View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2445_high_1 (Length: 378)

Name: NF2445_high_1
Description: NF2445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2445_high_1
NF2445_high_1
[»] chr2 (54 HSPs)
chr2 (12-363)||(39878048-39878396)
chr2 (68-363)||(26560638-26560932)
chr2 (154-363)||(23806037-23806246)
chr2 (136-363)||(15106134-15106361)
chr2 (137-363)||(17850670-17850896)
chr2 (66-363)||(20498746-20499039)
chr2 (154-363)||(22263275-22263484)
chr2 (67-363)||(42670803-42671097)
chr2 (66-363)||(19251470-19251764)
chr2 (154-363)||(13284492-13284701)
chr2 (136-363)||(26135884-26136111)
chr2 (136-315)||(23854798-23854977)
chr2 (154-363)||(17463176-17463385)
chr2 (80-363)||(33290061-33290343)
chr2 (251-363)||(26236277-26236389)
chr2 (154-257)||(26236212-26236314)
chr2 (271-363)||(13254638-13254730)
chr2 (251-363)||(30390543-30390655)
chr2 (304-363)||(42670954-42671013)
chr2 (67-212)||(23806187-23806330)
chr2 (67-212)||(17850587-17850729)
chr2 (305-363)||(17850822-17850880)
chr2 (136-212)||(15106302-15106378)
chr2 (304-363)||(13284643-13284702)
chr2 (66-212)||(19251705-19251848)
chr2 (304-363)||(22263426-22263485)
chr2 (304-363)||(23806036-23806095)
chr2 (304-363)||(23854901-23854960)
chr2 (304-363)||(26236211-26236270)
chr2 (67-122)||(39878397-39878450)
chr2 (304-362)||(26560789-26560847)
chr2 (66-122)||(17463415-17463470)
chr2 (304-360)||(20498832-20498888)
chr2 (65-212)||(26236330-26236474)
chr2 (304-348)||(33290148-33290192)
chr2 (154-205)||(13254582-13254633)
chr2 (304-363)||(17463175-17463234)
chr2 (304-363)||(26135901-26135960)
chr2 (304-363)||(39878186-39878245)
chr2 (305-363)||(15106151-15106209)
chr2 (154-212)||(26560639-26560697)
chr2 (154-212)||(30390544-30390602)
chr2 (154-208)||(34548658-34548712)
chr2 (81-122)||(12419046-12419087)
chr2 (81-122)||(12431106-12431147)
chr2 (66-119)||(17850913-17850965)
chr2 (91-120)||(21482205-21482234)
chr2 (66-119)||(22263520-22263572)
chr2 (154-190)||(13254693-13254729)
chr2 (311-363)||(19251554-19251606)
chr2 (136-212)||(20498980-20499056)
chr2 (136-212)||(22263258-22263334)
chr2 (67-115)||(23855025-23855072)
chr2 (66-122)||(26236126-26236181)
[»] chr7 (56 HSPs)
chr7 (66-363)||(41600042-41600337)
chr7 (67-363)||(20419620-20419915)
chr7 (66-363)||(12006624-12006919)
chr7 (154-363)||(23704746-23704955)
chr7 (66-363)||(48672363-48672658)
chr7 (136-363)||(20458775-20459002)
chr7 (136-363)||(38879808-38880035)
chr7 (66-363)||(20963579-20963872)
chr7 (66-363)||(28218263-28218542)
chr7 (152-363)||(44816919-44817130)
chr7 (136-362)||(23383585-23383811)
chr7 (154-363)||(31851323-31851532)
chr7 (154-363)||(10409459-10409668)
chr7 (154-363)||(7658055-7658262)
chr7 (81-362)||(1250291-1250571)
chr7 (67-292)||(6465855-6466077)
chr7 (172-363)||(33162638-33162829)
chr7 (66-257)||(25772522-25772710)
chr7 (219-363)||(24194941-24195090)
chr7 (258-363)||(25772447-25772552)
chr7 (251-363)||(48648345-48648457)
chr7 (136-257)||(48648420-48648540)
chr7 (66-211)||(28218177-28218321)
chr7 (305-363)||(16995283-16995341)
chr7 (304-363)||(6465938-6465997)
chr7 (136-211)||(7658038-7658113)
chr7 (304-363)||(38879959-38880018)
chr7 (305-363)||(12006776-12006834)
chr7 (305-363)||(41600194-41600252)
chr7 (67-212)||(38879723-38879867)
chr7 (134-217)||(16995264-16995347)
chr7 (66-212)||(23704896-23705039)
chr7 (304-362)||(1250441-1250499)
chr7 (66-212)||(20458691-20458834)
chr7 (305-363)||(28218399-28218457)
chr7 (305-363)||(48672515-48672573)
chr7 (66-122)||(12006540-12006595)
chr7 (136-212)||(48672346-48672422)
chr7 (304-363)||(7658204-7658263)
chr7 (66-212)||(10409609-10409752)
chr7 (67-122)||(20419536-20419590)
chr7 (304-363)||(23704745-23704804)
chr7 (304-363)||(25772566-25772625)
chr7 (304-363)||(48648464-48648523)
chr7 (154-212)||(24195031-24195089)
chr7 (154-212)||(44816920-44816978)
chr7 (66-119)||(14795549-14795601)
chr7 (66-119)||(15242541-15242593)
chr7 (67-116)||(23704662-23704710)
chr7 (66-122)||(14646974-14647029)
chr7 (151-191)||(24194977-24195017)
chr7 (326-362)||(24194980-24195016)
chr7 (251-291)||(28218257-28218297)
chr7 (67-119)||(38880048-38880099)
chr7 (68-119)||(44816832-44816884)
chr7 (251-291)||(44816913-44816953)
[»] chr1 (58 HSPs)
chr1 (66-363)||(24467628-24467921)
chr1 (66-363)||(18462285-18462578)
chr1 (136-363)||(52058095-52058319)
chr1 (154-363)||(39711157-39711366)
chr1 (91-363)||(4907046-4907317)
chr1 (136-363)||(17606375-17606602)
chr1 (67-363)||(39826134-39826424)
chr1 (66-363)||(33628774-33629069)
chr1 (154-362)||(13229817-13230024)
chr1 (136-363)||(48072028-48072255)
chr1 (151-363)||(42510098-42510310)
chr1 (136-363)||(30299298-30299525)
chr1 (136-363)||(43539414-43539641)
chr1 (154-363)||(20995754-20995962)
chr1 (67-363)||(39970730-39971024)
chr1 (66-363)||(29696564-29696852)
chr1 (155-363)||(8292890-8293101)
chr1 (198-363)||(7473876-7474037)
chr1 (252-363)||(34749221-34749332)
chr1 (154-257)||(34749296-34749398)
chr1 (200-315)||(215044-215159)
chr1 (136-212)||(39970713-39970789)
chr1 (304-363)||(4907197-4907256)
chr1 (154-257)||(16294137-16294240)
chr1 (308-363)||(17606392-17606447)
chr1 (155-241)||(30780270-30780356)
chr1 (136-212)||(24467862-24467938)
chr1 (136-212)||(52058078-52058154)
chr1 (66-212)||(20995903-20996046)
chr1 (304-363)||(33628925-33628984)
chr1 (304-363)||(34749340-34749399)
chr1 (304-363)||(39711156-39711215)
chr1 (304-363)||(43539431-43539490)
chr1 (66-212)||(8293042-8293187)
chr1 (66-212)||(17606543-17606685)
chr1 (154-212)||(18462519-18462577)
chr1 (304-362)||(42510249-42510307)
chr1 (134-212)||(48072196-48072274)
chr1 (139-212)||(7473862-7473935)
chr1 (304-361)||(8292890-8292947)
chr1 (66-122)||(4906961-4907016)
chr1 (66-122)||(39711396-39711451)
chr1 (67-122)||(18342341-18342395)
chr1 (304-363)||(24467712-24467771)
chr1 (60-122)||(30252222-30252285)
chr1 (66-121)||(33628689-33628743)
chr1 (325-363)||(42510166-42510204)
chr1 (321-363)||(52058260-52058302)
chr1 (219-256)||(16294211-16294247)
chr1 (81-122)||(17502053-17502094)
chr1 (251-292)||(24467886-24467927)
chr1 (154-211)||(29696794-29696851)
chr1 (251-292)||(52058089-52058130)
chr1 (136-212)||(4907029-4907105)
chr1 (70-122)||(17606307-17606358)
chr1 (66-122)||(20995697-20995752)
chr1 (136-212)||(39826117-39826193)
chr1 (136-212)||(42510081-42510157)
[»] chr8 (51 HSPs)
chr8 (66-363)||(10108369-10108664)
chr8 (138-363)||(42113068-42113293)
chr8 (154-363)||(17622971-17623180)
chr8 (154-363)||(21148021-21148229)
chr8 (154-363)||(7689608-7689817)
chr8 (66-363)||(30789591-30789886)
chr8 (161-363)||(43851748-43851950)
chr8 (154-363)||(14767591-14767800)
chr8 (66-363)||(26136684-26136979)
chr8 (66-363)||(5554868-5555163)
chr8 (136-362)||(2583387-2583613)
chr8 (67-363)||(14820295-14820588)
chr8 (154-363)||(22494470-22494678)
chr8 (154-363)||(42605838-42606047)
chr8 (210-363)||(26532867-26533020)
chr8 (154-355)||(43481406-43481607)
chr8 (66-212)||(21147935-21148080)
chr8 (225-363)||(22848402-22848540)
chr8 (304-363)||(10108454-10108513)
chr8 (66-209)||(17622889-17623027)
chr8 (67-212)||(43851665-43851807)
chr8 (136-212)||(30789574-30789650)
chr8 (136-212)||(42113051-42113127)
chr8 (136-215)||(5555101-5555180)
chr8 (304-363)||(14820378-14820437)
chr8 (61-212)||(14820529-14820678)
chr8 (304-363)||(17623122-17623181)
chr8 (304-362)||(5554954-5555012)
chr8 (305-363)||(30789743-30789801)
chr8 (57-119)||(42606080-42606141)
chr8 (66-207)||(10171383-10171522)
chr8 (67-120)||(18044153-18044205)
chr8 (154-231)||(21144721-21144798)
chr8 (81-122)||(40487738-40487779)
chr8 (304-363)||(2583404-2583463)
chr8 (304-363)||(21144740-21144799)
chr8 (304-363)||(21148171-21148230)
chr8 (305-363)||(7689607-7689665)
chr8 (154-212)||(7689758-7689816)
chr8 (66-120)||(7689849-7689902)
chr8 (66-212)||(10108605-10108749)
chr8 (154-212)||(26136920-26136978)
chr8 (66-179)||(2583588-2583700)
chr8 (328-365)||(22494570-22494607)
chr8 (136-212)||(14767574-14767650)
chr8 (66-122)||(20877069-20877124)
chr8 (66-122)||(21148260-21148315)
chr8 (251-291)||(26136945-26136985)
chr8 (66-122)||(26137008-26137063)
chr8 (66-122)||(35367409-35367464)
chr8 (136-180)||(39889629-39889673)
[»] chr4 (60 HSPs)
chr4 (136-363)||(9516694-9516921)
chr4 (136-363)||(13132025-13132252)
chr4 (70-363)||(3018014-3018306)
chr4 (66-363)||(46046508-46046802)
chr4 (66-363)||(37012791-37013085)
chr4 (136-363)||(9396766-9396993)
chr4 (136-363)||(34064066-34064293)
chr4 (154-363)||(3273707-3273914)
chr4 (136-363)||(7819081-7819308)
chr4 (70-363)||(38574052-38574343)
chr4 (136-363)||(15640782-15641009)
chr4 (137-363)||(4355949-4356175)
chr4 (81-363)||(9618993-9619273)
chr4 (81-363)||(31943962-31944244)
chr4 (154-363)||(31090145-31090354)
chr4 (155-363)||(18667375-18667583)
chr4 (136-363)||(48579950-48580177)
chr4 (136-363)||(18713027-18713254)
chr4 (154-257)||(26252353-26252456)
chr4 (219-363)||(48259901-48260045)
chr4 (68-257)||(35376164-35376347)
chr4 (273-363)||(35376332-35376422)
chr4 (251-363)||(26252418-26252531)
chr4 (154-233)||(41947070-41947149)
chr4 (304-362)||(9396784-9396842)
chr4 (304-363)||(3018096-3018155)
chr4 (304-363)||(34064217-34064276)
chr4 (70-212)||(13131943-13132084)
chr4 (61-122)||(31218305-31218365)
chr4 (66-122)||(9619303-9619358)
chr4 (136-212)||(15640950-15641026)
chr4 (68-180)||(34063983-34064093)
chr4 (304-363)||(4355965-4356024)
chr4 (304-363)||(9619064-9619123)
chr4 (304-363)||(26252352-26252411)
chr4 (60-122)||(46046423-46046484)
chr4 (305-363)||(46046660-46046718)
chr4 (81-208)||(35376367-35376492)
chr4 (136-212)||(37012774-37012850)
chr4 (136-212)||(38574035-38574111)
chr4 (66-122)||(41946964-41947019)
chr4 (136-212)||(48259986-48260062)
chr4 (66-212)||(9396934-9397077)
chr4 (304-363)||(18713044-18713103)
chr4 (67-118)||(26252565-26252615)
chr4 (304-363)||(35376246-35376305)
chr4 (304-363)||(37012942-37013001)
chr4 (154-212)||(3273855-3273913)
chr4 (154-212)||(7819249-7819307)
chr4 (66-116)||(18667620-18667669)
chr4 (305-363)||(38574204-38574262)
chr4 (93-122)||(12520662-12520691)
chr4 (321-362)||(12904831-12904872)
chr4 (304-361)||(18667375-18667432)
chr4 (68-120)||(9516611-9516662)
chr4 (152-180)||(12904829-12904857)
chr4 (136-180)||(18713227-18713271)
chr4 (137-209)||(20069538-20069610)
chr4 (154-210)||(43312294-43312350)
chr4 (66-122)||(48259822-48259877)
[»] chr5 (49 HSPs)
chr5 (136-362)||(7126002-7126228)
chr5 (66-362)||(17762282-17762575)
chr5 (67-363)||(24837253-24837547)
chr5 (66-363)||(24074302-24074596)
chr5 (136-363)||(6817206-6817432)
chr5 (66-363)||(14143901-14144195)
chr5 (136-363)||(993831-994057)
chr5 (154-363)||(4919074-4919283)
chr5 (68-363)||(41001437-41001729)
chr5 (154-363)||(20709296-20709505)
chr5 (136-363)||(29444873-29445100)
chr5 (209-363)||(23979042-23979195)
chr5 (154-363)||(24650784-24650992)
chr5 (154-363)||(31799724-31799933)
chr5 (66-257)||(14411696-14411885)
chr5 (67-363)||(18336467-18336750)
chr5 (154-363)||(22571161-22571370)
chr5 (251-363)||(14411847-14411960)
chr5 (136-257)||(27159147-27159268)
chr5 (276-363)||(30512371-30512459)
chr5 (276-363)||(30552711-30552799)
chr5 (251-363)||(27159074-27159185)
chr5 (66-212)||(6817122-6817265)
chr5 (67-212)||(23979136-23979279)
chr5 (304-363)||(7126152-7126211)
chr5 (304-363)||(14411781-14411840)
chr5 (304-363)||(24074387-24074446)
chr5 (136-212)||(7125984-7126060)
chr5 (136-212)||(20709279-20709355)
chr5 (304-363)||(14143985-14144044)
chr5 (304-363)||(17762366-17762425)
chr5 (304-363)||(29444890-29444949)
chr5 (81-190)||(22571090-22571198)
chr5 (136-212)||(24650767-24650843)
chr5 (66-122)||(24837168-24837223)
chr5 (247-291)||(30512361-30512405)
chr5 (247-291)||(30552701-30552745)
chr5 (304-363)||(24650934-24650993)
chr5 (81-120)||(29445131-29445170)
chr5 (304-363)||(31799875-31799934)
chr5 (66-180)||(17762549-17762661)
chr5 (66-120)||(24651025-24651078)
chr5 (154-212)||(27159075-27159133)
chr5 (66-119)||(7126244-7126296)
chr5 (66-119)||(27158990-27159042)
chr5 (67-180)||(31799640-31799751)
chr5 (154-190)||(20947059-20947095)
chr5 (326-362)||(41001610-41001646)
chr5 (156-208)||(41424603-41424655)
[»] chr3 (70 HSPs)
chr3 (66-363)||(45969914-45970209)
chr3 (136-363)||(43572456-43572685)
chr3 (66-363)||(14171670-14171965)
chr3 (66-363)||(30500125-30500419)
chr3 (154-361)||(19112851-19113058)
chr3 (154-363)||(21632981-21633190)
chr3 (66-363)||(49986526-49986822)
chr3 (67-363)||(14161871-14162165)
chr3 (66-363)||(14262120-14262415)
chr3 (154-363)||(15328545-15328754)
chr3 (66-363)||(16721990-16722285)
chr3 (66-363)||(9267059-9267353)
chr3 (68-363)||(52552776-52553065)
chr3 (154-363)||(35995762-35995971)
chr3 (156-363)||(4204792-4204999)
chr3 (136-363)||(33372473-33372698)
chr3 (136-362)||(20853781-20854007)
chr3 (136-362)||(45003563-45003789)
chr3 (136-362)||(38283617-38283843)
chr3 (67-363)||(5800605-5800899)
chr3 (66-363)||(17465452-17465746)
chr3 (138-363)||(47575357-47575581)
chr3 (66-280)||(11003731-11003943)
chr3 (136-233)||(17649224-17649321)
chr3 (136-212)||(4204775-4204851)
chr3 (67-212)||(14162106-14162248)
chr3 (136-212)||(38283785-38283861)
chr3 (304-363)||(14161955-14162014)
chr3 (136-215)||(43572623-43572702)
chr3 (304-363)||(47575507-47575566)
chr3 (304-363)||(52552923-52552982)
chr3 (66-212)||(9266974-9267118)
chr3 (305-363)||(33372490-33372548)
chr3 (304-366)||(35995913-35995975)
chr3 (66-122)||(16722315-16722370)
chr3 (66-122)||(19112763-19112818)
chr3 (58-122)||(35741908-35741971)
chr3 (304-363)||(5800689-5800748)
chr3 (304-363)||(14262271-14262330)
chr3 (64-122)||(27946189-27946246)
chr3 (66-212)||(35995677-35995821)
chr3 (81-180)||(14262049-14262147)
chr3 (304-363)||(16722075-16722134)
chr3 (328-363)||(19112920-19112955)
chr3 (304-363)||(19113000-19113059)
chr3 (67-122)||(19720333-19720387)
chr3 (304-363)||(20853931-20853990)
chr3 (304-363)||(21632980-21633039)
chr3 (304-363)||(30500276-30500335)
chr3 (308-363)||(45003580-45003635)
chr3 (328-363)||(45970103-45970138)
chr3 (305-363)||(14171822-14171880)
chr3 (66-180)||(20853694-20853807)
chr3 (86-180)||(21633163-21633256)
chr3 (304-362)||(38283635-38283693)
chr3 (80-118)||(46850513-46850551)
chr3 (251-292)||(4204786-4204827)
chr3 (326-363)||(43572473-43572510)
chr3 (251-292)||(43572650-43572691)
chr3 (151-212)||(45003731-45003792)
chr3 (66-179)||(45970183-45970295)
chr3 (304-360)||(4204943-4204999)
chr3 (136-212)||(14171653-14171729)
chr3 (136-212)||(15328695-15328771)
chr3 (251-291)||(21633156-21633196)
chr3 (136-212)||(30500108-30500184)
chr3 (81-121)||(35740830-35740870)
chr3 (251-291)||(35995756-35995796)
chr3 (66-122)||(35995999-35996054)
chr3 (136-212)||(52552759-52552835)
[»] scaffold0809 (3 HSPs)
scaffold0809 (136-363)||(1477-1704)
scaffold0809 (304-363)||(1494-1553)
scaffold0809 (65-122)||(1730-1786)
[»] chr6 (38 HSPs)
chr6 (66-363)||(24731934-24732232)
chr6 (67-363)||(9481182-9481476)
chr6 (154-363)||(30458985-30459194)
chr6 (154-363)||(10321814-10322024)
chr6 (155-363)||(26385362-26385566)
chr6 (136-363)||(30618029-30618255)
chr6 (154-363)||(2299395-2299602)
chr6 (203-363)||(33714571-33714731)
chr6 (152-318)||(3229992-3230157)
chr6 (155-363)||(14680966-14681174)
chr6 (242-363)||(18500398-18500520)
chr6 (252-363)||(32017620-32017731)
chr6 (154-257)||(33637644-33637747)
chr6 (154-287)||(18500506-18500640)
chr6 (66-257)||(32017695-32017882)
chr6 (251-363)||(33637709-33637822)
chr6 (205-287)||(17142798-17142880)
chr6 (304-363)||(9854122-9854181)
chr6 (154-212)||(9854122-9854180)
chr6 (136-198)||(19284196-19284258)
chr6 (136-212)||(30458968-30459044)
chr6 (304-363)||(9481266-9481325)
chr6 (304-363)||(10321966-10322025)
chr6 (304-363)||(30618046-30618105)
chr6 (304-363)||(33637643-33637702)
chr6 (136-212)||(14680949-14681025)
chr6 (68-120)||(19284130-19284181)
chr6 (66-212)||(18500314-18500457)
chr6 (304-363)||(18500582-18500641)
chr6 (304-363)||(32017739-32017798)
chr6 (154-212)||(9481417-9481475)
chr6 (136-190)||(17142744-17142798)
chr6 (66-120)||(18500655-18500708)
chr6 (81-122)||(10321746-10321787)
chr6 (136-173)||(15942410-15942447)
chr6 (326-363)||(19284213-19284250)
chr6 (61-110)||(24732273-24732321)
chr6 (70-122)||(26385598-26385649)
[»] scaffold0361 (2 HSPs)
scaffold0361 (66-363)||(4561-4857)
scaffold0361 (66-122)||(4886-4941)
[»] scaffold0141 (3 HSPs)
scaffold0141 (159-363)||(8413-8616)
scaffold0141 (81-212)||(8557-8687)
scaffold0141 (66-121)||(8324-8378)
[»] scaffold0185 (3 HSPs)
scaffold0185 (134-363)||(3953-4182)
scaffold0185 (66-210)||(3868-4010)
scaffold0185 (304-363)||(4104-4163)
[»] scaffold0881 (1 HSPs)
scaffold0881 (154-362)||(305-512)
[»] scaffold0449 (2 HSPs)
scaffold0449 (66-257)||(7389-7579)
scaffold0449 (258-363)||(7310-7420)
[»] scaffold0477 (3 HSPs)
scaffold0477 (273-363)||(4952-5042)
scaffold0477 (66-120)||(4879-4932)
scaffold0477 (219-257)||(4929-4967)
[»] scaffold0176 (3 HSPs)
scaffold0176 (154-280)||(15800-15925)
scaffold0176 (304-363)||(15867-15926)
scaffold0176 (66-119)||(15955-16007)
[»] scaffold0117 (2 HSPs)
scaffold0117 (72-212)||(12217-12355)
scaffold0117 (304-363)||(12217-12276)
[»] scaffold0352 (3 HSPs)
scaffold0352 (66-122)||(4666-4721)
scaffold0352 (251-287)||(4745-4781)
scaffold0352 (66-122)||(6003-6058)
[»] scaffold0157 (1 HSPs)
scaffold0157 (93-122)||(226-255)


Alignment Details
Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 12 - 363
Target Start/End: Original strand, 39878048 - 39878396
Alignment:
Q  12 atgaaagtataaataaacgtagaagaaaggtatactaatagacatgaaaaatagagggtaaatacctcttttttgtccgtgtaatattagcgaattccag 111  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |    
T  39878048 atgaaagtataaataaacgtagaagaaaagtatactaatagacatgaaaaatagagggtaaatacct--tttttgtccttgtaatattagcgaattccgg 39878145  T
Q  112 ttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcat 211  Q
    ||||||||||| |        |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39878146 ttttagtccctgtaaaaaaa-gatatttagattatgtatctgtaatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcat 39878244  T
Q  212 aaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcaga 311  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39878245 aaattacgtccctgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcaga 39878344  T
Q  312 ttctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39878345 ttctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattac 39878396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 68 - 363
Target Start/End: Complemental strand, 26560932 - 26560638
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattct 167  Q
    ||||||||||||||||  |||| |||||||||||||||||||  ||||||||||  |         | | ||||||| |||   |||||||||| |||||    
T  26560932 ggtaaatacctcttttc-gtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattct 26560834  T
Q  168 tccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcaga 267  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||||| |    
T  26560833 tccacttttggtctctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaa 26560734  T
Q  268 ttactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    || ||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||    
T  26560733 ttcctccacttttgatccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattac 26560638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 23806037 - 23806246
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  23806037 taattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcataaattacgtccctgtaatttcagattcctcccacttttggtc 23806136  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||| ||||||| ||||||||||||||||||||| |||    
T  23806137 cctataatttcagattcctccacttttggtccctcattttacgtgccatgtatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaat 23806236  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  23806237 atgaaattac 23806246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 15106134 - 15106361
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||| ||||| |||||||||||||| |||||||||||| |||||| |||||||||| ||||| ||||||||||||||| |    
T  15106134 atttagattttgtccctgtaattttagattattccacttttggtccctcctttcatcacgtcagctaaatctgcatcaattaagtccttgtaatttcaga 15106233  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| ||||| ||||||| |||||||    
T  15106234 ttcctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagattttgctgacgtggtggaatgagg 15106333  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    || ||||||||||| |||||||||||||    
T  15106334 gatcaaaagtggaagaatctgaaattac 15106361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 137 - 363
Target Start/End: Complemental strand, 17850896 - 17850670
Alignment:
Q  137 tttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatat 236  Q
    |||||||| |||  || ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccctcttttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagat 17850797  T
Q  237 tcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgaggg 336  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||| ||  ||| |||||||||||||||| ||||||| ||||||||    
T  17850796 tcctcccacttttggttcctttaatttcagattcctccacttttgatccctcattttaggtaccatgtatgcagattctgctgacgtggtggaatgaggg 17850697  T
Q  337 accaaaagtggaaaaatctgaaattac 363  Q
    | ||||||||||| ||||| |||||||    
T  17850696 atcaaaagtggaagaatcttaaattac 17850670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 20498746 - 20499039
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||  ||||||||||||||||| | |||||||||||| |         |||||||||||||||  || || |||||||||    
T  20498746 agggtaaatacctcttttc-gtctatgtaatattagcgaattacggttttagtccctgtaaaaaaa--atatttagattatgtccctgta-tttcagatt 20498841  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| ||||||| |||| ||||| | |||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||    
T  20498842 cttccacttttggtccctccttttatcacgtcagtagaatctgcataaattacgtcaatataatttcatattcctcccacttttggtccctgtaatttca 20498941  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| |||||||||||| ||||||||||||||||  || ||||||||||||||||  |||||||||||| |||||||||||| || |||||||||||||    
T  20498942 gatcactccacttttgatccctcattttacgtgctatgtatgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattac 20499039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 22263484 - 22263275
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||| | ||||||||    
T  22263484 taatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcataaattacgtccctgtaatttcagattcctcctagttttggtc 22263385  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| |||    
T  22263384 cctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaat 22263285  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  22263284 atgaaattac 22263275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 67 - 363
Target Start/End: Complemental strand, 42671097 - 42670803
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||| |||| |||| |||||||||||| |||||||||||||| |        |  |||||||||||||  || |||||||| |||     
T  42671097 gggtaaatacctcttttt-gtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaagg-atttagattatgtccctgtaatttcatattt 42671000  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||||||||| | |||||||||| |||||||| | ||||||||||| ||||||||     
T  42670999 ttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcctagttttggtccctgtaatttcaa 42670900  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||||| |||||||||||||||||||||| ||| || ||| ||| ||||| ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  42670899 attcctccatttttggtccctcattttacgtgccatgtaagcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattac 42670803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 19251470 - 19251764
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||  |||| ||||||||||||||||| | |||||||||||| |        |||  ||||||| |||  || |||||||| |||    
T  19251470 agggttaatacctcttttc-gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagat--ttagattttgtccctgtaatttcatatt 19251566  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| ||||||||||||  |||||| ||| | ||||||||| || |||||||||||| |||||||| ||||||| ||||| ||||||||    
T  19251567 cttccacttttggtccctcctttcatcacatcagcagaatatacataaattatgttcttgtaatttcaaattcctccaacttttgatccctgtaatttca 19251666  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| ||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||    
T  19251667 tattcctccacttttggtccatcattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattac 19251764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 13284701 - 13284492
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||| ||||||||||||| ||| ||| | || |||| || ||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  13284701 taatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacataaattacgtccttgtaatttaagattcctcccacttttggtc 13284602  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| || ||||||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||| |||||||||| |||    
T  13284601 cctgtaatttcatatttcttcacttttggtccctcatttcacgtgtcatgtatgcagattctgttgtcgtggtgaaatgagggactaaaagtggaagaat 13284502  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  13284501 atgaaattac 13284492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 26135884 - 26136111
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| |    
T  26135884 atttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcaga 26135983  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||| |||||||||||| | |||||| ||||| ||||||||||||||||| |||||||||  ||| |||||||||||||||  |||| || || |||     
T  26135984 ttcctctcacttttggtccttgtaattttagattcctccacttttggtcccttattttacgtaccatgtatgcagattctgcttacgtgatggaacgaga 26136083  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    || ||||||||||| ||| |||||||||    
T  26136084 gatcaaaagtggaagaatatgaaattac 26136111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 136 - 315
Target Start/End: Complemental strand, 23854977 - 23854798
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| ||| ||| |||||| | |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 23854878  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattct 315  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  23854877 ttcctcccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagattct 23854798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 17463176 - 17463385
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||| |||| |||||||||||| ||| ||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  17463176 taatttcaggttctcccacttttggtccctcatttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtc 17463275  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||| ||||| ||| | ||||||||||||||||||| || ||| |||||||||||||||  | ||||| ||||||||| ||||||||||| |||    
T  17463276 cctgtaattttagattcctctaattttggtccctcattttacatgccatgtatgcagattctgcttacatggtggaatgagggatcaaaagtggaagaat 17463375  T
Q  354 ctgaaattac 363  Q
     || ||||||    
T  17463376 atgcaattac 17463385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 33290061 - 33290343
Alignment:
Q  80 ttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggt 179  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |         | ||||||||| |||   | |||||||| | || ||||||||||||    
T  33290061 tttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaa-atttagattctgtccttgtaatttcatactcctccacttttggt 33290159  T
Q  180 cactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttt 279  Q
    | ||  ||| | || ||||||| |||||||||||||| ||||| |||||||||| ||||||||| |||||||||||| |||||||||||  |||||||||    
T  33290160 cccttatttaaccacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcccccttttggtccctgtaatttcagatacctccacttt 33290259  T
Q  280 tggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| | | | ||| |||||||||| |  || ||||||||||| ||||||||||||||||| ||| |||||||||    
T  33290260 tggtccctcatttcatgagccatgtatgcagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattac 33290343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 26236277 - 26236389
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaa 350  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||| |||||     
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaaatggaag 26236376  T
Q  351 aatctgaaattac 363  Q
    |||||||||||||    
T  26236377 aatctgaaattac 26236389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 26236212 - 26236314
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  26236212 taatttcagattctttcacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcatattcct-ccacttttggtc 26236310  T
Q  254 cctc 257  Q
    ||||    
T  26236311 cctc 26236314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 13254638 - 13254730
Alignment:
Q  271 ctccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||   |||||||||||||||||||||||||||| |||||||||||||    
T  13254638 ctccacttttggtccctcattttacgtgtcatgtatactgattctgcttatgtggtgaaatgagggaccaaaagtggaagaatctgaaattac 13254730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 251 - 363
Target Start/End: Complemental strand, 30390655 - 30390543
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaa 350  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||  || |||||||||| ||||  ||||||| |||||||||||||||||||||     
T  30390655 gtccctgtaatttcagattccttcatttttggtccctcattttacgtgctatgtatgcagattttgcttacgtggtggaatgagggaccaaaagtggaag 30390556  T
Q  351 aatctgaaattac 363  Q
    ||| |||||||||    
T  30390555 aatatgaaattac 30390543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 42670954 - 42671013
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||    
T  42670954 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattac 42671013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 23806330 - 23806187
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||| |||| ||||||||||||||||| | |||||||||||| |         | ||||||||| |||  || |||||||| ||||    
T  23806330 gggtaaatacctcttttt-gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcatattc 23806233  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||| ||| || || || ||||||||||| ||||||    
T  23806232 ttccacttttggtccctcattccaccacgtcagcaaaatttgcata 23806187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 17850587 - 17850729
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| |||||||||||||||||||  ||||||||||| |        |||  ||||||| ||| ||| |||||| ||||||    
T  17850587 gggtaaatacctcttttc-gtccctgtaatattagcgaattccgattttagtccctataaaaaaaagat--ttagattttgtctctgtaatttaagattc 17850683  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||| || ||| || || || ||||||| ||||||||||    
T  17850684 ttccacttttgatccctcattccaccacgtcagcagaatctgcata 17850729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 17850822 - 17850880
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  17850822 atgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattac 17850880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 15106378 - 15106302
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||||||||||||||||||| || ||| || || || ||||||||||||||||||    
T  15106378 atttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcaaaatctgcata 15106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 13284643 - 13284702
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| |||||||| || |||||| |||||||||||||||||||||  |||||||||||||    
T  13284643 tatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaattac 13284702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 19251848 - 19251705
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| |||||||||||| |        |  ||||||||| |||   | |||||||| |||    
T  19251848 agggtaaatacctcttttc-gtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaag--atttagattctgtccttgtaatttcatatt 19251752  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||| |||| ||| ||||| || ||||||| ||||||||||    
T  19251751 cttccactttcggtccctcatttcaccacgtcagcagaatctgcata 19251705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 22263426 - 22263485
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  22263426 tatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 22263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 23806095 - 23806036
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||| |||| ||||| |||||||||||||||||| ||||| |||||||    
T  23806095 tatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaattac 23806036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 23854901 - 23854960
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| | |||||||    
T  23854901 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattac 23854960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 26236270 - 26236211
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||| ||||||||| |||| ||||| ||||||||||||||| || |||||||||||||    
T  26236270 tatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaattac 26236211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 39878450 - 39878397
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  39878450 gggtaaatacctcttttt-gtcc-tgtaatattagcgaattccagttttcgtccct 39878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 26560789 - 26560847
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||||| |||| ||||| ||| |||||||||||||| ||| ||||||||    
T  26560789 tatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaatta 26560847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 17463470 - 17463415
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  | || ||||||||||||||||||| ||||||||||||    
T  17463470 agggtaaatacctcttttc-gcccctgtaatattagcgaattccggttttagtccct 17463415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 20498888 - 20498832
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaat 360  Q
    |||||||||||| ||| |||| | ||| |||||||||||||||||| ||||||||||    
T  20498888 tatgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaat 20498832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 26236474 - 26236330
Alignment:
Q  65 gagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagat 164  Q
    |||||||||||||||||||  |||| ||||||||||||||||| | ||||||||||  ||         | ||||||||| |||  || |||||||||||    
T  26236474 gagggtaaatacctcttttc-gtccctgtaatattagcgaatttcggttttagtcc--ttggaaaaaaaagatttagattttgtccctgtaatttcagat 26236378  T
Q  165 tcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||| |||||||| ||| || || || || |||| ||||||||||    
T  26236377 tcttccatttttggtccctcattccaccacgtaagcagaatctgcata 26236330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 33290192 - 33290148
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtgga 348  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||    
T  33290192 tatgcagattctgctgacgtggttaaataagggaccaaaagtgga 33290148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 13254582 - 13254633
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaat 205  Q
    ||||||||||||||| ||||||||||  |||||||||||| |||| ||||||    
T  13254582 taatttcagattctttcacttttggttcctcctttcatcacgtcaacaaaat 13254633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 17463234 - 17463175
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || |||||||||||||||||||||| | || ||||||||||    
T  17463234 tatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaattac 17463175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 26135960 - 26135901
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| |||||||||||||| ||| |||||||||||||    
T  26135960 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattac 26135901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 39878245 - 39878186
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||| | || ||||| ||| |||||||||||||| |||||||||||||    
T  39878245 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattac 39878186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 15106209 - 15106151
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||  |||| |||| ||||| |||||||||||||||||| ||||| |||||||    
T  15106209 atgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattac 15106151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 26560639 - 26560697
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||||||||||||||| ||  || || || ||||||| ||||||||||    
T  26560639 taatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 26560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 30390544 - 30390602
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||| |||||||||||||||||| ||| || || || || |||||||||||||||    
T  30390544 taatttcatattcttccacttttggtccctcattccaccacgtaagcaaaatctgcata 30390602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 34548658 - 34548712
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctg 208  Q
    |||||||| ||| |||||| |||||||||||||||||||| ||||| | ||||||    
T  34548658 taatttcatattgttccacctttggtcactcctttcatcacgtcagtagaatctg 34548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 12419087 - 12419046
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  12419087 ttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 12431147 - 12431106
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  12431147 ttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 17850965 - 17850913
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | |||||||||    
T  17850965 agggtaaatacctcttttc-gtccctgtaatattagcgaatttcggttttagtc 17850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 120
Target Start/End: Complemental strand, 21482234 - 21482205
Alignment:
Q  91 tgtaatattagcgaattccagttttagtcc 120  Q
    ||||||||||||||||||||||||||||||    
T  21482234 tgtaatattagcgaattccagttttagtcc 21482205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 22263572 - 22263520
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    ||||||||||||||||||   ||| ||||||||||||||||||| |||||||||    
T  22263572 agggtaaatacctcttttcgttcc-tgtaatattagcgaattccggttttagtc 22263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 13254729 - 13254693
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttca 190  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  13254729 taatttcagattcttccacttttggtccctcatttca 13254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 19251606 - 19251554
Alignment:
Q  311 attctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||  ||| ||||| |||||||||||||||||| ||| |||||||||    
T  19251606 attctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 19251554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 20499056 - 20498980
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || ||||||||||||||| |||||||||||  || ||||| ||  |||||| ||||||||||    
T  20499056 atttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatctgcata 20498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 22263258 - 22263334
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||  || || || ||||||| ||||||||||    
T  22263258 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 22263334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagtttt 115  Q
    |||||||||||||||||  |||| ||||||||||||||||||| |||||    
T  23855072 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 26236126 - 26236181
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||| |||||||  |||| ||||||||||||||||||  ||||||||||||    
T  26236126 agggtaaatatctcttttc-gtccttgtaatattagcgaattctggttttagtccct 26236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 9e-89; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 41600337 - 41600042
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  41600337 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcagatt 41600240  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  41600239 cttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttca 41600140  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| |||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||| |||| |||||| |||||||||||||    
T  41600139 gattcctccacttttgatccctcattttacgtgccatgtatgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattac 41600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 67 - 363
Target Start/End: Complemental strand, 20419915 - 20419620
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||| |||| |||||||||| |||||||| |||||||||||| |         | ||||||||| |||  || |||||||||||||    
T  20419915 gggtaaatacctcttttt-gtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 20419817  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    ||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||     
T  20419816 ttctacttttggtccctcctttcatcaagtcaacaaaatcttcataaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcat 20419717  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| |||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||||||||||||| ||||| ||| |||||||||    
T  20419716 attcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattac 20419620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 12006919 - 12006624
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  || | |||||||||||||||||||  ||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  12006919 agggtaaatacctcttttc-gttcatgtaatattagcgaattccgattttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcagatt 12006822  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  12006821 cttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggtcactgtaatttca 12006722  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| |||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||| ||||||||||| |||||||||||||    
T  12006721 gattcctccacttttgatccctcattttacgtgccatgtatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattac 12006624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 23704746 - 23704955
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  23704746 taatttcagattcttccacttttggtccctcctttcatcaagtcaatagaatctgcataaattacttccctgtaatttcagattcctcccacttttggtc 23704845  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||||||||| |||    
T  23704846 cctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaat 23704945  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  23704946 atgaaattac 23704955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 48672658 - 48672363
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||  ||||||||||||||||| | |||||||||||| |         | ||||||||| | |  || ||||||||||||    
T  48672658 agggtaaatacctcttttc-gtctctgtaatattagcgaatttcggttttagtccctgtaaataaaa-agatttagattttatccctgtaatttcagatt 48672561  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  48672560 cttccacttttggtccctcctttcatcacgttagcaaaatctgcatcaattacgtccttgtaatttcaaattcctcccacttttggtccttgtaatttca 48672461  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| ||||||||||||| || ||| |||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||    
T  48672460 gattcctccacttttgatccctcattttacatgccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattac 48672363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 20459002 - 20458775
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||||||| ||||||||| || ||| |||||||||||||||| |||||||||| |    
T  20459002 atttagattttgtcactgtaatttcagattcttccacttttggtccctcctttgatcaagtcaacagaatttgcataaattacgtccctgtaatttcaga 20458903  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||| |||||||||| | |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||| |||||||    
T  20458902 ttcctcccgcttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagg 20458803  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  20458802 gaccaaaagtggaagaatctgaaattac 20458775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 38880035 - 38879808
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  38880035 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcataaattacgtccctgtaatttcata 38879936  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||||||||||||| || |||||||||||| |||||  ||||||||||||||||| ||| ||| |||||||||||||||  ||||||| |||||||    
T  38879935 ttcctcccacttttggtctctataatttcagattcctccaaatttggtccctcattttatgtgccatgtatgcagattctgcttacgtggtggaatgagg 38879836  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| ||| |||||||||    
T  38879835 gaccaaaagtggaagaatatgaaattac 38879808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 20963872 - 20963579
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |         | |||||||||  ||  || ||||||||||||    
T  20963872 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaata--aaatttagatttagtccctgtaatttcagatt 20963776  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||| ||||||||||| |||||||||||| |||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||    
T  20963775 ctttcacttttggtc-ctcctttcatcacgtcaacataatttgcataaattacgtccctgtaatttcatattcctcccacttttggtccttgtaatttca 20963677  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     |||  ||||||||||||||||||||||||||| ||| |||||||||||||||   |||| | ||||||||||||||||||||| ||||| |||||||    
T  20963676 tattcttccacttttggtccctcattttacgtgccatgtatgcagattctgcttatgtggcggaatgagggaccaaaagtggaagaatctaaaattac 20963579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 28218542 - 28218263
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  28218542 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcagatt 28218445  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  28218444 cttccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttca 28218345  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||||||||||                ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  28218344 gattactccacttttggtccctc----------------atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattac 28218263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 152 - 363
Target Start/End: Complemental strand, 44817130 - 44816919
Alignment:
Q  152 tataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttgg 251  Q
    |||||||||| |||||| ||||||||||| ||| |||||||||||||  | |||||||||||||||||| | |||| ||||| |||||| ||||||||||    
T  44817130 tataatttcatattctttcacttttggtccctcttttcatcaagtcaatagaatctgcataaattacgtacatgtagtttcaaattccttccacttttgg 44817031  T
Q  252 tccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaa 351  Q
    ||| | |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||||||||| |    
T  44817030 tccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaga 44816931  T
Q  352 atctgaaattac 363  Q
    ||||||||||||    
T  44816930 atctgaaattac 44816919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 136 - 362
Target Start/End: Complemental strand, 23383811 - 23383585
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||||||| ||||||| ||||||||||||||||| || |||||||||||| |||||||||||||||| | |    
T  23383811 atttagattttgtccctgtaatttcatattcttccacctttggtccctcctttcatcaagtcaacagaatctgcataaactacgtccttgtaattttaga 23383712  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||| | |||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||  ||||||| |||||||    
T  23383711 ttcctcccacttttggtccttgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagg 23383612  T
Q  336 gaccaaaagtggaaaaatctgaaatta 362  Q
    ||| |||| ||||| ||| ||||||||    
T  23383611 gacaaaaaatggaagaatatgaaatta 23383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 31851532 - 31851323
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||||||| ||||||||||||  |||||| ||| |||||||||||||||| |||||||||| ||||||| || ||||| ||    
T  31851532 taatttcatattcttccacttttggtctctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagattcctctcaattttgatc 31851433  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||| || |||||||||||||||    
T  31851432 cctgtaatttcatatttctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaat 31851333  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  31851332 atgaaattac 31851323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 10409459 - 10409668
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||||||||||| |||||| ||| || |||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  10409459 taatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcctacttttggtc 10409558  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    | | |||||||||||| ||||||||||| ||||||||||||| || ||| |||||||||||||||  ||||||| ||||||||| ||||||||||| |||    
T  10409559 cttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaat 10409658  T
Q  354 ctgaaattac 363  Q
    || |||||||    
T  10409659 ctaaaattac 10409668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 7658262 - 7658055
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  7658262 taatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctgcataaattatgtccctgtaatttcatattcctcccacttttggt- 7658164  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| ||||||||||||  || |||||| ||||||||||||||||| |||  ||||||||| ||||| |||| ||||| || |||||||||||| || |||    
T  7658163 cctttaatttcagattcatctacttttagtccctcattttacgtgacat-gatgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaat 7658065  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  7658064 ttgaaattac 7658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 81 - 362
Target Start/End: Complemental strand, 1250571 - 1250291
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||| |||| ||||||||||||||||||||||||||||| || |         | ||||||||| |||  || |||||||| ||||||||||||||||||    
T  1250571 ttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaa-agatttagattttgtccctttaatttcatattcttccacttttggtc 1250473  T
Q  181 actcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccactttt 280  Q
     |||||||||||| ||||| | |||||||||||||||||||| |||||||||| |||||||| | |||||||| || ||||| || ||| ||||||||||    
T  1250472 cctcctttcatcacgtcagaagaatctgcataaattacgtccctgtaatttcaaattcctcctatttttggtcactgtaattccatattcctccactttt 1250373  T
Q  281 ggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
      ||| ||||||||| || ||| ||||||||||| |||| ||||||| |||||| |||||||||||||| ||||| ||||||    
T  1250372 aatccttcattttacatgacatgtatgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaatta 1250291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 67 - 292
Target Start/End: Original strand, 6465855 - 6466077
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    ||||||||| || ||||| |||| ||||||||||||||||||| |||||||||||| |         |||||||||||||||   | |||||||||||||    
T  6465855 gggtaaatatct-tttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaa--atatttagattatgttcttgtaatttcagattc 6465951  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    |||||||||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||||||||| |||||||||||||||| ||||| ||||||||     
T  6465952 ttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattatgtccctgtaatttcaaattcctcccacttttgatccctgtaatttcat 6466051  T
Q  267 attactccacttttggtccctcattt 292  Q
    ||||||||||||||||||||||||||    
T  6466052 attactccacttttggtccctcattt 6466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 172 - 363
Target Start/End: Original strand, 33162638 - 33162829
Alignment:
Q  172 cttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattac 271  Q
    |||||| || || ||||||||| ||||| | |||||| ||||||||||| |||||||||||| |||||| ||||||||||||| | ||||||||||||||    
T  33162638 cttttgatcccttctttcatcacgtcagtagaatctgtataaattacgttcttgtaatttcaaattccttccacttttggtccgtgtaatttcagattac 33162737  T
Q  272 tccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    | ||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||  ||| |||||||||| ||| |||||||||    
T  33162738 ttcacttttggtccctcattttatgtgccatgtatgcagattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattac 33162829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 25772710 - 25772522
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||| |||||||  |||| | ||||||||| |||||||||||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  25772710 agggtaaatatctcttttc-gtccctataatattagtgaattccagttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcagatt 25772613  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctc 257  Q
    |||| |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  25772612 cttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcct-ccacttttggtccctc 25772522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 24194941 - 24195090
Alignment:
Q  219 gtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccc-----tcattttacgtgtcatatatgcagatt 313  Q
    |||| |||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||||||||     ||||||||||| |||| ||||||||||    
T  24194941 gtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccacttttggtccctcatttcattttacgtatcatgtatgcagatt 24195040  T
Q  314 ctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||  |||| || ||||||||||||||||||||| ||| |||||||||    
T  24195041 ctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattac 24195090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 25772552 - 25772447
Alignment:
Q  258 taatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctga 357  Q
    |||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||||||| ||||||||||| ||| |||    
T  25772552 taatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatga 25772453  T
Q  358 aattac 363  Q
    ||||||    
T  25772452 aattac 25772447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 363
Target Start/End: Complemental strand, 48648457 - 48648345
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaa 350  Q
    |||||| |||||||||||| ||||| |||||||||||| ||||||||| ||| |||||||||||| ||  ||||||| ||||||||||||||| || |||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctccttttacgtgccatgtatgcagattctacttacgtggtggaatgagggaccaaaaatgaaaa 48648358  T
Q  351 aatctgaaattac 363  Q
    |||||||||||||    
T  48648357 aatctgaaattac 48648345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 48648540 - 48648420
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| ||| | | |||||| |||||||||||||| ||||| |||||||||||| |||| || |||||||||||||||||||| |||||||||| |    
T  48648540 atttagattttgtctatgtaattttagattcttccacttctggtccctcctttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcaga 48648441  T
Q  236 ttcctcccacttttggtccctc 257  Q
    ||||| ||| ||||||||||||    
T  48648440 ttcct-ccaattttggtccctc 48648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 28218177 - 28218321
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  28218177 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagatt 28218275  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcat 211  Q
    ||||||||||||||| ||| || || || ||||||| |||||||||    
T  28218276 cttccacttttggtccctcattccaccacgtcagcagaatctgcat 28218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 16995341 - 16995283
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||    
T  16995341 atgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattac 16995283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 6465997 - 6465938
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  6465997 tatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 6465938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 7658038 - 7658113
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcat 211  Q
    |||||||||||||   | |||||||| |||||| |||||||||||  ||||||||||| |||||||||||||||||    
T  7658038 atttagattatgtccatgtaatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatctgcat 7658113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 38879959 - 38880018
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | |||||||| |||||||||||||||||| |||||||||||||    
T  38879959 tatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattac 38880018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 12006776 - 12006834
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  12006776 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 12006834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 41600194 - 41600252
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  41600194 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 41600252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 38879723 - 38879867
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| |||||||||||||||||||| ||||||| ||| |         | ||||||||| |||  || |||||||| ||||    
T  38879723 gggtaaatacctcttttc-gtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 38879821  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||| ||| || || || || |||| ||||||||||    
T  38879822 ttccacttttggtccctcattccaccacgtaagcagaatctgcata 38879867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 16995264 - 16995347
Alignment:
Q  134 atatttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaatta 217  Q
    ||||||||||| |||  || ||||||||||||||||||||||||||| | | || || || ||||||| ||||||||| |||||    
T  16995264 atatttagattttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatctgcatcaatta 16995347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 23705039 - 23704896
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||  ||||||||||||||||||| |||||||||||| |        |  ||||||||| |||  || |||||||| |||    
T  23705039 agggtaaatacctcttttc-gtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaag--atttagattttgtccctgtaatttcatatt 23704943  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| || || || || |||| ||||||||||    
T  23704942 cttccacttttggtccctcattccaccacgtaagcagaatctgcata 23704896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 1250441 - 1250499
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||| ||| ||||||||    
T  1250441 tatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatta 1250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 20458691 - 20458834
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||| | ||||| |||| |||||||||| |||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  20458691 agggtaaatacat-tttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaa--aaatttagattttgtcgctgtaatttcagatt 20458787  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| || || || || |||| ||||||||||    
T  20458788 cttccacttttggtccctcattccaccacgtaagcagaatctgcata 20458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 28218399 - 28218457
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| || || |||| ||||| |||||||||||||||||| |||||||||||||    
T  28218399 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 28218457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 48672515 - 48672573
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||  |||| ||||| |||||||||||||||||| |||||||||||||    
T  48672515 atgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 48672573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 12006540 - 12006595
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| |||||||||||||||||||  |||||||||||    
T  12006540 agggtaaatacctcttttc-gtccctgtaatattagcgaattccgattttagtccct 12006595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 48672346 - 48672422
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||  || ||| |||||||||||||||||||||||| || ||| || || || ||||||| ||||||||||    
T  48672346 atttagatttcgtctctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcata 48672422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 7658204 - 7658263
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||| |||| ||||| ||| |||||||||||||| ||||| |||||||    
T  7658204 tatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaattac 7658263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 10409752 - 10409609
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||   ||| |||||||||||||||||||  ||||||||||| |        |||  ||||||| ||| ||| |||||| |||||    
T  10409752 agggtaaatacctcttttca-tccatgtaatattagcgaattccgattttagtccctgtaaaaaaaagat--ttagattttgtctctgtaattttagatt 10409656  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||| || ||| || || || || |||| ||||||||||    
T  10409655 cttccacttttgatccctcattccaccacgttagcagaatctgcata 10409609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 20419536 - 20419590
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||||||||||  |||| | ||||||||||||||||| ||||||||||||    
T  20419536 gggtaaatacctcttttc-gtccctataatattagcgaattccggttttagtccct 20419590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 23704804 - 23704745
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||  || | || ||||| |||||||||||||||||| |||||||||||||    
T  23704804 tatgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaattac 23704745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 25772566 - 25772625
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| |||||||||||||| ||| |||||||||||||    
T  25772566 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattac 25772625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 48648464 - 48648523
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || |||| ||||| ||||||||| |||||||| ||||| |||||||    
T  48648464 tatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattac 48648523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 24195089 - 24195031
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||| |||||||||||||||||| ||| || ||||| || |||| ||||||||||    
T  24195089 taatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctgcata 24195031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 44816920 - 44816978
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||||||||||||||| ||| || || || || |||| ||||||||||    
T  44816920 taatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcata 44816978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 14795549 - 14795601
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    ||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||    
T  14795549 agggttaatacc-ctttttagtccttgtaatatgagcgaattccagttttagtc 14795601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 15242541 - 15242593
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    ||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||    
T  15242541 agggttaatacc-ctttttagtccttgtaatatgagcgaattccagttttagtc 15242593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 23704662 - 23704710
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagtttta 116  Q
    |||||||||||||||||  |||| ||||||||||||||||||| ||||||    
T  23704662 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggtttta 23704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 14647029 - 14646974
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||| |||||| |||||| |||| |||||||| |||||||||| ||||||||||||    
T  14647029 agggttaatacc-ctttttagtccctgtaatatgagcgaattccggttttagtccct 14646974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 24194977 - 24195017
Alignment:
Q  151 ctataatttcagattcttccacttttggtcactcctttcat 191  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  24194977 ctataatttcagattcctccacttttggtccctcatttcat 24195017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 24195016 - 24194980
Alignment:
Q  326 tgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||||||||||||  ||||||||||||    
T  24195016 tgaaatgagggaccaaaagtggaggaatctgaaatta 24194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 28218257 - 28218297
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  28218257 gtccctgtaatttcagattcttccacttttggtccctcatt 28218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 38880099 - 38880048
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    |||||||||||||||||  |||| |||||||||||| |||||| |||||||||    
T  38880099 gggtaaatacctcttttc-gtccctgtaatattagcaaattccggttttagtc 38880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 44816832 - 44816884
Alignment:
Q  68 ggtaaatacctctttttt-gtccgtgtaatattagcgaattccagttttagtc 119  Q
    |||||||||||||||| | |||| ||||||||||||||||| | |||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtc 44816884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 44816913 - 44816953
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  44816913 gtccctgtaatttcagattcttccacttttggtccctcatt 44816953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 6e-87; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 24467628 - 24467921
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||| ||||||  |||| |||||||||||||||||||| ||||||||||| |        |||  ||||||| |||  || ||||||||||||    
T  24467628 agggtaaatacatcttttc-gtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagat--ttagattttgtccctgtaatttcagatt 24467724  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24467725 cttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcccacttttggtccctgtaatttca 24467824  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||| |||||| |||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  24467825 gattactccacatttggt-cctcattttacgtgccatgtatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattac 24467921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 18462285 - 18462578
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |        |||  ||||||| |||  || ||||||||||||    
T  18462285 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagat--ttagattttgtccctgtaatttcagatt 18462381  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||| |||||||| |||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18462382 cttccatttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcccacttttggtccctataatttca 18462481  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     |||||||||| |||||| ||||||||| |||| ||| ||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||    
T  18462482 tattactccacgtttggt-cctcattttgcgtgccatgtatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattac 18462578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 52058319 - 52058095
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    |||||||||||||  || ||||||||||||||||||||||||||| |||||||||||| |||||   |||||||||||||||||||| | | |||||| |    
T  52058319 atttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcag---aatctgcataaattacgtccctatgatttcaga 52058223  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  52058222 ttcctcccacttttggtccttgtaatttcatattactccacttttggtccctcattttacgtgtcatgtatgcagattctgctgatgtggtgaaatgagg 52058123  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  52058122 gaccaaaagtggaagaatctgaaattac 52058095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 39711157 - 39711366
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39711157 taatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcataaattacgtccttgtaatttcatattcctcccgcttttggtc 39711256  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| ||||||| |||| |||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||| ||||||||||||||||||||| |||    
T  39711257 cctgtaatttcggattcctccacttttggtccctcattttacgtgccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaat 39711356  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  39711357 atgaaattac 39711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 91 - 363
Target Start/End: Complemental strand, 4907317 - 4907046
Alignment:
Q  91 tgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtcactcctttca 190  Q
    |||||||||||||||||||||||||||||||| |         | ||||||||| |||  || ||||||||||||||||||||||||||| |||||||||    
T  4907317 tgtaatattagcgaattccagttttagtccctgtaaaataaa-agatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 4907219  T
Q  191 tcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcat 290  Q
    ||| ||||| | |||||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||  ||||||||| |||||||||    
T  4907218 tcacgtcagtagaatctgcataaattacgtccctgtaatttcagattcctcctacttttggtccctgtaatttcagattcatccacttttagtccctcat 4907119  T
Q  291 tttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| || ||| ||||||||||| |||| ||||||| ||||||||||||||||||||| ||| |||||||||    
T  4907118 tttacatgccatgtatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 4907046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 17606375 - 17606602
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||| |||||||| ||||||| |||||| ||||||||||||| ||||||||||||    
T  17606375 atttagattttgttcctgtaatttcatattcttccacttttggtccctcatttcatcacgtcagcagaatctgtataaattacgtccctgtaatttcata 17606474  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||| ||||||| ||| |||    
T  17606475 ttcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcaaattttgctgacgtggtggaataagg 17606574  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  17606575 gaccaaaagtggaagaatctgaaattac 17606602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 67 - 363
Target Start/End: Complemental strand, 39826424 - 39826134
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| ||||||||||||||||| | |||||||||||| |         | ||||||||| |||  || |||||||||||||    
T  39826424 gggtaaatacctcttttc-gtccatgtaatattagcgaatttcggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcagattc 39826327  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    ||||||||||||||    ||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||| ||||||||     
T  39826326 ttccacttttggtc----ctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaattttagattcctcccacttttgatccctgtaatttcat 39826231  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||||||||||| |||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||| ||||||||||| |||||||||||||    
T  39826230 attcctccacttttgatccctcattttacgtgccatgtatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattac 39826134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 33629069 - 33628774
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||| |         | |||| |||| |||  || ||||||||||||    
T  33629069 agggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaattt-gattttgtccctgtaatttcagatt 33628972  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| ||||||| |||| ||||||| ||||| ||||||||| |||| |||||||||| ||||||||| |||||||||||| ||||||||    
T  33628971 cttccacttttggtccctcctttaatcacgtcagcagaatctacataaattatgtccctgtaatttcaaattcctcccgcttttggtccctgtaatttca 33628872  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||| |||||||||||||||||||||||| ||| |||||| ||||||||   |||||| |||||||||||||||||| || |||||||||||||    
T  33628871 gattcctctacttttggtccctcattttacgtgccatgtatgcaaattctgcttatgtggtggaatgagggaccaaaagtgaaagaatctgaaattac 33628774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 154 - 362
Target Start/End: Original strand, 13229817 - 13230024
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||| ||||||||||     
T  13229817 taatttcatattcttccacttttgatcactcctttcatcaagtcaacataatctgcataaattacgtccctgtaatttcagattcctctcacttttggt- 13229915  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||| ||     
T  13229916 cctgtaatttcagattcctccacttttggtccctcattttgcgtgtcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaag 13230015  T
Q  354 ctgaaatta 362  Q
     ||||||||    
T  13230016 atgaaatta 13230024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 48072028 - 48072255
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| ||| ||||||||||| || ||||||||||||  |||||| ||| |||||||||||||||| |||||||||| |    
T  48072028 atttagattttgtccctgtaatttcatattattccacttttgctccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaa 48072127  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  48072128 ttcctcccacttttgatccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgtatgcagattctgctgacgtggtgaaatgagg 48072227  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
      |||||||||||| ||| |||||||||    
T  48072228 acccaaaagtggaagaatatgaaattac 48072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 151 - 363
Target Start/End: Complemental strand, 42510310 - 42510098
Alignment:
Q  151 ctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttg 250  Q
    |||||||||||||||||||||||| |  || ||| |||||||| ||||||| ||||||||||||||||  || |||||||||| ||||||||||||||||    
T  42510310 ctataatttcagattcttccacttgtattccctcatttcatcacgtcagcagaatctgcataaattacacccctgtaatttcagattcctcccacttttg 42510211  T
Q  251 gtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaa 350  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||  ||||||||||||||||| ||||||||||     
T  42510210 gtccctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgtatgcagattctgctgatgtggtgaaatgagggactaaaagtggaag 42510111  T
Q  351 aatctgaaattac 363  Q
    ||| |||||||||    
T  42510110 aatatgaaattac 42510098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 30299298 - 30299525
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| |||||||||| |    
T  30299298 atttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcaagtcaacagaatctccataaattacgtccctgtaatttcaga 30299397  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||||||||| || | | |||||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||| ||  ||||||| |||||||    
T  30299398 ttcctcccacttttagttcttgtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgcagattcttcttacgtggtggaatgagg 30299497  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| ||||| |||||||    
T  30299498 gaccaaaagtggaagaatctaaaattac 30299525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 43539414 - 43539641
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||| | ||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||| | |    
T  43539414 atttagattttgtccctgtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttaga 43539513  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||| ||| |||    
T  43539514 ttcctcccacttttgctccctgtaatttcaaattcctccacttttggtacctcattttacgtgtcatgtatgcagattcggctgacgtggtggaataagg 43539613  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||| ||||| ||| |||||||||    
T  43539614 gaccaaaactggaagaatttgaaattac 43539641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 20995754 - 20995962
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||| | |||||| ||||||||||| || ||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  20995754 taattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttcgtc 20995853  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| ||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| |||    
T  20995854 cctgtaatttcaaatttctccacttttggtccctca-tttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaat 20995952  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  20995953 atgaaattac 20995962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 67 - 363
Target Start/End: Complemental strand, 39971024 - 39970730
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| |||||||||| |||||| | |||||||||||| |         | ||||||||| |||  || |||||| |||| |    
T  39971024 gggtaaatacctcttttc-gtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcc 39970926  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    |||||||||||||| || ||||||||| ||||||| |||| |||||||||  |||| || ||||| | |||||||||||||||||||  | |||||||||    
T  39970925 ttccacttttggtcccttctttcatcacgtcagcagaatccgcataaattgtgtccctgaaattttagattcctcccacttttggtca-tgtaatttcag 39970827  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||  ||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  39970826 attcatccacttttggtccctcattttacgtgccatgtatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattac 39970730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 29696564 - 29696852
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | ||||||||| || |        |||  ||||||| |||  |  |||||||| |||    
T  29696564 agggtaaatacctcttttc-gtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaagat--ttagattttgtccccgtaatttcatatt 29696660  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||| ||||||||||||||||  || ||| ||||||||||||||| |||| | |||||||||||||||||||| |||||||||| || |||||    
T  29696661 cttccactttttgtcactcctttcatcacatcggcagaatctgcataaattatgtccctataatttcatattcctcccac-tttggtccctgtattttca 29696759  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||||||||||||||||||||      ||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||    
T  29696760 gattcctccacttttggtccctcattttacgtg-----catgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattac 29696852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 363
Target Start/End: Original strand, 8292890 - 8293101
Alignment:
Q  155 aatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtcc 254  Q
    ||||||| |||||||||||||||||  ||| |||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8292890 aatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctacttttggtcc 8292989  T
Q  255 ctctaatttcagattactccactt---ttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaa 351  Q
     | |||||| ||||| ||||||||   || |||||||||||| | || ||| ||||||||||| |||| | ||||| ||||||||||||||||||||| |    
T  8292990 atgtaattttagattcctccactttaattagtccctcatttttcatgccatgtatgcagattcggctgacatggtggaatgagggaccaaaagtggaaga 8293089  T
Q  352 atctgaaattac 363  Q
    || |||||||||    
T  8293090 atatgaaattac 8293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 198 - 363
Target Start/End: Complemental strand, 7474037 - 7473876
Alignment:
Q  198 agcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgt 297  Q
    ||||||||||||||||||||  ||| |  |||||||   |||||||||||||||||| | |||||||||||| ||||||||||| ||| |||||| ||||    
T  7474037 agcaaaatctgcataaattatatccct--aatttcag--tcctcccacttttggtccttgtaatttcagattcctccacttttgatccatcatttcacgt 7473942  T
Q  298 gtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    | ||| ||||||||||||  || ||||||||||||||||||||||||||||| ||| |||||||||    
T  7473941 gccatgtatgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattac 7473876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 34749332 - 34749221
Alignment:
Q  252 tccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaa 351  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| || ||| |||||| ||||||||  ||||||| ||||||||||||||||||||| |    
T  34749332 tccctgtaatttcagattcctccacttttggtccctcattttacatgccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaaga 34749233  T
Q  352 atctgaaattac 363  Q
    || |||||||||    
T  34749232 atatgaaattac 34749221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 34749398 - 34749296
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||||||| |||||||||||||||| ||| |||||||||| |||||| ||||||||||||    
T  34749398 taatttcagattcttccacttttggtacctcctttaatcacgtcagcagaatctgcataaattacatccctgtaatttcagattcct-ccacttttggtc 34749300  T
Q  254 cctc 257  Q
    ||||    
T  34749299 cctc 34749296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 215159 - 215044
Alignment:
Q  200 caaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgt 299  Q
    |||||| || |||||||||||| ||||||||||| ||| ||| |||||| ||||| | |||||| ||||| ||||||||||||||  |||||| ||||||    
T  215159 caaaatttgtataaattacgtcattgtaatttcagatttctctcactttcggtccgtgtaatttaagattcctccacttttggtcattcatttcacgtgt 215060  T
Q  300 catatatgcagattct 315  Q
    ||||||||||||||||    
T  215059 catatatgcagattct 215044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 39970713 - 39970789
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| ||| | | ||||||||||||||||||||||||||| ||| || || || ||||||||||||||||||    
T  39970713 atttagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatctgcata 39970789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 4907197 - 4907256
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  4907197 tatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 4907256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 16294240 - 16294137
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||| ||||||||||||| ||  ||| | || ||||||| ||||| |||||||||||||| ||||||||   |||||  ||||||||||||    
T  16294240 taatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacataaattacgtccctgtaatttatgattccatccacttttggtc 16294141  T
Q  254 cctc 257  Q
    ||||    
T  16294140 cctc 16294137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 17606447 - 17606392
Alignment:
Q  308 cagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||    
T  17606447 cagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattac 17606392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 30780356 - 30780270
Alignment:
Q  155 aatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctc 241  Q
    ||||||| |||| |||||||||| ||  || ||  |||| ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  30780356 aatttcatattcctccacttttgatccttcattcaatcacgtcagcagaatctgtataaattacgtcattgtaatttcatattcctc 30780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 24467938 - 24467862
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||| ||||| || ||||| | ||||||||||    
T  24467938 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatctgcata 24467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 52058078 - 52058154
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||| |||||  || ||||||||||||||||||||||||||| ||| ||||| ||  |||||| ||||||||||    
T  52058078 atttagactatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatctgcata 52058154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 20996046 - 20995903
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||| |||| |||||||||||||||||  ||||||||||| | |        |||  ||||||| ||| ||| |||||||| |||    
T  20996046 agggttaatacctcttttt-gtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagat--ttagattttgtctctgtaatttcatatt 20995950  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||  || || || ||||||| ||||||||||    
T  20995949 cttccacttttggtcccttattccaccacgtcagcagaatctgcata 20995903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 33628925 - 33628984
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| |||| | ||| |||||||||||||||||| |||||||||||||    
T  33628925 tatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattac 33628984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 34749340 - 34749399
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| | ||| |||| ||||||||||||| |||||||||||||    
T  34749340 tatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaattac 34749399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 39711215 - 39711156
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||| ||| |||||||||    
T  39711215 tatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaattac 39711156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 43539490 - 43539431
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| | |||||||    
T  43539490 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattac 43539431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 8293187 - 8293042
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| | |||||||| ||||||| ||||||||||||| |         | ||||||||| |||  || |||||||| |||    
T  8293187 agggtaaatacctcttttc-gtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 8293089  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| || || || ||||||  ||||||||||    
T  8293088 cttccacttttggtccctcattccaccatgtcagccgaatctgcata 8293042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 17606685 - 17606543
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||   | ||||||||||||    
T  17606685 agggttaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaa---agatttagattttgtccttgtaatttcagatt 17606590  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||  || || || ||||||||||| ||||||    
T  17606589 cttccacttttggtcccttattccaccacgtcagcaaaatttgcata 17606543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 18462577 - 18462519
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||||||||||||||| ||| ||||| || |||| || ||||||||||    
T  18462577 taatttcagattcttccacttttggtctctcatttcaccacgtcaacagaatctgcata 18462519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 42510249 - 42510307
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||||| |||| ||||||||||||  | |||||||| ||||||||||||    
T  42510249 tatgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctgaaatta 42510307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 48072274 - 48072196
Alignment:
Q  134 atatttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||||  || |||||||| ||||||||||||||||   ||| ||||| || ||||||| ||||||||||    
T  48072274 atatttagattatgtccctgtaatttcatattcttccacttttgggtcctcatttcaccacgtcagcagaatctgcata 48072196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 7473862 - 7473935
Alignment:
Q  139 tagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||| ||| |||||||| |||||||||||||||||| ||| ||||| || ||||  | ||||||||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcata 7473935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 8292947 - 8292890
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatt 361  Q
    |||||||||||||||| |||| ||||| |||| ||||||||||||| ||| |||||||    
T  8292947 tatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatt 8292890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 4906961 - 4907016
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| ||||||||||| |||||| |||||||||||||    
T  4906961 agggtaaatacctcttttc-gtccctgtaatattagtgaattctagttttagtccct 4907016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 39711451 - 39711396
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| ||||||||||||||||||  ||||||||||||    
T  39711451 agggtaaatacctcttttc-gtccctgtaatattagcgaattctggttttagtccct 39711396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 18342395 - 18342341
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||||| ||||| |||| ||||||||||||||||| | ||||||||||||    
T  18342395 gggtaaatacct-tttttcgtccctgtaatattagcgaatttcggttttagtccct 18342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 24467771 - 24467712
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||  || | || ||||| |||||||||||||||||| |||||||||||||    
T  24467771 tatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaattac 24467712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 30252285 - 30252222
Alignment:
Q  60 aaatagagggtaaatacctctttt-ttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||| |||||||||||||||||  |||||| | ||||||||||||||||  ||||||||||||    
T  30252285 aaatatagggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccct 30252222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 33628689 - 33628743
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccc 121  Q
    ||||||||||||||||||  |||| ||||||||||||||||||  |||||||||||    
T  33628689 agggtaaatacctcttttc-gtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 42510166 - 42510204
Alignment:
Q  325 gtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  42510166 gtgaaatgagggaccaaaagtggaggaatctgaaattac 42510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 52058260 - 52058302
Alignment:
Q  321 cgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||| |||||||||||||||||| |||||||||||||    
T  52058260 cgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 52058302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 16294247 - 16294211
Alignment:
Q  219 gtccttgtaatttcatattcctcccacttttggtccct 256  Q
    |||||||||||||||||||||| |||||||||||||||    
T  16294247 gtccttgtaatttcatattcct-ccacttttggtccct 16294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 17502094 - 17502053
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  17502094 ttttggtccttgtaatattagcgaattccggttttagtccct 17502053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 24467927 - 24467886
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattt 292  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  24467927 gtccctgtaatttcagattcttccacttttggtccctcattt 24467886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 29696851 - 29696794
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcat 211  Q
    ||||||||||||||||||||||||||| ||| || || || || |||| |||||||||    
T  29696851 taatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcat 29696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 52058089 - 52058130
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattt 292  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  52058089 gtccctgtaatttcagattcttccacttttggtccctcattt 52058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 4907029 - 4907105
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||| || || || ||||||  ||||||||||    
T  4907029 atttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagccgaatctgcata 4907105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 17606307 - 17606358
Alignment:
Q  70 taaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||  |||| |||||||||||||||||||  |||||||||||    
T  17606307 taaatacctcttttc-gtccctgtaatattagcgaattccgattttagtccct 17606358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 20995697 - 20995752
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||   ||  ||||||||||||||||||| ||||||||||||    
T  20995697 agggtaaatacctcttttca-tctctgtaatattagcgaattccggttttagtccct 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 39826117 - 39826193
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||||||||||||||||||| || ||| || || || || |||| ||||||||||    
T  39826117 atttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcata 39826193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 42510081 - 42510157
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||| ||| ||| ||||| ||  |||||| ||||||||||    
T  42510081 atttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatctgcata 42510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 5e-84; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 10108369 - 10108664
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || |||||||| |||    
T  10108369 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcatatt 10108466  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  10108467 cttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcgtcccacttttggtccctgtaatttca 10108566  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  10108567 aattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattac 10108664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 138 - 363
Target Start/End: Complemental strand, 42113293 - 42113068
Alignment:
Q  138 ttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatatt 237  Q
    |||||||||||  || |||||||| ||||||||||||||| || |||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  42113293 ttagattatgtccctttaatttcaaattcttccacttttgatccctcctttcatcatgtcagcaaattctgcataaattatgtccctgtaatttcatatt 42113194  T
Q  238 cctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgaggga 337  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  42113193 cctcccacttttggtccctataatttcatattactccacttttggtccctcattttatgtgtcatgtatgcagattctgctgacgtggtgaaatgaggga 42113094  T
Q  338 ccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| || ||||| |||||||    
T  42113093 ccaaaagtgaaagaatcttaaattac 42113068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 17623180 - 17622971
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  17623180 taatttcaaattcttccacttttggtcactcctttcatcacgtcagcagaatctgcataaattatgtccctgtaatttcaaattcctcccacttttggtc 17623081  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| ||| || ||||||||||||| ||||||| ||||||||||||||||||||| |||    
T  17623080 cctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtacgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaat 17622981  T
Q  354 ctgaaattac 363  Q
    || |||||||    
T  17622980 ctaaaattac 17622971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 21148229 - 21148021
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21148229 taatttcatattcttccacttttagtccctcctttcatcatgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtc 21148130  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    | | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||    
T  21148129 c-tataatttcaaattcctccacttttggtccctcattttacgtgtcatatatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaat 21148031  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  21148030 ctgaaattac 21148021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 7689608 - 7689817
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||||||||||||||| ||| ||||||||  || ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||    
T  7689608 taatttcagattcttccacttttggtccctcttttcatcacatcggcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttagtc 7689707  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||| |||    
T  7689708 cctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaat 7689807  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  7689808 ctgaaattac 7689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 30789886 - 30789591
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| |||||||||||  |||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  30789886 agggtaaatacctcttttc-gtccctgtaatattagtaaattccggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcagatt 30789789  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||||||||||||  || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30789788 cttccacttttggtccatcgtttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcatattcctcccacttttggtccttgtaatttca 30789689  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| |||||||| ||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||||||  |||||||||||||    
T  30789688 gattcctccacttttgatccctcatcttacgtgccatgtatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattac 30789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 161 - 363
Target Start/End: Complemental strand, 43851950 - 43851748
Alignment:
Q  161 agattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaa 260  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||    
T  43851950 agattcttccactttttgtccctcctttcatcacgtcagcaaaatttgcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaa 43851851  T
Q  261 tttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaat 360  Q
    ||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||  |||||| ||||||||| ||||||||||| ||||||||||    
T  43851850 tttcatattcctccacttttgatccctcattttacgtgtcatgtatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaat 43851751  T
Q  361 tac 363  Q
    |||    
T  43851750 tac 43851748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 14767800 - 14767591
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| ||||||||| |||  ||| ||| |||||||| |||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14767800 taatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtc 14767701  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  14767700 cctgtaatttcaaattcctccacttttggtctctcattttacgtgtcatatatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaat 14767601  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  14767600 ctgaaattac 14767591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 26136684 - 26136979
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||   ||| |||||||||||||||||||||||||||||||| |         | ||||||||| |||   | ||||||||||||    
T  26136684 agggtgaatacctcttttcgttcc-tgtaatattagcgaattccagttttagtccctgtaaaaaaaaaa-atttagattttgtccttgtaatttcagatt 26136781  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||| ||||| |  |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||||||| | || |||||    
T  26136782 cttccaattttgattcctcctttcatcaagtcagcataatctgcataaattacgtccctgtaatttcagatttctcccacttttggtccttgtactttca 26136881  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||| |||||||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||    
T  26136882 gattcctccatttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattac 26136979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 5554868 - 5555163
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||| ||||| |||  ||||||||||| |||    
T  5554868 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agattcagattttgtccctataatttcatatt 5554965  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||| || ||||||| |||||||| | ||||||||||| |||||||     
T  5554966 cttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctggaatttcagattcctcctagttttggtccctgtaatttcg 5555065  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| || ||||||||||||||||||||||||| ||| |||||||||| ||||| | ||||| ||| ||||||||||||||||| ||| |||||||||    
T  5555066 aattccttcacttttggtccctcattttacgtgccatttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattac 5555163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 136 - 362
Target Start/End: Original strand, 2583387 - 2583613
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||||| |||||||| ||||||| || |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |    
T  2583387 atttagattttgtccctgtaatttcggattcttctacttttgatccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 2583486  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||| ||||||||||||| |||||||| ||| |||||||||| |||||||||||||| || ||| ||||||||||| ||||  |||||| |||||||    
T  2583487 ttcctcctacttttggtccctgtaatttcaaattcctccacttttagtccctcattttacatgccatgtatgcagattcggctgatgtggtggaatgagg 2583586  T
Q  336 gaccaaaagtggaaaaatctgaaatta 362  Q
     ||||||||||||| ||||||||||||    
T  2583587 aaccaaaagtggaagaatctgaaatta 2583613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 67 - 363
Target Start/End: Original strand, 14820295 - 14820588
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| ||||||||||||||||||| |||||||| ||| |        |||  ||||||| |||  || |||||||| ||||    
T  14820295 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagat--ttagattttgtccctgtaatttcatattc 14820391  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    |||||||||||||| ||||||||||||  |||||| |||||||||||||||||||| |||||||||| ||| |||| | ||||| ||||  |||| |||     
T  14820392 ttccacttttggtccctcctttcatcacatcagcagaatctgcataaattacgtccctgtaatttcagatttctcctagttttgctccccgtaatctcaa 14820491  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  14820492 attcctctacttttggtccctcattttacgagtcatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattac 14820588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 22494470 - 22494678
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| ||||||||| |||||||| || |||| |||| ||||||| |||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  22494470 taatttcatattcttccatttttggtc-cttctttaatcacgtcagcagaatctgcataaattacgtccctgtaattttagattcctcctacttttggtc 22494568  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||  |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||| ||||||||||||||||||||| |||    
T  22494569 ccagtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaat 22494668  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  22494669 ttgaaattac 22494678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 42605838 - 42606047
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||||||| ||||||| |||| ||||| | ||| |||||||||||||||| |||||||||| ||||||||| |||||||||    
T  42605838 taatttcatattcttccacttttggtccctcctttaatcacgtcagtagaatatgcataaattacgtccctgtaatttcaaattcctcccgcttttggtc 42605937  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
     || |||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||  ||||||| ||| | ||||||||||||||| |||    
T  42605938 gctgtaatttcagattcctccacttttggtccctcattttacgtgccatgaatgcaaattctgcttacgtggtggaataatggaccaaaagtggaagaat 42606037  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  42606038 ttgaaattac 42606047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 26533020 - 26532867
Alignment:
Q  210 ataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgca 309  Q
    ||||||||| |||||||||||||| | ||||| |||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  26533020 ataaattacatccttgtaatttcaaactcctcacacttttggttcctataatttcagattcctccacttttaatccctcattttacgtgtcatgtatgca 26532921  T
Q  310 gattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||    
T  26532920 gattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattac 26532867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 154 - 355
Target Start/End: Complemental strand, 43481607 - 43481406
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| ||||||||||| ||||||  |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||  || ||||||    
T  43481607 taatttcaaattcttccactcttggtctttcctttaatcacgtcagcacaatctgcataaattacgtccttgtaatttcagattcctcctgctcttggtc 43481508  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
      | |||||| ||||| ||||||||||| |||||| ||||||||| ||| |||||| ||||| || |||||||| |||||| |||||||||||||| |||    
T  43481507 tttgtaattttagattcctccacttttgatccctcgttttacgtgccatgtatgcaaattctacttgcgtggtggaatgagagaccaaaagtggaagaat 43481408  T
Q  354 ct 355  Q
    ||    
T  43481407 ct 43481406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 21147935 - 21148080
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  21147935 agggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagatt 21148033  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||  || || || ||||||| ||||||||||    
T  21148034 cttccacttttggtcccttattccaccacgtcagcagaatctgcata 21148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 363
Target Start/End: Complemental strand, 22848540 - 22848402
Alignment:
Q  225 gtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtg 324  Q
    |||||||||||||| |  ||||||||||| || |||||||| ||| ||||| ||||  ||| |||||| ||||| ||| ||||||||||||  || ||||    
T  22848540 gtaatttcatattcttttcacttttggtctctgtaatttcaaattcctccattttttatcc-tcatttcacgtgccatttatgcagattcttttgacgtg 22848442  T
Q  325 g-tgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    | ||||| |||||||||||| || || |||||||||||||    
T  22848441 ggtgaaacgagggaccaaaaatgaaagaatctgaaattac 22848402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 10108513 - 10108454
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  10108513 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 10108454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 17622889 - 17623027
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||| |         | ||||||||| ||| ||| |||||| |||||    
T  17622889 agggtaaatacctcttttc-gtccttgtaatattagcgaatttcagttttagtccctgtaaaaaa---agatttagattttgt-tctgtaattttagatt 17622983  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgc 209  Q
    ||||||||||||||| ||| || || || ||||||| |||||||    
T  17622984 cttccacttttggtccctcattccaccacgtcagcagaatctgc 17623027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 43851665 - 43851807
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |        |  ||||||||| |||  || |||||||||||||    
T  43851665 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaacaaaag--atttagattttgtccctgtaatttcagattc 43851761  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||| || ||| || || ||  |||||| ||||||||||    
T  43851762 ttccacttttgatccctcattccaccacatcagcagaatctgcata 43851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 30789574 - 30789650
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| ||| ||| ||||||||||||| |||||||||| || ||| ||||| || || |||||||||||||||    
T  30789574 atttagattttgtctctgtaatttcagattcctccacttttgatccctcatttcaccacgttagcaaaatctgcata 30789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 42113051 - 42113127
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||  || |||||| |||||||| ||||||||||| ||| ||||| || ||||||| ||||||||||    
T  42113051 atttagattatgtccctgtaatttaagattctttcacttttggtccctcatttcaccacgtcagcagaatctgcata 42113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 5555180 - 5555101
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaat 215  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||  || || || |||||||||||||||||||||    
T  5555180 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtcagcaaaatctgcataaat 5555101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 14820437 - 14820378
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||||  ||| ||||| |||||||||||||||||| ||| |||||||||    
T  14820437 tatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 14820378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 14820678 - 14820529
Alignment:
Q  61 aatagagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttc 160  Q
    |||| ||||| ||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || |||||||    
T  14820678 aataaagggttaatacctctttta-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttc 14820581  T
Q  161 agattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    | |||||||||||||||||| ||  || || || ||||||| ||||||||||    
T  14820580 atattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 14820529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 17623122 - 17623181
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| ||| |||||||||||||| ||| |||||||||    
T  17623122 tatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaattac 17623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 5555012 - 5554954
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||| ||| ||||||||    
T  5555012 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaatta 5554954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 30789743 - 30789801
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| || ||||||||||||||| |||||||||||||    
T  30789743 atgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattac 30789801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 42606141 - 42606080
Alignment:
Q  57 gaaaaatagagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    |||||||| |||||||||| |||||||| |||| ||||||||||||||||||  |||||||||    
T  42606141 gaaaaatatagggtaaatatctcttttt-gtccctgtaatattagcgaattctggttttagtc 42606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 10171522 - 10171383
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||||| |||||  |||| ||||||||||||||||||| |||||||||||| |          |||||||||| |||  || |||||| |||||    
T  10171522 agggtaaataccgcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-ctatttagattttgtccctgtaattttagatt 10171425  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatct 207  Q
    ||| ||||||||||| ||| || ||||| ||||||| |||||    
T  10171424 ctttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 18044205 - 18044153
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    |||||||||||||||||  |||| ||||||||||||||||||| ||||||||||    
T  18044205 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 21144798 - 21144721
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaattt 231  Q
    ||||||||||||| |||| |||| ||| ||  ||| | || ||||||| |||||||||||||||||||| ||||||||    
T  21144798 taatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcataaattacgtccctgtaattt 21144721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 40487779 - 40487738
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  40487779 ttttggtccttgtaatattagcgaattccagttttagtccct 40487738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 2583463 - 2583404
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||| ||||||| ||| |||| ||||||||    
T  2583463 tatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattac 2583404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 21144740 - 21144799
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||||| |||| |||||| |||| ||||  |||||||||||||    
T  21144740 tatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattac 21144799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 21148171 - 21148230
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| | || ||||| ||||||| |||||||||| ||| |||||||||    
T  21148171 tatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattac 21148230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 7689665 - 7689607
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||| |  ||| ||||| |||||||||||||||||| |||||||||||||    
T  7689665 atgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctgaaattac 7689607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 7689816 - 7689758
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||||||||||||| || ||| || || || ||||||| ||||||||||    
T  7689816 taatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcata 7689758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 7689902 - 7689849
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    ||||||||||||||||||  |||| |||||||||||||||||||  |||||||||    
T  7689902 agggtaaatacctcttttc-gtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 10108749 - 10108605
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||| ||||||||||||  |||| |||||||||||| |||||| |||||||||||| |         | ||||||||| |||  || |||||||| |||    
T  10108749 agggttaatacctcttttc-gtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcatatt 10108652  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||  || || || ||||||| ||||||||||    
T  10108651 cttccacttttggtcccttattccaccacgtcagcagaatctgcata 10108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 26136978 - 26136920
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||||||||||||||| ||| || || || || |||| ||||||||||    
T  26136978 taatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcata 26136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 2583700 - 2583588
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||| |||||||  ||||  ||||||||||||||||| |||||||| |||| |         | ||||| ||| |||  |||||||||||||||    
T  2583700 agggtaaatatctcttttc-gtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagatt 2583602  T
Q  166 cttccacttttggt 179  Q
    ||||||||||||||    
T  2583601 cttccacttttggt 2583588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 22494607 - 22494570
Alignment:
Q  328 aaatgagggaccaaaagtggaaaaatctgaaattactg 365  Q
    |||||||||||||||||||||  |||||||||||||||    
T  22494607 aaatgagggaccaaaagtggaggaatctgaaattactg 22494570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 14767574 - 14767650
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||||||| |||||||||||||| ||  || || || ||||||| ||||||||||    
T  14767574 atttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcata 14767650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 20877124 - 20877069
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||| ||||||||||||  |||| |||||||| |||||||||| ||||||||||||    
T  20877124 agggttaatacctcttttg-gtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 21148315 - 21148260
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||  ||||||||||| ||||||| ||||||||||||    
T  21148315 agggtaaatacctcttttc-gtctctgtaatattagtgaattccggttttagtccct 21148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 26136985 - 26136945
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  26136985 gtccctgtaatttcagattcttccacttttggtccctcatt 26136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 26137063 - 26137008
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||||| |||||  |||| ||||||||||| ||||| ||||||||||||||    
T  26137063 agggtaaataccacttttc-gtccctgtaatattagtgaatttcagttttagtccct 26137008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 35367409 - 35367464
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| || |||||||||||||||| |||||| |||||    
T  35367409 agggtaaatacctcttttg-gtccctgcaatattagcgaattccggttttaatccct 35367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 39889673 - 39889629
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||||||||||||  |||  |||||||||||||||||||||||||    
T  39889673 atttagattatgtccctaccatttcagattcttccacttttggtc 39889629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 8e-83; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 9516921 - 9516694
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |    
T  9516921 atttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatctacataaattacgtccttgtaatttcaga 9516822  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||| |||||||    
T  9516821 ttcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtatcatgtatgcagattctgcttacgtggtggaatgagg 9516722  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| ||| |||||||||    
T  9516721 gaccaaaagtggaagaatatgaaattac 9516694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 13132252 - 13132025
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  13132252 atttagattctgtccctgtaatttcatattcttccacttttggtcccttctttcatcaaatcagcagaatctgcataaattacgtccttgtaatttcata 13132153  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    || |||||||||||||||| | ||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  13132152 tttctcccacttttggtccatgtaatttcagattactccacttttagcccctcattttacgtgtcatgtatgcagattctgctgacgtggtgaaatgagg 13132053  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    || ||||||||||| |||||||||||||    
T  13132052 gatcaaaagtggaagaatctgaaattac 13132025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 70 - 363
Target Start/End: Original strand, 3018014 - 3018306
Alignment:
Q  70 taaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttc 169  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||||||||||  |         | ||||||||| |||  || |||||||| |||||||    
T  3018014 taaatacctcttttc-gtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 3018112  T
Q  170 cacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagatt 269  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||| |||    
T  3018113 cacttttggtccctcctttcatcacgtcagcagaatctgcataaattacggccttgtaatttcacattcctcccacttttggtccctataatttcaaatt 3018212  T
Q  270 actccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||||||| | |||||||||||||    
T  3018213 cctccacttttggtccctcattttacgtgtcatgtatgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattac 3018306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 46046802 - 46046508
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||||||  |||| |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  46046802 agggtaaatacct--ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcagatt 46046706  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  46046705 cttccacttttgatccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttca 46046606  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| |||||||||||||||| ||| |||||||||||| ||  ||||||| ||||||||| ||||||||||| ||| |||||||||    
T  46046605 gattcctccacttttgatccctcattttacgtgccatgtatgcagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattac 46046508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 37013085 - 37012791
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||||||| |||  |||| ||||||||||||||||||  |||||||||||| |         | | ||||||| |||  || |||||||| |||    
T  37013085 agggtaaatacctcatttc-gtccctgtaatattagcgaattctggttttagtccctgtataaaaa--aaaattagattttgtccctgtaatttcatatt 37012989  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | ||||||||    
T  37012988 cttccacttttggtcactcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcatattcttcctacttttggtccttgtaatttca 37012889  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||    
T  37012888 aattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattac 37012791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 9396766 - 9396993
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  ||||||||||| ||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |    
T  9396766 atttagattttgtccctataatttcaaatttttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 9396865  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||| |    
T  9396866 ttcctcccacttttgatccctgtaatttcatattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtgttggaatgatg 9396965  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    | |||||||||||| |||||||||||||    
T  9396966 gtccaaaagtggaagaatctgaaattac 9396993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 34064293 - 34064066
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  34064293 atttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcaga 34064194  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||||| || ||| |||| |||||| ||||  |||||| |||||||    
T  34064193 ttcctcctacttttggtccctgtaatttcagattcctccacttttagtccctcattttacatgccatgtatgtagattcggctgatgtggtggaatgagg 34064094  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  34064093 gaccaaaagtggaagaatctgaaattac 34064066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 3273707 - 3273914
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||||||| |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3273707 taatttcatattcttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtccttgtaatttcatattcctcccacttttggt- 3273805  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| ||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||| ||| ||||||||||||||||| ||||||||||| |||    
T  3273806 cctgtaatttcagattactccacgtttggt-cctcattttacgtgccatgtatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaat 3273904  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  3273905 ctgaaattac 3273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 7819081 - 7819308
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||||||||||||||||||||||||  |||||||||||| || || ||||||||||| |||||||||| |||||||||| |    
T  7819081 atttagattttgtccctgtaatttcagattcttccacttttggttcctcctttcatcacgttagtaaaatctgcatcaattacgtccatgtaatttcaga 7819180  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||    
T  7819181 ttcctcccacttttggtccatgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaatgagg 7819280  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| ||||||| |||||    
T  7819281 gaccaaaagtggaagaatctgacattac 7819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 70 - 363
Target Start/End: Complemental strand, 38574343 - 38574052
Alignment:
Q  70 taaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttc 169  Q
    ||||||||| ||||| |||| ||||||||||||||||||  |||||||||||| |         | ||||||||| |||  || |||||||| |||||||    
T  38574343 taaatacct-tttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttcatattcttc 38574246  T
Q  170 cacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagatt 269  Q
    ||||||||||| |||||||||||| |||| |||||||||||| |||| ||||| |||||||||| ||||||||||||||||||| || |||||||| |||    
T  38574245 cacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattgcgtccctgtaatttcagattcctcccacttttggtctctgtaatttcatatt 38574146  T
Q  270 actccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||    
T  38574145 cctccacttttggtccctcattttacatgccatgtatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 38574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 15640782 - 15641009
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||| ||||||||||| ||||||||||||  |||||| ||| |||||||||||||||| |||||||||| |    
T  15640782 atttagattttgtccctgtaatttcatattctttcacttttggtccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaga 15640881  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||| ||| | |||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  15640882 ttcctcccacttttgatccttgtaatttcagattcctccacttttggtccatcattttacgtgtcatgtatgcatattctgctgacgtggtgaaatgagg 15640981  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
     ||||||||||||| |||||||||||||    
T  15640982 aaccaaaagtggaagaatctgaaattac 15641009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 137 - 363
Target Start/End: Original strand, 4355949 - 4356175
Alignment:
Q  137 tttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatat 236  Q
    |||||||| ||| | | |||||||| |||||| ||||||||||| ||| |||||||| || |||| ||||||||||||||||||||||||||||||| ||    
T  4355949 tttagattttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcataaattacgtccttgtaatttcagat 4356048  T
Q  237 tcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgaggg 336  Q
    |||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||    
T  4356049 tcctcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtggtggaataaggg 4356148  T
Q  337 accaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| ||| |||||||||    
T  4356149 accaaaagtggaagaatttgaaattac 4356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 81 - 363
Target Start/End: Original strand, 9618993 - 9619273
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||| |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || |||||||||||||||||||||||||||    
T  9618993 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaa-agatttagattttgtccctgtaatttcagattcttccacttttggtc 9619091  T
Q  181 actcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccactttt 280  Q
     ||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  9619092 cctcctttcatcaagtcaacagaatctgcataaat-acgtccctgtaatttcatattcctcccatttttggtccctgtaatttcagattcctccactttt 9619190  T
Q  281 ggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    | |||||| ||||||||| ||  ||| |||||||||||  ||||||| ||||| ||||||||||||||| ||| |||||||||    
T  9619191 gctccctctttttacgtgccaggtatacagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattac 9619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 81 - 363
Target Start/End: Original strand, 31943962 - 31944244
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||| |||| ||||||||||||||||||| |||||||| ||| |         | ||||||||| |||  || |||||||| ||||||||||||||||||    
T  31943962 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtc 31944061  T
Q  181 actcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccactttt 280  Q
     |||||||||||| |||| ||||| |||||| ||||| |||| |||||||||| |||||||||||||||||||| | |||||||||||| ||||||||||    
T  31944062 tctcctttcatcacgtcaacaaaacctgcatcaattatgtccatgtaatttcagattcctcccacttttggtccatgtaatttcagattcctccactttt 31944161  T
Q  281 ggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||||| ||  ||||||||||||| || ||||||| |||||||||| |||||||||| ||| |||||||||    
T  31944162 ggtccctcattttacgtgccaagtatgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattac 31944244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 31090354 - 31090145
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||||||||||| |||||||||| |||||||||||||||||  | ||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  31090354 taatttcagattcttctacttttggtccctcctttcatcaagtcaatagaatctacataaattacgtccttgtaatttcagatttctcccacttttggtc 31090255  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||  |||||||||||| ||||||||||||||| |||||||||||  ||| |||||| ||||||||  ||||||| ||||||||||||||||||||| |||    
T  31090254 cccgtaatttcagattcctccacttttggtccttcattttacgtaccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaat 31090155  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  31090154 atgaaattac 31090145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 155 - 363
Target Start/End: Original strand, 18667375 - 18667583
Alignment:
Q  155 aatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtcc 254  Q
    ||||||| ||| |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  18667375 aatttcatattgttccacttttggtccctcctttcatcacgtcaacaaaatctgcataaattacgtccctgtaatttcagattcctccaacttttggtcc 18667474  T
Q  255 ctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatc 354  Q
    || |||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||| ||| |||||| |||| ||||| ||||    
T  18667475 ctgtaattttaaattcctccacttttggtccctcattttacgtgccatgtatgcagattctactgacgtggtggaataagggacaaaaactggaagaatc 18667574  T
Q  355 tgaaattac 363  Q
    |||||||||    
T  18667575 tgaaattac 18667583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 48580177 - 48579950
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| ||| |||||||||||||| ||||||||||||  | |||| ||| ||||||||||||||||||||||||||| |    
T  48580177 atttagattttgtccctgtaatttcatattgttccacttttggtccctcctttcatcaccttagcagaatatgcataaattacgtccttgtaatttcaaa 48580078  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||| ||| |||| ||||||||||| ||||||| ||| |||    
T  48580077 ttcctcccacttttggtctctctaatttcaaattcctccacttttgctccctcattttacgtgccatgtatgtagattctgctgacgtggtggaataagg 48579978  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||| || || |||||||||||||    
T  48579977 gaccaaaattgaaagaatctgaaattac 48579950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 18713027 - 18713254
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| ||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| |    
T  18713027 atttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcaga 18713126  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||| |||||||||| | |||||||| ||| ||| ||||||||||||||| |||||||   || |||| ||||||||||| ||||||| ||| |||    
T  18713127 ttcctccctcttttggtccatgtaatttcaaattcctcaacttttggtccctcagtttacgttcaatgtatgtagattctgctgacgtggtggaataagg 18713226  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||| ||||| |||||||||||||    
T  18713227 gaccaaaactggaagaatctgaaattac 18713254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 26252353 - 26252456
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  26252353 taatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtc 26252452  T
Q  254 cctc 257  Q
    ||||    
T  26252453 cctc 26252456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 48259901 - 48260045
Alignment:
Q  219 gtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgct 318  Q
    |||| |||||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| ||||    
T  48259901 gtccatgtaatttcagattcctcctacttttggtccctgttatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagattatgct 48260000  T
Q  319 ggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    | |||| || |||||| || ||||||||||| ||| |||||||||    
T  48260001 gacgtgatggaatgagcgatcaaaagtggaagaatttgaaattac 48260045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 257
Target Start/End: Original strand, 35376164 - 35376347
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattct 167  Q
    ||||||||||| ||||  |||| ||||||||||||||||||  |||||||||||| |        |||  ||||||| ||| ||| |||||| |||||||    
T  35376164 ggtaaatacctattttc-gtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaagat--ttagattttgtctctgtaattttagattct 35376260  T
Q  168 tccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctc 257  Q
    ||||||||||||| |||||||||||| ||||||| |||| |||||||||| |||| |||||   || |||||||||||||||||||||||    
T  35376261 tccacttttggtctctcctttcatcacgtcagcagaatccgcataaattaagtccatgtaa---cagattcctcccacttttggtccctc 35376347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 35376332 - 35376422
Alignment:
Q  273 ccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||| ||||||||||||||||||||| | |||||||||||    
T  35376332 ccacttttggtccctcattttacgtgtcatgtatacagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattac 35376422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 26252418 - 26252531
Alignment:
Q  251 gtccctctaatttcagattactcc-acttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaa 349  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||  ||| ||| |||| ||||||||||||||||    
T  26252418 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtagtggaatgggggaccaaaagtggaa 26252517  T
Q  350 aaatctgaaattac 363  Q
     ||| |||||||||    
T  26252518 gaatatgaaattac 26252531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 41947149 - 41947070
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttca 233  Q
    |||||||| ||| |||||||||||||| || ||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  41947149 taatttcatatttttccacttttggtccctgctttcataaagtcaacagaatctgcataaattacgtccctgtaatttca 41947070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 9396842 - 9396784
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||    
T  9396842 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaatta 9396784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 3018155 - 3018096
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  3018155 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 3018096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 34064217 - 34064276
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||| |||||||||||||    
T  34064217 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattac 34064276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 13131943 - 13132084
Alignment:
Q  70 taaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttc 169  Q
    ||||||||||||||  |||| |||||||||| |||||| | |||||||||||| |         | |||||||||||||   | ||||||||||||||||    
T  13131943 taaatacctcttttc-gtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttc 13132041  T
Q  170 cacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||| || ||| ||||| || ||||||| ||||||||||    
T  13132042 cacttttgatccctcatttcaccacgtcagcagaatctgcata 13132084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 31218365 - 31218305
Alignment:
Q  61 aatagagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||    
T  31218365 aatatagggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccct 31218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 9619358 - 9619303
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||    
T  9619358 agggtaaatacctcttttt-gtccctgtaatattagcgaattctggttttagtccct 9619303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 15641026 - 15640950
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||  || ||||||||||||||||||||||||||  ||| ||||| || ||||||| ||| ||||||    
T  15641026 atttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaatatgcata 15640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 34063983 - 34064093
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattct 167  Q
    ||||||||||||||||  |||| |||||||||| ||||||| ||||||||||||| |         | ||||||||| ||| ||| ||||||||||||||    
T  34063983 ggtaaatacctcttttc-gtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaa-agatttagattttgtctctgtaatttcagattct 34064080  T
Q  168 tccacttttggtc 180  Q
    |||||||||||||    
T  34064081 tccacttttggtc 34064093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 4356024 - 4355965
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||  |||| ||||||||||||||||||||| || ||| |||||||||    
T  4356024 tatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattac 4355965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 9619123 - 9619064
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| |||||||||||||||||| |||||||||||||    
T  9619123 tatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattac 9619064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 26252411 - 26252352
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| |||||||||||||||||| |||||||||||||    
T  26252411 tatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattac 26252352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 46046423 - 46046484
Alignment:
Q  60 aaatagagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||| ||||||||||||| ||||| |||| |||||||||||||||||||  |||||||||||    
T  46046423 aaatatagggtaaatacct-tttttcgtccctgtaatattagcgaattccgattttagtccct 46046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 46046660 - 46046718
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| |||||| ||||||||||| |||||||||||||    
T  46046660 atgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattac 46046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 35376492 - 35376367
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||| |||| |||||||||||| ||||||||||||||||||| |        |||  ||| ||| |||  || |||||||||| ||||||||||||||||    
T  35376492 ttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaagat--ttaaattttgtccctgtaatttcagaatcttccacttttggtc 35376395  T
Q  181 actcctttcatcaagtcagcaaaatctg 208  Q
     ||| || || || ||||||||||||||    
T  35376394 cctcattccaccacgtcagcaaaatctg 35376367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 37012774 - 37012850
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||  || || || ||||||| ||||||||||    
T  37012774 atttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 37012850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 38574035 - 38574111
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||| || || || ||||||| ||||||||||    
T  38574035 atttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcagaatctgcata 38574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 41946964 - 41947019
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| ||||||||||||    
T  41946964 agggtaaatacctcttttc-gtccctgtaatattagtgaattccggttttagtccct 41947019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 48260062 - 48259986
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| ||||||||||||||| || ||| || ||||| ||||||| ||||||||||    
T  48260062 atttagattttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatctgcata 48259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 9397077 - 9396934
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||| ||||||  |||| |||||||||||| |||||| |||||||||||| |        |||  ||||||| |||  || ||||||||||||    
T  9397077 agggtaaatacttcttttc-gtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagat--ttagattttgtccctgtaatttcagatt 9396981  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||| |  || || || || ||||||| ||||||||||    
T  9396980 cttccacttttggaccatcattccaacacgtcagcagaatctgcata 9396934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 18713103 - 18713044
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||| |||| ||||| |||||||||||| ||||| ||| |||||||||    
T  18713103 tatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattac 18713044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 26252615 - 26252565
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagt 118  Q
    ||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  26252615 gggtaaatatctcttttc-gtccctgtaatattagcgaattccagttttagt 26252565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 35376305 - 35376246
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||| |||| ||||| ||| |||||||||||||| ||||| |||||||    
T  35376305 tatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaattac 35376246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 37012942 - 37013001
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||| |||| ||||| ||| |||||||||||||| ||| |||||||||    
T  37012942 tatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattac 37013001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 3273913 - 3273855
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||||||||||||| || ||| ||||| || ||||| | ||||||||||    
T  3273913 taatttcagattcttccacttttgatccctcatttcaccacgtcagtagaatctgcata 3273855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 7819307 - 7819249
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||| |||||||||||||||||||||| ||| || || || ||||||| ||||||||||    
T  7819307 taatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcata 7819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 18667669 - 18667620
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagtttta 116  Q
    ||||| ||||||||||||  |||| ||||||||||||||||||||||||||    
T  18667669 agggttaatacctcttttc-gtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 38574204 - 38574262
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| || || |||| ||||| |||||||||||||||||| ||| |||||||||    
T  38574204 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 38574262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 122
Target Start/End: Original strand, 12520662 - 12520691
Alignment:
Q  93 taatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||||||||||||||    
T  12520662 taatattagcgaattccagttttagtccct 12520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 12904872 - 12904831
Alignment:
Q  321 cgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    ||||||| |||||| |||||||||||||| ||||||||||||    
T  12904872 cgtggtggaatgagagaccaaaagtggaagaatctgaaatta 12904831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 18667432 - 18667375
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatt 361  Q
    |||||||||| || || |||| ||||| |||||||||||||||||| ||| |||||||    
T  18667432 tatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaacaatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 9516611 - 9516662
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    |||||||| |||||||  |||| ||||||||||||||||||| ||||||||||    
T  9516611 ggtaaatatctcttttc-gtccctgtaatattagcgaattccggttttagtcc 9516662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 12904829 - 12904857
Alignment:
Q  152 tataatttcagattcttccacttttggtc 180  Q
    |||||||||||||||||||||||||||||    
T  12904829 tataatttcagattcttccacttttggtc 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 18713271 - 18713227
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||    
T  18713271 atttagattttgtctctgtaatttcagattcttccagttttggtc 18713227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 20069610 - 20069538
Alignment:
Q  137 tttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgc 209  Q
    ||||||||||||  |||| |||| |||||||||||||||||||| ||| ||  | || ||||||| |||||||    
T  20069610 tttagattatgtccctatcatttgagattcttccacttttggtctctcattgaaacatgtcagcagaatctgc 20069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 43312294 - 43312350
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgca 210  Q
    ||||||||||||| ||||||||| ||| ||| ||| |||  ||||||||||||||||    
T  43312294 taatttcagattcctccacttttagtccctcgtttaatcctgtcagcaaaatctgca 43312350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 48259822 - 48259877
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||| |||||||  |||| ||||||||||||||||||| |||||| |||||    
T  48259822 agggtaaatatctcttttc-gtccctgtaatattagcgaattccggttttaatccct 48259877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 136 - 362
Target Start/End: Complemental strand, 7126228 - 7126002
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  7126228 atttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcata 7126129  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| |||    
T  7126128 ttcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagg 7126029  T
Q  336 gaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||| ||||||||||||    
T  7126028 gaccaaaagtggaagaatctgaaatta 7126002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 66 - 362
Target Start/End: Original strand, 17762282 - 17762575
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |        |||  ||| ||| |||  || ||||||||||||    
T  17762282 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagat--ttatattttgttcctgtaatttcagatt 17762378  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| ||||||| |||| || |||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||| |    
T  17762379 cttccacttttggtccctcctttaatcacgtaagcagaatctgcataaattacgtccctgtaatttcatattcctcccgcttttggtccctgtaatttta 17762478  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||| |||||||||||||||||||||||| ||  ||| |||||| ||||||||  ||||||| ||||||||||||||||||||| ||||||||||||    
T  17762479 gattcctccacttttggtccctcattttatgtcccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatta 17762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 67 - 363
Target Start/End: Complemental strand, 24837547 - 24837253
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |         | ||||||||| |||  || |||||||| ||||    
T  24837547 gggtaaatacctcttttc-gtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcaaattc 24837450  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    ||| ||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  24837449 ttctacttttgctccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtccctgtaatttcag 24837350  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||||||||||| |||||||||||||||  ||| ||| |||||||||||  ||||||| ||||||||||||||||||||| ||| |||||||||    
T  24837349 attcctccacttttgatccctcattttacgtaccatgtatacagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 24837253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 24074302 - 24074596
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | |||||||||||| |         ||||||||||| ||| ||| |||||||| |||    
T  24074302 agggtaaatacctcttttc-gtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-atatttagattttgtctctgtaatttcatatt 24074399  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||   |||||||| |||| ||||||||||| ||| | ||||||||    
T  24074400 cttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccccataatttcagattcatcccacttttgatcc-tgtaatttca 24074498  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||||| ||| |||||||||    
T  24074499 aatttctccacttttggtccctcattttacgtgccatatatgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattac 24074596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 6817432 - 6817206
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| |||||||||||||||||||||||||||||||  |||||| ||| |||||||||||||||| |||||||||| |    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaa 6817333  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||| | | | |||||||||||| ||||| ||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||    
T  6817332 ttcctcccacttttgattc-tgtaatttcagattcctccatttttggtcccttattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagg 6817234  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  6817233 gaccaaaagtggaagaatctgaaattac 6817206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 14143901 - 14144195
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |        |||  ||||||| |||  || |||||||| |||    
T  14143901 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagat--ttagattttgtccctgtaatttcatatt 14143997  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||  ||| |||||||| ||||| | |||||||||||||||||||| |||||||||| |||||| ||||||||||||| | ||||||||    
T  14143998 cttccacttttggtacctcatttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattccttccacttttggtccatgtaatttca 14144097  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| |||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  14144098 aattcctccacttttggtccctcattttacgtgccatgtatgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattac 14144195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 994057 - 993831
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||| ||||||||||||||||||||| ||||||| |||| |||| || |||||| ||||||||||||| |||||||||| |    
T  994057 atttagattttgtccctgtaattgcagattcttccacttttggtccctccttttatcatgtcaacagaatctgtataaattacgtccctgtaatttcaga 993958  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||| |||||||    
T  993957 ttcctcccacttttggtccctgtaa-ttcatattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagg 993859  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| ||| |||||||||    
T  993858 gaccaaaagtggaagaatatgaaattac 993831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 4919283 - 4919074
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||||||||||| ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  4919283 taatttcagattcttctacttttgatccctcctttcatcaagtcaacagaatatgcataaattacgtccttgtaatttcatattcctccaacttttggtc 4919184  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
     || |||||||| ||| |||||||||||||||||||||||||||  ||| |||||| ||||||||  ||||||| ||||||||||||||||||||| |||    
T  4919183 actgtaatttcaaattcctccacttttggtccctcattttacgtaccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaat 4919084  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  4919083 atgaaattac 4919074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 68 - 363
Target Start/End: Complemental strand, 41001729 - 41001437
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattct 167  Q
    ||||||||||| ||||| |||| ||||||||||||||||||| |||||||||| | |        |||  ||||||| |||  |||||||||||||||||    
T  41001729 ggtaaatacct-tttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaagat--ttagattttgtccctataatttcagattct 41001633  T
Q  168 tccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcaga 267  Q
    ||||||||||||| ||||||||||||||||| || || || ||||||||| |||  ||||||||||| |||||||||||| |||||||| ||||||||||    
T  41001632 tccacttttggtccctcctttcatcaagtcaacagaacctacataaattatgtcactgtaatttcatcttcctcccacttctggtccctgtaatttcaga 41001533  T
Q  268 ttactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    || ||||| |||| ||||||||||||||||| ||| |||||||||||||||  | ||||| ||||| ||||||||||||||| ||| |||||||||    
T  41001532 ttcctccatttttagtccctcattttacgtgccatgtatgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattac 41001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 20709505 - 20709296
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||||||||| |||  |||||||||||  |||||| ||| |||||||||||| ||| |||||||||| |||||||||||||||| ||    
T  20709505 taatttcatattcttccactttttgtccttcctttcatcacatcagcagaatatgcataaattacatccctgtaatttcagattcctcccacttttgatc 20709406  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  20709405 cctgtaatttcatattcctccactttttgtccctcattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaat 20709306  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  20709305 ttgaaattac 20709296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 29444873 - 29445100
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    |||||||||||||   | |||||||| ||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |    
T  29444873 atttagattatgtccttgtaatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 29444972  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||| | ||||||||||| |||||||| ||| || || |||| ||||||||||||||||||||| |||||| ||| | ||| ||||||| ||| |||    
T  29444973 ttcctcctagttttggtccctgtaatttcaaattcctacattttttgtccctcattttacgtgtcatgtatgcaaattttactgacgtggtggaataagg 29445072  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  29445073 gaccaaaagtggaagaatctgaaattac 29445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 209 - 363
Target Start/End: Original strand, 23979042 - 23979195
Alignment:
Q  209 cataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgc 308  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  23979042 cataaattacgtccttgtaatttcatatttctcccacttttggtccctttaatttcagattactccacgtttggt-cctcattttacgtgtcatgtatgc 23979140  T
Q  309 agattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  23979141 agattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattac 23979195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 24650992 - 24650784
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||| ||||||||||||||||| || |||||||||||| ||||||| |||| ||||||||||| ||| |||||||||||||| |||||||||| ||||    
T  24650992 taattttagattcttccacttttgatccctcctttcatcacgtcagcagaatccgcataaattacatccctgtaatttcatatttctcccacttt-ggtc 24650894  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||| ||||| ||||||| ||||||  ||||||||||||| |||    
T  24650893 cctgtaatttcagattcctccatttttggtccctcattttacgtgccatgtatgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaat 24650794  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  24650793 atgaaattac 24650784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 31799933 - 31799724
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||||| |||||| || |||||||||||| ||||||| ||| |||||||||||||||| | |||||||| |||||||||||||||||||    
T  31799933 taatttcagattcttcctcttttgatccctcctttcatcacgtcagcagaatttgcataaattacgtccctttaatttcagattcctcccacttttggtc 31799834  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| | | ||||||||||||||||||||||||| || ||| ||| || ||||||||  ||||||| ||| ||||||||||||||||| |||    
T  31799833 cctgtaatttcaaaatcctccacttttggtccctcattttacatgccatgtatacaaattctgcttacgtggtggaataagggaccaaaagtggaagaat 31799734  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  31799733 ctgaaattac 31799724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 66 - 257
Target Start/End: Original strand, 14411696 - 14411885
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||| ||| ||| | | ||||||||||||    
T  14411696 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtataaaaaa-agatttatattttgtctatgtaatttcagatt 14411793  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctc 257  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  14411794 cttccacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcagattcctcccacttttggtccctc 14411885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 67 - 363
Target Start/End: Original strand, 18336467 - 18336750
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    ||||||||| |||||||  |||| | |||||||||||||||||  ||||||||||| |         | ||||||||| |||  || |||||||||||||    
T  18336467 gggtaaatatctcttttc-gtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 18336565  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    |||| |||||| || ||||||||||||  |||||| ||| |||||||||||||||| |||||||||| ||||            |||||| |||||||||    
T  18336566 ttccgcttttgatccctcctttcatcacatcagcagaatttgcataaattacgtccctgtaatttcagattc------------gtccctgtaatttcag 18336653  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| |||||||||||||||||||||||||||| ||| ||| || ||||||||  | ||||| ||| ||||| ||||||||||| |||||||||||||    
T  18336654 attcctccacttttggtccctcattttacgtgacatgtatacaaattctgcttacatggtgtaataagggatcaaaagtggaagaatctgaaattac 18336750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 22571370 - 22571161
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||||   ||||| || ||| ||||| || |||| ||||||||||||||||||||||| ||||||||||  ||||||| || |||||||    
T  22571370 taatttcaaattcttctcgttttgctccctcatttcaccacgtcaacaaaatctgcataaattacgtccctgtaatttcaggttcctcctacatttggtc 22571271  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    |||||||||||| |||  ||| ||||||||||||||||| |||| |||   |  || |||||  || ||||||||||||||||||||||||||||| |||    
T  22571270 cctctaatttcatattcatccgcttttggtccctcatttcacgtatcacgcacacatattcttttgacgtggtgaaatgagggaccaaaagtggaagaat 22571171  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  22571170 atgaaattac 22571161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 14411847 - 14411960
Alignment:
Q  251 gtccctctaatttcagattactcc-acttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaa 349  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||| |||||||||||||| ||||||    
T  14411847 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgtcatgtatgtagattctgcttacgtggtggaatgagggaccaaacgtggaa 14411946  T
Q  350 aaatctgaaattac 363  Q
     |||||||||||||    
T  14411947 gaatctgaaattac 14411960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 27159268 - 27159147
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||| | ||||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||||| |||||||||| |    
T  27159268 atttagattttgtccctgtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 27159169  T
Q  236 ttcctcccacttttggtccctc 257  Q
    ||||||||||||||| ||||||    
T  27159168 ttcctcccacttttgatccctc 27159147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 363
Target Start/End: Complemental strand, 30512459 - 30512371
Alignment:
Q  276 cttttggtccctcatttt-acgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  30512459 cttttcgtccctcatttttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattac 30512371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 363
Target Start/End: Complemental strand, 30552799 - 30552711
Alignment:
Q  276 cttttggtccctcatttt-acgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  30552799 cttttcgtccctcatttttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattac 30552711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 363
Target Start/End: Complemental strand, 27159185 - 27159074
Alignment:
Q  251 gtccctctaatttcagattactcc-acttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaa 349  Q
    |||||| |||||||||||| |||| ||||||| |||||||||||||||| | ||| |  ||||| ||||| ||||||| ||| |||||||||||||||||    
T  27159185 gtccctgtaatttcagattcctcccacttttgatccctcattttacgtgccgtatgt--agattttgctgacgtggtggaataagggaccaaaagtggaa 27159088  T
Q  350 aaatctgaaattac 363  Q
     |||||||||||||    
T  27159087 gaatctgaaattac 27159074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 6817122 - 6817265
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| |||||||||||| |        |||  |||||||||||   | ||||||||||||    
T  6817122 agggtaaatacctcttttc-gtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagat--ttagattatgtccatgtaatttcagatt 6817218  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| ||||| || ||||||| ||||||||||    
T  6817219 cttccacttttggtccctcatttcaccacgtcagcagaatctgcata 6817265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 23979279 - 23979136
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || |||||||| ||||    
T  23979279 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcaaattc 23979182  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||| ||| ||||| || ||||||| ||||||||||    
T  23979181 ttccacttttggtccctcatttcaccacgtcagcagaatctgcata 23979136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 7126152 - 7126211
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  7126152 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 7126211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 14411840 - 14411781
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||| ||||||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  14411840 tatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 14411781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 24074446 - 24074387
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  24074446 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 24074387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 7125984 - 7126060
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  |||||||||||||||||||||||||||||| ||  || || || ||||||| ||||||||||    
T  7125984 atttagattttgtccctataatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 7126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 20709279 - 20709355
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||| ||||| || ||||||| ||||||||||    
T  20709279 atttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcata 20709355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 14144044 - 14143985
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||| ||| |||| |||||||||| ||||||||||||| ||| |||||||||    
T  14144044 tatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattac 14143985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 17762425 - 17762366
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||  |||| | ||| |||||||||||||||||| |||||||||||||    
T  17762425 tatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattac 17762366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 29444949 - 29444890
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||| ||| ||| |||||||||    
T  29444949 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattac 29444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 190
Target Start/End: Original strand, 22571090 - 22571198
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    ||||||||| |||||||||||||||||||  ||||||||||| |         | ||||||||||| | ||| |||||||| ||||||||||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaa-atttagattatatctctgtaatttcatattcttccacttttggtc 22571188  T
Q  181 actcctttca 190  Q
     ||| |||||    
T  22571189 cctcatttca 22571198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 24650767 - 24650843
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||||||  ||| || || || ||||||||||||||||||    
T  24650767 atttagattttgttcctgtaatttcatattcttccacttttggtagctcattccaccacgtcagcaaaatctgcata 24650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 24837168 - 24837223
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| ||||||| ||||||||||| ||||||||||||    
T  24837168 agggtaaatacctcttttc-gtccctgtaataatagcgaattccggttttagtccct 24837223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 30512361 - 30512405
Alignment:
Q  247 tttggtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  30512361 tttggtccctgtaatttcagatttttccacttttggtccctcatt 30512405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 30552701 - 30552745
Alignment:
Q  247 tttggtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  30552701 tttggtccctgtaatttcagatttttccacttttggtccctcatt 30552745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 24650934 - 24650993
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||| |||| ||||| |||||| ||||||||||| ||||| |||||||    
T  24650934 tatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaattac 24650993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 29445170 - 29445131
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  29445170 ttttcgtccctgtaatattagcgaattccagttttagtcc 29445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 31799875 - 31799934
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||| ||||||||| |||| ||||| |||||| |||||| |||| |||||||||||||    
T  31799875 tatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaattac 31799934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 17762661 - 17762549
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| |||| |||||||||||||  |||||||||||| |         | ||||||||| |||  | |||||||||||||    
T  17762661 agggtaaatacctcttttc-gtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaa-agatttagattttgtccccataatttcagatt 17762564  T
Q  166 cttccacttttggtc 180  Q
    |||||||||||||||    
T  17762563 cttccacttttggtc 17762549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 24651078 - 24651025
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    ||||||||||||||||||  |||  ||||||||||||||||||| ||||||||||    
T  24651078 agggtaaatacctcttttc-gtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 27159075 - 27159133
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||||||||||||||| ||  || || || ||||||||||||| ||||    
T  27159075 taatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatctacata 27159133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 7126296 - 7126244
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    ||||||||||||||||||   ||| ||||||||||||||||||| |||||||||    
T  7126296 agggtaaatacctcttttca-tccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 27158990 - 27159042
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    ||||| ||||||||||||  |||| ||||||||||||||||| |||||||||||    
T  27158990 agggttaatacctcttttc-gtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 31799640 - 31799751
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| | ||||||||||||||||| |||| ||||||| |         | ||||||||| |||  || |||||||||||||    
T  31799640 gggtaaatacctcttttc-gtccctataatattagcgaattccggtttcagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcagattc 31799737  T
Q  167 ttccacttttggtc 180  Q
    ||||||||||||||    
T  31799738 ttccacttttggtc 31799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 20947095 - 20947059
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttca 190  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  20947095 taatttcagattcctccacttttggtcactcatttca 20947059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 41001610 - 41001646
Alignment:
Q  326 tgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  41001610 tgaaaggagggaccaaaagtggaagaatctgaaatta 41001646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 41424603 - 41424655
Alignment:
Q  156 atttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctg 208  Q
    ||||||||||||||||||||| ||| ||| ||| | || ||||||||||||||    
T  41424603 atttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatctg 41424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 1e-81; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 45969914 - 45970209
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  45969914 agggtaaatacctcttttc-gtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcagatt 45970011  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  45970012 ctttcacttttggtctctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttca 45970111  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||| |||| || ||||||||||||| |||||||||||||    
T  45970112 gatttctccacttttggtccctcattttacgtgtcatgtatgcggattctgcttacgtggtggaatggggaaccaaaagtggaagaatctgaaattac 45970209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 43572456 - 43572685
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatca---agtcagcaaaatctgcataaattacgtccttgtaatttc 232  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||||||||||||   |||||||| |||||||| || |||||||| |||||||||    
T  43572456 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatcaagtcagcagaatctgcacaa-ttacgtccctgtaatttc 43572554  T
Q  233 atattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatg 332  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  43572555 atattcctcccacttttggtccctgtaatttcaaattactccacttttggtccctcattttacgtgtcatttacgcagattctgctgacgtggtgaaatg 43572654  T
Q  333 agggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||||| |||||||||||||    
T  43572655 agggaccaaaagtggaagaatctgaaattac 43572685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 14171965 - 14171670
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||| ||||    
T  14171965 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaataaaa-agatttagattttgtccctgtaatttctgatt 14171868  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||    
T  14171867 cttccacttttggtccttcctttcatcacgtcagcaaaatctgcatcaattacgaccttgtaatttcagattcctcccacttttggtccctgtaatttca 14171768  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||| ||||| |||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||| ||| |||||||||    
T  14171767 gattcctccatttttgatccctcattttacgtgccatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattac 14171670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 30500419 - 30500125
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |         | ||||||||| |||  || |||||||| |||    
T  30500419 agggtaaatacctcttttc-gtccctgtaatattagcgaattccagttttagtccctgtaaaaaaa--aaatttagattttgtccctgtaatttcatatt 30500323  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
     |||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||| | ||||||||    
T  30500322 gttccacttttggtccctcctttcatcacgtcagcaaaatctacataaattacatccctgtaatttcagattcctcccacttttggtccatgtaatttca 30500223  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| || ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  30500222 aattccttcacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattac 30500125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 154 - 361
Target Start/End: Complemental strand, 19113058 - 19112851
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19113058 taatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctcccacttttggtc 19112959  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||| ||||||||||||||||| |||    
T  19112958 cctgtaatttcagatttctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaataagggaccaaaagtggaagaat 19112859  T
Q  354 ctgaaatt 361  Q
     |||||||    
T  19112858 atgaaatt 19112851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 21632981 - 21633190
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21632981 taatttcagattctttcacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtc 21633080  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    | | |||||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||| ||  ||||||| ||||||||||||||||||||| |||    
T  21633081 cttgtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaat 21633180  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  21633181 ctgaaattac 21633190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 49986526 - 49986822
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| ||||||||| || |         | ||||||||| |||  || ||||||||||||    
T  49986526 agggtaaatacctcttttc-gtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagatt 49986624  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||| |||||||||| ||||||||||||| | |  | ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  49986625 cttctacttttggtctctcctttcatcaatttaatagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggtccctgtaatttca 49986724  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| |||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||||||    
T  49986725 gattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 49986822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 67 - 363
Target Start/End: Original strand, 14161871 - 14162165
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    ||||||||| |||||||  |||| |||||||||||||||||||||||||||| ||| |         | |||||||||||||  || |||||||| ||||    
T  14161871 gggtaaatatctcttttc-gtccctgtaatattagcgaattccagttttagttcctataaaaaaaa-agatttagattatgtccctgtaatttcatattc 14161968  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||| | ||||||||||| ||||||||     
T  14161969 ttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctaattttggtccctgtaatttcaa 14162068  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||||| |||||||||||||||||||||| ||| |||||| ||| ||||| ||||||| ||| ||||||||||||||||| |||||||||||||    
T  14162069 attcctccatttttggtccctcattttacgtgccatgtatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattac 14162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 14262415 - 14262120
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || |||||||| |||    
T  14262415 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcatatt 14262318  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
     |||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||| |||||||| | |||||| ||||||||| ||||| ||||||||    
T  14262317 gttccacttttagtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagattccttccacttttgatccctgtaatttca 14262218  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||  |||||| ||| ||||||||||||||||| |||||||||||||    
T  14262217 aattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattac 14262120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 154 - 363
Target Start/End: Original strand, 15328545 - 15328754
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| ||||||||| |||  ||| ||| |||||||| |||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  15328545 taatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggtc 15328644  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  15328645 cctgtaatttcaaattcctccacttttggtctctcattttacgtgtcatatatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaat 15328744  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  15328745 ctgaaattac 15328754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 16721990 - 16722285
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| ||||||||| || |         | ||||||||| |||   | ||||||||||||    
T  16721990 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaa-atttagattttgtccatgtaatttcagatt 16722087  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||||||||||||||| || |||||||||||||| || ||||||||||||||| |||  |||||||||| ||||||||||||| |||||||| ||||||||    
T  16722088 cttccacttttggtcccttctttcatcaagtcaacagaatctgcataaattatgtcactgtaatttcagattcctcccacttctggtccctgtaatttca 16722187  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||  | ||||| ||| ||||||||||||||||| ||| |||||||||    
T  16722188 gattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattac 16722285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 9267353 - 9267059
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| |||||||||||||||||||  ||||||||||| |          | |||||||| |||  || |||| |||||||    
T  9267353 agggtaaatacctcttttc-gtccttgtaatattagcgaattccgattttagtccctgtatataaat--tttttagattttgtccctgtaatatcagatt 9267257  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||| |||||||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||    
T  9267256 cttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattaagtccttgtaatttcagattcctcccacttttggtccttgtaatttca 9267157  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| |||||||||||||||||||||||||||   || |||||||||||||||  |||| || ||||||||||||||||||||| ||| |||||||||    
T  9267156 gattcctccacttttggtccctcattttacgtacaatgtatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattac 9267059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 68 - 363
Target Start/End: Complemental strand, 52553065 - 52552776
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattct 167  Q
    ||||||||| ||||||  |||| |||||||||||||||||| ||||||||||||| |         | ||||||||| ||| ||| |||||||| |||||    
T  52553065 ggtaaatacatcttttc-gtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaa-agatttagattttgtctctgtaatttcatattct 52552968  T
Q  168 tccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcaga 267  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||    ||||||||| |||||||| |    
T  52552967 tccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctccc----ttggtccctgtaatttcaaa 52552872  T
Q  268 ttactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    || || ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||| ||||| ||||||||||| |||||||||||||    
T  52552871 ttccttcacttttggtccctcattttacgtgtcatgtatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattac 52552776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 35995971 - 35995762
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||||||||||||||| || ||||||||| ||| ||| |||||||||||||||||||||||||  || | ||||||||||||||| |||    
T  35995971 taatttcagattcttccacttttggtcccttctttcatcacgtccgcagaatctgcataaattacgtccttgtatatttagattcctcccactttttgtc 35995872  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| ||||||||  || |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||||| |||    
T  35995871 cctgtaatttcatgttcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaat 35995772  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  35995771 ctgaaattac 35995762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 156 - 363
Target Start/End: Complemental strand, 4204999 - 4204792
Alignment:
Q  156 atttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccc 255  Q
    |||||||||||||||||||||| || ||| ||| |||| ||||| | |||||||||||||||| ||| | |||||||| |||||||||||| |||||| |    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctgcataaattacatccatataatttcagattcctcccactattggtctc 4204900  T
Q  256 tctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatct 355  Q
    | |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  4204899 tgtaatttcatattactccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatct 4204800  T
Q  356 gaaattac 363  Q
    ||||||||    
T  4204799 gaaattac 4204792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 33372473 - 33372698
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |    
T  33372473 atttagattttgtccctgtaatttcagattattccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattaagtccttgtaatttcaga 33372572  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||||||||||||| || |||||||| ||| ||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||| |||| ||    
T  33372573 ttcctcccacttttggtctctgtaatttcatattcctccacttttgatccctcattttacgtgtca-gtatgcagattctgctgacgtggtggaatg-gg 33372670  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    || ||||||||||| |||||||||||||    
T  33372671 gatcaaaagtggaagaatctgaaattac 33372698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 136 - 362
Target Start/End: Complemental strand, 20854007 - 20853781
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||  |||||||||| |    
T  20854007 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacataatctgcataaattatgtcactgtaatttcaga 20853908  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||||||| ||||| || |||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||  ||||||| |||||||    
T  20853907 ttcctcccacttctggtctctgtaattttagattcctccacttttggtccctcattttacgtgccatgtatgcagattctacttacgtggtggaatgagg 20853808  T
Q  336 gaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||| ||| ||||||||    
T  20853807 gaccaaaagtggaagaatatgaaatta 20853781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 136 - 362
Target Start/End: Original strand, 45003563 - 45003789
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || ||||||||||||||||||||||| ||| |||||||||||| |||| || |||||| |||||||||||||||||||||||| |    
T  45003563 atttagattttgtccctgtaatttcagattcttccactttttgtccctcctttcatcacgtcaacagaatctgtataaattacgtccttgtaatttcaga 45003662  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||| ||||||||||||| || ||| |||||||||||||||  ||||||| |||||||    
T  45003663 ttcctcccacttttgttccctgtaatttcatattcctccacttttgatccctcattttacatgccatgtatgcagattctgcttacgtggtggaatgagg 45003762  T
Q  336 gaccaaaagtggaaaaatctgaaatta 362  Q
    |||||||||||||| ||| ||||||||    
T  45003763 gaccaaaagtggaagaatatgaaatta 45003789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 136 - 362
Target Start/End: Original strand, 38283617 - 38283843
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  ||||||||||| ||| ||||||||||| || |||||||||||| ||||||| ||||| ||||| |||||||| |||||||| | |    
T  38283617 atttagattttgttcctataatttcatattgttccacttttgatccctcctttcatcacgtcagcagaatctacataagttacgtccctgtaatttaaga 38283716  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    |||||||||||||| |||| | |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||| |||    
T  38283717 ttcctcccactttttgtccgtgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctgacgtgatgaaataagg 38283816  T
Q  336 gaccaaaagtggaaaaatctgaaatta 362  Q
    || ||||||||||| ||||||||||||    
T  38283817 gatcaaaagtggaagaatctgaaatta 38283843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 67 - 363
Target Start/End: Original strand, 5800605 - 5800899
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| |||||||||| |||||| | |||||||||||| |        |  |||||||||||||  || |||||||| ||||    
T  5800605 gggtaaatacctcttttc-gtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaagg-atttagattatgtccctgtaatttcatattc 5800702  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    ||||| |||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||| | ||||||||||| ||||||||     
T  5800703 ttccatttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctagttttggtccctgtaatttcaa 5800802  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||||| ||||||||||||||||||| || ||| |||||| ||| |||||  |||||| ||| ||||||||||||||||| ||| |||||||||    
T  5800803 attcctccatttttggtccctcattttacatgccatgtatgcaaattttgctgaagtggtggaataagggaccaaaagtggaagaatatgaaattac 5800899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 66 - 363
Target Start/End: Complemental strand, 17465746 - 17465452
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||| |||||||| || || |         ||||||| ||| |||  || ||| || |||||    
T  17465746 agggtaaatacctcttttc-gtccttgtaatattagcgaatttcagttttaatctctgtaaaataaa-atatttaaattttgtccctgtaactttagatt 17465649  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    ||| ||||||||||| |||||||||||| |||| |||||| | |||||||||||||  |||||||||| |||||||||||||||||||| | ||||||||    
T  17465648 ctttcacttttggtccctcctttcatcacgtcaacaaaatttacataaattacgtctctgtaatttcagattcctcccacttttggtcc-tgtaatttca 17465550  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     ||| |||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||| |||||| || ||||| ||||| |||||||||||||    
T  17465549 tattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagagatcaaaaatggaagaatctgaaattac 17465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 138 - 363
Target Start/End: Complemental strand, 47575581 - 47575357
Alignment:
Q  138 ttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatatt 237  Q
    ||||||| ||| ||| |||||||||||| ||| |||||||||| |||||||||||| ||||||| |||||||||||||||  ||| |||||||||| |||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcataaattatatccctgtaatttcaaatt 47575482  T
Q  238 cctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgaggga 337  Q
    ||||||| |||| |||||| |||||||| ||| ||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||| ||| |||||    
T  47575481 cctcccattttttgtccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatgcagattctgctgccgtggtggaat-aggga 47575383  T
Q  338 ccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| || ||| | |||||||    
T  47575382 ccaaaagtgaaagaatataaaattac 47575357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 280
Target Start/End: Original strand, 11003731 - 11003943
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||| |||| |||||||||| |||||||| |||||||||||| |         | | ||||||| |||   | ||||||||||||    
T  11003731 agggtaaatacctcttttt-gtccttgtaatattaccgaattccggttttagtccctgtaaataaaa-agacttagattttgtccttgtaatttcagatt 11003828  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||||||||||||||  |||||||||||||||| |||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  11003829 cttccacttttggtccatcctttcatcaagtcaacaaaatatgcatcaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttca 11003928  T
Q  266 gattactccactttt 280  Q
    |||| ||||||||||    
T  11003929 gattcctccactttt 11003943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 17649321 - 17649224
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttca 233  Q
    ||||||||| |||  || |||||||||||| |||||| ||||||| ||||||| ||||||||| || |||||||||||||||||||| ||||||||||    
T  17649321 atttagattttgtccctgtaatttcagattattccacatttggtctctccttttatcaagtcaacagaatctgcataaattacgtccctgtaatttca 17649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 4204775 - 4204851
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||  || ||||||||||||||||||||||||||| ||| ||||| || ||||||| ||||||||||    
T  4204775 atttagattatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcata 4204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 14162248 - 14162106
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||| |        || ||||||||| |||   | |||||||||||||    
T  14162248 gggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgt--aaaaaagagatttagattttgtccttgtaatttcagattc 14162152  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||| ||  || || || ||||||||||| ||||||    
T  14162151 ttccacttttggtcccttattccaccacgtcagcaaaatttgcata 14162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 38283861 - 38283785
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  ||||||||||||||||||||||||||| || ||  |||||||| ||||||| ||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcata 38283785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 14162014 - 14161955
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  14162014 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 14161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 43572702 - 43572623
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaat 215  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| ||| ||||| || ||||||| ||||||| |||||    
T  43572702 atttagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaat 43572623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 47575507 - 47575566
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| ||| |||||||||| |||||||||||||||||    
T  47575507 tatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctgaaattac 47575566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 52552923 - 52552982
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  52552923 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 52552982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 9266974 - 9267118
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || |||||||| |||    
T  9266974 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agatttagattttgtccctgtaatttcatatt 9267071  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| || || || || |||| ||||||||||    
T  9267072 cttccacttttggtccctcattccagcacgtaagcagaatctgcata 9267118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 33372548 - 33372490
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  33372548 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattac 33372490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 35995913 - 35995975
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattactga 366  Q
    |||||||||||||| | |||| |||||  ||||||||||||||||| ||||||||||||||||    
T  35995913 tatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaattactga 35995975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 16722370 - 16722315
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| ||||||||||||||||| ||||||||||||||    
T  16722370 agggtaaatacctcttttc-gtccctgtaatattagcgaatttcagttttagtccct 16722315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 19112763 - 19112818
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||    
T  19112763 agggtaaatacctcttttc-gtccatgtaatattagcgaattccggttttagtccct 19112818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 35741971 - 35741908
Alignment:
Q  58 aaaaatagagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||| ||||| |||||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  35741971 aaaaataaagggttaataccacttttg-gtccctgtaatattagcgaattccagttttagtccct 35741908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 5800748 - 5800689
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||| ||||| ||| |||||||||    
T  5800748 tatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattac 5800689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 14262271 - 14262330
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||||| ||| |||||||||    
T  14262271 tatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattac 14262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 27946246 - 27946189
Alignment:
Q  64 agagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||||  ||||  |||||||||||||||||| ||||||||||||    
T  27946246 agagggtaaatacctcttttc-gtcccagtaatattagcgaattccggttttagtccct 27946189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 35995677 - 35995821
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||   ||| ||||||||||||||||||| |||||||||||| |          | |||||||| |||  || ||||||||||||    
T  35995677 agggtaaatacctcttttcgttcc-tgtaatattagcgaattccggttttagtccctgtagaatttt-ttttttagattttgtccctgtaatttcagatt 35995774  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| || || || || |||| ||||||||||    
T  35995775 cttccacttttggtccctcattccaccacgtaagcagaatctgcata 35995821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 14262049 - 14262147
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||| |||| ||||||||||||||||||| |||||||||| | |         ||||||||||| |||  || |||||||||||||||||||||||||||    
T  14262049 ttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaa-atatttagattttgtccctgtaatttcagattcttccacttttggtc 14262147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 16722134 - 16722075
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || |||||  ||||||||||||||||| |||||||||||||    
T  16722134 tatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaattac 16722075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 19112920 - 19112955
Alignment:
Q  328 aaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||||||||| ||||||||||||||    
T  19112920 aaatgagggaccaaaagtggagaaatctgaaattac 19112955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 19113000 - 19113059
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| |||||||||||||| ||| |||||||||||||    
T  19113000 tatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattac 19113059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 19720333 - 19720387
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||| |||||||  |||| ||||||||||||||||||| ||||||||||||    
T  19720333 gggtaaatatctcttttc-gtccctgtaatattagcgaattccggttttagtccct 19720387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 20853931 - 20853990
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| || || | || ||||| |||||||||||||||||| |||||||||||||    
T  20853931 tatgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattac 20853990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 21633039 - 21632980
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| ||||||||||||||| || |||||||||||||    
T  21633039 tatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaattac 21632980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 30500276 - 30500335
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||| ||||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  30500276 tatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattac 30500335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 45003635 - 45003580
Alignment:
Q  308 cagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| || |||| ||||| ||||||| |||||||||| |||||||||||||    
T  45003635 cagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaattac 45003580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 45970138 - 45970103
Alignment:
Q  328 aaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||||||||||| ||||||||||||||    
T  45970138 aaatgagggaccaaaagtggagaaatctgaaattac 45970103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 14171822 - 14171880
Alignment:
Q  305 atgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||||| |||| ||||| || ||||||||||||||| |||| ||||||||    
T  14171822 atgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattac 14171880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 20853694 - 20853807
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | ||||||  |||| |         | ||||||||| |||  ||||||||||| |||    
T  20853694 agggtaaatacctcttttc-gtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatatt 20853792  T
Q  166 cttccacttttggtc 180  Q
    |||||||||||||||    
T  20853793 cttccacttttggtc 20853807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 21633256 - 21633163
Alignment:
Q  86 gtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    |||| ||||||||||||||||| |||||||||||||| |         | ||||||||| |||  || |||||||||||||||||||||||||||    
T  21633256 gtccctgtaatattagcgaatttcagttttagtccctataaaaaaaa-agatttagattttgtccctgtaatttcagattcttccacttttggtc 21633163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 38283693 - 38283635
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaatta 362  Q
    |||| ||||||||||| |||| ||||| |||||| ||||||||||| ||| ||||||||    
T  38283693 tatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaatta 38283635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 46850551 - 46850513
Alignment:
Q  80 ttttttgtccgtgtaatattagcgaattccagttttagt 118  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  46850551 ttttttgtccatgtaatattagcgaattcctgttttagt 46850513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 4204786 - 4204827
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattt 292  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  4204786 gtccctgtaatttcagattcttccacttttggtccctcattt 4204827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 43572510 - 43572473
Alignment:
Q  326 tgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  43572510 tgaaaggagggaccaaaagtggaagaatctgaaattac 43572473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 43572691 - 43572650
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcattt 292  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  43572691 gtccctgtaatttcagattcttccacttttggtccctcattt 43572650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 45003792 - 45003731
Alignment:
Q  151 ctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||| |||||||||||||||||| ||| || || || || |||| ||||||||||    
T  45003792 ctataatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcata 45003731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 45970295 - 45970183
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| ||||||||||| ||||| | |||||||||||| |         | ||||| ||| |||  || ||||||||||||    
T  45970295 agggtaaatacctcttttc-gtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagatt 45970197  T
Q  166 cttccacttttggt 179  Q
    ||||||||||||||    
T  45970196 cttccacttttggt 45970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 4204943 - 4204999
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaat 360  Q
    |||||||||||| ||| |||| | ||| |||||| ||||||||||| ||||||||||    
T  4204943 tatgcagattctactgacgtgataaaaagagggatcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 14171653 - 14171729
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| ||||||||||||||| || ||| || || || ||||||| ||||||||||    
T  14171653 atttagattttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtcagcagaatctgcata 14171729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 15328771 - 15328695
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||||||| |||||||||||||| ||  || || || ||||||| ||||||||||    
T  15328771 atttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcata 15328695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 21633196 - 21633156
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  21633196 gtccctgtaatttcagattcttccacttttggtccctcatt 21633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 30500108 - 30500184
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||| |||||||||||||||||| ||  || || || ||||||| ||||||||||    
T  30500108 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 30500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 35740830 - 35740870
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccc 121  Q
    |||| |||| ||||||||||||||||||| |||||||||||    
T  35740830 ttttggtccctgtaatattagcgaattccggttttagtccc 35740870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 35995756 - 35995796
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccctcatt 291  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  35995756 gtccctgtaatttcagattcttccacttttggtccctcatt 35995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 35996054 - 35995999
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||| ||||||  |||| |||||||||||||||||||  |||||||||||    
T  35996054 agggtaaatacatcttttc-gtccctgtaatattagcgaattccgattttagtccct 35995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 52552759 - 52552835
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| |||  || |||||||||||||||||||||||| || ||  || || || ||||||| ||||||||||    
T  52552759 atttagattttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcata 52552835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 1477 - 1704
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    |||||||||||||  || ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||| | |||||||| |    
T  1477 atttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacataaattacgtccctataatttcaga 1576  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||  |||||    
T  1577 ttcctcccacttttggtccttgtaatttcagattactccacttttggtccctcattttacgtgccatgtatgcagattctgctgatgtggtgatgtgagg 1676  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||| |||||||||||||    
T  1677 gaccaaaagtggaagaatctgaaattac 1704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 1553 - 1494
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| ||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  1553 tatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattac 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 1786 - 1730
Alignment:
Q  65 gagggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||||||||| ||||||||  |||| |||||||||| |||||||| ||||||||||||    
T  1786 gagggtaaatccctcttttc-gtccctgtaatattaacgaattccggttttagtccct 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 24731934 - 24732232
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatat--ttagattatgtatctataatttcaga 163  Q
    ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | |   ||||||| |||  || ||||||||||    
T  24731934 agggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcaga 24732032  T
Q  164 ttcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaattt 263  Q
    |||||| |||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  24732033 ttcttctacttttggtccctcctttcatcaagtcaacataatctacataaattacgtccttgtaatttcagattcctcccacttttggtccctataattt 24732132  T
Q  264 cagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||| |||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||||||    
T  24732133 cagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 24732232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 67 - 363
Target Start/End: Original strand, 9481182 - 9481476
Alignment:
Q  67 gggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattc 166  Q
    |||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |        |  |||||||||||||  || |||||||| ||||    
T  9481182 gggtaaatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagg-atttagattatgtccctgtaatttcatattc 9481279  T
Q  167 ttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcag 266  Q
    ||||| |||||||| |||||||||||| ||||||| |||||||||||||||||| | |||||||||| |||||||| | ||||||||||| ||||||||     
T  9481280 ttccaattttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcctagttttggtccctgtaatttcaa 9481379  T
Q  267 attactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||| ||||| |||| |||||||||||| |||| ||| |||||| ||| ||||| ||||||| ||| ||||||||||||||||| |||||||||||||    
T  9481380 attcctccattttttgtccctcattttgcgtgccatgtatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattac 9481476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 30459194 - 30458985
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||| ||||||||||| |||||||||||| || |||| ||||| |||||||||||||| | |||||||| |||||||||||||||||||    
T  30459194 taatttcagattctttcacttttggtctctcctttcatcacgttagcataatctccataaattacgtccctataatttcaaattcctcccacttttggtc 30459095  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    | | ||||||||||||| | |||||||| || ||||||||||||||||| |||||||||||||||| |||||||||||||| ||| |||||| ||| |||    
T  30459094 cttgtaatttcagattatttcacttttgatctctcattttacgtgtcatgtatgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaat 30458995  T
Q  354 ctgaaattac 363  Q
    ||||||||||    
T  30458994 ctgaaattac 30458985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 10322024 - 10321814
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    ||||||||||||||| |||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  10322024 taatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcctcccacttttggtt 10321925  T
Q  254 cctctaatttcagattactcc-acttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaa 352  Q
    | | ||||||||||||||||| | |||| | |||| |||||||||| ||| ||||||||| |||||| ||||||||||||||||| |||||||| || ||    
T  10321924 catgtaatttcagattactccaatttttagccccttattttacgtgccatgtatgcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaa 10321825  T
Q  353 tctgaaattac 363  Q
    | |||||||||    
T  10321824 tatgaaattac 10321814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 155 - 363
Target Start/End: Complemental strand, 26385566 - 26385362
Alignment:
Q  155 aatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtcc 254  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    ||| ||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  26385566 aatttcatattcttccacttttggtctctcctttcatcaagtcat---aatatgcataaat-acgtccctgtaatttcatattcctcccagttttggtcc 26385471  T
Q  255 ctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatc 354  Q
    || |||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||||||  ||||||| ||||||||||||||||||||| |||     
T  26385470 ctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatacagattctgcttacgtggtggaatgagggaccaaaagtggaagaata 26385371  T
Q  355 tgaaattac 363  Q
    | |||||||    
T  26385370 taaaattac 26385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 30618029 - 30618255
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcata 235  Q
    ||||||||| |||  || |||||||| ||| |||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||| |||||||||| |    
T  30618029 atttagattttgtccctgtaatttcatattgttccacttttggtccctccttttatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 30618128  T
Q  236 ttcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagg 335  Q
    ||| ||||||||||| || || |||||||| ||| |||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| ||     
T  30618129 ttc-tcccacttttgatcactgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgtagattctgctgacgtggtggaataaga 30618227  T
Q  336 gaccaaaagtggaaaaatctgaaattac 363  Q
    ||| |||||||||| ||||| |||||||    
T  30618228 gacaaaaagtggaagaatctaaaattac 30618255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 154 - 363
Target Start/End: Complemental strand, 2299602 - 2299395
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  2299602 taatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctgcataaattacgtccctgta-tttcagattcctcccacttttggtc 2299504  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    | | |||||| ||||| | |||||||||||||||||||||||||| ||| ||| || ||||||||  ||||||| |||||||||| |||||||||| |||    
T  2299503 cttgtaattttagattccgccacttttggtccctcattttacgtgccatgtatacatattctgcttacgtggtggaatgagggactaaaagtggaagaat 2299404  T
Q  354 ctgaaattac 363  Q
     |||||||||    
T  2299403 -tgaaattac 2299395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 33714731 - 33714571
Alignment:
Q  203 aatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcat 302  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||||||||  |||    
T  33714731 aatctgcataaattacgtccttgtaatttcagattcctctcacttttggtctctgtaatttcagattcctccacttttggtccctcattttacgtaccat 33714632  T
Q  303 atatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
     |||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||||||    
T  33714631 gtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 33714571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 152 - 318
Target Start/End: Complemental strand, 3230157 - 3229992
Alignment:
Q  152 tataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttgg 251  Q
    |||||||||| |||||| |||||||||||| || |||||||| |||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  3230157 tataatttcatattctttcacttttggtca-tcttttcatcacgtcaacagaatctgcataaatcacgtccctgtaatttcatattcctcccacttttgg 3230059  T
Q  252 tccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgct 318  Q
    ||| | |||||||| ||| |||||||||||||||||||||||| || |||| |||||||||||||||    
T  3230058 tccttgtaatttcatattcctccacttttggtccctcattttatgtttcatgtatgcagattctgct 3229992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 363
Target Start/End: Complemental strand, 14681174 - 14680966
Alignment:
Q  155 aatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtcc 254  Q
    ||||| |||||| ||||||||||||| ||  ||| |  | ||||| | |||||||| | ||||||||| |||||||||| ||| ||| ||||||||||||    
T  14681174 aattttagattcctccacttttggtcccttatttaactacgtcagtagaatctgcacatattacgtccctgtaatttcagattactctcacttttggtcc 14681075  T
Q  255 ctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatc 354  Q
     | |||||||||||| |||||||||||||| ||| ||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||     
T  14681074 atataatttcagatttctccacttttggtctctcttttcacgtgtcatgtatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaata 14680975  T
Q  355 tgaaattac 363  Q
    |||||||||    
T  14680974 tgaaattac 14680966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 242 - 363
Target Start/End: Complemental strand, 18500520 - 18500398
Alignment:
Q  242 ccacttttggtccctctaatttc-agattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggacca 340  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  18500520 ccacttttggtccctgtaatttttagattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtggtggaatgagggacca 18500421  T
Q  341 aaagtggaaaaatctgaaattac 363  Q
    ||||||||| ||| |||||||||    
T  18500420 aaagtggaagaatatgaaattac 18500398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 32017731 - 32017620
Alignment:
Q  252 tccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaa 351  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| | ||||||||||||||| |    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtggtggaataaaggaccaaaagtggaaga 32017632  T
Q  352 atctgaaattac 363  Q
    ||||||||||||    
T  32017631 atctgaaattac 32017620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 33637644 - 33637747
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||| |||||||||||||||||||| |||||||||| | ||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  33637644 taattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcatagattacgtccctgtaatttcagattcctcccacttttggtc 33637743  T
Q  254 cctc 257  Q
    ||||    
T  33637744 cctc 33637747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 18500640 - 18500506
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||| |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| |||| |||||||||| || | | ||||||||||||    
T  18500640 taattttagattcttccacttttggtccctcctttcatcaaggcaacagaatctgcataaattatgtccctgtaatttcagatcctttccacttttggtc 18500541  T
Q  254 cctctaa-tttcagattactccacttttggtccct 287  Q
    ||| ||| ||| ||||| |||||||||||||||||    
T  18500540 cctgtaatttttagattcctccacttttggtccct 18500506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 32017882 - 32017695
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||| |||||||  |||| ||||||||||||||||||| |||||||||||| |        |||  ||||||| |||  || |||||||| |||    
T  32017882 agggtaaatatctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagat--ttagattttgtccctgtaatttcatatt 32017786  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctc 257  Q
    ||||||||||||||| |||||||||||| ||||||  ||| |||||||||||| ||| |||||||||| |||||| ||||||||||||||||    
T  32017785 cttccacttttggtccctcctttcatcacgtcagcggaatatgcataaattacatccctgtaatttcaaattcct-ccacttttggtccctc 32017695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 33637709 - 33637822
Alignment:
Q  251 gtccctctaatttcagattactcc-acttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaa 349  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||||||| || |||||||||||||||| ||||||| ||||||||| |||||||| ||    
T  33637709 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgttatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtgaaa 33637808  T
Q  350 aaatctgaaattac 363  Q
     ||| |||||||||    
T  33637809 gaatatgaaattac 33637822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 17142880 - 17142798
Alignment:
Q  205 tctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccct 287  Q
    |||| |||||||| |||| |||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  17142880 tctgtataaattaggtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 9854122 - 9854181
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattac 9854181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 9854180 - 9854122
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||    
T  9854180 taatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatctgcata 9854122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 19284196 - 19284258
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtca 198  Q
    ||||||||| |||  || ||||||||||||||||||||||||||| |||||||||||| ||||    
T  19284196 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatgtca 19284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 30458968 - 30459044
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||||||  || |||||||||||||||| |||||| ||| ||| ||||| || ||||||| ||||||||||    
T  30458968 atttagattatgtcactgtaatttcagattcttcaacttttagtctctcatttcaccacgtcagcagaatctgcata 30459044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 9481325 - 9481266
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||| ||||| ||| |||||||||    
T  9481325 tatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattac 9481266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 10321966 - 10322025
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| || |||||||||||| || |||||||||||||    
T  10321966 tatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattac 10322025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 30618105 - 30618046
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||| ||| |||||||||    
T  30618105 tatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattac 30618046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 33637702 - 33637643
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||| ||||| |||||||    
T  33637702 tatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaattac 33637643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 14680949 - 14681025
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||  || ||||| || ||||||| ||||||||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcata 14681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19284130 - 19284181
Alignment:
Q  68 ggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    ||||||||||||||||  || | ||||||||||||||||||||||||||||||    
T  19284130 ggtaaatacctcttttc-gttcatgtaatattagcgaattccagttttagtcc 19284181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 18500314 - 18500457
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| | ||||||||||||||| | |||||||||||| |        |  ||||||||| |||  || |||||||| |||    
T  18500314 agggtaaatacctcttttc-gtccctataatattagcgaatttcggttttagtccctgtaagaaaaag--atttagattttgtccctgtaatttcatatt 18500410  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||| ||| || || || || |||| ||||||||||    
T  18500411 cttccacttttggtccctcattccaccacgtaagcagaatctgcata 18500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 18500582 - 18500641
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||||||||||| || | || ||||| |||||||||||||||||| ||||| |||||||    
T  18500582 tatgcagattctgttgccttgatgaaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 32017739 - 32017798
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||| |||| |||| |||| ||||| |||||||||||||||||| ||| |||||||||    
T  32017739 tatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattac 32017798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 9481475 - 9481417
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    ||||||||||||||||||||||||||| ||  || || || ||||||||||| ||||||    
T  9481475 taatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcata 9481417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 17142744 - 17142798
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccacttttggtcactcctttca 190  Q
    |||||||||||||  || |||||||| |||||||||||||||||| ||| |||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttca 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | ||||||||||    
T  18500708 agggtaaatacctcttttc-gtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 10321746 - 10321787
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  10321746 ttttcgtccctgtaatattagcgaattccggttttagtccct 10321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 15942447 - 15942410
Alignment:
Q  136 atttagattatgtatctataatttcagattcttccact 173  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  15942447 atttagattatgtctctataatttcatattcttccact 15942410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 19284250 - 19284213
Alignment:
Q  326 tgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  19284250 tgaaaggagggaccaaaagtggaagaatctgaaattac 19284213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 24732321 - 24732273
Alignment:
Q  61 aatagagggtaaatacctcttttttgtccgtgtaatattagcgaattcca 110  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||||    
T  24732321 aataaagggtaaatacctcttttc-gtccctgtaatattagcgaattcca 24732273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 26385649 - 26385598
Alignment:
Q  70 taaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||  |||| |||||||||||||||||||  |||||||||||    
T  26385649 taaatacctcttttc-gtccctgtaatattagcgaattccgattttagtccct 26385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 146; Significance: 8e-77; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 66 - 363
Target Start/End: Original strand, 4561 - 4857
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||||||||  |||| |||||||||||||||||||  ||||||||||| |         | ||||| ||| |||  || |||||| |||||    
T  4561 agggtaaatacctcttttc-gtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagatt 4659  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctctaatttca 265  Q
    |||| |||||||||| ||||||| ||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  4660 cttctacttttggtccctccttttatcaagtcaacagaatctgcataaattacgtccgtgtaatttcagattcctcccacttttggtccctgtaatttca 4759  T
Q  266 gattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||| |||||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||||||    
T  4760 gattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattac 4857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 4941 - 4886
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| |||||||||||| |||||| |||||| |||||    
T  4941 agggtaaatacctcttttc-gtccctgtaatattagcaaattccggttttaatccct 4886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 133; Significance: 5e-69; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 159 - 363
Target Start/End: Original strand, 8413 - 8616
Alignment:
Q  159 tcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctct 258  Q
    |||||||||| ||||||||||| |||||||||||| |||| |||||||||||| |||||||||| |||||||||| |||||||||||||||||||| | |    
T  8413 tcagattctttcacttttggtctctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggtccttgt 8512  T
Q  259 aatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaa 358  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||    
T  8513 aatttcagattcctccatttttggt-cctcattttacgtgtcatgtatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaa 8611  T
Q  359 attac 363  Q
    |||||    
T  8612 attac 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 8687 - 8557
Alignment:
Q  81 tttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttccacttttggtc 180  Q
    ||||||| | || |||||||||||||||| ||||||||||||||         | ||||||||| |||  || |||||| ||||||||||||||||||||    
T  8687 tttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaa-agatttagattttgtccctgtaattttagattcttccacttttggtc 8589  T
Q  181 actcctttcatcaagtcagcaaaatctgcata 212  Q
     ||| || || || ||||||| ||||||||||    
T  8588 cctcattccaccacgtcagcagaatctgcata 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 8324 - 8378
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccc 121  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | |||||||||||    
T  8324 agggtaaatacctcttttc-gtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 122; Significance: 2e-62; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 134 - 363
Target Start/End: Complemental strand, 4182 - 3953
Alignment:
Q  134 atatttagattatgtatctataatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttca 233  Q
    |||||||||||||||   | ||||||||||||||| || |||||||| |||||||||||| ||||||| ||||||||||||||| |||  ||||||||||    
T  4182 atatttagattatgttgttgtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcataaattatgtctctgtaatttca 4083  T
Q  234 tattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatga 333  Q
     ||||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||| || ||| | |||||||||||||| | |||||||||||    
T  4082 gattcctcccacttttggtcactgtaatttcatattcctccacttttggtccctcattttacttgccatgtgtgcagattctgctgacatggtgaaatga 3983  T
Q  334 gggaccaaaagtggaaaaatctgaaattac 363  Q
    | |||||| ||||||| ||| |||||||||    
T  3982 gcgaccaacagtggaagaatttgaaattac 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 210
Target Start/End: Original strand, 3868 - 4010
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    |||||||||| |||||||  |||| ||||||||||||||||||| |||||||||||| |         | |||||||||||||  || |||||||| |||    
T  3868 agggtaaatatctcttttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-agatttagattatgtccctgtaatttcaaatt 3965  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgca 210  Q
    |||||||| |||||| ||| ||||| || ||||||| ||||||||    
T  3966 cttccactgttggtcgctcatttcaccatgtcagcagaatctgca 4010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 4104 - 4163
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| |||||||||||| || || |||||||||||||    
T  4104 tatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattac 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 154 - 362
Target Start/End: Complemental strand, 512 - 305
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||||||| |||||||||||||  ||||||| ||||  |||||| ||||||||||||||||||| ||||||||||| |||||||||  ||||||||    
T  512 taatttcagattattccacttttggtatctcctttaatcacatcagcagaatctgcataaattacgtc-ttgtaatttcagattcctcccgattttggtc 414  T
Q  254 cctctaatttcagattactccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaat 353  Q
    ||| |||||||||||| ||| |||||||||||||||||||||||  ||| |||||| ||||||||   |||||| ||||||||||||||||||||| |||    
T  413 cctgtaatttcagattcctctacttttggtccctcattttacgtaccatgtatgcaaattctgcttatgtggtggaatgagggaccaaaagtggaagaat 314  T
Q  354 ctgaaatta 362  Q
    |||||||||    
T  313 ctgaaatta 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 7579 - 7389
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagatt 165  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||    
T  7579 agggtaaatacctattttc-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagatt 7481  T
Q  166 cttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtccctc 257  Q
    |||| ||||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  7480 cttctacttttggtctatcctttcatcaagtcaacaaaatctgcataaattacatccttgtaatttcagattcctaccacttttggtccctc 7389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 7420 - 7310
Alignment:
Q  258 taatttcagattact-ccacttttggtccctcattttacgtgtcatatatgcag----attctgctggcgtggtgaaatgagggaccaaaagtggaaaaa 352  Q
    |||||||||||| || |||||||||||||||||||||||||  ||| |||||||    ||| ||||  ||||||| ||||||||||| ||||||||| ||    
T  7420 taatttcagattcctaccacttttggtccctcattttacgtaccatgtatgcagtcagattttgcttccgtggtggaatgagggaccgaaagtggaagaa 7321  T
Q  353 tctgaaattac 363  Q
    | |||||||||    
T  7320 tatgaaattac 7310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 4952 - 5042
Alignment:
Q  273 ccacttttggtccctcattttacgtgtcatatatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||  ||||||| ||||||||||||||||||||| ||||| |||||||    
T  4952 ccacttttggtccctcattttacgtgccatgtatgtagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattac 5042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 4879 - 4932
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtcc 120  Q
    |||||||||||||||||||  ||| ||||||||||||||||| | ||||||||||    
T  4879 agggtaaatacctctttttgttcc-tgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 4929 - 4967
Alignment:
Q  219 gtccttgtaatttcatattcctcccacttttggtccctc 257  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  4929 gtccatgtaatttcatatttctcccacttttggtccctc 4967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 15925 - 15800
Alignment:
Q  154 taatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccttgtaatttcatattcctcccacttttggtc 253  Q
    |||||||| |||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||   |  |||||||||| |||||||||||||||||||    
T  15925 taatttcatattctttcacttttggtctctcctttcatcacgtcagcagaatctgcataaatta-tacgctgtaatttcagattcctcccacttttggtc 15827  T
Q  254 cctctaatttcagattactccactttt 280  Q
     || |||||||| ||| ||| ||||||    
T  15826 tctgtaatttcaaattcctcaactttt 15800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 15867 - 15926
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||| || ||| |||||||||    
T  15867 tatgcagattctgctgacgtgatgaaaggagagaccaaaagtgaaagaatatgaaattac 15926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 16007 - 15955
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtc 119  Q
    |||||||||| |||||||  |||| ||||||||||||||||||| |||||||||    
T  16007 agggtaaatatctcttttc-gtccatgtaatattagcgaattccggttttagtc 15955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 12355 - 12217
Alignment:
Q  72 aatacctcttttttgtccgtgtaatattagcgaattccagttttagtccctttnnnnnnnngatatttagattatgtatctataatttcagattcttcca 171  Q
    ||||||||||||  |||| ||||||||||||||||||| |||||||||||| |         | ||||||||| |||  || ||||||||||||||||||    
T  12355 aatacctcttttc-gtccctgtaatattagcgaattccggttttagtccctataaaaaaaa-agatttagattttgtccctgtaatttcagattcttcca 12258  T
Q  172 cttttggtcactcctttcatcaagtcagcaaaatctgcata 212  Q
    |||||||||  ||||||||||| ||||||| ||||||||||    
T  12257 cttttggtccatcctttcatcacgtcagcagaatctgcata 12217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 12217 - 12276
Alignment:
Q  304 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtggaaaaatctgaaattac 363  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||| |||||||||||||    
T  12217 tatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattac 12276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 4666 - 4721
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| || |||||||||||||||||||||||||||||    
T  4666 agggtaaatacctctttta-gtccctgcaatattagcgaattccagttttagtccct 4721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 4745 - 4781
Alignment:
Q  251 gtccctctaatttcagattactccacttttggtccct 287  Q
    |||||| |||||||||||| |||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 6058 - 6003
Alignment:
Q  66 agggtaaatacctcttttttgtccgtgtaatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||  |||| || ||||||||||||||||  |||||||||||    
T  6058 agggtaaatacctcttttg-gtccctgcaatattagcgaattccgattttagtccct 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 255 - 226
Alignment:
Q  93 taatattagcgaattccagttttagtccct 122  Q
    ||||||||||||||||||||||||||||||    
T  255 taatattagcgaattccagttttagtccct 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University