View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2451_high_1 (Length: 532)
Name: NF2451_high_1
Description: NF2451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2451_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 10 - 517
Target Start/End: Original strand, 2081781 - 2082282
Alignment:
| Q |
10 |
acatcatcaactatgcatgatcaaatcatgctccattgagaaagtatgaataaactcaagtactcaacccatgatattataatgtcaatgtattacgcct |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2081781 |
acatcatcaactatgcatgatcaaatcatgctccattgagaaagtatgaataaactcaagtactcaacccatgatattataatgtcaatgtattacgcct |
2081880 |
T |
|
| Q |
110 |
tacgcccttgtgctcttatctacttttatgttgtaataagacaacatgccaccttaaacttgtaaagttattttatttatttctcaattctccaaactga |
209 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2081881 |
tacgcccttgagctcttatctacttttatgttgtaataagacaacatgccaccttaaacttgtaaagttattttatttatttctcaattctccaaactga |
2081980 |
T |
|
| Q |
210 |
ctaacatttttctcnnnnnnnnnnnnnggaggaaacgagtgaccttactcttctgggcacgacggatctgaattggctatggaaccttctactacttcaa |
309 |
Q |
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|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2081981 |
ctaacatttttctcaaaaaa-------ggaagaaacgagtgaccttactcttctgggcacgacggatctgaattggctatggaaccttctactacttcaa |
2082073 |
T |
|
| Q |
310 |
taggcggaagtattgcatgcattccacgtgccattatggttttagcagttccacgccttcctgatatagcaatccctccaatcctagggtcagtagcccc |
409 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2082074 |
taggcggaagtattgcgtgcattccacgtgccattatggttttagcagttccacgccttcctgatatagcaatccctccaatcctagggtcagtagcccc |
2082173 |
T |
|
| Q |
410 |
aagtaaaagagcagttttaatagcatcctgcattacaacaacaatttgcaaaattcatcctttaatttaatagaagcc-aaaaaatcaactcacattcgc |
508 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2082174 |
aagtaaaagagcagttttaatagcatcctgcattacaacaacaatttgcaaaattcatcctttaatttaatagaagccaaaaaaatcaactcacattcgc |
2082273 |
T |
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| Q |
509 |
ataattaat |
517 |
Q |
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||||||||| |
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| T |
2082274 |
ataattaat |
2082282 |
T |
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