View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2451_low_4 (Length: 419)

Name: NF2451_low_4
Description: NF2451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2451_low_4
NF2451_low_4
[»] chr8 (55 HSPs)
chr8 (18-196)||(3050880-3051058)
chr8 (262-414)||(3051124-3051276)
chr8 (282-407)||(9054785-9054910)
chr8 (266-407)||(6813691-6813833)
chr8 (268-404)||(23799527-23799664)
chr8 (302-404)||(6127265-6127368)
chr8 (316-407)||(7493121-7493212)
chr8 (67-191)||(3303474-3303596)
chr8 (268-404)||(5702433-5702570)
chr8 (268-404)||(26403180-26403317)
chr8 (62-191)||(43036665-43036792)
chr8 (331-404)||(30291620-30291695)
chr8 (58-194)||(12702426-12702562)
chr8 (265-403)||(28307568-28307707)
chr8 (63-187)||(5689513-5689635)
chr8 (274-413)||(19752335-19752475)
chr8 (268-403)||(7412351-7412486)
chr8 (300-407)||(5990509-5990615)
chr8 (274-357)||(19175753-19175835)
chr8 (294-403)||(4456064-4456173)
chr8 (150-191)||(40321318-40321359)
chr8 (331-404)||(1292543-1292617)
chr8 (331-404)||(3303750-3303824)
chr8 (65-187)||(41366420-41366539)
chr8 (274-357)||(31071228-31071310)
chr8 (63-141)||(15213075-15213155)
chr8 (62-191)||(19491502-19491628)
chr8 (86-195)||(44304093-44304201)
chr8 (294-357)||(1261953-1262015)
chr8 (107-191)||(1345221-1345301)
chr8 (333-407)||(8863574-8863646)
chr8 (337-404)||(6598986-6599054)
chr8 (157-191)||(6599211-6599245)
chr8 (337-404)||(6674439-6674507)
chr8 (157-191)||(6674664-6674698)
chr8 (101-191)||(8154024-8154109)
chr8 (150-191)||(18142056-18142097)
chr8 (63-132)||(4743027-4743098)
chr8 (294-342)||(26287937-26287985)
chr8 (294-342)||(26301194-26301242)
chr8 (294-342)||(26313188-26313236)
chr8 (62-117)||(3231645-3231700)
chr8 (294-357)||(18853166-18853229)
chr8 (294-357)||(18870560-18870623)
chr8 (294-357)||(36979413-36979475)
chr8 (18-64)||(3063274-3063320)
chr8 (337-384)||(3772225-3772274)
chr8 (341-404)||(40328793-40328857)
chr8 (300-357)||(4760074-4760130)
chr8 (268-325)||(9765849-9765906)
chr8 (150-187)||(10015321-10015358)
chr8 (150-191)||(18105960-18106001)
chr8 (62-131)||(4731957-4732027)
chr8 (331-404)||(41364927-41365001)
chr8 (347-407)||(42093128-42093188)
[»] chr3 (69 HSPs)
chr3 (294-408)||(21353598-21353712)
chr3 (288-407)||(4386865-4386984)
chr3 (62-189)||(29196188-29196314)
chr3 (268-403)||(8370428-8370563)
chr3 (274-404)||(48438230-48438361)
chr3 (268-404)||(18552823-18552960)
chr3 (274-404)||(25795797-25795928)
chr3 (268-404)||(1736245-1736382)
chr3 (268-403)||(21711233-21711368)
chr3 (268-404)||(3715942-3716079)
chr3 (313-405)||(8126685-8126778)
chr3 (63-191)||(9666270-9666396)
chr3 (268-404)||(36029103-36029240)
chr3 (268-404)||(40592722-40592859)
chr3 (298-413)||(3328288-3328403)
chr3 (274-404)||(40844668-40844798)
chr3 (268-413)||(1417422-1417567)
chr3 (268-401)||(30709733-30709867)
chr3 (274-415)||(37466307-37466448)
chr3 (265-353)||(25929435-25929522)
chr3 (331-404)||(32891117-32891192)
chr3 (62-191)||(44700283-44700409)
chr3 (63-191)||(27305519-27305641)
chr3 (313-413)||(3323622-3323722)
chr3 (268-357)||(27974941-27975029)
chr3 (274-362)||(16264366-16264453)
chr3 (62-191)||(23391711-23391838)
chr3 (294-404)||(26299024-26299135)
chr3 (300-404)||(47923845-47923951)
chr3 (63-191)||(21350811-21350933)
chr3 (331-405)||(32744516-32744590)
chr3 (300-404)||(24695104-24695209)
chr3 (312-353)||(25929365-25929406)
chr3 (318-406)||(5366263-5366351)
chr3 (61-130)||(29813361-29813432)
chr3 (312-403)||(35925534-35925625)
chr3 (62-191)||(22834806-22834932)
chr3 (274-357)||(32143337-32143419)
chr3 (62-191)||(39153163-39153290)
chr3 (268-342)||(27986449-27986523)
chr3 (302-407)||(29100203-29100309)
chr3 (153-195)||(32744335-32744377)
chr3 (300-357)||(6794702-6794758)
chr3 (62-191)||(761087-761212)
chr3 (341-406)||(9666556-9666623)
chr3 (331-404)||(22835082-22835156)
chr3 (331-404)||(23391989-23392063)
chr3 (274-342)||(33386669-33386737)
chr3 (331-404)||(39153441-39153515)
chr3 (294-357)||(26928590-26928652)
chr3 (274-357)||(27452974-27453056)
chr3 (62-132)||(32891388-32891459)
chr3 (150-191)||(23410216-23410257)
chr3 (150-191)||(31314683-31314724)
chr3 (331-404)||(760861-760935)
chr3 (347-407)||(25517071-25517131)
chr3 (331-404)||(29196466-29196541)
chr3 (331-404)||(29682373-29682447)
chr3 (294-357)||(2671585-2671647)
chr3 (294-357)||(7167280-7167342)
chr3 (294-357)||(8477398-8477460)
chr3 (294-357)||(8739062-8739124)
chr3 (294-357)||(9091300-9091362)
chr3 (331-403)||(9581297-9581370)
chr3 (62-191)||(29811110-29811238)
chr3 (294-357)||(40372794-40372856)
chr3 (300-357)||(1305990-1306046)
chr3 (331-404)||(23410409-23410483)
chr3 (274-342)||(39039995-39040063)
[»] chr2 (64 HSPs)
chr2 (268-413)||(2837972-2838117)
chr2 (268-407)||(2869640-2869780)
chr2 (268-413)||(1345483-1345628)
chr2 (268-404)||(20522230-20522367)
chr2 (300-404)||(21629985-21630090)
chr2 (277-398)||(27149251-27149372)
chr2 (300-404)||(31056086-31056191)
chr2 (63-191)||(33162254-33162380)
chr2 (268-404)||(34682284-34682421)
chr2 (268-399)||(13569338-13569470)
chr2 (63-191)||(39285077-39285202)
chr2 (274-404)||(10445394-10445525)
chr2 (268-401)||(10707205-10707339)
chr2 (265-407)||(15903838-15903979)
chr2 (268-362)||(34388868-34388962)
chr2 (268-404)||(14698958-14699094)
chr2 (268-404)||(17865213-17865350)
chr2 (300-404)||(40014967-40015072)
chr2 (268-404)||(8040070-8040209)
chr2 (274-404)||(33118152-33118283)
chr2 (63-191)||(29868111-29868237)
chr2 (63-191)||(42362588-42362713)
chr2 (62-191)||(2838188-2838314)
chr2 (300-404)||(8390100-8390205)
chr2 (62-191)||(723546-723672)
chr2 (288-407)||(28770722-28770841)
chr2 (62-191)||(34139572-34139698)
chr2 (274-404)||(39482947-39483078)
chr2 (101-191)||(11067543-11067629)
chr2 (302-404)||(33528576-33528674)
chr2 (63-191)||(36773800-36773926)
chr2 (268-403)||(28259129-28259264)
chr2 (62-191)||(36317812-36317939)
chr2 (63-191)||(11151395-11151521)
chr2 (59-191)||(14633624-14633753)
chr2 (302-407)||(18674349-18674454)
chr2 (294-407)||(35397548-35397659)
chr2 (63-189)||(2334218-2334341)
chr2 (331-404)||(11151671-11151745)
chr2 (300-403)||(23078422-23078525)
chr2 (152-191)||(14202310-14202349)
chr2 (268-362)||(16940202-16940296)
chr2 (268-362)||(17010867-17010961)
chr2 (61-191)||(36987873-36988001)
chr2 (331-404)||(11690515-11690589)
chr2 (331-404)||(42362366-42362440)
chr2 (294-357)||(3491786-3491848)
chr2 (62-130)||(11690787-11690857)
chr2 (294-357)||(25398531-25398593)
chr2 (294-357)||(25403669-25403731)
chr2 (294-357)||(25407658-25407720)
chr2 (331-406)||(723824-723900)
chr2 (63-191)||(24885828-24885953)
chr2 (343-404)||(14202497-14202559)
chr2 (331-404)||(14633906-14633980)
chr2 (274-404)||(42039619-42039750)
chr2 (63-195)||(6594804-6594934)
chr2 (294-357)||(11098926-11098988)
chr2 (294-357)||(14291524-14291586)
chr2 (300-357)||(9296400-9296456)
chr2 (338-404)||(24885675-24885742)
chr2 (66-141)||(4561359-4561435)
chr2 (299-407)||(27139843-27139951)
chr2 (331-404)||(34139851-34139925)
[»] chr7 (55 HSPs)
chr7 (268-407)||(28617173-28617312)
chr7 (274-407)||(5817218-5817350)
chr7 (265-405)||(3047261-3047402)
chr7 (268-405)||(29159813-29159951)
chr7 (268-405)||(33332399-33332537)
chr7 (268-404)||(2647646-2647783)
chr7 (268-404)||(46516260-46516397)
chr7 (268-413)||(2580400-2580545)
chr7 (268-404)||(55958-56094)
chr7 (268-407)||(23402961-23403100)
chr7 (268-413)||(20284099-20284244)
chr7 (63-191)||(41317238-41317364)
chr7 (63-191)||(47675936-47676062)
chr7 (101-191)||(36146251-36146338)
chr7 (268-413)||(9189949-9190095)
chr7 (62-191)||(14069632-14069759)
chr7 (62-191)||(14379660-14379787)
chr7 (294-404)||(35960852-35960963)
chr7 (63-191)||(19502421-19502547)
chr7 (302-402)||(49091705-49091806)
chr7 (268-404)||(21983294-21983432)
chr7 (61-191)||(23555283-23555412)
chr7 (62-191)||(18126888-18127016)
chr7 (268-342)||(9185178-9185252)
chr7 (150-191)||(30024641-30024682)
chr7 (101-183)||(24525345-24525424)
chr7 (266-404)||(4796617-4796756)
chr7 (340-404)||(24525985-24526051)
chr7 (62-191)||(47673743-47673870)
chr7 (63-190)||(26417559-26417685)
chr7 (63-191)||(31105200-31105322)
chr7 (63-191)||(31519133-31519258)
chr7 (295-357)||(44848683-44848744)
chr7 (62-132)||(4586459-4586531)
chr7 (150-190)||(8153581-8153621)
chr7 (96-191)||(495822-495913)
chr7 (86-195)||(23564893-23564995)
chr7 (63-191)||(38671025-38671150)
chr7 (300-357)||(18413681-18413737)
chr7 (342-413)||(9235524-9235596)
chr7 (331-404)||(38671302-38671376)
chr7 (331-406)||(41649091-41649166)
chr7 (294-357)||(1533443-1533505)
chr7 (294-357)||(2058001-2058063)
chr7 (303-401)||(2479381-2479479)
chr7 (294-357)||(18408799-18408861)
chr7 (294-357)||(21639844-21639906)
chr7 (268-357)||(21988918-21989006)
chr7 (67-191)||(43864486-43864609)
chr7 (63-191)||(1113895-1114021)
chr7 (101-187)||(29991299-29991382)
chr7 (331-404)||(3259009-3259083)
chr7 (335-404)||(25615867-25615937)
chr7 (63-132)||(31732768-31732839)
chr7 (64-141)||(48489720-48489798)
[»] chr6 (30 HSPs)
chr6 (274-413)||(14521690-14521828)
chr6 (282-405)||(31076891-31077014)
chr6 (268-404)||(10077115-10077252)
chr6 (268-404)||(5572191-5572328)
chr6 (294-404)||(21801294-21801405)
chr6 (268-405)||(31979523-31979661)
chr6 (300-404)||(31086423-31086528)
chr6 (275-404)||(18232862-18232992)
chr6 (265-405)||(24435920-24436061)
chr6 (268-403)||(5757430-5757565)
chr6 (62-191)||(14521477-14521607)
chr6 (302-404)||(4629998-4630101)
chr6 (275-405)||(27165700-27165831)
chr6 (268-357)||(21356046-21356134)
chr6 (300-405)||(22963741-22963846)
chr6 (300-405)||(23824547-23824652)
chr6 (101-187)||(3038766-3038849)
chr6 (300-407)||(1115052-1115159)
chr6 (347-404)||(16569047-16569106)
chr6 (151-191)||(33160236-33160276)
chr6 (346-405)||(99244-99303)
chr6 (318-407)||(30518076-30518165)
chr6 (294-342)||(22709054-22709102)
chr6 (274-342)||(31936603-31936671)
chr6 (101-132)||(5406042-5406073)
chr6 (101-132)||(5410367-5410398)
chr6 (294-357)||(5674769-5674831)
chr6 (337-404)||(28137494-28137562)
chr6 (150-191)||(33211074-33211115)
chr6 (341-406)||(22424917-22424983)
[»] chr1 (62 HSPs)
chr1 (266-405)||(17345469-17345607)
chr1 (268-404)||(19072938-19073075)
chr1 (268-404)||(19120828-19120965)
chr1 (265-407)||(22819435-22819578)
chr1 (311-407)||(9023787-9023883)
chr1 (268-404)||(47703886-47704023)
chr1 (274-404)||(16124466-16124597)
chr1 (63-191)||(13137780-13137906)
chr1 (274-362)||(27104365-27104453)
chr1 (268-404)||(13598408-13598545)
chr1 (268-404)||(29651821-29651958)
chr1 (63-191)||(45644158-45644284)
chr1 (268-404)||(47098775-47098911)
chr1 (62-191)||(28223220-28223347)
chr1 (268-404)||(9476271-9476408)
chr1 (268-403)||(3281718-3281853)
chr1 (268-403)||(26644849-26644984)
chr1 (62-191)||(28220025-28220152)
chr1 (336-407)||(35109485-35109556)
chr1 (63-191)||(196710-196835)
chr1 (63-191)||(1833751-1833876)
chr1 (274-413)||(32889455-32889595)
chr1 (101-191)||(50167019-50167105)
chr1 (64-190)||(30476247-30476371)
chr1 (268-343)||(775682-775757)
chr1 (62-191)||(4552447-4552574)
chr1 (62-187)||(23555070-23555192)
chr1 (297-407)||(918428-918538)
chr1 (297-407)||(11032268-11032378)
chr1 (294-399)||(21536525-21536630)
chr1 (63-189)||(833970-834093)
chr1 (331-404)||(8550867-8550941)
chr1 (331-404)||(45644434-45644509)
chr1 (288-407)||(32736944-32737063)
chr1 (62-187)||(40122000-40122122)
chr1 (151-190)||(46065156-46065195)
chr1 (63-191)||(28265359-28265484)
chr1 (331-406)||(40122278-40122354)
chr1 (62-191)||(41361153-41361279)
chr1 (62-191)||(8550583-8550710)
chr1 (268-360)||(47102837-47102928)
chr1 (294-357)||(24202768-24202830)
chr1 (62-191)||(31659480-31659607)
chr1 (325-403)||(40816765-40816844)
chr1 (312-395)||(48382441-48382524)
chr1 (101-187)||(3846960-3847045)
chr1 (333-407)||(10997031-10997105)
chr1 (62-141)||(37559663-37559744)
chr1 (300-357)||(13604622-13604678)
chr1 (300-357)||(19358842-19358898)
chr1 (300-357)||(19361431-19361487)
chr1 (300-357)||(19380071-19380127)
chr1 (150-191)||(50169099-50169140)
chr1 (63-141)||(927785-927862)
chr1 (157-191)||(3189573-3189607)
chr1 (157-191)||(3198390-3198424)
chr1 (157-191)||(3207229-3207263)
chr1 (318-384)||(8281378-8281444)
chr1 (331-404)||(196988-197062)
chr1 (331-404)||(834247-834321)
chr1 (153-189)||(16455861-16455897)
chr1 (331-384)||(46064951-46065006)
[»] chr5 (45 HSPs)
chr5 (265-404)||(11181782-11181923)
chr5 (274-407)||(33030888-33031021)
chr5 (268-404)||(10281761-10281898)
chr5 (293-407)||(6741887-6742001)
chr5 (63-191)||(28750455-28750581)
chr5 (268-413)||(42127352-42127497)
chr5 (300-397)||(7160861-7160958)
chr5 (302-404)||(3880343-3880446)
chr5 (274-413)||(28832275-28832412)
chr5 (302-403)||(12084127-12084228)
chr5 (274-407)||(2630247-2630380)
chr5 (63-191)||(13488443-13488569)
chr5 (268-357)||(9353331-9353419)
chr5 (268-404)||(11916922-11917059)
chr5 (300-404)||(19588788-19588893)
chr5 (268-357)||(36932349-36932437)
chr5 (65-191)||(538263-538387)
chr5 (268-403)||(17003911-17004047)
chr5 (77-191)||(42428244-42428356)
chr5 (62-191)||(5887234-5887360)
chr5 (62-191)||(42426034-42426161)
chr5 (60-191)||(30682719-30682849)
chr5 (62-191)||(31183216-31183342)
chr5 (101-191)||(13239994-13240080)
chr5 (268-357)||(15464542-15464630)
chr5 (268-403)||(14520240-14520375)
chr5 (65-191)||(32637066-32637190)
chr5 (62-179)||(534013-534128)
chr5 (331-406)||(33831692-33831768)
chr5 (101-191)||(16649674-16649760)
chr5 (150-191)||(37439384-37439425)
chr5 (150-191)||(42927135-42927176)
chr5 (294-357)||(38192209-38192271)
chr5 (294-357)||(38219434-38219496)
chr5 (300-362)||(24553501-24553561)
chr5 (268-357)||(31300595-31300683)
chr5 (331-404)||(5887496-5887570)
chr5 (156-191)||(8565841-8565876)
chr5 (336-404)||(8566031-8566100)
chr5 (294-357)||(24135884-24135946)
chr5 (301-344)||(28537669-28537712)
chr5 (63-195)||(39468348-39468479)
chr5 (62-141)||(3075548-3075629)
chr5 (101-191)||(33831921-33832007)
chr5 (371-407)||(3651613-3651649)
[»] chr4 (50 HSPs)
chr4 (265-404)||(39774255-39774395)
chr4 (265-396)||(1983259-1983390)
chr4 (283-404)||(18377384-18377506)
chr4 (268-404)||(10047389-10047526)
chr4 (268-404)||(16623243-16623380)
chr4 (301-407)||(37781905-37782011)
chr4 (268-403)||(36315181-36315316)
chr4 (268-403)||(36329390-36329525)
chr4 (265-405)||(5112244-5112384)
chr4 (268-403)||(5396623-5396758)
chr4 (63-191)||(26175436-26175562)
chr4 (300-404)||(3796469-3796574)
chr4 (268-404)||(38152389-38152526)
chr4 (62-191)||(5872060-5872184)
chr4 (294-362)||(16630673-16630741)
chr4 (301-404)||(42599523-42599626)
chr4 (293-356)||(34495822-34495885)
chr4 (62-191)||(46147194-46147321)
chr4 (268-362)||(3777559-3777652)
chr4 (63-187)||(36463196-36463317)
chr4 (268-358)||(39246004-39246094)
chr4 (62-183)||(45686986-45687105)
chr4 (300-404)||(6743366-6743470)
chr4 (62-191)||(12743727-12743851)
chr4 (274-404)||(24333825-24333957)
chr4 (150-191)||(36994761-36994802)
chr4 (347-407)||(34670613-34670673)
chr4 (63-188)||(48893443-48893565)
chr4 (62-132)||(5350199-5350269)
chr4 (62-188)||(12739352-12739473)
chr4 (63-196)||(31474384-31474512)
chr4 (268-357)||(31985633-31985720)
chr4 (60-191)||(47038213-47038341)
chr4 (268-404)||(54867194-54867330)
chr4 (294-342)||(28468542-28468590)
chr4 (336-404)||(45687267-45687337)
chr4 (62-167)||(4588218-4588321)
chr4 (331-406)||(5871832-5871908)
chr4 (268-404)||(5147687-5147824)
chr4 (150-191)||(29254736-29254777)
chr4 (302-406)||(873467-873571)
chr4 (274-342)||(5269204-5269272)
chr4 (62-191)||(9927257-9927385)
chr4 (65-129)||(53345480-53345544)
chr4 (102-196)||(6542027-6542114)
chr4 (294-357)||(24741976-24742038)
chr4 (294-357)||(29760677-29760739)
chr4 (62-141)||(52082462-52082542)
chr4 (311-407)||(18912311-18912407)
chr4 (293-361)||(39593764-39593831)
[»] scaffold0148 (1 HSPs)
scaffold0148 (268-361)||(10739-10832)
[»] scaffold0006 (3 HSPs)
scaffold0006 (268-404)||(5693-5830)
scaffold0006 (268-404)||(2502-2639)
scaffold0006 (300-357)||(133279-133335)
[»] scaffold0036 (1 HSPs)
scaffold0036 (268-404)||(85693-85829)
[»] scaffold0140 (1 HSPs)
scaffold0140 (268-357)||(8418-8506)
[»] scaffold0087 (2 HSPs)
scaffold0087 (268-403)||(43913-44048)
scaffold0087 (268-403)||(36784-36919)
[»] scaffold0176 (1 HSPs)
scaffold0176 (302-404)||(17307-17410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (296-407)||(102442-102553)
[»] scaffold0188 (2 HSPs)
scaffold0188 (294-357)||(17951-18013)
scaffold0188 (294-357)||(24044-24106)
[»] scaffold0076 (1 HSPs)
scaffold0076 (268-406)||(15937-16075)
[»] scaffold0184 (1 HSPs)
scaffold0184 (282-342)||(29506-29566)
[»] scaffold0078 (1 HSPs)
scaffold0078 (282-342)||(43278-43338)
[»] scaffold0236 (1 HSPs)
scaffold0236 (347-393)||(10515-10561)
[»] scaffold0219 (1 HSPs)
scaffold0219 (62-98)||(27249-27285)
[»] scaffold0098 (1 HSPs)
scaffold0098 (294-334)||(45289-45329)


Alignment Details
Target: chr8 (Bit Score: 179; Significance: 2e-96; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 3050880 - 3051058
Alignment:
Q  18 attatctcttctcacttttaagaaagccttagaaccattaacagttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3050880 attatctcttctcacttttaagaaagccttagaaccattaacagttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaa 3050979  T
Q  118 gaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctagaaatt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3050980 gaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctagaaatt 3051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 262 - 414
Target Start/End: Original strand, 3051124 - 3051276
Alignment:
Q  262 ttagtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051124 ttagtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 3051223  T
Q  362 cataagagctcacaaagaacaaaacttaatttctacccatttttcatctcact 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3051224 cataagagctcacaaagaacaaaacttaatttctacccatttttcatgtcact 3051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 282 - 407
Target Start/End: Complemental strand, 9054910 - 9054785
Alignment:
Q  282 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaac 381  Q
    ||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||   |||||||||||||||| ||| ||| ||||||||||    
T  9054910 aatatgacctactctggaggagagagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaattagcttaaaagcgcacaaagaac 9054811  T
Q  382 aaaacttaatttctacccatttttca 407  Q
    ||||  ||||||||||||||||||||    
T  9054810 aaaatctaatttctacccatttttca 9054785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 266 - 407
Target Start/End: Original strand, 6813691 - 6813833
Alignment:
Q  266 taacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcata 365  Q
    ||||||| ||||||| |||||||||| | || | |||||||||| |||||||||||| |||||||||||||| ||||| | |||||||||||||||| |     
T  6813691 taacccagttcggtccaatataacctacactaggggagagagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaattagcttg 6813790  T
Q  366 agagctcacaaagaacaaaacttaa-tttctacccatttttca 407  Q
      ||||||||||||||||||| ||| |||||||||||||||||    
T  6813791 caagctcacaaagaacaaaacctaattttctacccatttttca 6813833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 23799664 - 23799527
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | |||||||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  23799664 acccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 23799565  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  23799564 agcttacacaagaacaagacctaatttctacccatttt 23799527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 6127265 - 6127368
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctaccca 400  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| || ||||||||| || |||||||||||||    
T  6127265 agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctaccca 6127364  T
Q  401 tttt 404  Q
    ||||    
T  6127365 tttt 6127368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 407
Target Start/End: Complemental strand, 7493212 - 7493121
Alignment:
Q  316 caatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||| ||||| |||||||| |||||||||| |||||||||||  |||||||    
T  7493212 caatccactaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcacacagaacaaaacctaatttctacctgtttttca 7493121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 3303474 - 3303596
Alignment:
Q  67 gtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaa 164  Q
    ||||||| |||||||||||||||||||||  |||  ||||||||||||| |||| ||||| |||||||  ||||    || ||| |||||||||||||||    
T  3303474 gtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaaccaatatca----aaacaaacacaagcaacaacaa 3303569  T
Q  165 taataacaacacctagatctaatctag 191  Q
    ||||||| |||||||||||||||||||    
T  3303570 taataactacacctagatctaatctag 3303596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 5702570 - 5702433
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| | ||||||||| ||| |||||||||| |||||| |||||||||||||||||| ||      
T  5702570 acccagttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaaattagcttata 5702471  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||| |||||| |||||||||||||||||    
T  5702470 agcttacacaagagcaaaacctaatttctacccatttt 5702433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 26403317 - 26403180
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||| | ||||||||| ||      
T  26403317 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttataggaaattagcttaca 26403218  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    ||||  || |||||||| || |||||||||||||||||    
T  26403217 agcttgcacaagaacaagacctaatttctacccatttt 26403180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 43036792 - 43036665
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    ||||| |||||| ||||||||| ||||||||||||  || |||||||||||||| |||| |||||||||||||   |||    ||| || ||||||||||    
T  43036792 ttgttatgaatttggactcaaaactcacaccaatacaaaaaatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcaac 43036697  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    |||||||| |||| ||||||||||||||||||    
T  43036696 aacaataacaacaccacctagatctaatctag 43036665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 30291695 - 30291620
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||||||||||||||||||||||||||||| | |   ||||||||||||||||||| |||||||||||||||||    
T  30291695 aaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccatttt 30291620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 12702426 - 12702562
Alignment:
Q  58 acagttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaag 155  Q
    |||||||||||||||| |||||||||  ||||| ||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||    
T  12702426 acagttgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaag 12702520  T
Q  156 caacaacaataataaca---acacctagatctaatctagaaa 194  Q
    |||||||||||||||||   ||||||||||||||||||||||    
T  12702521 caacaacaataataacaacgacacctagatctaatctagaaa 12702562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 403
Target Start/End: Original strand, 28307568 - 28307707
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag-ca 363  Q
    |||||||| ||||||| || || |||| |||||| |  ||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||||||||       
T  28307568 gtaacccagttcggtccaaaatgacctactctggggatgagagcagctctccaatccactaagatggaagtaatacacatgggttacaagaaattagttt 28307667  T
Q  364 taagagctcacaaagaacaaaacttaatttctacccattt 403  Q
    ||| |||||| ||||||||| || || ||||||| |||||    
T  28307668 taaaagctcataaagaacaagacctactttctacacattt 28307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 5689635 - 5689513
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||||||||  ||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||    
T  5689635 tgttgtgaattccgactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaaca 5689540  T
Q  161 acaataataacaacacctagatctaat 187  Q
    ||||||||||||||| ||| |||||||    
T  5689539 acaataataacaacatctaaatctaat 5689513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 413
Target Start/End: Complemental strand, 19752475 - 19752335
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcataagagctc 372  Q
    ||||||| ||||| ||||  ||| | |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |   ||||     
T  19752475 ttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagctt 19752377  T
Q  373 aca-aagaacaaaacttaatttctacccatttttcatctcac 413  Q
    ||| ||||||||  | ||||||||||||||||||||| ||||    
T  19752376 acacaagaacaagtcctaatttctacccatttttcatatcac 19752335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 403
Target Start/End: Original strand, 7412351 - 7412486
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| || | |       
T  7412351 acccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaataacttgca 7412449  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  7412450 agcttacacaagaacaagacctaatttctacccattt 7412486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 407
Target Start/End: Complemental strand, 5990615 - 5990509
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 399  Q
    |||||||||  |||||||||  ||||||||||||||||||||||   |||||||||||||||| ||| |||||||||||||||  || | ||||  ||||    
T  5990615 ggagagagcggctctccaatt-actaagatgaaagtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcaccc 5990517  T
Q  400 atttttca 407  Q
    ||||||||    
T  5990516 atttttca 5990509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 19175835 - 19175753
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  19175835 ttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 19175753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 4456064 - 4456173
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatt 392  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||     |||| ||| |||||||| || |||||    
T  4456064 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagctggcaagcttacacaagaacaagacataatt 4456162  T
Q  393 tctacccattt 403  Q
    |||||||||||    
T  4456163 tctacccattt 4456173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 40321359 - 40321318
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40321359 cacaagcaacaacaataataacaacacctagatctaatctag 40321318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 1292543 - 1292617
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| ||||||||||||||||||||||||||| | |   ||||||||||||||||| |||||||||||||||||||    
T  1292543 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cttaatttctacccatttt 1292617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 3303750 - 3303824
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| ||||||||||||||||||||||||||  |||   |||||||||||||| ||||||||||||||||||||||    
T  3303750 aaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaac-aaacttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 41366420 - 41366539
Alignment:
Q  65 ttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 162  Q
    ||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||||| |||    
T  41366420 ttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaataac 41366514  T
Q  163 aataataacaacacctagatctaat 187  Q
    || ||||||||||||||||||||||    
T  41366515 aacaataacaacacctagatctaat 41366539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 31071310 - 31071228
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  31071310 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 31071228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 15213155 - 15213075
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 141  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  |||||||    
T  15213155 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 15213075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 19491502 - 19491628
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||||||||| ||||||||| |||  |||||| |||  ||||||||||||| |||| |||||| ||| ||  ||||    ||| || |||||| ||||    
T  19491502 ttgttgtgaattcggactcaaaactctaaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaatatca----aagtaaacacaagtaaca 19491597  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||| |||||||||||||| |||||||||||    
T  19491598 acaacaataacaacacctatatctaatctag 19491628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 44304201 - 44304093
Alignment:
Q  86 tcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa-caataataacaacacctagat 182  Q
    ||||||||||| |||  ||||||||||||| |||| |||||||||||||  || ||||  ||||    ||||||| || ||| |||||||||||||||||    
T  44304201 tcacaccaatacatactatgatgtgtggagcaaaggaaagtagtaaccaatattaaagtgagca----caagcaataatcaacaataacaacacctagat 44304106  T
Q  183 ctaatctagaaat 195  Q
    |||||||||||||    
T  44304105 ctaatctagaaat 44304093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 1262015 - 1261953
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  1262015 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 1261953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 1345221 - 1345301
Alignment:
Q  107 tgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||| |||| |||||||||||||  ||||    ||| || ||||| ||||||||||||||| ||||||||||||||||||||    
T  1345221 tgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaaacaacaacaataataataacacctagatctaatctag 1345301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 8863646 - 8863574
Alignment:
Q  333 agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||||||||||   |||||||||||||| | ||| ||||||||  ||||||| ||||||||||||||||||||||    
T  8863646 agtgatacaaagaggttacaagaaattaacttaaaagctcaca--gaacaaaccttaatttctacccatttttca 8863574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 6599054 - 6598986
Alignment:
Q  337 atacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||| |||||||||||||||| |||   ||||| ||||||||||| |||||||||||||||||||    
T  6599054 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccatttt 6598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 6599245 - 6599211
Alignment:
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||||||    
T  6599245 aacaacaataataacaacacctagatctaatctag 6599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 6674507 - 6674439
Alignment:
Q  337 atacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||| |||||||||||||||| |||   ||||| ||||||||||| |||||||||||||||||||    
T  6674507 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccatttt 6674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 6674698 - 6674664
Alignment:
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||||||    
T  6674698 aacaacaataataacaacacctagatctaatctag 6674664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 8154109 - 8154024
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||| ||||||| |||||||||| ||  ||||||| || ||    |||||||||||||||||||||| |||||||| ||||||||    
T  8154109 atgatgtgtgaagtaaaggaaagtagtaatcaatatcaaagtaacca----caagcaacaacaataataacaa-acctagatgtaatctag 8154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 18142097 - 18142056
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  18142097 cacaagcaacaataataataacaacacctacatctaatctag 18142056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 4743027 - 4743098
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaacca 132  Q
    ||||||||||| |||||||||||||||||||||  |||  || |||||||||| |||| ||||| |||||||    
T  4743027 tgttgtgaattcggactcaaatctcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaacca 4743098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 26287937 - 26287985
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26287937 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 26301194 - 26301242
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26301194 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 26313188 - 26313236
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26313188 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 3231645 - 3231700
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaa 117  Q
    |||||||||||| |||||| |||||||||||||||||    |||||||||||||||    
T  3231645 ttgttgtgaattcggactctaatctcacaccaataaacttggatgtgtggagtaaa 3231700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 18853229 - 18853166
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| ||  ||||||||| |||||| | |||||||||||    
T  18853229 tctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaa 18853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 18870623 - 18870560
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| ||  ||||||||| |||||| | |||||||||||    
T  18870623 tctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaa 18870560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 36979413 - 36979475
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  36979413 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 36979475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 3063274 - 3063320
Alignment:
Q  18 attatctcttctcacttttaagaaagccttagaaccattaacagttg 64  Q
    ||||||| |||||||||| ||||||||||||| |||||||| |||||    
T  3063274 attatcttttctcactttcaagaaagccttagcaccattaagagttg 3063320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 3772274 - 3772225
Alignment:
Q  337 atacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaa 384  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||    
T  3772274 atacaaatgagttacaagaaattagcttaaataagctcacaaagaacaaa 3772225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 404
Target Start/End: Complemental strand, 40328857 - 40328793
Alignment:
Q  341 aaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||||||||||||||||||  |||   |||||||||||||| |||| |||||||||||||||||    
T  40328857 aaatgagttacaagaaattagtttaaacaagctcacaaagaac-aaacctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 4760130 - 4760074
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  4760130 ggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 4760074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 9765906 - 9765849
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccacta 325  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||    
T  9765906 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacta 9765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 10015358 - 10015321
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaat 187  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  10015358 cacaagcaaaaacaataataacaatacctagatctaat 10015321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 18105960 - 18106001
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||    
T  18105960 cacaagcaataacaacaataacatcacctagatctaatctag 18106001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 4732027 - 4731957
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaacc 131  Q
    |||||||||||| | |||||||  |||||||||||  || |||||||||||||| |||| ||||||||||||    
T  4732027 ttgttgtgaattcgaactcaaaa-tcacaccaatacaaacaatgatgtgtggagcaaaggaaagtagtaacc 4731957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 41364927 - 41365001
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   | |||||||||||| |||| ||||||||||| |||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaac-aaacctaatttctaccaatttt 41365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 42093188 - 42093128
Alignment:
Q  347 gttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||||||||||||||| ||  | ||||||||||||| | | ||||||||||| ||||||||    
T  42093188 gttacaagaaattagcttacaaactcacaaagaacatatcataatttctacctatttttca 42093128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 294 - 408
Target Start/End: Original strand, 21353598 - 21353712
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaattt 393  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  21353598 tctgaaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaattt 21353697  T
Q  394 ctacccatttttcat 408  Q
    |||||||||||||||    
T  21353698 ctacccatttttcat 21353712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 288 - 407
Target Start/End: Complemental strand, 4386984 - 4386865
Alignment:
Q  288 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 387  Q
    |||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||     
T  4386984 acctactctgggggagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaacaaaacc 4386885  T
Q  388 taatttctacccatttttca 407  Q
    |||||||||| |||||||||    
T  4386884 taatttctactcatttttca 4386865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 29196188 - 29196314
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||||||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   ||||||||    
T  29196188 ttgttgtgaattcggactcaaatctcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaac 29196284  T
Q  160 aacaataataacaacacctagatctaatct 189  Q
    ||||||||||||||||||||||||||||||    
T  29196285 aacaataataacaacacctagatctaatct 29196314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 8370563 - 8370428
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||     
T  8370563 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaaa 8370465  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  8370464 agcttacacaagaacaagacataatttctacccattt 8370428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 48438230 - 48438361
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||||||  |||| |    
T  48438230 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcatataagctta 48438329  T
Q  374 ca-aagaacaaaacttaatttctacccatttt 404  Q
    || |||||||| || |||||||||||||||||    
T  48438330 cacaagaacaagacctaatttctacccatttt 48438361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 18552960 - 18552823
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  18552960 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 18552861  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  18552860 agcttacacaagaacaagacctaatttctacccatttt 18552823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 25795797 - 25795928
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||||| |||||||||| ||||||||||||||| ||| || |||||||||||||||||| ||  |||| |    
T  25795797 ttcggtccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaagaaattagcttataagctta 25795896  T
Q  374 c-aaagaacaaaacttaatttctacccatttt 404  Q
    | ||||||||| || |||||||||||||||||    
T  25795897 caaaagaacaagacctaatttctacccatttt 25795928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 1736382 - 1736245
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||| | ||      
T  1736382 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaacttata 1736283  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  1736282 agcttacacaagaacaagacctaatttctacccatttt 1736245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 403
Target Start/End: Original strand, 21711233 - 21711368
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||| ||||||||| |||||||||| |||||| |||||||||||||||||| |||     
T  21711233 acccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaaa 21711331  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||| ||| || ||||||||||||||||    
T  21711332 agcttacacaagagcaagacctaatttctacccattt 21711368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 3716079 - 3715942
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||| |  ||||||||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||| ||      
T  3716079 acccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 3715980  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    | || ||| |||||||| ||||||||||||||||||||    
T  3715979 aacttacacaagaacaagacttaatttctacccatttt 3715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 313 - 405
Target Start/End: Original strand, 8126685 - 8126778
Alignment:
Q  313 ctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccattttt 405  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| || ||||||||| |||||||||||||||||||||    
T  8126685 ctccaatccactacgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaatacttaatttctacccattttt 8126778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 9666270 - 9666396
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||| ||||||| |||| |||||||||||||  ||||||||||   || |||||||||     
T  9666270 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatctgtggagcaaaggaaagtagtaaccaatatcaaagcaa---ataacaagcaact 9666365  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  9666366 acaataataacaacacctagatctaatctag 9666396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 36029103 - 36029240
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||| ||| ||||| ||||  ||||| ||||| |||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  36029103 acccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 36029202  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    | || ||| |||||||| || |||||||||||||||||    
T  36029203 aacttacacaagaacaagacctaatttctacccatttt 36029240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 40592859 - 40592722
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||  |||||||| | |||||||||| |||| |||||||||| |||||| |||||||||||||||||| ||      
T  40592859 acccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 40592760  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| ||||||||||  |||||||||||||||||    
T  40592759 agcttacacaagaacaaaatctaatttctacccatttt 40592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 413
Target Start/End: Complemental strand, 3328403 - 3328288
Alignment:
Q  298 gaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttcta 396  Q
    |||||||||||| | || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||  |||| || |||||||||  | |||||||||    
T  3328403 gaggagagagcagcccttcaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtcctaatttcta 3328305  T
Q  397 cccatttttcatctcac 413  Q
    |||||||||||| ||||    
T  3328304 cccatttttcatatcac 3328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 40844668 - 40844798
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||| ||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| |    
T  40844668 ttcggtccaatatgacctaatctgg-ggagagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagctta 40844766  T
Q  374 ca-aagaacaaaacttaatttctacccatttt 404  Q
    || |||||||| || |||||||||||||||||    
T  40844767 cacaagaacaagacctaatttctacccatttt 40844798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 1417567 - 1417422
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||      
T  1417567 acccagttcggtccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttac-aatgagttataagaaattagcttata 1417469  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttttcatctcac 413  Q
    | || || |||||||||  | ||||||||||||||||||||| ||||    
T  1417468 aacttacaaaagaacaagtcctaatttctacccatttttcatatcac 1417422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 401
Target Start/End: Complemental strand, 30709867 - 30709733
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| ||||||| || |||||| |||||||||||||||||| ||      
T  30709867 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaaattagcttata 30709768  T
Q  368 agctcaca-aagaacaaaacttaatttctacccat 401  Q
    |||| ||| |||| ||| || ||||||||||||||    
T  30709767 agcttacacaagagcaagacctaatttctacccat 30709733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 415
Target Start/End: Original strand, 37466307 - 37466448
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||| | | |||||||||||||||||||||||| ||| |||||||||||||||||||   ||  |||| |    
T  37466307 ttcggtccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattaatttataagctta 37466405  T
Q  374 c-aaagaacaaaacttaatttctacccatttttcatctcactc 415  Q
    | |||||||||  | ||||||||||||||||||||| ||||||    
T  37466406 caaaagaacaagtcctaatttctacccatttttcatatcactc 37466448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 353
Target Start/End: Complemental strand, 25929522 - 25929435
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaa 353  Q
    |||||||| ||||||| ||||  |||| |||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  25929522 gtaacccagttcggtccaatacgacctactctggggg-gagagcagccctccaatccactaagatgaaagtgatacaaatgagttacaa 25929435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 32891192 - 32891117
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| ||||||||||||||||||||||||||| | |   |||||||||||||||||||||||||||||||||||||    
T  32891192 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccatttt 32891117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 44700283 - 44700409
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    ||||| |||||| |||||||||  ||||||||||| | |  ||||||  ||||| ||||||||||||||||||  ||||    ||| || ||||||||||    
T  44700283 ttgttttgaattcggactcaaaa-tcacaccaatacaaactatgatgcatggagcaaagaaaagtagtaaccaatatca----aagtaaacacaagcaac 44700377  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  44700378 aacaataataacaacacctagatctaatctag 44700409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 27305519 - 27305641
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 162  Q
    ||||||||||| |||||||||  |||||||||||||  ||||||||||||| |||| |||||||||||||  ||||||| || ||   ||||||||||||    
T  27305519 tgttgtgaattcggactcaaaa-tcacaccaataaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtaa-ca---acaagcaacaac 27305613  T
Q  163 aataataacaacacctagatctaatctag 191  Q
    || |||||| | |||||||||||||||||    
T  27305614 aacaataacca-acctagatctaatctag 27305641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 413
Target Start/End: Complemental strand, 3323722 - 3323622
Alignment:
Q  313 ctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccatttttcatctc 411  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  |||| || |||||||||  | ||||||||||||||| ||||| ||    
T  3323722 ctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtcataatttctacccattgttcatatc 3323624  T
Q  412 ac 413  Q
    ||    
T  3323623 ac 3323622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 27975029 - 27974941
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  27975029 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 27974941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 16264366 - 16264453
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  16264366 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagc 16264453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 23391711 - 23391838
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| | || |||| |||||||||||| | |  ||||||||||||| |||| |||||| ||||||  |||||||  | ||    |||| |||    
T  23391711 ttgttgtgaattcgaacacaaaactcacaccaatacaaactatgatgtgtggagaaaaggaaagtaataaccaatatcaaagtgaaca----caagaaac 23391806  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  23391807 aacaataataacaacacctagatctaatctag 23391838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 26299024 - 26299135
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatt 392  Q
    ||||| |||||||||| | |||||||| |||| |||||||||| |||||| |||||||||||||||||| ||  | || | | |||||||| || |||||    
T  26299024 tctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttataaacttagacaagaacaagacctaatt 26299123  T
Q  393 tctacccatttt 404  Q
    ||||||||||||    
T  26299124 tctacccatttt 26299135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 47923951 - 47923845
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagct--cacaaagaacaaaacttaatttctac 397  Q
    |||||||||| | || ||||| |||| |||||||||| |||||| |||||||||||||||||| ||| || |  |||||||| |||||| |||||| |||    
T  47923951 ggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaagaaattagcttaaaagtttacacaaagagcaaaacctaatttatac 47923852  T
Q  398 ccatttt 404  Q
    |||||||    
T  47923851 ccatttt 47923845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 21350811 - 21350933
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 161  Q
    ||||||||||| ||||||||| ||||||||||| |||||| |||||||| || |||| |||||||||||||  ||||||| || ||  ||     |||||    
T  21350811 tgttgtgaattcggactcaaaactcacaccaatgaaataaagatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtaaaca--ca-----aacaa 21350903  T
Q  162 caataataacaacacctagatctaatctag 191  Q
    ||| ||||||||||| ||||||||||||||    
T  21350904 caacaataacaacacttagatctaatctag 21350933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 32744516 - 32744590
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccattttt 405  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||||||||   ||||||||||||||||||    
T  32744516 aaagtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa--ctaatttctacccattttt 32744590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 24695209 - 24695104
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 398  Q
    |||||||||| | ||| ||||| ||| |||||||||| |||||| |||||||||||||||||| ||  | || || ||||||||| || |||||||||||    
T  24695209 ggagagagcaaccctctaatccgctatgatgaaagtgttacaaaagagttacaagaaattagcttataaacttacaaaagaacaagacctaatttctacc 24695110  T
Q  399 catttt 404  Q
    ||||||    
T  24695109 catttt 24695104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 25929406 - 25929365
Alignment:
Q  312 tctccaatccactaagatgaaagtgatacaaatgagttacaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25929406 tctccaatccactaagatgaaagtgatacaaatgagttacaa 25929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 5366351 - 5366263
Alignment:
Q  318 atccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    |||||||| |||||||||||||||||   |||||||||||||| | ||| | ||||||| ||| ||| |||||||||||||| ||||||    
T  5366351 atccactatgatgaaagtgatacaaagaggttacaagaaattatcttaaaatctcacaatgaaaaaatcttaatttctacccttttttc 5366263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 29813432 - 29813361
Alignment:
Q  61 gttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaac 130  Q
    ||||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| ||||||||||||||||    
T  29813432 gttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaagaaaagtagtaac 29813361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 35925534 - 35925625
Alignment:
Q  312 tctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||  ||  |||| |||  |||||||||| ||||||||||||||||    
T  35925534 tctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagtttataagcttacactagaacaaaacctaatttctacccattt 35925625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 22834806 - 22834932
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || |||| | ||     
T  22834806 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaggtaat 22834900  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||| ||||||||||||||||||||||||||    
T  22834901 aacaacaataacaacacctagatctaatctag 22834932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 32143337 - 32143419
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  32143337 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 32143419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 39153163 - 39153290
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||| ||||| || |||||| |||||||||||| | |  ||||||||||||| |||| |||||||||||||   |||    ||| || |||||||  |    
T  39153163 ttgttgagaattcgggctcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcggc 39153258  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    | ||||||||||||||||||||||||||||||    
T  39153259 agcaataataacaacacctagatctaatctag 39153290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 27986523 - 27986449
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  27986523 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 407
Target Start/End: Original strand, 29100203 - 29100309
Alignment:
Q  302 agagagcacctctccaatccactaagatgaa-agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccca 400  Q
    |||||||| ||||||| ||||||| ||| || |||||||||||   |||| ||||||||||| ||| | ||||||||||||||| | |||||||||| |     
T  29100203 agagagcagctctccattccactatgataaagagtgatacaaagaggttataagaaattagcttaaaaactcacaaagaacaaaccctaatttctactcg 29100302  T
Q  401 tttttca 407  Q
    |||||||    
T  29100303 tttttca 29100309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 32744335 - 32744377
Alignment:
Q  153 aagcaacaacaataataacaacacctagatctaatctagaaat 195  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  32744335 aagcaacaacaatgataacaacacctagatctaatctagaaat 32744377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 6794758 - 6794702
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  6794758 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 6794702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 761212 - 761087
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||||  ||||||||| | |  ||||||||||||| |||| ||||||||||||| |||||    |||  | | |||||||     
T  761212 ttgttgtgaattcggactcaaatc--acaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatca----aagtgaactcaagcaat 761119  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||| |||| || ||||||||||||||||||    
T  761118 aacaacaatagcagcacctagatctaatctag 761087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 9666556 - 9666623
Alignment:
Q  341 aaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    |||||||||||||||||||||| | |   ||||||||||||||||||  |||||||||||||||||||    
T  9666556 aaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttc 9666623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 22835082 - 22835156
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  22835082 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 22835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 23391989 - 23392063
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||| |||||||||||||| | |||   |||||||||||||| ||||||||||||||| ||||||    
T  23391989 aaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaac-aaacttaatttctactcatttt 23392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 33386737 - 33386669
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  33386737 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 39153441 - 39153515
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| ||||||||||||||||||||||||||| |||   ||||||||| |||| |||| |||||||||||||||||    
T  39153441 aaagggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaac-aaacctaatttctacccatttt 39153515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 26928652 - 26928590
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  26928652 tctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 26928590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 27452974 - 27453056
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||||| ||||| ||||  || || |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  27452974 ttcggtccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 27453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 32891459 - 32891388
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaacca 132  Q
    ||||||||| || ||||||||| ||||||||||| |||  ||||||||||||| |||| |||||||||||||    
T  32891459 ttgttgtgacttcggactcaaaactcacaccaatgaaactatgatgtgtggagcaaaggaaagtagtaacca 32891388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 23410216 - 23410257
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  23410216 cacaagcaacaaaaatattaacaacacctagatctaatctag 23410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 31314724 - 31314683
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  31314724 cacaagcaacaacaataataacaacacctaaatataatctag 31314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 760935 - 760861
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| | || |||||||||||||||||    
T  760935 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-agacctaatttctacccatttt 760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 25517071 - 25517131
Alignment:
Q  347 gttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||| ||||||||||| ||| ||||||||||||||||| | ||||||||||  ||||||||    
T  25517071 gttataagaaattagcttaaaagctcacaaagaacaaaccctaatttctacttatttttca 25517131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 29196466 - 29196541
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| ||| |||||||||||| |  |  ||||||||||||||||| | |||||||||||||||||    
T  29196466 aaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttctacccatttt 29196541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 29682447 - 29682373
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| || ||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  29682447 aaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaac-aaacataatttctacccatttt 29682373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 2671647 - 2671585
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  2671647 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 2671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 7167280 - 7167342
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  7167280 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 7167342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 8477398 - 8477460
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  8477398 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 8477460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 8739124 - 8739062
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  8739124 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 8739062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 9091362 - 9091300
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  9091362 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 9091300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 9581370 - 9581297
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccattt 403  Q
    |||| |||||||||| |||| ||||||||||| |||   |||||||||||||| |||| ||||||||||||||||    
T  9581370 aaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 29811238 - 29811110
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| | ||||||| |||||||||||  |||  ||||| ||||||| |||| |||||||||||||   ||||||  ||  | |||||||||     
T  29811238 ttgttgtgaattcgaactcaaaactcacaccaatacaaaatatgatttgtggagcaaaggaaagtagtaaccaatttcaaag--ag--aacacaagcaat 29811143  T
Q  160 aa-caataataacaacacctagatctaatctag 191  Q
    || ||| ||||||| ||||||||||||||||||    
T  29811142 aatcaacaataacagcacctagatctaatctag 29811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 40372856 - 40372794
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  40372856 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 40372794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 1305990 - 1306046
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  1305990 ggagatagcagctctccaatccactacgatgaaagtgttacaaa-gggttacaagaaa 1306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 23410409 - 23410483
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||| |||| | ||||||||| |||   |||||||||||||  |||| |||||||||||||||||    
T  23410409 aaagtgatacaaatgggttatacgaaattagcttaaacaagctcacaaagaa-taaacataatttctacccatttt 23410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 39040063 - 39039995
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||||| ||||| ||||  ||||| | ||||| || ||||||||||||||| |||||||||| |||||    
T  39040063 ttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 2838117 - 2837972
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| |||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | |||    
T  2838117 acccagttcggtccaatatgacctactctgggggagagagcacatctccaatccactaaaatgaaagtgatacaaatgagttacaagaaattagtacaag 2838018  T
Q  368 agctcacaaagaacaaaacttaatttctacccatttttcatctcac 413  Q
    ||||||||||||||| ||| |||||| | |||||||||||| ||||    
T  2838017 agctcacaaagaacacaacctaatttttgcccatttttcatgtcac 2837972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 2869780 - 2869640
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| |||| |||| | |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  2869780 acccagttcggtccaatatgacctactctaggggagagagtagctctccaatccactaagatgaaagtgatacaaaggagttacaagaaattagcttaaa 2869681  T
Q  368 agctcacaaagaac-aaaacttaatttctacccatttttca 407  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  2869680 agctcacaaagaacaaaaacctaatttctacccatttttca 2869640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 1345628 - 1345483
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccact-aagatgaaagtgatacaaatgagttacaagaaattagcataa 366  Q
    ||||| ||||||| ||||| |||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |     
T  1345628 acccagttcggtccaatatgacctactctgggggagagagcacctctccgatccacttaagatgaaagtgatacaaatgagttgcaagaaattagcacat 1345529  T
Q  367 gagctcacaaagaacaaaacttaatttctacccatttttcatctcac 413  Q
    ||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  1345528 gagctcacaaa-aacacaacctaatttctacccatttttcatgtcac 1345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 20522230 - 20522367
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| | |||||||||||||||  ||      
T  20522230 acccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaaattagattata 20522329  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttt 404  Q
    |||| || ||||||||| ||||||||||||||||||||    
T  20522330 agcttacaaaagaacaagacttaatttctacccatttt 20522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 21629985 - 21630090
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 398  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||  ||  |||| ||| |||||||| ||||||||||||||    
T  21629985 ggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttataagcttacacaagaacaagacttaatttctacc 21630084  T
Q  399 catttt 404  Q
    ||||||    
T  21630085 catttt 21630090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 398
Target Start/End: Complemental strand, 27149372 - 27149251
Alignment:
Q  277 ggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaa 376  Q
    |||| ||||| |||| || ||| |||||||||| |||||||||||||||  |||||||||||||||| | || ||||||||||| | ||| |||||||||    
T  27149372 ggtccaatatgacctactatgggggagagagcagctctccaatccactataatgaaagtgatacaaaggggtaacaagaaattaccttaaaagctcacaa 27149273  T
Q  377 agaacaaaacttaatttctacc 398  Q
    ||||||| |||||| |||||||    
T  27149272 agaacaagacttaacttctacc 27149251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 31056086 - 31056191
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 398  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||  |||| || ||||||||| || |||||||||||    
T  31056086 ggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaataaattagcttataagcttacaaaagaacaagacctaatttctacc 31056185  T
Q  399 catttt 404  Q
    ||||||    
T  31056186 catttt 31056191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 33162254 - 33162380
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||| ||||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||    
T  33162254 tgttgtgaattcggactcaaaa-tcacatcaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaaca 33162349  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  33162350 acaataataacaacacctagatctaatctag 33162380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 34682421 - 34682284
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| || |  ||||| |||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||||||||| ||      
T  34682421 acccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaattagcttaca 34682322  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
     ||| ||| |||||||| ||||||||||||||||||||    
T  34682321 ggcttacacaagaacaagacttaatttctacccatttt 34682284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 399
Target Start/End: Original strand, 13569338 - 13569470
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  13569338 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 13569437  T
Q  368 agctcaca-aagaacaaaacttaatttctaccc 399  Q
    || | ||| |||||||| || ||||||||||||    
T  13569438 agtttacacaagaacaagacctaatttctaccc 13569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 39285202 - 39285077
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaata-aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 161  Q
    ||||||||||| ||||| ||| |||| ||||||| ||  ||||||||||||| ||||||||||||||||||   |||||| || ||    ||||||||||    
T  39285202 tgttgtgaattcggacttaaaactcataccaatacaactatgatgtgtggagcaaagaaaagtagtaaccaatttcaaagtaaaca----caagcaacaa 39285107  T
Q  162 caataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||    
T  39285106 caataataacaacacctagatctaatctag 39285077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 10445525 - 10445394
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||||||||| ||  | || |    
T  10445525 ttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaaattagcttacaatctta 10445426  T
Q  374 ca-aagaacaaaacttaatttctacccatttt 404  Q
    || |||||||| || |||||||||||||||||    
T  10445425 cacaagaacaagacctaatttctacccatttt 10445394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 401
Target Start/End: Complemental strand, 10707339 - 10707205
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | ||| ||||||| || ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  10707339 acccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 10707240  T
Q  368 agctcaca-aagaacaaaacttaatttctacccat 401  Q
    |||| ||| |||||||| || ||||||||||||||    
T  10707239 agcttacacaagaacaagacctaatttctacccat 10707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 407
Target Start/End: Complemental strand, 15903979 - 15903838
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 364  Q
    |||||| | |||| || ||||| |||| |||||  |||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||||| |||| |    
T  15903979 gtaacctagttcgatccaatatgacctactctgacggagagagaaaatctccaatccactaagataaaagtgatacaaaggggttacaagaaa-tagctt 15903881  T
Q  365 aagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |  |||||||||||||||||   ||||||||||||||||||||    
T  15903880 acaagctcacaaagaacaaattctaatttctacccatttttca 15903838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 34388868 - 34388962
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||||||||||| ||||| ||||  ||||| |||||||| | ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  34388868 acccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagc 34388962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 14699094 - 14698958
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||| | |||||| |||||||||||||||||| ||      
T  14699094 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaagaaattagcttata 14698996  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  14698995 agcttacacaagaacaagacctaatttctacccatttt 14698958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 17865213 - 17865350
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||| ||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  17865213 acccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 17865312  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || ||||||||||| |||||    
T  17865313 agcttacacaagaacaagacataatttctacctatttt 17865350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 40014967 - 40015072
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 398  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||| | |||||||||| ||| | ||||| ||||||||| || ||||||||||     
T  40014967 ggagagaacatccctccaatccactaagatgaaagtgatacaaatgagttgcgagaaattagcttaaaaactcacaaaagaacaagacctaatttctact 40015066  T
Q  399 catttt 404  Q
    ||||||    
T  40015067 catttt 40015072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 8040070 - 8040209
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaa--tgagttacaagaaattagcata 365  Q
    ||||| ||| ||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| ||||||   |||||||||||||||||| ||    
T  8040070 acccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagctta 8040169  T
Q  366 agagctcaca-aagaacaaaacttaatttctacccatttt 404  Q
      |||| ||| |||||||| || |||||||||||||||||    
T  8040170 caagcttacacaagaacaagacctaatttctacccatttt 8040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 33118152 - 33118283
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  | ||| |||||||||| | ||||||||||||| |||||||| | ||||||  ||||||||||||||||| ||  |||| |    
T  33118152 ttcggtccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaaattagcttataagctta 33118251  T
Q  374 ca-aagaacaaaacttaatttctacccatttt 404  Q
    || |||||||| ||||||||||||||||||||    
T  33118252 cacaagaacaagacttaatttctacccatttt 33118283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 29868237 - 29868111
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||| ||||| ||||| | |  ||||||||||||| ||||||||||||||| ||   | |||| || ||    |||||||||    
T  29868237 tgttgtgaattcggactcaaatttcacagcaatacaaactatgatgtgtggagcaaagaaaagtagtaatcaattttaaagtaaaca----caagcaaca 29868142  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  29868141 acaataataacaacacctagatctaatctag 29868111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 42362713 - 42362588
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| ||||||||||||| ||||||||  | |     |||||||||    
T  42362713 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaaaatcaaagtgaact----caagcaaca 42362619  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  42362618 acaataataacaacacctagatctaatctag 42362588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 2838314 - 2838188
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataa-ataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||| || |||| |||| ||||||||||||| |   ||||||||||||||||| |||||||||||||| ||||    ||| || ||||| |||||    
T  2838314 ttgttgtgagttcggacacaaaactcacaccaataatactttgatgtgtggagtaaaggaaagtagtaaccactatca----aagtaaacacaaacaaca 2838219  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||| ||||||||||||||||| ||||||||    
T  2838218 acaacaataacaacacctagatataatctag 2838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 8390205 - 8390100
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 398  Q
    |||||||||| ||||||||||||||| |||||||||| || ||| |||||||||||||||||| ||  ||||  || |||||||| || |||||||||||    
T  8390205 ggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacc 8390106  T
Q  399 catttt 404  Q
    ||||||    
T  8390105 catttt 8390100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 723546 - 723672
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||| ||||    
T  723546 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caatcaac 723640  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  723641 aacaataataacaacacctagatctaatctag 723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 407
Target Start/End: Complemental strand, 28770841 - 28770722
Alignment:
Q  288 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 387  Q
    |||| |||||||||| |||||| |||||| |||| ||| ||| | | |||||||||    ||||||||||||||| ||| |||||||||||||||||       
T  28770841 acctactctggaggatagagcagctctccgatcctctacgataagaatgatacaaagatattacaagaaattagcttaaaagctcacaaagaacaaactc 28770742  T
Q  388 taatttctacccatttttca 407  Q
    ||||||||||||||||||||    
T  28770741 taatttctacccatttttca 28770722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 34139572 - 34139698
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||||||||    
T  34139572 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaac 34139666  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||| |||||||||||||||||    
T  34139667 aacaataataacaagacctagatctaatctag 34139698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 39482947 - 39483078
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  | ||| ||||||||||   ||||||||||||| ||||||| || |||||| |||||||||||||||||| ||  |||| |    
T  39482947 ttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaaattagcttataagctta 39483046  T
Q  374 ca-aagaacaaaacttaatttctacccatttt 404  Q
    || |||||||| || |||||||||||||||||    
T  39483047 cacaagaacaagacctaatttctacccatttt 39483078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 11067629 - 11067543
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||||||||||||||||||||||||||||||||||||||||    
T  11067629 atgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaacaacaataataacaacacctagatctaatctag 11067543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 404
Target Start/End: Complemental strand, 33528674 - 33528576
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccat 401  Q
    |||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  ||||    |||||||| || ||||||||||||||    
T  33528674 agagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct----aagaacaagacctaatttctacccat 33528579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 36773926 - 36773800
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| ||| |||||  ||||||||||| | |  ||||||||||||| |||  |||||||||||||  |||||||| | |||    ||||||||    
T  36773926 tgttgtgaattcggattcaaaa-tcacaccaatacaaactatgatgtgtggagcaaatgaaagtagtaaccaatatcaaagccaacaag---aagcaaca 36773831  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  36773830 acaataataacaacacctagatctaatctag 36773800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 28259264 - 28259129
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  28259264 acccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 28259166  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| |  ||||||||||||||||    
T  28259165 agcttacacaagaacaagatctaatttctacccattt 28259129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 36317812 - 36317939
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| ||||||||||||  || |||||||||| ||  |||  |||||||||||||   |||||| || ||    ||||||||    
T  36317812 ttgttgtgaatttggactcaaaactcacaccaatacaaacaatgatgtgtagaacaaatgaaagtagtaaccaatttcaaagtaaaca----caagcaac 36317907  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    | ||||||||||||||||||||| ||||||||    
T  36317908 agcaataataacaacacctagatttaatctag 36317939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 11151395 - 11151521
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| | ||||||| |||| ||||||| | |  ||||||||||||| ||| ||||||||||| ||  |||||||  | ||    |||||||||    
T  11151395 tgttgtgaattcgaactcaaaactcataccaatacaaactatgatgtgtggagcaaataaaagtagtaatcaatatcaaagtgaaca----caagcaaca 11151490  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||| |||||||||||||||    
T  11151491 acaataataacaacagctagatctaatctag 11151521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 14633624 - 14633753
Alignment:
Q  59 cagttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagc 156  Q
    |||||||||||| ||  ||||||||  ||||||||||| | |  |||||||||| || |||| |||||||||||||  |||||||  | ||    |||||    
T  14633624 cagttgttgtgatttcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagc 14633718  T
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||||||    
T  14633719 aacaacaataataacaacacctagatctaatctag 14633753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 18674454 - 18674349
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccat 401  Q
    |||||||| |||||| ||| |||| ||  | |||||||| || | |||||||||||||||  ||| ||||||||||||||||| | ||||||||| ||||    
T  18674454 agagagcagctctccgatctactatgacaagagtgataccaaggggttacaagaaattagtttaaaagctcacaaagaacaaaccataatttctatccat 18674355  T
Q  402 ttttca 407  Q
    ||||||    
T  18674354 ttttca 18674349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 407
Target Start/End: Original strand, 35397548 - 35397659
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaattt 393  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||| |||   ||||| | |||||||| ||| || ||| ||||||| |||| ||||||    
T  35397548 tctggaggagatagcagctcttcaatccactaagatgaaagtgatataaagaggttacga-aaattagcttaaaaggtcataaagaac-aaacctaattt 35397645  T
Q  394 ctacccatttttca 407  Q
    ||| ||||||||||    
T  35397646 ctatccatttttca 35397659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 2334218 - 2334341
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||||||||  ||||||||  ||||||||||| | |  |||||||||| || |||| |||||||||||||   |||||| || ||    |||||||||    
T  2334218 tgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtagtaaccaatttcaaagtaaaca----caagcaaca 2334312  T
Q  161 acaataataacaacacctagatctaatct 189  Q
    |||||||||||||||||||||||||||||    
T  2334313 acaataataacaacacctagatctaatct 2334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 11151671 - 11151745
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||| |||||||||||||||| |||   ||||||||||||||||| | |||||||||||||||||    
T  11151671 aaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatc-taatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 403
Target Start/End: Complemental strand, 23078525 - 23078422
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 398  Q
    ||||||| || ||||||||||||||| |||||||||| || ||| ||||||||||||| |||| |   |||| ||| |||||||| ||||||||||||||    
T  23078525 ggagagaacaactctccaatccactatgatgaaagtgttagaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaagacttaatttctacc 23078427  T
Q  399 cattt 403  Q
    |||||    
T  23078426 cattt 23078422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 14202310 - 14202349
Alignment:
Q  152 caagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14202310 caagcaacaacaataataacaacacctagatctaatctag 14202349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 16940296 - 16940202
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||||||||||| ||||| || |  ||||| ||| ||| || | ||||||||||||| |||||||||| |||||| || |||||||||||||||    
T  16940296 acccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagc 16940202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 17010961 - 17010867
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||||||||||| ||||| || |  ||||| ||| ||| || | ||||||||||||| |||||||||| |||||| || |||||||||||||||    
T  17010961 acccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagc 17010867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 36987873 - 36988001
Alignment:
Q  61 gttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaa 158  Q
    ||||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||   |||    ||| || |||||||||    
T  36987873 gttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcaa 36987967  T
Q  159 caa-caataataacaacacctagatctaatctag 191  Q
     || ||| ||||||||||||||||||||||||||    
T  36987968 taatcaacaataacaacacctagatctaatctag 36988001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 11690589 - 11690515
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  11690589 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 11690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 42362440 - 42362366
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  42362440 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 42362366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 3491786 - 3491848
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  3491786 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 3491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 11690857 - 11690787
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaac 130  Q
    |||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||    
T  11690857 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaac 11690787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 25398531 - 25398593
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25398531 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 25398593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 25403669 - 25403731
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25403669 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 25403731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 25407658 - 25407720
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25407658 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 25407720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 406
Target Start/End: Original strand, 723824 - 723900
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| ||||||||||||| |||||    
T  723824 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccagttttc 723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 24885953 - 24885828
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  |||||||||| || |||| ||| |||||||||  |||||||  | ||    |||| ||||    
T  24885953 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaaccaatatcaaagtgaaca----caagaaaca 24885859  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    ||||| |||||||||||||||||||||||||    
T  24885858 acaatgataacaacacctagatctaatctag 24885828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 14202497 - 14202559
Alignment:
Q  343 atgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  14202497 atgagttacaagaaattagcttaaacaagctcacaaagaac-aaacataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 14633906 - 14633980
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  14633906 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aatcctaatttctacccatttt 14633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 42039750 - 42039619
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa-ttagcataagagctc 372  Q
    ||||||| ||||| ||||  ||||  |||||||||| ||||| ||||||||| |||||||||| ||| || ||||||||||||| ||||| |   ||||     
T  42039750 ttcggtccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaa-gagttacaagaaaattagcttgcaagctt 42039652  T
Q  373 aca-aagaacaaaacttaatttctacccatttt 404  Q
    ||| || ||||| || |||||||||||||||||    
T  42039651 acacaaaaacaagacctaatttctacccatttt 42039619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 6594804 - 6594934
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    |||  | |||||| || |    
T  6594804 tgttgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaagtaaagtagtaaccaatatca----aagtgaacacaagtaata 6594898  T
Q  161 a-caataataacaacacctagatctaatctagaaat 195  Q
    | ||| ||||||| ||||||||||||||||||||||    
T  6594899 atcaacaataacagcacctagatctaatctagaaat 6594934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 11098988 - 11098926
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  11098988 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 11098926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 14291524 - 14291586
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  14291524 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 14291586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 9296456 - 9296400
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  9296456 ggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 9296400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 24885742 - 24885675
Alignment:
Q  338 tacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||| ||||||    
T  24885742 tacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctactcatttt 24885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 4561435 - 4561359
Alignment:
Q  66 tgtgaattgggactcaaatctcacaccaataaataatgatgtgtgg-agtaaagaaaagtagtaaccacaatcaaag 141  Q
    |||||||  ||||||||||||||||||||||||    ||||||||| |  ||||||||||||||||||  |||||||    
T  4561435 tgtgaatatggactcaaatctcacaccaataaacttagatgtgtggaacaaaagaaaagtagtaaccaatatcaaag 4561359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 27139843 - 27139951
Alignment:
Q  299 aggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacc 398  Q
    ||||||||||| ||||||||| ||||| ||  | |||||||||||   |||||| |||||||   | | ||||||||||| ||||| | ||||||||||     
T  27139843 aggagagagcagctctccaattcactatgaaaatagtgatacaaaaatgttacaggaaattaaatttaaagctcacaaagtacaaaccctaatttctaca 27139942  T
Q  399 catttttca 407  Q
    ||| |||||    
T  27139943 catatttca 27139951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 34139851 - 34139925
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||| ||| |||||||||||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  34139851 aaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttt 34139925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 28617312 - 28617173
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| |||| |||||| |||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||| |||     
T  28617312 acccagttcggtccaatatgacctactctgggggagagagcagctctccaatccactaagatgaaagtgatacaatggggttacaagaaattagcttaaa 28617213  T
Q  368 agctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  28617212 agctcacaaagaacaaaacctaatttctacctatttttca 28617173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 274 - 407
Target Start/End: Complemental strand, 5817350 - 5817218
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| |||| |||||| |||||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||    
T  5817350 ttcggtccaatatgacctactctgg-ggagagagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaatttgcataagagctca 5817252  T
Q  374 caaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||| ||||||||| ||||||||||    
T  5817251 caaagaacaaaacctaatttctatccatttttca 5817218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 405
Target Start/End: Original strand, 3047261 - 3047402
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggagg-agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagca 363  Q
    |||||||| ||||||| ||||| |||| |||||| || |||||||   | ||||||||||||| ||||||||| ||||||||||||||||||||| | |     
T  3047261 gtaacccagttcggtccaatatgacctgctctggggggagagagccgttatccaatccactaatatgaaagtggtacaaatgagttacaagaaatcaact 3047360  T
Q  364 taagagctcacaaagaacaaaacttaatttctacccattttt 405  Q
    ||| |||||||||||||||| || ||||||||||||||||||    
T  3047361 taaaagctcacaaagaacaagacctaatttctacccattttt 3047402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 29159813 - 29159951
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  29159813 acccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 29159912  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattttt 405  Q
    |||| ||| |||||||| || ||||||||||||||||||    
T  29159913 agcttacacaagaacaagacctaatttctacccattttt 29159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 405
Target Start/End: Complemental strand, 33332537 - 33332399
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| |||| |||||||| ||||  ||||| |||||||||| | |||||||||||||||||||||||| |||||| |||||||||||||||||| ||      
T  33332537 acccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttata 33332438  T
Q  368 agctcac-aaagaacaaaacttaatttctacccattttt 405  Q
    |||| || ||||||||| || |||||||||| |||||||    
T  33332437 agcttacaaaagaacaagacctaatttctactcattttt 33332399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 2647783 - 2647646
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||||||||| | ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  2647783 acccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 2647684  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  2647683 agcttacacaagaacaagacctaatttctacccatttt 2647646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 46516397 - 46516260
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| |||     
T  46516397 acccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaa 46516298  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  46516297 agcttacacaagaacaagacataatttctacccatttt 46516260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 2580400 - 2580545
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||||||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||| |       
T  2580400 acccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaatagcttgca 2580498  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttttcatctcac 413  Q
    |||| ||| ||||||||  | || |||||||||||||||||| ||||    
T  2580499 agcttacacaagaacaagtcctagtttctacccatttttcatatcac 2580545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 55958 - 56094
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  55958 acccagttcggtccaatatgacctaatctgg-ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 56056  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  56057 agcttacacaagaacaagacctaatttctacccatttt 56094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 23403100 - 23402961
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||||||||||||||||| ||||  ||||  |||| ||||| | |||||||| ||||||||||||||| ||| ||||||||||||||||||||| ||      
T  23403100 acccaattcggtctaatatgacctaatctgagggagtgagcagccctccaatctactaagatgaaagtgttac-aatgagttacaagaaattagcttata 23403002  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttttca 407  Q
    |||| || |||||||||  | ||||||||||||||||||||    
T  23403001 agcttacaaaagaacaagtcctaatttctacccatttttca 23402961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 20284099 - 20284244
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||||||||||||| ||| |||| |||||||||||||||| ||      
T  20284099 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgcgttacaagaaattagcttata 20284197  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttttcatctcac 413  Q
    |||| || |||||||||  | |||||||||||| |||||||| ||||    
T  20284198 agcttacaaaagaacaagtcctaatttctacccttttttcatatcac 20284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 41317238 - 41317364
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| | |||||||||||||||||||| | |  ||||||| ||||| |||| |||||||||||||  |||||||  | ||    |||||||||    
T  41317238 tgttgtgaattcgaactcaaatctcacaccaatacaaactatgatgtttggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaaca 41317333  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  41317334 acaataataacaacacctagatctaatctag 41317364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 47675936 - 47676062
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||| |||| |||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    |||||||||    
T  47675936 tgttgtgaattcggacacaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaaca 47676031  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  47676032 acaataataacaacacctagatctaatctag 47676062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 36146251 - 36146338
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||||||||||||||||| |||||||||||||||    
T  36146251 atgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaacaacaataataacaacatctagatctaatctag 36146338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 9190095 - 9189949
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcataa 366  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |      
T  9190095 acccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgc 9189997  T
Q  367 gagctcaca-aagaacaaaacttaatttctacccatttttcatctcac 413  Q
     |||| ||| ||||||||  | ||||||||||||||||||||| ||||    
T  9189996 aagcttacacaagaacaagtcctaatttctacccatttttcatatcac 9189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 14069632 - 14069759
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||| | |  ||||||||||||| |||| ||||||||||| |   |||||| || ||    ||||||||    
T  14069632 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaaca----caagcaac 14069727  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    || |||||||||||||||||||||||||||||    
T  14069728 aataataataacaacacctagatctaatctag 14069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 14379660 - 14379787
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||| | |  ||||||||||||| |||| ||||||||||| |   |||||| || ||    ||||||||    
T  14379660 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaactaatttcaaagtaaaca----caagcaac 14379755  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    || |||||||||||||||||||||||||||||    
T  14379756 aataataataacaacacctagatctaatctag 14379787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 35960852 - 35960963
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatt 392  Q
    ||||| |||||||||| | |||||| |||||| |||||||||| ||||||||||||| ||||||||||| ||  |||| || ||||||||| || |||||    
T  35960852 tctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaatgagttagaagaaattagcttataagcttacaaaagaacaatacctaatt 35960951  T
Q  393 tctacccatttt 404  Q
    ||||||||||||    
T  35960952 tctacccatttt 35960963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 19502547 - 19502421
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||||||||  |||||||| ||||||| |||| | |  ||||||||||||| |||| |||||||||||||   |||||| ||   || ||||||||||    
T  19502547 tgttgtgaattcagactcaaaactcacactaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaa---at-acaagcaaca 19502452  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  19502451 acaataataacaacacctagatctaatctag 19502421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 49091705 - 49091806
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 400  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||| | ||  |||| ||| |||||||| || |||||||||||||    
T  49091705 agagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctaccca 49091804  T
Q  401 tt 402  Q
    ||    
T  49091805 tt 49091806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 21983294 - 21983432
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatac-aaatgagttacaagaaattagcataa 366  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||| |||| |      
T  21983294 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaaagagttacaagaaaatagcttgc 21983393  T
Q  367 gagctcaca-aagaacaaaacttaatttctacccatttt 404  Q
     |||| ||| |||||||| || || ||||||||||||||    
T  21983394 aagcttacacaagaacaagacctagtttctacccatttt 21983432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 23555412 - 23555283
Alignment:
Q  61 gttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaa 158  Q
    ||||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  ||||    |||  | |||||||||    
T  23555412 gttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaagcaa 23555317  T
Q  159 caa-caataataacaacacctagatctaatctag 191  Q
     || ||| ||||||||||||||||||||||||||    
T  23555316 taatcaacaataacaacacctagatctaatctag 23555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 18127016 - 18126888
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||  |||  |||||||||||||||||| |||||||||| ||  ||||    |||  | |||||||||     
T  18127016 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaatcaatatca----aagtgaacacaagcaat 18126921  T
Q  160 aa-caataataacaacacctagatctaatctag 191  Q
    || ||| ||||||||||||||||||||||||||    
T  18126920 aatcaagaataacaacacctagatctaatctag 18126888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 9185252 - 9185178
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| ||||||| ||||||||||  ||||| |||||||| | |||||||||||||||||||||||||| |||||    
T  9185252 acccagttcggtccaatataacctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 30024641 - 30024682
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30024641 cacaagcaacaacaataataacaacacctagatctaatctag 30024682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 24525345 - 24525424
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatc 183  Q
    ||||| |||| || ||||||||||||||| ||  |||||||||| |||   ||||||||||||||||||||||||||||||||    
T  24525345 atgatatgtgtagcaaagaaaagtagtaatcaatatcaaagcaaacaa---caagcaacaacaataataacaacacctagatc 24525424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 4796756 - 4796617
Alignment:
Q  266 taacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcata 365  Q
    ||||||| ||||||| || || ||||  ||||| ||||| |||| | ||| ||||||||| ||||||| || |||||| |||||||||||||||||| ||    
T  4796756 taacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaagaaattagctta 4796657  T
Q  366 agagctcaca-aagaacaaaacttaatttctacccatttt 404  Q
      |||| ||| |||||||| || | |||| ||||||||||    
T  4796656 taagcttacacaagaacaagacctcatttatacccatttt 4796617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 24525985 - 24526051
Alignment:
Q  340 caaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||||||||||| |  |  ||||||||||||||||||| |||||||||||||||||    
T  24525985 caaatgagttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccatttt 24526051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 47673743 - 47673870
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    ||||| |||||| |||| |||| |||||||||||| | |  ||||||||||||  |||  |||||||||||||  |||||||  | ||    ||| ||||    
T  47673743 ttgttatgaattcggacacaaaactcacaccaatacaaactatgatgtgtggaacaaaagaaagtagtaaccaatatcaaagtgaaca----caaacaac 47673838  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  47673839 aacaataataacaacacctagatctaatctag 47673870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 26417685 - 26417559
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||| |||||||||||| |||||||||||||  ||||    ||| || ||||||||| |    
T  26417685 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatatgtggagtaaaggaaagtagtaaccaatatca----aagtaaccacaagcaata 26417590  T
Q  161 a-caataataacaacacctagatctaatcta 190  Q
    | ||| ||||||| ||||||||| |||||||    
T  26417589 atcaacaataacagcacctagatataatcta 26417559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 31105200 - 31105322
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata-atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 161  Q
    ||||||||||| | || |||| ||||||||||||||   |||||||||||||||||| |||||||||| ||  ||||    ||| || ||||||||||||    
T  31105200 tgttgtgaattcgaacacaaaactcacaccaataaaactatgatgtgtggagtaaaggaaagtagtaatcaatatca----aagtaaacacaagcaacaa 31105295  T
Q  162 caataataacaacacctagatctaatctag 191  Q
    |   |||||||||||| |||||||||||||    
T  31105296 c---aataacaacaccaagatctaatctag 31105322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 31519258 - 31519133
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| ||||||||| ||||| |||||  |||||| ||||||||||| ||| |||| ||||||  |  ||||| | ||    ||| ||||| ||    
T  31519258 tgttgtgaatttggactcaaaactcacgccaatgaaaataa-gatgtgtggagcaaataaaaatagtaattaatatcaatgtaa----tcataagcagca 31519164  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  31519163 acaataataacaacacctagatctaatctag 31519133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 44848744 - 44848683
Alignment:
Q  295 ctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  44848744 ctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 44848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 4586531 - 4586459
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaa--taaataatgatgtgtggagtaaagaaaagtagtaacca 132  Q
    |||||||||||| ||||||||||||||||||||  ||||  ||||||||||||| |||| ||||| |||||||    
T  4586531 ttgttgtgaattcggactcaaatctcacaccaatgtaaactatgatgtgtggagcaaaggaaagtggtaacca 4586459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 8153621 - 8153581
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatcta 190  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  8153621 cacaagcaacaacaataataacaacacctagatctgatcta 8153581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 495822 - 495913
Alignment:
Q  96 aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||| ||||| ||||||| |||| |||||||||||||  ||||    ||| || ||||| ||| ||||| ||||||||||||||||||||||||||    
T  495822 aaattatgatatgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaaacaataacaacaataacaacacctagatctaatctag 495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 23564893 - 23564995
Alignment:
Q  86 tcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatcta 185  Q
    |||||| |||||| |  |||||||||||| |||||||||||| ||||  ||||    ||| || |||||||||||||   |||||||| |||||||||||    
T  23564893 tcacactaataaacatagatgtgtggagtgaagaaaagtagtgaccaatatca----aagtaaccacaagcaacaac---aataacaaaacctagatcta 23564985  T
Q  186 atctagaaat 195  Q
    ||||||||||    
T  23564986 atctagaaat 23564995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 38671025 - 38671150
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| ||| ||||||| | ||||||||  | ||    ||||||||     
T  38671025 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaacaaaaatcaaagtgaaca----caagcaacg 38671119  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||| |||||||||||||| |||||||    
T  38671120 acaataatgacaacacctagatcaaatctag 38671150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 18413681 - 18413737
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  18413681 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 18413737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 413
Target Start/End: Complemental strand, 9235596 - 9235524
Alignment:
Q  342 aatgagttacaagaaattagcataagagctcacaaa-gaacaaaacttaatttctacccatttttcatctcac 413  Q
    ||||||||||||||||||||| ||  |||| ||||| ||||||  | ||||||||||||||||||||| ||||    
T  9235596 aatgagttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcac 9235524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 38671302 - 38671376
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||| ||||||| |||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  38671302 aaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttt 38671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 406
Target Start/End: Original strand, 41649091 - 41649166
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagc-ataagagctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    |||| |||||||||| |||||||||||||||| | |  |||||||||||||| |||| ||||||||||| |||||||    
T  41649091 aaagggatacaaatgggttacaagaaattagctaaacaagctcacaaagaac-aaacctaatttctaccaatttttc 41649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 1533505 - 1533443
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  1533505 tctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 1533443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 2058001 - 2058063
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  2058001 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 2058063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 401
Target Start/End: Original strand, 2479381 - 2479479
Alignment:
Q  303 gagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacccat 401  Q
    ||||||| ||||| ||||||||| |||||||||| |||||| |||||| |||||| |||| |   |||| ||| |||||||| || ||||||||||||||    
T  2479381 gagagcagctctcaaatccactatgatgaaagtgttacaaa-gagttataagaaaatagcttgcaagcttacacaagaacaagacctaatttctacccat 2479479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 18408799 - 18408861
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  18408799 tctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaa-gggttacaagaaa 18408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 21639844 - 21639906
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||||||  ||||||||| |||||| | |||||||||||    
T  21639844 tctgggggagagagcagctctccaatccactataatgaaagtgttacaaa-gggttacaagaaa 21639906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 357
Target Start/End: Original strand, 21988918 - 21989006
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatac-aaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||||||||||  || ||||||||||||||  |||||||||| ||| ||| |||||||||||||    
T  21988918 acccagttcggtccaatatgacctaatctggaggagag--caactctccaatccactttgatgaaagtgttacaaaaagagttacaagaaa 21989006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 43864609 - 43864486
Alignment:
Q  67 gtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa-ca 163  Q
    ||||||| ||||||||| |||||||||||  |||  |||||||||||||||||| ||||| |||| ||  ||||    |||  | ||||||||| || ||    
T  43864609 gtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtggtaatcaatatca----aagtgaacacaagcaataatca 43864514  T
Q  164 ataataacaacacctagatctaatctag 191  Q
    | ||||||| ||||||||||||||||||    
T  43864513 acaataacagcacctagatctaatctag 43864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 1114021 - 1113895
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||||||||  || ||||| |||||| ||||| | |  ||||||||||||| |||| ||||| ||||| |  ||||||| || ||    ||||||| |    
T  1114021 tgttgtgaattccgaatcaaaactcacatcaatacaaactatgatgtgtggagcaaaggaaagtggtaactaatatcaaagtaaaca----caagcaata 1113926  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||| ||||| ||||||||||||||||||||    
T  1113925 acaacaataataacacctagatctaatctag 1113895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 29991382 - 29991299
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa-caataataacaacacctagatctaat 187  Q
    ||||||||||||| ||||||||||||||||||  |||||||  ||    |||||| || || ||| ||||||||||||||||||||||    
T  29991382 atgatgtgtggagcaaagaaaagtagtaaccaatatcaaagtgag----cacaagtaataatcaacaataacaacacctagatctaat 29991299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 3259083 - 3259009
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||||||||||| |||||||| |||   |||||||||||||| || | || ||||||||||||||    
T  3259083 aaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaac-aaccctagtttctacccatttt 3259009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 25615937 - 25615867
Alignment:
Q  335 tgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||| |||||||||||||||| |||   ||| |||| ||||| |||| |||||||||||||||||    
T  25615937 tgatacaaatgggttacaagaaattagcttaaacaagcgcacatagaac-aaacctaatttctacccatttt 25615867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 31732768 - 31732839
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacacca--ataaataatgatgtgtggagtaaagaaaagtagtaacca 132  Q
    ||||||||||| ||||||||| |||||||||  | |||  ||||||||||||| |||  |||||||||||||    
T  31732768 tgttgtgaattcggactcaaaactcacaccagtacaaactatgatgtgtggagcaaatgaaagtagtaacca 31732839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 48489798 - 48489720
Alignment:
Q  64 gttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 141  Q
    |||||||||| |||||||||  |||||||||||  ||  ||||||||||||| |||| |||||||||||||  |||||||    
T  48489798 gttgtgaattcggactcaaaa-tcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaag 48489720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 274 - 413
Target Start/End: Original strand, 14521690 - 14521828
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| |||| |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  14521690 ttcggtccaatatgacctactctcgaggagagagcacctctccaattcaataagatgaaagtgatacaaatgagttacaa-aaattagcacaagagctca 14521788  T
Q  374 caaagaacaaaacttaatttctacccatttttcatctcac 413  Q
    ||||||||| ||| |||||||||| |||||||||| ||||    
T  14521789 caaagaacacaacctaatttctacacatttttcatgtcac 14521828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 282 - 405
Target Start/End: Complemental strand, 31077014 - 31076891
Alignment:
Q  282 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaac 381  Q
    ||||| |||| ||||  |||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||||||    
T  31077014 aatatgacctactctctaggagatagcagctctccaatccactaagataaaagtgatacaaatgggttacaataaattagcttaagagttcacaaagaac 31076915  T
Q  382 aaaacttaatttctacccattttt 405  Q
    || || |||||| || ||||||||    
T  31076914 aagacctaatttttatccattttt 31076891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 10077252 - 10077115
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||||||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| ||||||  ||||||||||||||||| ||      
T  10077252 acccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaaaagttacaagaaattagcttata 10077153  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttt 404  Q
    |||| || ||||||||| || |||||||||||||||||    
T  10077152 agcttacaaaagaacaagacctaatttctacccatttt 10077115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 5572328 - 5572191
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||||||||||| ||||| ||||  ||| | |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  5572328 acccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 5572229  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||| ||||||    
T  5572228 agcttacacaagaacaagacctaatttctacgcatttt 5572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 21801405 - 21801294
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatt 392  Q
    ||||| |||| ||||| ||||||||||||||||||| |||||| |||||| |||||||||||||||| | ||  |||| || ||||||||| ||||||||    
T  21801405 tctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaaagaacaagacttaatt 21801306  T
Q  393 tctacccatttt 404  Q
    ||||||||||||    
T  21801305 tctacccatttt 21801294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 31979523 - 31979661
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| || |  ||||| |||||||||| | |||||||||||||||||||||||| | |||| |||||||||||||||| | ||      
T  31979523 acccagttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaagaaattaacttata 31979622  T
Q  368 agctcac-aaagaacaaaacttaatttctacccattttt 405  Q
    |||| || ||||||||| || ||||||||||||||||||    
T  31979623 agcttacaaaagaacaagacctaatttctacccattttt 31979661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 31086528 - 31086423
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 398  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| ||| |||| ||| || |||||||||||    
T  31086528 ggagagagcaactctccaatccactatgatgaaagtgttacaaaggagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacc 31086429  T
Q  399 catttt 404  Q
    ||||||    
T  31086428 catttt 31086423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 404
Target Start/End: Original strand, 18232862 - 18232992
Alignment:
Q  275 tcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac 374  Q
    |||||| ||||| ||||  ||||| |||||||||| | ||||||| ||||| |||||||||| |||||| |||||||||||||| ||| ||  |||| ||    
T  18232862 tcggtccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaagaaatcagcttataagcttac 18232961  T
Q  375 a-aagaacaaaacttaatttctacccatttt 404  Q
    | |||||||| || |||||||||||||||||    
T  18232962 acaagaacaagacctaatttctacccatttt 18232992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 405
Target Start/End: Complemental strand, 24436061 - 24435920
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 364  Q
    |||||||| |||| || ||||| |||| |||| | |||||||||| | |||| |||||||| ||||||| || ||||||||| ||||||||||||||| |    
T  24436061 gtaacccagttcgatccaatatgacctactctaggggagagagcagccctccgatccactaggatgaaaatgttacaaatgaattacaagaaattagctt 24435962  T
Q  365 aagagctcac-aaagaacaaaacttaatttctacccattttt 405  Q
    |  |||| || ||| ||||| || ||||||||||||||||||    
T  24435961 ataagcttacaaaaaaacaagacctaatttctacccattttt 24435920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 5757565 - 5757430
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  5757565 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 5757467  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| | | |||||||| || ||||||||||||||||    
T  5757466 agcttatacaagaacaagacctaatttctacccattt 5757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 14521477 - 14521607
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagta----gtaaccacaatcaaagcaagcaatcacaagc 156  Q
    |||||||||||| ||||||||| ||||||||||| |||  ||||||||||||| |||||||||||    |||||||   |||||| || ||    |||||    
T  14521477 ttgttgtgaattcggactcaaaactcacaccaatgaaactatgatgtgtggagcaaagaaaagtacgtagtaaccaatttcaaagtaaaca----caagc 14521572  T
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||| |||||||||||||||||||||||    
T  14521573 aacaacaataacaacaacacctagatctaatctag 14521607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 4629998 - 4630101
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctaccca 400  Q
    |||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||| | ||  |||| || ||||||||| || ||||||||||| |    
T  4629998 agagagcagctctccaatccactaagatgaaagtgttacaaaatagttacaagaaattaacttataagcttacaaaagaacaagacctaatttctaccta 4630097  T
Q  401 tttt 404  Q
    ||||    
T  4630098 tttt 4630101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 405
Target Start/End: Original strand, 27165700 - 27165831
Alignment:
Q  275 tcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa-ttagcataagagctca 373  Q
    |||||| ||||| |||| || ||| ||| |||| | | |||||||| |||||||||||||||||||||  | ||||||| ||| |||||||||||||| |    
T  27165700 tcggtccaatatgacctactatgggggacagagtagccctccaatcaactaagatgaaagtgatacaacggggttacaaaaaaattagcataagagctta 27165799  T
Q  374 caaagaacaaaacttaatttctacccattttt 405  Q
     | ||||||||||| |||||||| ||||||||    
T  27165800 tagagaacaaaactgaatttctatccattttt 27165831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 357
Target Start/End: Original strand, 21356046 - 21356134
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||| ||| || |||||||||||||    
T  21356046 acccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaa-gagttacaagaaa 21356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 405
Target Start/End: Original strand, 22963741 - 22963846
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 399  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  | || ||| | |||||  | ||||||||||||    
T  22963741 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataaccttacacaaaacaagccgtaatttctaccc 22963840  T
Q  400 attttt 405  Q
    ||||||    
T  22963841 attttt 22963846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 405
Target Start/End: Complemental strand, 23824652 - 23824547
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 399  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  | || ||| | |||||  | ||||||||||||    
T  23824652 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataaccttacacaaaacaagccgtaatttctaccc 23824553  T
Q  400 attttt 405  Q
    ||||||    
T  23824552 attttt 23824547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 3038766 - 3038849
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaat 187  Q
    ||||||||| ||| |||| |||||| ||||||  |||||||||| |||   |||| |||||||||||||||||||||||||||||||    
T  3038766 atgatgtgtcgagcaaaggaaagtaataaccaatatcaaagcaaacaa---caagtaacaacaataataacaacacctagatctaat 3038849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 407
Target Start/End: Complemental strand, 1115159 - 1115052
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccc 399  Q
    ||||||||||  |||||||||||||| ||| | | ||||||||||  |||||||||||| | | ||| |||||| ||| |||||| | ||||||||| ||    
T  1115159 ggagagagcagatctccaatccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctcaaaaataacaaaccctaatttctatcc 1115060  T
Q  400 atttttca 407  Q
    ||||||||    
T  1115059 atttttca 1115052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 16569106 - 16569047
Alignment:
Q  347 gttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||||||||||||| |||   ||||||||||||||||||| |||||||||||||||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccatttt 16569047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 33160236 - 33160276
Alignment:
Q  151 acaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  33160236 acaagcaacaacaatattaacaacacctagatctaatctag 33160276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 405
Target Start/End: Original strand, 99244 - 99303
Alignment:
Q  346 agttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccattttt 405  Q
    ||||||||||||||||| ||  |||||||| ||||||||  |||||||||||||||||||    
T  99244 agttacaagaaattagcttagaagctcacagagaacaaactttaatttctacccattttt 99303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 407
Target Start/End: Complemental strand, 30518165 - 30518076
Alignment:
Q  318 atccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||||||| ||| | |||||||||||   |||||| |||| || | ||| || |||||||||||||| ||||||||||||| ||||||||    
T  30518165 atccactatgataagagtgatacaaagaggttacatgaaactaacttaaaagttcacaaagaacaaaccttaatttctacctatttttca 30518076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 22709054 - 22709102
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  22709054 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 31936603 - 31936671
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||||| ||||| ||||  |||||  ||||||||| |||||||||||||||| ||||||||| |||||    
T  31936603 ttcggtccaatatgacctagtctgggagagagagcagctctccaatccactaatatgaaagtgttacaa 31936671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 5406042 - 5406073
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaacca 132  Q
    ||||||||||||||||||||||||||||||||    
T  5406042 atgatgtgtggagtaaagaaaagtagtaacca 5406073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 5410367 - 5410398
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaacca 132  Q
    ||||||||||||||||||||||||||||||||    
T  5410367 atgatgtgtggagtaaagaaaagtagtaacca 5410398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 5674831 - 5674769
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  5674831 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 5674769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 28137494 - 28137562
Alignment:
Q  337 atacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||| |||||||||||||||| |||   |||||||||||||| || | |||||||||||||||||    
T  28137494 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttt 28137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 33211074 - 33211115
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||    
T  33211074 cacaagcaataacaacaataataacacctagatctaatctag 33211115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 22424917 - 22424983
Alignment:
Q  341 aaatgagttacaagaaattagcataag--agctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    ||||| |||||||||||||||| |||   ||||||||||||||||  || ||||||||||||||||||    
T  22424917 aaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccct-aatttctacccatttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 9e-40; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 266 - 405
Target Start/End: Complemental strand, 17345607 - 17345469
Alignment:
Q  266 taacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcata 365  Q
    ||||||| ||||||||||||| |||| |||||| ||| |||| | |||||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  17345607 taacccagttcggtctaatatgacctactctgg-ggaaagaggagctctccaatccactaagatgaacgtggtacaaatgtgctacaagaaattagcata 17345509  T
Q  366 agagctcacaaagaacaaaacttaatttctacccattttt 405  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  17345508 agagcccacaaagaacaaaacctaatttctacccattttt 17345469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 19072938 - 19073075
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||      
T  19072938 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttata 19073037  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttt 404  Q
    |||| || ||||||||| || |||||||||||||||||    
T  19073038 agcttacaaaagaacaatacctaatttctacccatttt 19073075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 19120828 - 19120965
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||      
T  19120828 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttata 19120927  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttt 404  Q
    |||| || ||||||||| || |||||||||||||||||    
T  19120928 agcttacaaaagaacaatacctaatttctacccatttt 19120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 407
Target Start/End: Original strand, 22819435 - 22819578
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggagg-agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagca 363  Q
    ||||||||||| |||| ||||| |||| |||||| || |||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  22819435 gtaacccaatttggtccaatatgacctactctggggggagagagtagccctccaatccaccaagatgaaagtgatacaaatgagttacaagaaattagct 22819534  T
Q  364 taagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |   ||||||||||||| || || ||||||||| ||||||||||    
T  22819535 ttttagctcacaaagaataagacataatttctaaccatttttca 22819578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 407
Target Start/End: Complemental strand, 9023883 - 9023787
Alignment:
Q  311 ctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||| || || ||||||||||||| ||||||    
T  9023883 ctctccaatccactaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcacaaagaataagacctaatttctacccacttttca 9023787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 47704023 - 47703886
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| || ||||||||||||||| ||      
T  47704023 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttaca 47703924  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  47703923 agcttacacaagaacaagacctaatttctacccatttt 47703886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 16124597 - 16124466
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  |||| |    
T  16124597 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagctta 16124498  T
Q  374 ca-aagaacaaaacttaatttctacccatttt 404  Q
    || |||||||| || |||||||||||||||||    
T  16124497 cataagaacaagacctaatttctacccatttt 16124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 13137780 - 13137906
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||| |||| ||||||||| ||||||||||||  ||| ||||||||||||| |||| |||||||||||||   |||||| || ||    |||||||||    
T  13137780 tgttgtaaattcggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaatttcaaagtaaaca----caagcaaca 13137875  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  13137876 acaataataacaacacctagatctaatctag 13137906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 27104453 - 27104365
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||||| ||||||||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  27104453 ttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagc 27104365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 13598408 - 13598545
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | || |||||||||| |||||||||| |||||| ||| |||||||||||||| ||      
T  13598408 acccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttata 13598507  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| ||||||||||||| ||||||    
T  13598508 agcttacacaagaacaagacttaatttctactcatttt 13598545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 29651821 - 29651958
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| || ||||||||||||| | ||      
T  29651821 acccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaagaattacaagaaattaacttata 29651920  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  29651921 agcttacacaagaacaagacctaatttctacccatttt 29651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 45644158 - 45644284
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  |||||| |||| | |  ||||||||||||| |||| |||||||||||||  |||||||||| |||   |||||||||    
T  45644158 tgttgtgaattcggactcaaaa-tcacacaaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaaca 45644253  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||| |||||||||||||||    
T  45644254 acaataataacaacatctagatctaatctag 45644284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 47098911 - 47098775
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| |||   ||||| |||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||      
T  47098911 acccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttata 47098813  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttt 404  Q
    |||| || |||||||||  | |||||||||||||||||    
T  47098812 agcttacaaaagaacaagtcctaatttctacccatttt 47098775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 28223220 - 28223347
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||| ||||||| | |  ||||||||||||| |||  |||||||||||||  |||||||  | ||    ||||||||    
T  28223220 ttgttgtgaattcggactcaaaactcagaccaatacaaactatgatgtgtggagcaaacgaaagtagtaaccaatatcaaagtgaaca----caagcaac 28223315  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  28223316 aacaataataacaacacctagatctaatctag 28223347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 9476271 - 9476408
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| ||||||||||||||| |||||||||  |||||| |||||| ||||||||||| ||      
T  9476271 acccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaagagttataagaaattagcttaca 9476370  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || ||||||||| |||||||    
T  9476371 agcttacacaagaacaagacctaatttctatccatttt 9476408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 403
Target Start/End: Original strand, 3281718 - 3281853
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||| | |||||||||| |||||| ||||||||||||| |||| |       
T  3281718 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 3281816  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  3281817 agcttacacaagaacaagacctaatttctacccattt 3281853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 26644984 - 26644849
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||||||||||| || |||||||||| |||||| ||||||||||||| |||| |       
T  26644984 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 26644886  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  26644885 agcttacacaagaacaagacctaatttctacccattt 26644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 28220025 - 28220152
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||| | |  ||||||||||||  |||||||| |||||||||  || ||||  | ||    ||| ||||    
T  28220025 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggaacaaagaaaattagtaaccaatattaaagtgaaca----caaacaac 28220120  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  28220121 aacaataataacaacacctagatctaatctag 28220152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 35109556 - 35109485
Alignment:
Q  336 gatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||||||||  |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||    
T  35109556 gatacaaataggttacaagaaattagcttaaaagctcacaaagaacaaaccttaatttctacccaattttca 35109485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 196710 - 196835
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| | |||||||| |||||||||||  ||| ||||||||||||| |||| ||| |||||||||  |||||||  | ||    |||||||||    
T  196710 tgttgtgaattcgtactcaaat-tcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaaccaatatcaaagtgaaca----caagcaaca 196804  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||| |||||||||||    
T  196805 acaataataacaacacctacatctaatctag 196835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 1833876 - 1833751
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||| | ||||||||||| | |  ||||| |||||||||||| ||||| |||||||   |||||| || ||    |||||||||    
T  1833876 tgttgtgaattcggactcaa-tatcacaccaatacaaactatgatctgtggagtaaaggaaagtcgtaaccaatttcaaagtaaaca----caagcaaca 1833782  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  1833781 acaataataacaacacctagatctaatctag 1833751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 413
Target Start/End: Original strand, 32889455 - 32889595
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcataagagctc 372  Q
    ||||||| ||||| ||||  ||||| ||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| |   ||||     
T  32889455 ttcggtccaatatgacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagctt 32889553  T
Q  373 aca-aagaacaaaacttaatttctacccatttttcatctcac 413  Q
    ||| ||||||||  | ||||||||||||||||||||| ||||    
T  32889554 acacaagaacaagtcctaatttctacccatttttcatatcac 32889595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 50167019 - 50167105
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||| |||| |||||||||||||  ||||    ||| || |||||| |||||||||||||||||||||||||||||||||||    
T  50167019 atgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagaaacaacaataataacaacacctagatctaatctag 50167105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 30476247 - 30476371
Alignment:
Q  64 gttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 161  Q
    |||||||||| | ||||||| |||||||||||| | |  || ||||||||||||||| |||||||||||||   |||||| || ||    ||||||||||    
T  30476247 gttgtgaattcgaactcaaaactcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaatttcaaagtaaaca----caagcaacaa 30476342  T
Q  162 caataataacaacacctagatctaatcta 190  Q
    ||||||||||||||| |||| ||||||||    
T  30476343 caataataacaacacttagacctaatcta 30476371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 775682 - 775757
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaa 343  Q
    ||||||||||||| ||||| ||||  ||||| |||||||| | |||||||||||||||||||||||||| ||||||    
T  775682 acccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaa 775757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 4552447 - 4552574
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||| ||||| |||||||||| ||||||||||| | |  |||||| ||| ||||||| |||||||||||||   |||||| || ||    |||| |||    
T  4552447 ttgttgcgaattcggactcaaatttcacaccaatacaaactatgatgcgtgaagtaaaggaaagtagtaaccaatttcaaagtaaaca----caagtaac 4552542  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||| ||||||||||||||    
T  4552543 aacaataataacaacacatagatctaatctag 4552574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 23555070 - 23555192
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  || ||||||||  || |||||||||||||| ||||||||||||||| ||   |||||| || ||    ||||||||    
T  23555070 ttgttgtgaattcggactcaaaa-tcgcaccaatagaaacaatgatgtgtggagcaaagaaaagtagtaatcaatgtcaaagtaaaca----caagcaac 23555164  T
Q  160 aacaataataacaacacctagatctaat 187  Q
    ||||| ||||||||||||||||||||||    
T  23555165 aacaacaataacaacacctagatctaat 23555192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 407
Target Start/End: Complemental strand, 918538 - 918428
Alignment:
Q  297 ggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttcta 396  Q
    ||||||||||| | |||||||| |||||| ||| | |||||||||||    ||||||||||||| | ||  | ||||||||||||||| | |||||||||    
T  918538 ggaggagagagaaactctccaaaccactatgataagagtgatacaaagatattacaagaaattatcttacaaactcacaaagaacaaaccataatttcta 918439  T
Q  397 cccatttttca 407  Q
    |||||||||||    
T  918438 cccatttttca 918428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 407
Target Start/End: Complemental strand, 11032378 - 11032268
Alignment:
Q  297 ggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttcta 396  Q
    |||||| |||||| || ||  |||||||| ||| | ||||||| |||   |||||||||||||||  ||| | ||||||||||||||||| |||||||||    
T  11032378 ggaggatagagcaactatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacataatttcta 11032279  T
Q  397 cccatttttca 407  Q
    |||||||||||    
T  11032278 cccatttttca 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 21536630 - 21536525
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatt 392  Q
    ||||| |||||||||| |||||||||||||||  ||||||||| |||||| ||||||||||||| |||| |   |||| ||| |||||||| ||||||||    
T  21536630 tctgggggagagagcagctctccaatccactataatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaatacttaatt 21536532  T
Q  393 tctaccc 399  Q
    |||||||    
T  21536531 tctaccc 21536525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 833970 - 834093
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||||| |    
T  833970 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaata 834064  T
Q  161 acaataataacaacacctagatctaatct 189  Q
    |||| |||||||||||| |||||||||||    
T  834065 acaacaataacaacaccaagatctaatct 834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 8550867 - 8550941
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| ||||||||||||||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||    
T  8550867 aaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttt 8550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 45644434 - 45644509
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||||||| |||||||||||| |  |  ||||||||||||||||||||||||||||| |||||||    
T  45644434 aaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaatttctatccatttt 45644509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 407
Target Start/End: Complemental strand, 32737063 - 32736944
Alignment:
Q  288 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 387  Q
    |||| ||||||  ||||||| | |||||  ||| |||| |||||| ||||||||||   ||||||| |||||||| ||| || ||| |||||||||| |     
T  32737063 acctactctgggagagagagaaactctctgatcaactatgatgaaggtgatacaaagaggttacaaaaaattagcttaaaagttcataaagaacaaaccc 32736964  T
Q  388 taatttctacccatttttca 407  Q
    ||||||||||||||||||||    
T  32736963 taatttctacccatttttca 32736944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 40122000 - 40122122
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  |||||| |||||| |||| |||||||||||||  ||| |||  | ||    ||||||||    
T  40122000 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgcgtggagcaaaggaaagtagtaaccaatatctaagtgaaca----caagcaac 40122094  T
Q  160 aacaataataacaacacctagatctaat 187  Q
    ||||||||||||||||||||||||||||    
T  40122095 aacaataataacaacacctagatctaat 40122122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 46065195 - 46065156
Alignment:
Q  151 acaagcaacaacaataataacaacacctagatctaatcta 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46065195 acaagcaacaacaataataacaacacctagatctaatcta 46065156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 28265359 - 28265484
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||| ||||| |||||||||  ||||||||||| | |  |||||||||||||||||| ||| ||||| |||  |||||||  | ||    |||||||||    
T  28265359 tgttgggaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagtaaaggaaaatagtagccaatatcaaagtgaaca----caagcaaca 28265453  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||| |||||||||||||||    
T  28265454 acaataataacaacatctagatctaatctag 28265484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 406
Target Start/End: Original strand, 40122278 - 40122354
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    |||||||||||||||||||| ||||||||||| |||   ||||||||||||||||| | ||||||| |||||||||||    
T  40122278 aaagtgatacaaatgagttataagaaattagcttaaacaagctcacaaagaacaaatc-taatttcgacccatttttc 40122354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 41361279 - 41361153
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat-aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    |||||||||||| ||||||||| |||  |||||| |||  ||||||||||||| |||| |||||| ||| ||  ||||    ||| || |||||| ||||    
T  41361279 ttgttgtgaattcggactcaaaactctaaccaataaaactatgatgtgtggagcaaaggaaagtattaatcaatatca----aagtaaacacaagtaaca 41361184  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||| |||||||||||||| |||||||||||    
T  41361183 acaacaataacaacacctatatctaatctag 41361153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 8550583 - 8550710
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    |||  | |||||||||     
T  8550583 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaagcaat 8550677  T
Q  160 aa-caataataacaacacctagatctaatctag 191  Q
    || ||| ||||||||||||||||||||||||||    
T  8550678 aatcaacaataacaacacctagatctaatctag 8550710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 47102928 - 47102837
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaatta 360  Q
    ||||| ||||||| ||||| ||||  ||| | |||||||||| |  |||||||||||||||||||| || ||| |||||||||||||||||||    
T  47102928 acccagttcggtccaatatgacctaatctaggggagagagcagccatccaatccactaagatgaaaatgttac-aatgagttacaagaaatta 47102837  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 24202830 - 24202768
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  24202830 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 24202768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 31659607 - 31659480
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaataat--gatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |||  ||||||||||| ||||||||||||||||||  ||||||  | |  | |||||||||     
T  31659607 ttgttgtgaattcggactcaaaa-tcacaccaatataaaatatgatgtgtggagaaaagaaaagtagtaaccaatatcaaa--atg--aacacaagcaat 31659513  T
Q  160 aa-caataataacaacacctagatctaatctag 191  Q
    || ||| ||||||||||||| ||||||||||||    
T  31659512 aatcaacaataacaacaccttgatctaatctag 31659480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 403
Target Start/End: Complemental strand, 40816844 - 40816765
Alignment:
Q  325 aagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccattt 403  Q
    |||||||||||| |||||| |||||||||||||||||| ||  |||| || ||||||||| || |||||||||| |||||    
T  40816844 aagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcattt 40816765  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 48382524 - 48382441
Alignment:
Q  312 tctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttct 395  Q
    ||||||||||| || ||||||||||||||||||  |||||||||||||| | ||  || ||||||||| |||| | ||||||||    
T  48382524 tctccaatccaatatgatgaaagtgatacaaataggttacaagaaattaacttacaagttcacaaagatcaaaccctaatttct 48382441  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 3846960 - 3847045
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaat 187  Q
    |||||||||||||||||| |||||||||||||  |||||||  | ||    ||| |||||| |||||||||||||||||||||||||    
T  3846960 atgatgtgtggagtaaaggaaagtagtaaccaatatcaaagtgaacacaagcaa-caacaataataataacaacacctagatctaat 3847045  T

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Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 10997031 - 10997105
Alignment:
Q  333 agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||  |||||||||||||| | ||| || | ||||| |||||| | ||||||||||||||||||||    
T  10997031 agtgatacaaatatgttacaagaaattaacttaaaagataacaaataacaaaccctaatttctacccatttttca 10997105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 37559663 - 37559744
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacacca--ataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 141  Q
    |||||||||||| ||||||||| |||||||||  |||||  ||||||| ||||| |||| |||||||||||||  |||||||    
T  37559663 ttgttgtgaattcggactcaaaactcacaccaatataaactatgatgtctggagcaaaggaaagtagtaaccaatatcaaag 37559744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 13604678 - 13604622
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| ||||||| || |||||| |||||||||||||    
T  13604678 ggagagagcagctctccaatccactatgatgaaaatgttacaaa-gagttacaagaaa 13604622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 19358898 - 19358842
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  19358898 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 19361487 - 19361431
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  19361487 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 19380127 - 19380071
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  19380127 ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 50169099 - 50169140
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  50169099 cacaaacaacaacaataataacaacacctatatctaatctag 50169140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 927785 - 927862
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 141  Q
    ||||||||||| |||||||||  ||||| |||||||  ||||||||||||||||||  |||| |||||||  |||||||    
T  927785 tgttgtgaattcggactcaaaa-tcacatcaataaactatgatgtgtggagtaaagggaagtggtaaccaatatcaaag 927862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 3189607 - 3189573
Alignment:
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||| ||||||||||||||||||||    
T  3189607 aacaacaataataataacacctagatctaatctag 3189573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 3198424 - 3198390
Alignment:
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||| ||||||||||||||||||||    
T  3198424 aacaacaataataataacacctagatctaatctag 3198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 3207263 - 3207229
Alignment:
Q  157 aacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||| ||||||||||||||||||||    
T  3207263 aacaacaataataataacacctagatctaatctag 3207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 8281378 - 8281444
Alignment:
Q  318 atccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaa 384  Q
    |||||||| ||| | | ||||||||||  |||||||||||||| |||||  ||||||||||||||||    
T  8281378 atccactatgataagaatgatacaaatatgttacaagaaattaacataatcgctcacaaagaacaaa 8281444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 196988 - 197062
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| ||||||||||||||||||||||||| | |||   |||||||||||||| || | ||||||||||| |||||    
T  196988 aaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaac-aaccctaatttctaccaatttt 197062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 834247 - 834321
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| || | ||||||||| |||||||    
T  834247 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctatccatttt 834321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 16455897 - 16455861
Alignment:
Q  153 aagcaacaacaataataacaacacctagatctaatct 189  Q
    |||||||||||||||||||||||  ||||||||||||    
T  16455897 aagcaacaacaataataacaacatatagatctaatct 16455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 46065006 - 46064951
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaa 384  Q
    |||| |||||| |||||||||||||||||||| |  | ||||||||||||||||||    
T  46065006 aaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaa 46064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 11181923 - 11181782
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctct-ggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagca 363  Q
    |||||| | ||||||||||||| |||| |||| || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11181923 gtaacctagttcggtctaatatgacctactctagggggagagagcaaccctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcc 11181824  T
Q  364 taagagctcacaaa-gaacaaaacttaatttctacccatttt 404  Q
    ||| ||||| |||| |||||| || |||||||||||||||||    
T  11181823 taaaagctctcaaatgaacaagacctaatttctacccatttt 11181782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 274 - 407
Target Start/End: Complemental strand, 33031021 - 33030888
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| || | |||||| |||||||||| ||||||||| |||||||||||||||||| |||  | |||||||||||||||| ||| ||||||    
T  33031021 ttcggtcaaatatgacatactctgggggagagagcagctctccaattcactaagatgaaagtgatgcaatggggttacaagaaattagcttaaaagctca 33030922  T
Q  374 caaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||| ||||||||||||||||||||    
T  33030921 caaagaacaaaacataatttctacccatttttca 33030888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 10281761 - 10281898
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  10281761 acccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaca 10281860  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  10281861 agcttacacaagaacaagacctaatttctacccatttt 10281898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 293 - 407
Target Start/End: Original strand, 6741887 - 6742001
Alignment:
Q  293 ctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatt 392  Q
    |||||| ||| |||||| |||||||||||| ||||||| ||||||||||||  ||||||||||||||||| |   | ||||||||||||||||| |||||    
T  6741887 ctctgggggatagagcagctctccaatccattaagatggaagtgatacaaagaagttacaagaaattagcttgcaaactcacaaagaacaaaacctaatt 6741986  T
Q  393 tctacccatttttca 407  Q
    ||||| |||||||||    
T  6741987 tctactcatttttca 6742001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 28750455 - 28750581
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| ||||||||| ||||||||||||  ||| ||||||||||||| |||| |||||||||||||   | |||| || ||    |||||||||    
T  28750455 tgttgtgaatttggactcaaaactcacaccaatacaaattatgatgtgtggagcaaaggaaagtagtaaccaattttaaagtaaaca----caagcaaca 28750550  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||||    
T  28750551 acaataataacaacacctagatctaatctag 28750581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 42127497 - 42127352
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| |||| |||||||| ||||  ||||| |||||||||| | | |||||||||||||||||||||| ||| ||||||||||||||||||||| ||      
T  42127497 acccagttcgatctaatatgacctaatctgggggagagagcagccccccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttata 42127399  T
Q  368 agctcac-aaagaacaaaacttaatttctacccatttttcatctcac 413  Q
    |||| || |||||||||  | || |||||||||||||||||| ||||    
T  42127398 agcttacaaaagaacaagtcctactttctacccatttttcatatcac 42127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 7160958 - 7160861
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctac 397  Q
    ||||||| || |||||||||||||| |||||||||||||||||| | ||||||| |||||||  | | |||||||||||||||| |||||||||||||    
T  7160958 ggagagatcagctctccaatccactcagatgaaagtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagacttaatttctac 7160861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 3880343 - 3880446
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 400  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||  ||  |||| ||| |||||||| || |||||||||||||    
T  3880343 agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacacaagaacaagacctaatttctaccca 3880442  T
Q  401 tttt 404  Q
    ||||    
T  3880443 tttt 3880446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 413
Target Start/End: Original strand, 28832275 - 28832412
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  ||  ||    
T  28832275 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagtaca 28832373  T
Q  374 caaagaacaaaacttaatttctacccatttttcatctcac 413  Q
     |||||||||    ||||||||||||||||||||| ||||    
T  28832374 -aaagaacaagttctaatttctacccatttttcatatcac 28832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 403
Target Start/End: Complemental strand, 12084228 - 12084127
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 400  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||| | ||| |||| ||| |||||||| || |||||||||||||    
T  12084228 agagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattaacttaaaagcttacacaagaacaagacctaatttctaccca 12084130  T
Q  401 ttt 403  Q
    |||    
T  12084129 ttt 12084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 407
Target Start/End: Original strand, 2630247 - 2630380
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctca 373  Q
    ||||||| ||||| |||| || ||  ||||| |||| |||| |||||||||| ||||||||||||||||| | ||||||| |||||||| ||| | | ||    
T  2630247 ttcggtccaatatgacctgctttgagggagatagcagctcttcaatccactatgatgaaagtgatacaaaagggttacaataaattagcttaaaaacaca 2630346  T
Q  374 caaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||| |||||| ||  |||||||||    
T  2630347 caaagaacaaaacctaatttttatacatttttca 2630380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 13488569 - 13488443
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||||||||||||||  |||  |||||||||||||||||| |||||| ||||||   |||    |||  | ||||| ||| |    
T  13488569 tgttgtgaattcggactcaaatctcacaccaatacaaaatatgatgtgtggagtaaaggaaagtaataaccaatttca----aagtgaacacaatcaata 13488474  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
     ||||||||||||||||||||||||||||||    
T  13488473 gcaataataacaacacctagatctaatctag 13488443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 9353419 - 9353331
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  9353419 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 9353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 11917059 - 11916922
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| |||||||||||||||  ||||||||| |||||| ||||||||||||| |||  |       
T  11917059 acccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaaatagtttgca 11916960  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  11916959 agcttacacaagaacaagacctaatttctacccatttt 11916922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 19588788 - 19588893
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 398  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||| | ||  |||| ||| |||||||| || |||||||||||    
T  19588788 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctacc 19588887  T
Q  399 catttt 404  Q
    | ||||    
T  19588888 cttttt 19588893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 36932437 - 36932349
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  36932437 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 36932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 538387 - 538263
Alignment:
Q  65 ttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 162  Q
    |||||||||  |||||||| |||||||||||| | |  ||||||||||||| |||| |||||| ||||||   |||||| || ||    |||||||||||    
T  538387 ttgtgaattcagactcaaaactcacaccaatataaactatgatgtgtggagcaaaggaaagtaataaccaatttcaaagtaaaca----caagcaacaac 538292  T
Q  163 aataataacaacacctagatctaatctag 191  Q
    ||||||||||||| |||||||||||||||    
T  538291 aataataacaacatctagatctaatctag 538263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 17004047 - 17003911
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| |||| |||||||||| |||||||||  | |||| ||||||||| |||||| | ||      
T  17004047 acccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaagagttacaaaaaattaacttaca 17003948  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  17003947 agcttacacaagaacaagacctaatttctacccattt 17003911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 42428244 - 42428356
Alignment:
Q  77 actcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaac 174  Q
    ||||||| |||||||||||| | |  ||||||||||||| |||| |||||||||||||  |||||||  | ||    |||||||||| ||||||||||||    
T  42428244 actcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaacaataataataacaac 42428339  T
Q  175 acctagatctaatctag 191  Q
    |||||||||||||||||    
T  42428340 acctagatctaatctag 42428356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 5887234 - 5887360
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||| ||||||| |||| |||||||||||||  |||||||  | ||    ||||||||    
T  5887234 ttgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatatgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaac 5887328  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||| |||||||||||    
T  5887329 aacaataataacaacacctaaatctaatctag 5887360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 42426034 - 42426161
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| | ||||||| ||||||| |||| | |  ||||||||||||| |||  |||||||||||||  |||||||  | ||    ||||||||    
T  42426034 ttgttgtgaattcgaactcaaaactcacacaaatacaaactatgatgtgtggagcaaaagaaagtagtaaccaatatcaaagtgaaca----caagcaac 42426129  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    | ||||||||||||||||||||||||||||||    
T  42426130 atcaataataacaacacctagatctaatctag 42426161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 30682719 - 30682849
Alignment:
Q  60 agttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagca 157  Q
    |||||||||||||  ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  ||||    |||  | ||||||||    
T  30682719 agttgttgtgaatacggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaagca 30682814  T
Q  158 acaa-caataataacaacacctagatctaatctag 191  Q
    | || ||| ||||||||||||||||||||||||||    
T  30682815 ataatcaacaataacaacacctagatctaatctag 30682849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 31183342 - 31183216
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| ||||||||||| |  |||||||   | || ||||||||||    
T  31183342 ttgttgtgaattcggactcaaaa-tcacaccaatacaaaccatgatgtgtggagcaaaggaaagtagtaactaatatcaaag---ggaa-cacaagcaac 31183248  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    || ||||||||||||||||| |||||||||||    
T  31183247 aaaaataataacaacacctatatctaatctag 31183216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 13240080 - 13239994
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||| |||||||||||||   | |||| || ||    ||||||||||||| ||||||||||||||||||||||||||    
T  13240080 atgatgtgtggagtaaaggaaagtagtaaccaattttaaagtaaaca----caagcaacaacaacaataacaacacctagatctaatctag 13239994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 357
Target Start/End: Original strand, 15464542 - 15464630
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| | ||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  15464542 acccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 15464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 403
Target Start/End: Original strand, 14520240 - 14520375
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||| | || ||||||| |||| |||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  14520240 acccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 14520338  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  14520339 agcttacacaagaacaagacctaatttctacccattt 14520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 32637190 - 32637066
Alignment:
Q  65 ttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaac 162  Q
    ||||||||| ||| ||||| |||||||||||| | |  |||||||||||||||||| ||||||||||| |   ||| |  || ||    ||||||||| |    
T  32637190 ttgtgaattcggattcaaaactcacaccaatacaaactatgatgtgtggagtaaaggaaagtagtaacaaatttcacactaaaca----caagcaacatc 32637095  T
Q  163 aataataacaacacctagatctaatctag 191  Q
    |||||||||||||||||||||||||||||    
T  32637094 aataataacaacacctagatctaatctag 32637066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 534128 - 534013
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||   |||    ||| |  ||||||||||    
T  534128 ttgttgtgaattcggactcaaaactcacaccaatagaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtagacacaagcaac 534033  T
Q  160 aacaataataacaacaccta 179  Q
    || |||||||||||||||||    
T  534032 aataataataacaacaccta 534013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 33831768 - 33831692
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    |||| |||||||||| |||||||||||||||| |||   |||||||||||||| |||| |||||||||||||||||||    
T  33831768 aaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaatttctacccatttttc 33831692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 16649674 - 16649760
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||| |||| |||||||||||||||||||    |||  | |||||| |  | ||||||||||||||||||||||||||||||    
T  16649674 atgatgtgtggagcaaaggaaagtagtaaccacaatca----aagtgaacacaagtagtagcaataataacaacacctagatctaatctag 16649760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 37439425 - 37439384
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  37439425 cacaagcaacaacaataataacaacacctaggtctaatctag 37439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 42927176 - 42927135
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  42927176 cacaagcaacaacaacaataacaacacctagatctaatctag 42927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 38192209 - 38192271
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  38192209 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 38192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 38219434 - 38219496
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  38219434 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 38219496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 24553561 - 24553501
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    |||||||||| | ||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  24553561 ggagagagcagc-ctccactccactaagatgaaagtgttac-aatgagttacaagaaattagc 24553501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 31300683 - 31300595
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||  |||||||| | |||||||||||||||||||||||||| ||  |||||||| |||||||    
T  31300683 acccagttcggtccaatatgacctagtctgagggagagagaaactctccaatccactaagatgaaagtgtta-taatgagttgcaagaaa 31300595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 5887496 - 5887570
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||| ||| |||||||||||| |||   ||||||||||||||||| | ||||||||| |||||||    
T  5887496 aaagtgatacaaatgggttgcaagaaattagcttaaacaagctcacaaagaacaaatc-taatttctatccatttt 5887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 8565841 - 8565876
Alignment:
Q  156 caacaacaataataacaacacctagatctaatctag 191  Q
    |||||| |||||||||||||||||||||||||||||    
T  8565841 caacaataataataacaacacctagatctaatctag 8565876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 8566031 - 8566100
Alignment:
Q  336 gatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||||||| |||||||||||||||| |||   |||||||||||||| |||| ||| |||||||||||||    
T  8566031 gatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaagttctacccatttt 8566100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 24135884 - 24135946
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| || |||||| |||||||||||||||| |||||| | |||||||||||    
T  24135884 tctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaa-gggttacaagaaa 24135946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 28537669 - 28537712
Alignment:
Q  301 gagagagcacctctccaatccactaagatgaaagtgatacaaat 344  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||    
T  28537669 gagagagcagctctccaatccactaagataaaagtgatataaat 28537712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 39468348 - 39468479
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| | ||||||| || ||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    |||  | ||||| ||| |    
T  39468348 tgttgtgaattcgaactcaaaacttacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtgaacacaaacaata 39468443  T
Q  161 a-caataataacaacacctagatctaatctagaaat 195  Q
    | ||| ||||||| ||||||||||||||||||||||    
T  39468444 atcaacaataacagcacctagatctaatctagaaat 39468479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 3075548 - 3075629
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 141  Q
    |||||||||||| ||||| ||| |||||||||||  |||  ||||||||||||| |||| |||||| ||||||  |||||||    
T  3075548 ttgttgtgaattcggactaaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaatatcaaag 3075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 33832007 - 33831921
Alignment:
Q  101 atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||| |||| ||||||||||||| |||||    |||  | ||||||||| ||||| |||| || |||||| |||||||||||    
T  33832007 atgatgtgtggagcaaaggaaagtagtaaccaaaatca----aagtgaacacaagcaataacaacaatagcagcacctaaatctaatctag 33831921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 407
Target Start/End: Original strand, 3651613 - 3651649
Alignment:
Q  371 tcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||||||||||||| | ||||||||||||||||||||    
T  3651613 tcacaaagaacaaaccctaatttctacccatttttca 3651649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 8e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 39774395 - 39774255
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 364  Q
    ||||| || ||||||| ||||| |||| |||||| ||| |||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||| |    
T  39774395 gtaactcagttcggtccaatatgacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaagaaattagctt 39774296  T
Q  365 aagagctcacaaag-aacaaaacttaatttctacccatttt 404  Q
    || ||||||||||| ||||| || ||||||||||| |||||    
T  39774295 aaaagctcacaaagaaacaagacctaatttctaccaatttt 39774255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 265 - 396
Target Start/End: Complemental strand, 1983390 - 1983259
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 364  Q
    |||||||| ||||||| ||||| |||| || ||| ||||| |||| ||||||||||||||| ||| ||||||||||||| | |||||||||||||||| |    
T  1983390 gtaacccagttcggtccaatatgacctactatgggggagatagcagctctccaatccactaggatcaaagtgatacaaaggggttacaagaaattagctt 1983291  T
Q  365 aagagctcacaaagaacaaaacttaatttcta 396  Q
       ||||||||||||||||||| |||||||||    
T  1983290 gcaagctcacaaagaacaaaacataatttcta 1983259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 404
Target Start/End: Original strand, 18377384 - 18377506
Alignment:
Q  283 atataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaag-aac 381  Q
    |||| |||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||| ||||||| ||| ||| ||||||||||| |||    
T  18377384 atatgacctactctggaggagagagcagccctccattccactaagatgaaagtgatacaaatgggttataagaaatcagcttaaaagctcacaaagaaac 18377483  T
Q  382 aaaacttaatttctacccatttt 404  Q
    ||  | |||||||||||||||||    
T  18377484 aagccctaatttctacccatttt 18377506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 10047389 - 10047526
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  10047389 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttata 10047488  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  10047489 agcttacacaagaacaagacctaatttctacccatttt 10047526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 16623380 - 16623243
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||  ||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||  |      
T  16623380 acccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctaata 16623281  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  16623280 agcttacagaagaacaagacctaatttctacccatttt 16623243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 301 - 407
Target Start/End: Original strand, 37781905 - 37782011
Alignment:
Q  301 gagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctaccca 400  Q
    ||||||| | |||||||||||||||  || |||||||||||||   |||||||||||||||| ||| | ||||||||||||||| |||||||||||||||    
T  37781905 gagagagtaactctccaatccactataataaaagtgatacaaagaggttacaagaaattagcttaaaaactcacaaagaacaaatcttaatttctaccca 37782004  T
Q  401 tttttca 407  Q
    |||||||    
T  37782005 tttttca 37782011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 36315316 - 36315181
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  36315316 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaga 36315218  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||| ||| || ||||||||||||||||    
T  36315217 agcttacacaagagcaagacctaatttctacccattt 36315181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 36329525 - 36329390
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||      
T  36329525 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaga 36329427  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||| ||| || ||||||||||||||||    
T  36329426 agcttacacaagagcaagacctaatttctacccattt 36329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 405
Target Start/End: Original strand, 5112244 - 5112384
Alignment:
Q  265 gtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcat 364  Q
    |||||||| ||||||| ||||| | || || ||| || ||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||| |    
T  5112244 gtaacccagttcggtccaatatgatctactttgggggtgagagcagctctccaatccactaatatgaaagtgttacaaatgggttacaagaaattagctt 5112343  T
Q  365 aagagctcacaaagaacaaaacttaatttctacccattttt 405  Q
    || | |||| ||| ||| | || |||||| |||| ||||||    
T  5112344 aaaaactcataaaaaacgagacctaatttgtacctattttt 5112384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 5396758 - 5396623
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||| |       
T  5396758 acccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaa-gagttacaagaaaatagcttgca 5396660  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || ||||||||||||||||    
T  5396659 agcttacacaagaacaagacctaatttctacccattt 5396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 26175436 - 26175562
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| ||||||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||   |||    ||| || ||||||||| |    
T  26175436 tgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaagcaata 26175531  T
Q  161 acaataataacaacacctagatctaatctag 191  Q
     ||||||||||||||||||||||||||||||    
T  26175532 gcaataataacaacacctagatctaatctag 26175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 3796574 - 3796469
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctacc 398  Q
    |||||||||| ||||| ||||||||| |||||||||| |||||| |||||||||||||||||| ||  ||||  || |||||||| || |||||||||||    
T  3796574 ggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacc 3796475  T
Q  399 catttt 404  Q
    ||||||    
T  3796474 catttt 3796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 38152526 - 38152389
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| || |  ||||| |||||||||| ||||||||||||||| | |||||||| |||||| |||||| ||||||||||| ||      
T  38152526 acccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaagagttataagaaattagcttata 38152427  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || ||||||||||| |||||    
T  38152426 agcttacacaagaacaagacctaatttctaccaatttt 38152389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 5872184 - 5872060
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaa 161  Q
    |||||||||||  |||||||||  ||||||||||| | | |||||||||||| |||| |||||||||||||  |||||||  | ||    ||| ||||||    
T  5872184 ttgttgtgaatccggactcaaaa-tcacaccaatacaaactgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caaacaacaa 5872090  T
Q  162 caataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||    
T  5872089 caataataacaacacctagatctaatctag 5872060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 16630741 - 16630673
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||||||||||| || ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  16630741 tctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagc 16630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 42599626 - 42599523
Alignment:
Q  301 gagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctaccc 399  Q
    ||||||||| | ||||||||||||||||||||| || ||| ||||||||||||||||||||| ||  |||| || ||||||||| || ||||||||||||    
T  42599626 gagagagcaaccctccaatccactaagatgaaaatgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctaccc 42599528  T
Q  400 atttt 404  Q
    |||||    
T  42599527 atttt 42599523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 356
Target Start/End: Complemental strand, 34495885 - 34495822
Alignment:
Q  293 ctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaa 356  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  34495885 ctctgggggagagagcagccctccaatccactaagatgaaagtgatacaaatgggttacaagaa 34495822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 46147194 - 46147321
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    ||||||||||||  | |||||| |||||||||||  |||  ||||||||||||| |||| |||||||||||||  |||||||  | ||    ||||||||    
T  46147194 ttgttgtgaattccgcctcaaaactcacaccaatgcaaactatgatgtgtggagcaaaggaaagtagtaaccaatatcaaagtgaaca----caagcaac 46147289  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    |||||||||||||| |||||||||||||||||    
T  46147290 aacaataataacaatacctagatctaatctag 46147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 3777559 - 3777652
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagc 362  Q
    ||||| ||||||| ||||||||||  ||| |||||||||| | ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  3777559 acccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagc 3777652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 36463196 - 36463317
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  |||||| |||| | |  |||||||||||||||||| |||||| ||||||  ||||    ||| || |||||||||||    
T  36463196 tgttgtgaattcggactcaaaa-tcacactaatacaaactatgatgtgtggagtaaaggaaagtaataaccaatatca----aagtaaacacaagcaaca 36463290  T
Q  161 acaataataacaacacctagatctaat 187  Q
    |||||||||||||||||||||||||||    
T  36463291 acaataataacaacacctagatctaat 36463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 39246004 - 39246094
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaat 358  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||| ||||||||||||||    
T  39246004 acccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat 39246094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 45686986 - 45687105
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    ||||||||||||  ||||||||  ||||||||||| | |  ||||||| ||||| |||| |||||||||||||  |||||||||| |||   ||||||||    
T  45686986 ttgttgtgaattcagactcaaaa-tcacaccaatacaaactatgatgtatggagcaaaggaaagtagtaaccaatatcaaagcaaacaa---caagcaac 45687081  T
Q  160 aacaataataacaacacctagatc 183  Q
    ||||||||||||||||||||||||    
T  45687082 aacaataataacaacacctagatc 45687105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 6743470 - 6743366
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacc 398  Q
    |||||||||| | ||||||||||||| |||||||||| |||||| ||| ||||| |||||||| | | |||| || ||||||||| || |||||||||||    
T  6743470 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagctacaaaaaattagc-ttatagcttacaaaagaacaagacctaatttctacc 6743372  T
Q  399 catttt 404  Q
    ||||||    
T  6743371 catttt 6743366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 12743727 - 12743851
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||  |||  ||| ||||||||| |||| |||||||||||||   |||    ||| || ||||||   |    
T  12743727 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgttgtgtggagcaaaggaaagtagtaaccaatttca----aagtaaacacaag---c 12743819  T
Q  160 aacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||    
T  12743820 aacaataataacaacacctagatctaatctag 12743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 24333825 - 24333957
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagct-- 371  Q
    ||||||| ||||| ||||  | ||| |||||||||| ||||||||||||||| |||||| ||| |||||| |||||| || |||||||| ||  ||||      
T  24333825 ttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaagagttataaaaaattagcttacaagctta 24333924  T
Q  372 cacaaagaacaaaacttaatttctacccatttt 404  Q
    |||||  || ||||| |||||||||||||||||    
T  24333925 cacaagaaaaaaaacctaatttctacccatttt 24333957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 36994802 - 36994761
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36994802 cacaagcaacaacaataataacaacacctagatctaatctag 36994761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 34670673 - 34670613
Alignment:
Q  347 gttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    |||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||||||||||    
T  34670673 gttacaagaaattagcttaatagctcacaaagaacaaatcataatttctatccatttttca 34670613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 48893443 - 48893565
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| |||||||||  ||||||||||| | |  ||||||||||||| |||| |||||||||||||  ||||    ||| || ||||||||| |    
T  48893443 tgttgtgaattcggactcaaaa-tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatatca----aagtaaacacaagcaata 48893537  T
Q  161 acaataataacaacacctagatctaatc 188  Q
    |||| ||||||| |||||||||||||||    
T  48893538 acaacaataacagcacctagatctaatc 48893565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 5350269 - 5350199
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaacca 132  Q
    |||||||||||| ||||||||||||||||||||||||    | |||||| ||||||| |||||||||||||    
T  5350269 ttgttgtgaattcggactcaaatctcacaccaataaacttaggtgtgtgaagtaaaggaaagtagtaacca 5350199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 12739352 - 12739473
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| |||||||||||  |||  |||||||||||||||||  |||||||||||||   |||    ||| || ||||||   |    
T  12739352 ttgttgtgaattcggactcaaaactcacaccaatacaaactatgatgtgtggagtaaaagaaagtagtaaccaatttca----aagtaaacacaag---c 12739444  T
Q  160 aacaataataacaacacctagatctaatc 188  Q
    || ||||||||||||||||||||||||||    
T  12739445 aataataataacaacacctagatctaatc 12739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 31474512 - 31474384
Alignment:
Q  63 tgttgtgaattgggactcaaatctcacaccaat--aaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaaca 160  Q
    ||||||||||| ||||||||   ||||||||||  ||| ||||||||||| || |||  |||||||||| ||  ||||    ||| || ||||| |||||    
T  31474512 tgttgtgaattcggactcaa---tcacaccaatacaaacaatgatgtgtgtagcaaatgaaagtagtaatcaatatca----aagtaaacacaaacaaca 31474420  T
Q  161 acaataataacaacacctagatctaatctagaaatt 196  Q
    |||| |||||||||||||||||||||||||| ||||    
T  31474419 acaacaataacaacacctagatctaatctaggaatt 31474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 31985720 - 31985633
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  31985720 acccagttcggtccaatatgacctaatctgg-ggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 31985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 47038213 - 47038341
Alignment:
Q  60 agttgttgtgaattgggactcaaatctcacaccaataaata--atgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagca 157  Q
    ||||| |||||||| |||||||||  ||||||||||| | |  ||||||||||||  |||| |||||||||||||  ||||    ||| || ||||| ||    
T  47038213 agttgctgtgaatttggactcaaaa-tcacaccaatacaaactatgatgtgtggaacaaaggaaagtagtaaccaatatca----aagtaaacacaaaca 47038307  T
Q  158 acaacaataataacaacacctagatctaatctag 191  Q
    | ||||| ||||||||||||||||||||||||||    
T  47038308 ataacaacaataacaacacctagatctaatctag 47038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 54867194 - 54867330
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | || ||||| |||| ||||||| || ||||||  ||||| ||||||||||| ||      
T  54867194 acccagttcggtccaatatgacctagtctgg-ggagagagcagcccttcaatcaactatgatgaaaatgttacaaaatagttataagaaattagcttata 54867292  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| || |||||||||||||||||    
T  54867293 agcttacacaagaacaatacctaatttctacccatttt 54867330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 28468590 - 28468542
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  28468590 tctggaggagagagcagctctccaatccactatgatgaaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 45687267 - 45687337
Alignment:
Q  336 gatacaaatgagttacaagaaattagcat--aagagctcacaaagaacaaaacttaatttctacccatttt 404  Q
    ||||||||||||||| ||||||||||| |  |  ||||||||||||||||||| |||||||| ||||||||    
T  45687267 gatacaaatgagttataagaaattagctttgacaagctcacaaagaacaaaacctaatttcttcccatttt 45687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 4588321 - 4588218
Alignment:
Q  62 ttgttgtgaattgggactcaaat-ctcacaccaataa-ataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| |||||||||  ||||||||||||| |   |||||||||||| |||| ||| |||||||||| ||||    |||||||||||| ||||    
T  4588321 ttgttgtgaattcggactcaaaaactcacaccaataatactttgatgtgtggagcaaaggaaaatagtaaccactatca----aagcaatcacaaacaac 4588226  T
Q  160 aacaataa 167  Q
    ||||||||    
T  4588225 aacaataa 4588218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 5871908 - 5871832
Alignment:
Q  331 aaagtgatacaaatgagttacaagaaattagcataa--gagctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    ||||||||| ||||| ||||||||||||| || |||   |||||||||||||| |||| |||||||||||||||||||    
T  5871908 aaagtgataaaaatgggttacaagaaatttgcttaaacaagctcacaaagaac-aaacctaatttctacccatttttc 5871832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 5147687 - 5147824
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  | ||| |||| ||||| ||||||| |||| || |||||||||| ||||||  |||||||||||| |||| |       
T  5147687 acccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaatagttacaagaaaatagcttgca 5147786  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| ||||||||  | |||||||||||||||||    
T  5147787 agcttacacaagaacaaggcctaatttctacccatttt 5147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 29254777 - 29254736
Alignment:
Q  150 cacaagcaacaacaataataacaacacctagatctaatctag 191  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  29254777 cacaaacaacgacaataataacaacacctagatctaatctag 29254736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 873571 - 873467
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccat 401  Q
    |||||||| |||||| |||||||| ||| | | |||||| |||  |||||||||||||| | ||| ||||| |||| |||||| | |||||||||| |||    
T  873571 agagagcaactctccgatccactatgattagaatgataccaataggttacaagaaattaacttaaaagctcgcaaataacaaatcctaatttctactcat 873472  T
Q  402 ttttc 406  Q
     ||||    
T  873471 atttc 873467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 5269272 - 5269204
Alignment:
Q  274 ttcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||||| ||||| ||||  ||||| |||||||||| | ||||||||||||| |||||||||| |||||    
T  5269272 ttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 9927257 - 9927385
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacacca--ataaataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaac 159  Q
    |||||||||||| ||||||||| ||| |||||  |||||  ||||||||||||| |||| |||||||| ||||  ||||    ||| || |||||||||     
T  9927257 ttgttgtgaattcggactcaaaactcgcaccaatataaactatgatgtgtggagcaaaggaaagtagttaccaatatca----aagtaaacacaagcaat 9927352  T
Q  160 aa-caataataacaacacctagatctaatctag 191  Q
    || ||| ||||||| ||||||||| ||||||||    
T  9927353 aatcaacaataacagcacctagatttaatctag 9927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 53345544 - 53345480
Alignment:
Q  65 ttgtgaattgggactcaaatctcacaccaataaataatgatgtgtggagtaaagaaaagtagtaa 129  Q
    |||||||||  || ||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  53345544 ttgtgaattcagattcaaatctcacaccaataaacttagatgtgtggagtaaagaaaaatagtaa 53345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 6542027 - 6542114
Alignment:
Q  102 tgatgtgtggagtaaagaaaagtagtaaccacaatcaaagcaagcaatcacaagcaacaacaataataacaacacctagatctaatctagaaatt 196  Q
    |||||||||||| |||| |||||| ||||||  ||||||| ||    |||||||||||||||||||   ||| ||||||||||||||||| ||||    
T  6542027 tgatgtgtggagcaaaggaaagtaataaccaatatcaaagtaa----tcacaagcaacaacaataa---caaaacctagatctaatctaggaatt 6542114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 24741976 - 24742038
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  24741976 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 24742038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 29760677 - 29760739
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| |||||||||||| || |||||||||| |||||| | |||||||||||    
T  29760677 tctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 29760739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 52082462 - 52082542
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaata--aataatgatgtgtggagtaaagaaaagtagtaaccacaatcaaag 141  Q
    |||||||||||| |||||||||  |||||||||||  ||| ||||||||||||  |||| |||||||||||||  |||||||    
T  52082462 ttgttgtgaattcggactcaaaa-tcacaccaatacaaattatgatgtgtggaacaaaggaaagtagtaaccaatatcaaag 52082542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 407
Target Start/End: Complemental strand, 18912407 - 18912311
Alignment:
Q  311 ctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttca 407  Q
    ||||||||||||||| ||| | |||||||||||   | |||||||||||||  ||  | ||||||||||||||| | ||| || || ||||||||||    
T  18912407 ctctccaatccactatgataagagtgatacaaaaaggatacaagaaattagtttacaaactcacaaagaacaaaccctaaattatatccatttttca 18912311  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 39593764 - 39593831
Alignment:
Q  293 ctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 361  Q
    |||||| |||||||| | ||||||| | ||||| ||| | |||||||||||| ||||||||||||||||    
T  39593764 ctctgggggagagag-atctctccacttcactatgataagagtgatacaaataagttacaagaaattag 39593831  T

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Target: scaffold0148 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 10739 - 10832
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 361  Q
    ||||| ||||||| ||||| ||||  | ||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10739 acccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattag 10832  T

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Target: scaffold0006 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 5693 - 5830
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| | || |||||||||| |||||||||| |||||| ||| |||||||||||||| ||      
T  5693 acccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttata 5792  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| ||||||||||||| ||||||    
T  5793 agcttacacaagaacaagacttaatttctactcatttt 5830  T

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Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 2502 - 2639
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| |||| || ||||| ||||  ||||| ||||| |||| | ||||||||||||| |||||||||| |||||| || ||| ||||||||||| ||      
T  2502 acccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaagaattataagaaattagcttata 2601  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||||||| |  |||||||||||||||||    
T  2602 agcttacacaagaacaagaactaatttctacccatttt 2639  T

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Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 133335 - 133279
Alignment:
Q  300 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    |||||||||| ||||||||||||||| ||||||| || |||||| |||||||||||||    
T  133335 ggagagagcagctctccaatccactatgatgaaaatgttacaaa-gagttacaagaaa 133279  T

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Target: scaffold0036 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 85693 - 85829
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||| ||| ||||| ||||  ||||| |||||||||  ||||||||||||| | |||||||||| |||||| |||||||||||||||||| |||     
T  85693 acccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaa-gagttacaagaaattagcttaaa 85791  T
Q  368 agctcaca-aagaacaaaacttaatttctacccatttt 404  Q
    |||| ||| |||| ||| || |||||||||||||||||    
T  85792 agcttacacaagagcaagacctaatttctacccatttt 85829  T

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Target: scaffold0140 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 8506 - 8418
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| ||||||| ||||| ||||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||    
T  8506 acccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 8418  T

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Target: scaffold0087 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 44048 - 43913
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| | ||  ||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |       
T  44048 acccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 43950  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| | | |||||||| || ||||||||||||||||    
T  43949 agcttatacaagaacaagacctaatttctacccattt 43913  T

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Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 36919 - 36784
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| ||||| ||||  ||| | | |||||||| ||| |||| |||||| |||||||||| |||||| ||||||||||||| |||| |       
T  36919 acccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgca 36821  T
Q  368 agctcaca-aagaacaaaacttaatttctacccattt 403  Q
    |||| ||| |||||||| || | ||||||||||||||    
T  36820 agcttacacaagaacaagacatgatttctacccattt 36784  T

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Target: scaffold0176 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 17307 - 17410
Alignment:
Q  302 agagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcaca-aagaacaaaacttaatttctaccca 400  Q
    |||||||| | |||||||||| || |||||||||| |||||| |||||||||||||||||| ||  |||| ||| |||||||| || ||||||||||| |    
T  17307 agagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctaccta 17406  T
Q  401 tttt 404  Q
    ||||    
T  17407 tttt 17410  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 407
Target Start/End: Complemental strand, 102553 - 102442
Alignment:
Q  296 tggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttct 395  Q
    |||| |||||| || |||||  |||||| | ||| | |||||||||||   |||||||||||||| | ||| |||||||||| |||||| | ||||||||    
T  102553 tggaagagagaacaactctctgatccacaatgataagagtgatacaaagaggttacaagaaattatcttaaaagctcacaaaaaacaaaccctaatttct 102454  T
Q  396 acccatttttca 407  Q
    ||||||||||||    
T  102453 acccatttttca 102442  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 18013 - 17951
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  18013 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 17951  T

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Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 24106 - 24044
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 357  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  24106 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 24044  T

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Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 16075 - 15937
Alignment:
Q  268 acccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataag 367  Q
    ||||| ||||||| || |||| || || ||||| ||||| || | ||| ||||||||| ||| | ||| |||||||   |||||||||||||||| |||     
T  16075 acccagttcggtccaaaataatctactatggagaagagaacaacactctaatccactatgataagagttatacaaagatgttacaagaaattagcttaaa 15976  T
Q  368 agctcacaaagaacaaaacttaatttctacccatttttc 406  Q
    | | ||||||||||||||| ||||||   ||||||||||    
T  15975 aacccacaaagaacaaaacctaattttcccccatttttc 15937  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 29566 - 29506
Alignment:
Q  282 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| |||| |||| ||||||||| ||  |||| ||||||||||||||||||||||||||    
T  29566 aatatgacctactctagaggagagaacaattctctaatccactaagatgaaagtgatacaa 29506  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 43278 - 43338
Alignment:
Q  282 aatataacctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaa 342  Q
    ||||| |||| |||| ||||||||| ||  |||| ||||||||||||||||||||||||||    
T  43278 aatatgacctactctagaggagagaacaattctctaatccactaagatgaaagtgatacaa 43338  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 10561 - 10515
Alignment:
Q  347 gttacaagaaattagcataagagctcacaaagaacaaaacttaattt 393  Q
    ||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  10561 gttacaataaattagcacaagagctcacaaagaacaaaccctaattt 10515  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 27249 - 27285
Alignment:
Q  62 ttgttgtgaattgggactcaaatctcacaccaataaa 98  Q
    |||||||||||| |||||||||||||||| |||||||    
T  27249 ttgttgtgaattcggactcaaatctcacatcaataaa 27285  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 45289 - 45329
Alignment:
Q  294 tctggaggagagagcacctctccaatccactaagatgaaag 334  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  45289 tctgggggagagagcagctctccaatccactatgatgaaag 45329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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