View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2452_high_16 (Length: 229)
Name: NF2452_high_16
Description: NF2452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2452_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 5273420 - 5273624
Alignment:
| Q |
1 |
ccacaagcctctacaccagcaccaggtttcaacacagtcccccttgtaccagtaaccccgagtggggcccccaccccaaatattctcccaaaatcaccat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
5273420 |
ccacaagcctctacaccagcaccaggtttcaacacagtcccccttgtaccagtaaccccgagtggggcccccacccctaatattctcccaaaatcaccat |
5273519 |
T |
|
| Q |
101 |
ccatagacattatccaaatcctcnnnnnnnnnnnnngattctcagttctcattcgtcttctcaaaacaactcagttaataaaccaactcaactcacaact |
200 |
Q |
| |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5273520 |
ccatagacattatccaaatcctcaaaaaagcaaaaagattctcagttctcattcgtcttctcaaaacaactcagttaataaaccaactcaactcacaact |
5273619 |
T |
|
| Q |
201 |
agtta |
205 |
Q |
| |
|
||||| |
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|
| T |
5273620 |
agtta |
5273624 |
T |
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