View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2451_low_6 (Length: 376)
Name: NF2451_low_6
Description: NF2451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2451_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 76 - 371
Target Start/End: Original strand, 45295347 - 45295648
Alignment:
| Q |
76 |
attttatagttgattacatgatgnnnnnnngacatcattagcagcaacactttgagttaactatcaataatcaactaaccattttataattcaatgcact |
175 |
Q |
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| T |
45295347 |
attttatagttgattacatgatgtttttttgacatcattagcagcaacactttgagttaactatcaataatcaactaaccattttataattcaatgaact |
45295446 |
T |
|
| Q |
176 |
atgtgctattacattattattattatt------ggcatacttataatcaaatatcacttnnnnnnnttgatatattttaggcggatgactgaaacagaca |
269 |
Q |
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| T |
45295447 |
atgtgctattacattattattattattattattggcatacttataatcaaatatcactttaaaaaattgatatattttaggtgaatgactgaaacagaca |
45295546 |
T |
|
| Q |
270 |
tatttcatacttattttctacgtgttaaaagagcatttctttgcattattcataatctcatatgactataatatacatgtttgataacatttttcttctc |
369 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
45295547 |
tatttcatacttattttctacgtgttaaaagagcatttctttgcattattcataatctcatatgactataatatacatgtttgataacattttttttctc |
45295646 |
T |
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| Q |
370 |
ac |
371 |
Q |
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|| |
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| T |
45295647 |
ac |
45295648 |
T |
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