View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2445_low_35 (Length: 293)
Name: NF2445_low_35
Description: NF2445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2445_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 34448956 - 34449124
Alignment:
| Q |
65 |
tttatacctcatgttaatcctttgatctgaaaatatttgggattgtatgttgttttgaaagttccttttatgcaaaatattatccccctcaatttttaga |
164 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
34448956 |
tttatacctcatgttaatcctttgatctgaaaatatttgggattgtatgttgttttgaaagttccttttatgcaaaatattattcccctcaatttttaga |
34449055 |
T |
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| Q |
165 |
ataatctaaatcagtgttattgatggcggacagccaaaaatatgtcatttcaagccgccgtaaaactct |
233 |
Q |
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|||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34449056 |
ataatctaaatcagtgttgttgttggcggacagccaaaaatatgtcatttcaagcagccgtaaaactct |
34449124 |
T |
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Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 65 - 232
Target Start/End: Original strand, 34475240 - 34475407
Alignment:
| Q |
65 |
tttatacctcatgttaatcctttgatctgaaaatatttgggattgtatgttgttttgaaagttccttttatgcaaaatattatccccctcaatttttaga |
164 |
Q |
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||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||| |
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| T |
34475240 |
tttatacctcatggtaattctttgatctgaaaatatttgggattgtatgtcgttttgaaagttccttttatgcaaaatatcattcccctcattttttaga |
34475339 |
T |
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| Q |
165 |
ataatctaaatcagtgttattgatggcggacagccaaaaatatgtcatttcaagccgccgtaaaactc |
232 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
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| T |
34475340 |
ataatcttaatcagtgttattgatggcggacagccaaaaatatgtaatttcaagccaccgtaaaactc |
34475407 |
T |
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