View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2449_high_5 (Length: 314)
Name: NF2449_high_5
Description: NF2449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2449_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 34166848 - 34167152
Alignment:
| Q |
1 |
tgcaagagtctggaacttttagctctacactgggagagtatgtccaacttatgaatttttagctaattaaactttccaatgacgtaatttatttcttgag |
100 |
Q |
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| T |
34166848 |
tgcaagagtctggaacttttagctctacactgggagagtatgtccaacttatgaatttttagctaattaaactttccaatgacgtaatttatttcttgag |
34166947 |
T |
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| Q |
101 |
tgaaattagaaggttgtcgtgatcctactagagaaatggactnnnnnnnngcttataaagggtagacaatcctcagcatttaagccagtttgtcggggac |
200 |
Q |
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| T |
34166948 |
tgaaattagaaggttgtcgtgatcctactagagaaatggactaaaaaaaagcttataaagggtagacaatcctcagcatttaagccagtttgtcggggac |
34167047 |
T |
|
| Q |
201 |
gacttagactcaaacctaggatgatattataacctgataaatgtgnnnnnnnnacccatcagtaaaggtacaaactaaaatgttgcgtcctaggcatgat |
300 |
Q |
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| T |
34167048 |
gacttagactcaaacctaggatgatattataacctgataaatgtgttttttttacccatcagtaaaggtacaaactaaaatgttgcgtcctaggcatgat |
34167147 |
T |
|
| Q |
301 |
gatgt |
305 |
Q |
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||||| |
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| T |
34167148 |
gatgt |
34167152 |
T |
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