||||||||||||||||||| || | ||||||||||||||| ||||||||||    
T  7054224 aataaaataaaataggtttttgtttgtcctatttggggataaatcaaaacaaaaatattttacagggaggtgaatcaaaataaaaattttacagag 7054129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 9286360 - 9286459
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| |||||||| ||| | ||| ||||||||||||||||||  | | ||||||||||||||| |||||||  || ||||||||||||||||||    
T  9286360 gtttttgtttggcctattagggggtgaatcaaaacaaaaatattttacttggggtgaatcaaaataaaaattttacaaggaggaaaaccagaaatgacct 9286459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 9286344 - 9286256
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttac 90  Q
    |||| ||||||||||||| ||| || ||||| ||   ||||| ||||||||||||||||||||| | ||||||||||||||| ||||||    
T  9286344 aaaaaaaaattggtttttgtttggcatattagggagataaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttac 9286256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 3593522 - 3593578
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  3593522 gggtaaatcaaaacaaaaatatttaacagggggtgaatcaaaataaaaattttacag 3593578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 7576185 - 7576137
Alignment:
Q  35 agggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaa 83  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||||    
T  7576185 agggtaaattaaaacaaaaatattttacaaggggtgaatcaaaataaaa 7576137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 33561873 - 33561936
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatattttacagg 65  Q
    |||||||||||||||||| ||| |||||||| |||  ||||| |||||||||||||||||||||    
T  33561873 aaaataaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatattttacagg 33561936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 18247109 - 18247044
Alignment:
Q  2 ataaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacagg 65  Q
    ||||||||||||||||||| |||| ||| |||| ||  |||||| |||||||||||||||||||||    
T  18247109 ataaaataaaattggttttcatttggcccattagggacgtaaatcaaaacaaaaatattttacagg 18247044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12321057 - 12321000
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtga-tgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||| | ||||||    
T  12321057 gggtaaatcaaaacaaaaatattttacaggggattgaatcaaaataaaaatattacag 12321000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 12321130 - 12321187
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacaga 93  Q
    |||||||| |||||||||||||||||||||   | ||||||||||||| |||||||||    
T  12321130 gggtaaatcaaaacaaaaatattttacaggatgtaaatcaaaataaaaattttacaga 12321187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 30246013 - 30246066
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    |||||||| ||||| ||||||||||||||| | ||||||||||||||| |||||    
T  30246013 gggtaaatcaaaactaaaatattttacagggggtgaatcaaaataaaaatttta 30246066  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 31885984 - 31886053
Alignment:
Q  40 aaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgac 112  Q
    |||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |  ||||| ||||||||||    
T  31885984 aaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttacaggg--gaaaatcagaaatgac 31886053  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 5334751 - 5334695
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||||| | | | ||||||||||||| ||||||||    
T  5334751 gggtaaatcaaaacaaaaatattttacaaggggtaaatcaaaataaaaattttacag 5334695  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31851905 - 31851960
Alignment:
Q  1 aataaaataaaattggtttttattttgcctatta--agggtaaattaaaacaaaaa 54  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||| ||||||||||    
T  31851905 aataaaataaaattggtttttgtttggcctattaggagggtaaatcaaaacaaaaa 31851960  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 17156934 - 17156887
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagggtaaattaaaacaa 51  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||||    
T  17156934 aaaataaaattggtttttatttggcctattagaggtaaatcaaaacaa 17156887  T

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Target: scaffold0809 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 3908 - 3798
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaagg--gtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaa 101  Q
    |||||||||||||||||| ||| |||||||| ||  |||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| ||   |||    
T  3908 aaaataaaattggtttttgtttggcctattatggaggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaaattttacag-gacagaaa 3811  T
Q  102 ccagaaatgacct 114  Q
    |||||||||||||    
T  3810 ccagaaatgacct 3798  T

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Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3926 - 3999
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaattttta 89  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  3926 gtttttgtttggcctattagggggtaaatcaaaacaaaaatattttacagg-ggtgaatcaaaataaaattttta 3999  T

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Target: scaffold0740 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 3754 - 3698
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  3754 gggtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaatttttacag 3698  T

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Target: scaffold0450 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 8044 - 8122
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacagg-tgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||| | ||||||| ||  ||||||||||||||||||    
T  8044 gggtaaatcaaaacaaaaatattttacaggatggtgaatcaaaataacaattttaca-aggggaaaaccagaaatgacct 8122  T

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Target: scaffold0450; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8005 - 7891
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatatttta---caggtgatgaatcaaaataaaatttttacagaga 95  Q
    ||||||||||| ||||||||| |||  ||||||| |||  ||||| |||||||||||||||||   |||| | ||||||||||||||| |||||||| |     
T  8005 aataaaataaa-ttggtttttgtttgacctattatgggggtaaatcaaaacaaaaatattttattacagggggtgaatcaaaataaaaattttacag-gg 7908  T
Q  96 tgaaaaccagaaatgac 112  Q
     ||||||||||||||||    
T  7907 ggaaaaccagaaatgac 7891  T

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Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 2869 - 2799
Alignment:
Q  45 aaaacaaaaatattttacaggt-gatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||||||||||||||||||  | ||||||||||| ||| |||||||| ||||||||||| |||||||||    
T  2869 aaaacaaaaatattttacagggagctgaatcaaaattaaaattttacagggatgaaaaccaaaaatgacct 2799  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 38178 - 38080
Alignment:
Q  16 gtttttattttgcctattaaggg-taaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacagagatgaaaaccagaaatgacct 114  Q
    |||||| ||| |||||||| ||| ||||| ||||||||||||||||||| | | ||||||||||||||| |||| ||| |  ||||| ||||||||||||    
T  38178 gtttttgtttagcctattagggggtaaatcaaaacaaaaatattttacacggggtgaatcaaaataaaaattttgcag-ggggaaaatcagaaatgacct 38080  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 91230 - 91286
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| |||| |||||||||||||||  | ||||||||||||||| ||||||||    
T  91230 gggtaaatcaaaataaaaatattttacagagggtgaatcaaaataaaaattttacag 91286  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 549 - 488
Alignment:
Q  1 aataaaataaaattggtttttattttgcctattaagggtaaattaaaacaaaaatattttac 62  Q
    ||||||||||||||||||||| |||  ||||||| || |||||  ||||||||| |||||||    
T  549 aataaaataaaattggtttttgtttgacctattagggataaatcgaaacaaaaacattttac 488  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 4611 - 4668
Alignment:
Q  36 gggtaaattaaaacaaaaatattttaca-ggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||||||||||| | || | ||||||||||||||| ||||||||    
T  4611 gggtaaatcaaaacaaaaatattttatagggggttgaatcaaaataaaaattttacag 4668  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 4379 - 4434
Alignment:
Q  36 gggtaaattaaaacaaaaatattttacaggtgatgaatcaaaataaaatttttacag 92  Q
    |||||||| ||||||||| ||||||||||  | |||||||||||||| |||||||||    
T  4379 gggtaaatcaaaacaaaattattttacagcgg-tgaatcaaaataaattttttacag 4434  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 26450 - 26509
Alignment:
Q  4 aaaataaaattggtttttattttgcctattaaggg--taaattaaaacaaaaatatttta 61  Q
    |||| ||||||||||||| ||| |||||||| |||  ||||| |||||||||||||||||    
T  26450 aaaaaaaaattggtttttgtttggcctattaggggggtaaatcaaaacaaaaatatttta 26509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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