View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2452_low_28 (Length: 214)
Name: NF2452_low_28
Description: NF2452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2452_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 36571683 - 36571860
Alignment:
| Q |
19 |
atgaatgaggttagtatgaaaattattgtgtggtctggtgtatgggctataacttgtcactcattgcaacaatgaaagaataagaaggttcatgttgaag |
118 |
Q |
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| T |
36571683 |
atgaatgaggttagtatgaaaattattgtgtggtctggtgtatgggctataacttgtcactcattgcaacaatgaaagaataagaaggttcatgttgaag |
36571782 |
T |
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| Q |
119 |
gtttcactcgtcctcatgcaccttggatagaggtttcaaggcgataaatctgcatattgactcgaagttagtgattca |
196 |
Q |
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| T |
36571783 |
gtttcactcgtcctcatgcaccttggatagaggtttcaaggcgataaatctgcatattgactcgaagttagtgattca |
36571860 |
T |
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