View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2445_low_25 (Length: 340)
Name: NF2445_low_25
Description: NF2445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2445_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 35 - 329
Target Start/End: Complemental strand, 4188675 - 4188380
Alignment:
| Q |
35 |
tacaagttttattacaagcaatgaaaattactacaaatttaagaaaatgaagtttg-catatatacttgaccaatatnnnnnnngtttggcataaataaa |
133 |
Q |
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| T |
4188675 |
tacaagttttattacaagcaatgaaaattactacaaatttaagaaaatgaagtttggcataaatacttgaccaataaaataaaagtttggcataaataaa |
4188576 |
T |
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| Q |
134 |
gcagatagaaattnnnnnnngggaatgctaatcattagttgtattgttaatcataccaactacatagatcaattgagactttatctttgtcgtgattgta |
233 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
4188575 |
gcagatagaaattaaaaaaagggaatgctaatcattagttgtattgttaatcataccaactacatagatcaattgagactttatgtttgtcgtgattgta |
4188476 |
T |
|
| Q |
234 |
taaaaggtgttagtatggccctacaattatcaattattaatcttaaaatacaaacttccgaacaataccagccagggaaaaccatttcagattcat |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
4188475 |
taaaaggtgttagtatggccctacaattatcaattattaatcttaaaatacaaacttccgaacaatacaagccagggaaaaccatttcagattcat |
4188380 |
T |
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