View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2445_low_38 (Length: 282)
Name: NF2445_low_38
Description: NF2445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2445_low_38 |
 |  |
|
| [»] scaffold0363 (1 HSPs) |
 |  |  |
|
| [»] scaffold0063 (1 HSPs) |
 |  |  |
|
| [»] scaffold0093 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0363 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 52 - 220
Target Start/End: Original strand, 6628 - 6796
Alignment:
| Q |
52 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatc |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6628 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccgtgtccaagtgctaccaaaggccgacgttgaagcacccacatc |
6727 |
T |
 |
| Q |
152 |
attgttgttgtagctctgccgagtaggtttatgaggggctgcctcggctacagcaaattgttttcctcg |
220 |
Q |
| |
|
|||||||||| | ||||||||||||| ||| | || ||| ||||||||||| ||| ||||| ||||| |
|
|
| T |
6728 |
cttgttgttgttgttctgccgagtaggcttagggggtgctacctcggctacaacaatctgtttccctcg |
6796 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 109; Significance: 7e-55; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 52 - 220
Target Start/End: Complemental strand, 14412083 - 14411915
Alignment:
| Q |
52 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatc |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14412083 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccgtgtccaagtgctaccaaaggccgacgttgaagcacccacatc |
14411984 |
T |
 |
| Q |
152 |
attgttgttgtagctctgccgagtaggtttatgaggggctgcctcggctacagcaaattgttttcctcg |
220 |
Q |
| |
|
|||||||||| | ||||||||||||| ||| | || ||| ||||||||||| ||| ||||| ||||| |
|
|
| T |
14411983 |
cttgttgttgttgttctgccgagtaggcttagggggtgctacctcggctacaacaatctgtttccctcg |
14411915 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 52 - 203
Target Start/End: Complemental strand, 21591906 - 21591755
Alignment:
| Q |
52 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatc |
151 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||| |
|
|
| T |
21591906 |
cagagaccggaaccctctgagttgtagtaacagtcgaagcaaccggaaccggaacccgtgtccaagtactaccaatggccgacgttgaagcacgcacatc |
21591807 |
T |
 |
| Q |
152 |
attgttgttgtagctctgccgagtaggtttatgaggggctgcctcggctaca |
203 |
Q |
| |
|
|||||||||| | ||| ||||||||| ||| | || ||| ||||||||||| |
|
|
| T |
21591806 |
cttgttgttgttgttctaccgagtaggcttagggggtgctacctcggctaca |
21591755 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 220
Target Start/End: Complemental strand, 23600650 - 23600493
Alignment:
| Q |
57 |
accggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgt |
156 |
Q |
| |
|
||||||||||||||||| |||| |||| ||||||||||| ||||| | |||| ||||||||||| || |||| | ||||||||||||||| |||| |
|
|
| T |
23600650 |
accggaaccctctgagtagtagcaacaatcgaagcaaccagaacccg------tgtctaagtgctaccaatgaccgatggtgaagcacccacatccttgt |
23600557 |
T |
 |
| Q |
157 |
tgttgtagctctgccgagtaggtttatgaggggctgcctcggctacagcaaattgttttcctcg |
220 |
Q |
| |
|
|||||| | ||||||||||||||||| | |||||| ||||||||||| || |||||| ||||| |
|
|
| T |
23600556 |
tgttgttgttctgccgagtaggtttagggggggctacctcggctacaataatttgtttccctcg |
23600493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 29820270 - 29820182
Alignment:
| Q |
66 |
ctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcatt |
154 |
Q |
| |
|
||||||||||| |||| || |||||| |||||| || |||||| ||| ||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
29820270 |
ctctgagtggttgtaattgttgaagcagccggaatcgaaacccacgtctaagtgctaccattggccgaagtggaagcacccacatcatt |
29820182 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 104; Significance: 7e-52; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 22168862 - 22169013
Alignment:
| Q |
52 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatc |
151 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22168862 |
cagagatcggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccgtgtccaagtgctaccaatggccgacgttgaagcacccacatc |
22168961 |
T |
 |
| Q |
152 |
attgttgttgtagctctgccgagtaggtttatgaggggctgcctcggctaca |
203 |
Q |
| |
|
|||||||||| | ||| ||||||||| ||| | || ||| ||||||||||| |
|
|
| T |
22168962 |
cttgttgttgttgttcttccgagtaggcttagggggtgctacctcggctaca |
22169013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 20630864 - 20630791
Alignment:
| Q |
52 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctacca |
125 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||||| |
|
|
| T |
20630864 |
cagagaccggaaccctctaagtggtagtaacagtcgaagcaacaggaaccggaaaccgtgtccaagtgctacca |
20630791 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 5115479 - 5115381
Alignment:
| Q |
57 |
accggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattg |
155 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||| | | || ||||||||||||| || |||||||||||||||||| |
|
|
| T |
5115479 |
accggtaccctctgagtggtagtaacagtcgaaacaaccggtattggaacccatgtaccattgttaccattggccgatgtcgaagcacccacatcattg |
5115381 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 220
Target Start/End: Original strand, 3728937 - 3729104
Alignment:
| Q |
52 |
cagagaccggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatc |
151 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| || ||||| |||||||||| |
|
|
| T |
3728937 |
cagagaccagaaccctttgagtggtagtaacagtcgaagcaaccggaaccggaacccgtgtccaagtgctaccaatggccaacattgaatcacccacatc |
3729036 |
T |
 |
| Q |
152 |
attgttgttgtagctctgccgagtaggtttatgaggggctgcctcggctacagcaaattgttttcctcg |
220 |
Q |
| |
|
|||||||||| | ||||||||||||| ||| | |||||| ||||||||||| ||| ||||| ||||| |
|
|
| T |
3729037 |
cttgttgttgttgttctgccgagtaggctta-ggggggctacctcggctacaacaatctgtttccctcg |
3729104 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 60062 - 59947
Alignment:
| Q |
62 |
aaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgttgttg |
161 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
60062 |
aaccctctgagtggtagtaacagtcgaagcaaccggaatcggaagccatgtacaagtgcta-cattggccgacgttgatgcacccacatcattgttgttg |
59964 |
T |
 |
| Q |
162 |
tagctctgccgagtagg |
178 |
Q |
| |
|
| | ||||||| ||||| |
|
|
| T |
59963 |
ttgttctgccgtgtagg |
59947 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 13735085 - 13734974
Alignment:
| Q |
129 |
gccgacgttgaagcacccacatcattgttgttgtagctctgccgagtaggtttatgaggggctgcctcggctacagcaaattgttttcctcgttcatgct |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
13735085 |
gccgacgttgaagcacccacatcattgttgttgctgctctgccgagtaggcttatgagggcctgcctcggctacaacaaattgttttcctcgttcatact |
13734986 |
T |
 |
| Q |
229 |
tgctctgtggtg |
240 |
Q |
| |
|
||| || ||||| |
|
|
| T |
13734985 |
tgccctttggtg |
13734974 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 11776643 - 11776728
Alignment:
| Q |
72 |
gtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||| ||| || ||||||||| ||||||||||||| ||||||| ||| ||||||||||| | ||||| | |||||||||||| |
|
|
| T |
11776643 |
gtggtagcaactgttgaagcaaccagaaccggaacccacgtccaagcgcttccattggccgaaatggaagctcacacatcattgtt |
11776728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 14977388 - 14977294
Alignment:
| Q |
60 |
ggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcatt |
154 |
Q |
| |
|
||||| ||||||| |||||||| ||||||| || ||||||||||||||| || ||||| || |||||||| || || ||||| ||| ||||||| |
|
|
| T |
14977388 |
ggaactctctgagaggtagtaattgtcgaagtaatcggaaccggaacccaagtacaagtactgccattggctgaagtggaagctcccccatcatt |
14977294 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 11724442 - 11724269
Alignment:
| Q |
57 |
accggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgt |
156 |
Q |
| |
|
|||||||||| |||||||||| |||| || ||||||| |||| | | |||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
11724442 |
accggaacccgctgagtggtaataaccgttgaagcaaacggagctgtaacccatgtccaagtgctgccattagccgacgtggaagcacccacatcattgt |
11724343 |
T |
 |
| Q |
157 |
tgttgtagctctgccgagtaggtttatgaggggctgcctcggctacagcaaattgttttcctcgttcatgcttg |
230 |
Q |
| |
|
|||||||| ||| ||||||||| || ||||| ||||||||| ||| ||| |||||| ||||| |||| |||| |
|
|
| T |
11724342 |
tgttgtagttctaccgagtaggcttggtaggggatgcctcggccacaacaatttgtttccctcgatcattcttg |
11724269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 5782352 - 5782446
Alignment:
| Q |
63 |
accctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||| ||||||| ||| || ||||||||||||||||||||||| ||| ||| ||| ||||||||||| || ||||| |||||||||||||| |
|
|
| T |
5782352 |
accctcttggtggtagaaactgttgaagcaaccggaaccggaacccacgtcgaagcgcttccattggccgaagtagaagctcccacatcattgtt |
5782446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 8668242 - 8668342
Alignment:
| Q |
57 |
accggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgt |
156 |
Q |
| |
|
||||||| ||||||||||||||||| || |||||||||||| | |||||||| || |||||||||||||| ||||| || ||||||| ||||||||||| |
|
|
| T |
8668242 |
accggaattctctgagtggtagtaactgttgaagcaaccggagctggaacccacgtacaagtgctaccattagccgaagtggaagcacgcacatcattgt |
8668341 |
T |
 |
| Q |
157 |
t |
157 |
Q |
| |
|
| |
|
|
| T |
8668342 |
t |
8668342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 34511025 - 34510933
Alignment:
| Q |
63 |
accctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattg |
155 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | | ||||||||||| | | || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
34511025 |
accctctgagtggtagtaacagtcgaaacaaccagtattggaacccatgtaccattgttaccattggccgacgtcgaagcacccacatcattg |
34510933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 10425025 - 10425113
Alignment:
| Q |
69 |
tgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
|||||||| ||||| || ||||||||||| ||||||||||| ||||||||||||||| ||||||| || ||||||||| |||||||||| |
|
|
| T |
10425025 |
tgagtggttgtaactgttgaagcaaccgggaccggaacccacgtccaagtgctaccaatggccgaagtggaagcacccgcatcattgtt |
10425113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 1625258 - 1625346
Alignment:
| Q |
69 |
tgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
|||||||| ||||| || ||||||||||||| ||||||||||||||||| |||||||||| || || ||||||||||| |||||||| |
|
|
| T |
1625258 |
tgagtggtggtaactgttgaagcaaccggaattggaacccatgtccaagttataccattggctgaagtagaagcacccacgtcattgtt |
1625346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 13310695 - 13310793
Alignment:
| Q |
57 |
accggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattg |
155 |
Q |
| |
|
||||| ||||| |||||||||| || | ||||| ||||||| | ||||||||||| | | || |||||||||| || || ||||||||||||||||| |
|
|
| T |
13310695 |
accggtaccctttgagtggtagcaatactcgaaacaaccggtattggaacccatgtaccattgttaccattggctgatgtcaaagcacccacatcattg |
13310793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 11780566 - 11780651
Alignment:
| Q |
57 |
accggaaccctctgagtggtagtaacagtcgaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagc |
142 |
Q |
| |
|
|||||||| ||||||| || || || ||||||| || ||||||||||||| | |||||||| || ||||||||||| || ||||| |
|
|
| T |
11780566 |
accggaactctctgagaagtggtgactgtcgaagtaatcggaaccggaacctaagtccaagtacttccattggccgaagtggaagc |
11780651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 16311354 - 16311284
Alignment:
| Q |
87 |
gaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||| | ||||||||||||| |
|
|
| T |
16311354 |
gaagcaaccgggaccggaacccacgtccaggtgctaccattggccgaagtggaagtagccacatcattgtt |
16311284 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 16313759 - 16313689
Alignment:
| Q |
87 |
gaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||||| ||||||||||| ||| | ||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
16313759 |
gaagcaaccgggaccggaacccacgtcaaggtgctaccattggccgaaatggaagcacccacatcattgtt |
16313689 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 18488138 - 18488068
Alignment:
| Q |
87 |
gaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||| | ||||||||||||| |
|
|
| T |
18488138 |
gaagcaaccgggaccggaacccacgtccaggtgctaccattggccgaagtggaagtagccacatcattgtt |
18488068 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 18492348 - 18492278
Alignment:
| Q |
87 |
gaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||| | ||||||||||||| |
|
|
| T |
18492348 |
gaagcaaccgggaccggaacccacgtccaggtgctaccattggccgaagtggaagtagccacatcattgtt |
18492278 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 18494753 - 18494683
Alignment:
| Q |
87 |
gaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||||| ||||||||||| ||| | ||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
18494753 |
gaagcaaccgggaccggaacccacgtcaaggtgctaccattggccgaaatggaagcacccacatcattgtt |
18494683 |
T |
 |
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Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 19829460 - 19829530
Alignment:
| Q |
87 |
gaagcaaccggaaccggaacccatgtccaagtgctaccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||| |||||||||||||||| ||| ||| ||||||| || || ||||| |||||||||||||| |
|
|
| T |
19829460 |
gaagcaaccataaccggaacccatgtcaaagcgcttgcattggctgaagtggaagctcccacatcattgtt |
19829530 |
T |
 |
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Target: scaffold0093 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0093
Description:
Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 10797 - 10761
Alignment:
| Q |
121 |
taccattggccgacgttgaagcacccacatcattgtt |
157 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
10797 |
taccattggccgatgttgaagcacccacatcaatgtt |
10761 |
T |
 |
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