View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2445_high_20 (Length: 305)
Name: NF2445_high_20
Description: NF2445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2445_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5344289 - 5344581
Alignment:
| Q |
1 |
aattaccacctaaaatcttgtgatataaggagaataaattaaatgaaaaggttgcaatcatgactaactaatcgaaaaggctttaaatctagatttcaaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
5344289 |
aattaccacctaaaatcttgtgatataaggagaataaattaaatgaaaaggttgcaatcatgactaactaatcgaaaaggctttaaatctaaatttcaaa |
5344388 |
T |
|
| Q |
101 |
cctatctatcttttcgtatttttgaactatccgtataatggtcttagatggcctttaataacttctgcaacaatattataaataaaatataaccaatgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5344389 |
cctatctatcttttcgtatttttgaactatccgtataatggtcttagatggcctttaataacttctgcaacaatattataaataaaatataaccaatgtt |
5344488 |
T |
|
| Q |
201 |
tagtttccactctcgaggttttatttccactgttgaggtttgtgattgatgaattgtaagtgtttttatatactttataacgcttctccccta |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5344489 |
tagtttccactctcgaggttttatttccactgttgaggtttgtgattgatgaattgtaagtgtttttatatactttataacgcttctccccta |
5344581 |
T |
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