View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2454_low_1_N (Length: 722)

Name: NF2454_low_1_N
Description: NF2454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2454_low_1_N
NF2454_low_1_N
[»] chr2 (38 HSPs)
chr2 (492-711)||(33629183-33629403)
chr2 (545-717)||(23343973-23344145)
chr2 (492-599)||(36237727-36237836)
chr2 (438-485)||(1297123-1297170)
chr2 (438-485)||(9275591-9275638)
chr2 (438-485)||(29719451-29719498)
chr2 (438-485)||(1296384-1296431)
chr2 (438-485)||(9276330-9276377)
chr2 (438-485)||(11750262-11750309)
chr2 (438-485)||(22560568-22560615)
chr2 (438-485)||(36237636-36237683)
chr2 (438-480)||(9540336-9540378)
chr2 (438-480)||(12725620-12725662)
chr2 (438-472)||(15902895-15902929)
chr2 (438-480)||(22301875-22301917)
chr2 (438-480)||(24754999-24755041)
chr2 (438-480)||(27177917-27177959)
chr2 (438-480)||(29513152-29513194)
chr2 (241-334)||(636978-637071)
chr2 (438-487)||(29559418-29559467)
chr2 (444-480)||(16692979-16693015)
chr2 (436-480)||(20432373-20432417)
chr2 (438-482)||(26589020-26589064)
chr2 (441-485)||(42182615-42182659)
chr2 (438-485)||(18174670-18174717)
chr2 (439-482)||(26588244-26588287)
chr2 (443-485)||(11007241-11007283)
chr2 (438-480)||(11751074-11751116)
chr2 (438-480)||(18174104-18174146)
chr2 (438-480)||(18820437-18820479)
chr2 (438-480)||(23857029-23857071)
chr2 (438-472)||(26752736-26752770)
chr2 (438-480)||(27178650-27178692)
chr2 (438-480)||(34812861-34812903)
chr2 (438-480)||(40252027-40252069)
chr2 (429-487)||(42459047-42459105)
chr2 (439-480)||(6584232-6584273)
chr2 (436-485)||(23856638-23856687)
[»] chr7 (48 HSPs)
chr7 (492-717)||(43928549-43928775)
chr7 (492-717)||(45162063-45162292)
chr7 (492-717)||(29188444-29188672)
chr7 (492-717)||(25599116-25599333)
chr7 (492-689)||(21156741-21156939)
chr7 (492-680)||(3688478-3688662)
chr7 (438-500)||(3903324-3903387)
chr7 (438-500)||(24719339-24719402)
chr7 (438-500)||(25599026-25599089)
chr7 (438-500)||(30661440-30661503)
chr7 (438-500)||(37949609-37949672)
chr7 (436-480)||(43065122-43065166)
chr7 (438-485)||(7668486-7668533)
chr7 (438-500)||(19067641-19067704)
chr7 (438-485)||(25342501-25342548)
chr7 (438-485)||(25343307-25343354)
chr7 (438-485)||(26636107-26636154)
chr7 (438-485)||(46428191-46428238)
chr7 (438-480)||(13785599-13785641)
chr7 (438-499)||(19068381-19068443)
chr7 (438-480)||(30660597-30660639)
chr7 (438-480)||(37950473-37950515)
chr7 (438-480)||(45099899-45099941)
chr7 (438-485)||(3772527-3772574)
chr7 (438-485)||(24389617-24389664)
chr7 (438-485)||(26636861-26636908)
chr7 (438-485)||(27948450-27948497)
chr7 (283-338)||(41708605-41708660)
chr7 (438-480)||(1417612-1417654)
chr7 (438-480)||(3029204-3029246)
chr7 (438-480)||(31278160-31278202)
chr7 (438-480)||(37395505-37395547)
chr7 (438-480)||(38225981-38226023)
chr7 (438-480)||(47719710-47719752)
chr7 (438-485)||(16664126-16664173)
chr7 (438-485)||(17638486-17638533)
chr7 (438-485)||(18977770-18977817)
chr7 (438-485)||(21496984-21497031)
chr7 (438-485)||(25343240-25343287)
chr7 (438-485)||(40273564-40273611)
chr7 (438-485)||(45161973-45162020)
chr7 (438-480)||(3688388-3688430)
chr7 (438-480)||(14305094-14305136)
chr7 (438-480)||(14686135-14686177)
chr7 (434-480)||(23889812-23889858)
chr7 (434-480)||(23901158-23901204)
chr7 (442-480)||(24453732-24453770)
chr7 (438-472)||(46428831-46428865)
[»] chr6 (19 HSPs)
chr6 (492-706)||(19311095-19311311)
chr6 (438-485)||(10171280-10171327)
chr6 (438-485)||(26529513-26529560)
chr6 (438-485)||(8488473-8488520)
chr6 (438-485)||(10171966-10172013)
chr6 (441-480)||(19322990-19323029)
chr6 (438-485)||(19323767-19323814)
chr6 (438-485)||(26528827-26528874)
chr6 (438-484)||(1366972-1367018)
chr6 (442-480)||(19311832-19311870)
chr6 (438-480)||(33436279-33436321)
chr6 (438-485)||(12344898-12344945)
chr6 (438-485)||(19311005-19311052)
chr6 (438-480)||(8489285-8489327)
chr6 (442-480)||(9441245-9441283)
chr6 (438-480)||(18227736-18227777)
chr6 (438-480)||(33435344-33435386)
chr6 (439-480)||(9441985-9442026)
chr6 (439-480)||(9442066-9442107)
[»] chr4 (51 HSPs)
chr4 (492-717)||(24008463-24008692)
chr4 (632-717)||(52107555-52107640)
chr4 (438-487)||(53772812-53772861)
chr4 (436-480)||(52871301-52871345)
chr4 (438-485)||(47688480-47688527)
chr4 (438-480)||(2444377-2444419)
chr4 (438-487)||(599300-599349)
chr4 (439-480)||(55976172-55976213)
chr4 (442-485)||(16903644-16903687)
chr4 (438-485)||(19080390-19080437)
chr4 (438-485)||(20774181-20774228)
chr4 (438-485)||(26147033-26147080)
chr4 (438-485)||(30573710-30573757)
chr4 (438-485)||(47785800-47785847)
chr4 (438-485)||(53732440-53732487)
chr4 (437-472)||(55001454-55001489)
chr4 (438-480)||(3654521-3654563)
chr4 (438-480)||(8248526-8248568)
chr4 (438-480)||(8266191-8266233)
chr4 (256-338)||(13849366-13849448)
chr4 (438-480)||(19550291-19550333)
chr4 (438-480)||(31329723-31329765)
chr4 (438-480)||(42882687-42882729)
chr4 (491-548)||(45920985-45921043)
chr4 (438-480)||(53773592-53773634)
chr4 (495-548)||(55001343-55001397)
chr4 (497-581)||(5046084-5046169)
chr4 (444-485)||(53733732-53733773)
chr4 (440-480)||(9365822-9365862)
chr4 (429-485)||(24374785-24374841)
chr4 (279-334)||(12107168-12107223)
chr4 (442-477)||(16903677-16903712)
chr4 (438-485)||(56262483-56262530)
chr4 (438-480)||(2446167-2446209)
chr4 (438-480)||(5046488-5046530)
chr4 (438-480)||(7841549-7841591)
chr4 (438-472)||(8247701-8247735)
chr4 (438-472)||(8265366-8265400)
chr4 (438-480)||(24158826-24158868)
chr4 (438-480)||(24551929-24551971)
chr4 (438-480)||(26159627-26159669)
chr4 (438-480)||(32089619-32089661)
chr4 (442-480)||(43146654-43146692)
chr4 (438-480)||(44469497-44469539)
chr4 (438-480)||(47687914-47687956)
chr4 (438-480)||(50184433-50184475)
chr4 (438-480)||(53147876-53147918)
chr4 (438-480)||(55000692-55000734)
chr4 (446-480)||(55976961-55976995)
chr4 (439-480)||(12919591-12919632)
chr4 (438-479)||(40495100-40495141)
[»] chr8 (28 HSPs)
chr8 (495-710)||(42007608-42007822)
chr8 (492-717)||(26395135-26395348)
chr8 (492-641)||(25929236-25929386)
chr8 (492-680)||(17725427-17725611)
chr8 (492-599)||(28930705-28930814)
chr8 (438-485)||(38576302-38576349)
chr8 (434-480)||(26654383-26654429)
chr8 (438-480)||(41974645-41974687)
chr8 (438-487)||(8372918-8372967)
chr8 (438-482)||(8373696-8373740)
chr8 (438-480)||(3165127-3165169)
chr8 (438-480)||(32414529-32414571)
chr8 (229-315)||(42650201-42650286)
chr8 (439-480)||(9197101-9197142)
chr8 (438-479)||(37732831-37732872)
chr8 (436-480)||(28929848-28929892)
chr8 (438-485)||(45920-45967)
chr8 (438-485)||(31602021-31602068)
chr8 (438-480)||(3043970-3044012)
chr8 (438-480)||(9197825-9197867)
chr8 (438-480)||(11686231-11686273)
chr8 (438-472)||(14825648-14825682)
chr8 (438-480)||(17725659-17725701)
chr8 (438-480)||(22320379-22320421)
chr8 (438-480)||(26652298-26652340)
chr8 (438-472)||(27441471-27441505)
chr8 (438-480)||(31641516-31641558)
chr8 (438-480)||(39860115-39860159)
[»] chr3 (39 HSPs)
chr3 (492-609)||(13476296-13476414)
chr3 (492-599)||(45081252-45081361)
chr3 (438-485)||(265099-265146)
chr3 (438-480)||(17603173-17603215)
chr3 (438-480)||(21727535-21727577)
chr3 (491-599)||(46150580-46150689)
chr3 (438-480)||(48648208-48648250)
chr3 (428-480)||(14871148-14871200)
chr3 (436-480)||(40872814-40872858)
chr3 (442-485)||(17605715-17605758)
chr3 (438-485)||(31974656-31974703)
chr3 (438-485)||(46150730-46150777)
chr3 (439-485)||(981673-981719)
chr3 (438-480)||(37987238-37987280)
chr3 (434-480)||(51827500-51827546)
chr3 (442-480)||(55373712-55373750)
chr3 (439-480)||(11203207-11203248)
chr3 (439-480)||(20212986-20213027)
chr3 (438-487)||(31115598-31115647)
chr3 (445-482)||(44699824-44699861)
chr3 (443-480)||(48413329-48413366)
chr3 (439-480)||(52282418-52282459)
chr3 (445-480)||(17603967-17604002)
chr3 (438-485)||(37520562-37520609)
chr3 (442-485)||(41458042-41458085)
chr3 (438-485)||(45081404-45081451)
chr3 (438-485)||(48507033-48507080)
chr3 (434-480)||(10847915-10847961)
chr3 (438-480)||(13477062-13477104)
chr3 (438-480)||(20213537-20213579)
chr3 (438-480)||(37988224-37988266)
chr3 (438-480)||(46149634-46149676)
chr3 (438-480)||(48649179-48649221)
chr3 (438-480)||(48765076-48765118)
chr3 (438-480)||(51469285-51469327)
chr3 (438-480)||(52605489-52605531)
chr3 (438-480)||(54458671-54458713)
chr3 (444-485)||(13477779-13477820)
chr3 (439-480)||(33277510-33277551)
[»] chr1 (43 HSPs)
chr1 (492-609)||(4433183-4433301)
chr1 (492-575)||(4134668-4134752)
chr1 (438-500)||(34309215-34309278)
chr1 (438-500)||(4433833-4433895)
chr1 (438-500)||(4439192-4439254)
chr1 (438-480)||(25469092-25469134)
chr1 (438-499)||(27256698-27256760)
chr1 (438-499)||(34308477-34308539)
chr1 (438-480)||(49680815-49680857)
chr1 (429-485)||(30663353-30663409)
chr1 (436-480)||(45818023-45818067)
chr1 (438-482)||(46391870-46391914)
chr1 (438-485)||(10121553-10121600)
chr1 (438-485)||(13262837-13262884)
chr1 (438-485)||(13263517-13263564)
chr1 (438-485)||(30663977-30664024)
chr1 (438-485)||(30932796-30932843)
chr1 (438-480)||(7559205-7559247)
chr1 (438-480)||(10120787-10120829)
chr1 (438-499)||(11548804-11548866)
chr1 (438-480)||(17171935-17171977)
chr1 (438-472)||(17172676-17172710)
chr1 (438-480)||(19172581-19172623)
chr1 (438-480)||(24991974-24992016)
chr1 (438-480)||(47967866-47967908)
chr1 (436-485)||(8988549-8988598)
chr1 (436-485)||(46812188-46812237)
chr1 (280-344)||(8050486-8050550)
chr1 (283-315)||(16939476-16939508)
chr1 (438-485)||(168894-168941)
chr1 (438-485)||(7406249-7406296)
chr1 (438-485)||(8987794-8987841)
chr1 (438-485)||(25468514-25468561)
chr1 (438-485)||(28181537-28181584)
chr1 (438-480)||(7558453-7558495)
chr1 (438-480)||(11704814-11704856)
chr1 (438-472)||(13142681-13142715)
chr1 (438-480)||(19171782-19171824)
chr1 (438-480)||(28182078-28182120)
chr1 (438-480)||(36390373-36390415)
chr1 (438-480)||(37577651-37577693)
chr1 (438-480)||(37853141-37853183)
chr1 (225-318)||(44836123-44836216)
[»] scaffold0096 (1 HSPs)
scaffold0096 (439-487)||(39901-39949)
[»] chr5 (38 HSPs)
chr5 (438-482)||(234705-234749)
chr5 (438-482)||(237824-237868)
chr5 (438-482)||(19359708-19359752)
chr5 (438-485)||(6476791-6476838)
chr5 (438-485)||(29046033-29046080)
chr5 (438-480)||(7632099-7632141)
chr5 (491-548)||(9407968-9408026)
chr5 (438-480)||(19128774-19128816)
chr5 (491-548)||(19128861-19128919)
chr5 (438-482)||(19360479-19360523)
chr5 (492-551)||(22212876-22212936)
chr5 (438-485)||(235596-235643)
chr5 (438-477)||(1283533-1283572)
chr5 (438-477)||(10554526-10554565)
chr5 (442-485)||(10554555-10554598)
chr5 (438-485)||(27364487-27364534)
chr5 (438-485)||(28705879-28705926)
chr5 (438-480)||(1281840-1281882)
chr5 (442-480)||(1283505-1283543)
chr5 (438-480)||(1554088-1554130)
chr5 (438-480)||(14478925-14478967)
chr5 (438-480)||(25858214-25858256)
chr5 (439-485)||(28705170-28705216)
chr5 (438-480)||(29087929-29087971)
chr5 (438-485)||(236929-236976)
chr5 (438-485)||(4084884-4084931)
chr5 (438-485)||(17071228-17071275)
chr5 (437-480)||(22798904-22798947)
chr5 (438-485)||(34600265-34600312)
chr5 (433-480)||(34709042-34709089)
chr5 (438-485)||(38056798-38056845)
chr5 (438-480)||(17071799-17071841)
chr5 (438-480)||(20854910-20854952)
chr5 (438-480)||(36038699-36038741)
chr5 (438-480)||(38057600-38057642)
chr5 (438-480)||(43510236-43510278)
chr5 (439-480)||(22799765-22799806)
chr5 (447-480)||(27363779-27363812)
[»] scaffold0176 (1 HSPs)
scaffold0176 (438-480)||(26596-26638)
[»] scaffold0085 (2 HSPs)
scaffold0085 (438-480)||(22076-22118)
scaffold0085 (444-485)||(15859-15900)
[»] scaffold1213 (1 HSPs)
scaffold1213 (434-480)||(1896-1942)
[»] scaffold0504 (1 HSPs)
scaffold0504 (438-480)||(5385-5427)
[»] scaffold2007 (1 HSPs)
scaffold2007 (438-485)||(755-802)
[»] scaffold0093 (1 HSPs)
scaffold0093 (438-485)||(23729-23776)
[»] scaffold1207 (1 HSPs)
scaffold1207 (438-480)||(1591-1633)
[»] scaffold0418 (1 HSPs)
scaffold0418 (438-479)||(6891-6932)
[»] scaffold0012 (1 HSPs)
scaffold0012 (443-472)||(181019-181048)


Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 492 - 711
Target Start/End: Complemental strand, 33629403 - 33629183
Alignment:
Q  492 ttttatttattgtgtatcctttt-ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33629403 ttttatttattgtgtatccttttattcaatcacacactattattatttttaatgattacaaaacctaaattggaaacataatcctatcataattctcctt 33629304  T
Q  591 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaat 690  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33629303 attctcttgtctgcaaaattgaaataccccatagttgaataattaaaatacttccaagatattattgtttagaatgaattggaaatattagttgttaaat 33629204  T
Q  691 gaaattccctctatgatctct 711  Q
    |||||||||||||||||||||    
T  33629203 gaaattccctctatgatctct 33629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 545 - 717
Target Start/End: Original strand, 23343973 - 23344145
Alignment:
Q  545 attacaacacctaaattggaaacataatcctatcataattctccttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctc 644  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||    
T  23343973 attacaaaacctaaattggaaacataatcctatcataattctctttattctcttgtctgcaaaattgaaatattttatagttgaataattaaaatacttc 23344072  T
Q  645 taagatattattgtttagaatgaattggaaatattagttgttaaatgaaattccctctatgatctctgctcct 717  Q
     |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||    
T  23344073 aaagatattattgtttaaaatgaattggaaatattagttgttaaatgcaatttcctctatgatctcttctcct 23344145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 492 - 599
Target Start/End: Original strand, 36237727 - 36237836
Alignment:
Q  492 ttttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatga-ttacaacacctaaattggaaacataatcctatcataattctcct 589  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| |||||| ||| ||||||||||||| ||| |||||| || || ||    
T  36237727 ttttatttattgtgtacccttcttttcaatcacacactattattgttttcaatgatttacaaaaccgaaattggaaacatgatcatatcatgatcctact 36237826  T
Q  590 tattctcttg 599  Q
     |||||||||    
T  36237827 cattctcttg 36237836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 1297170 - 1297123
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1297170 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 1297123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 9275591 - 9275638
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  9275591 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 9275638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 29719451 - 29719498
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  29719451 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 29719498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 1296384 - 1296431
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  1296384 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 1296431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 9276377 - 9276330
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  9276377 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 9276330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 11750262 - 11750309
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  11750262 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 11750309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 22560615 - 22560568
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  22560615 gatccgttgacatcaggtgtcaacggattcgttgacaccaaatctcaa 22560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 36237636 - 36237683
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  36237636 gatccgttgacaccaggtgtcaacggattcattgacaccaaatttcaa 36237683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 9540336 - 9540378
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  9540336 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 9540378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 12725662 - 12725620
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  12725662 gatccgttgacaccaggtgtcaacggatttgttgacaccaaat 12725620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 15902929 - 15902895
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    |||||||||||||||||||||||||||||||||||    
T  15902929 gatccgttgacaccaggtgtcaacggattcgttga 15902895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 22301917 - 22301875
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  22301917 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 22301875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 24755041 - 24754999
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  24755041 gatccgttgacaccaggtgtcaattgattcgttgaaaccaaat 24754999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 27177917 - 27177959
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  27177917 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 27177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 29513194 - 29513152
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  29513194 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 29513152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 637071 - 636978
Alignment:
Q  241 tcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttga 334  Q
    ||||||||||  || |||||||||||||||   | ||||||||||||||||||||||| || |  |||||||||| ||||| |||  |||||||    
T  637071 tcatcataaactcacacacacaaagtggaggaacagatgtttgaaccccaatcataacgtccggtctaacaatttcgacatttttaccggttga 636978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 29559467 - 29559418
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    |||| |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  29559467 gatctgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaatc 29559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 16693015 - 16692979
Alignment:
Q  444 ttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16693015 ttgacaccaggtgtcaacggattcgttgacaccaaat 16692979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 436 - 480
Target Start/End: Complemental strand, 20432417 - 20432373
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||| ||||||||||| |||| |||||||    
T  20432417 aagatccgttgacaccaggtatcaacggattcattgacaccaaat 20432373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 482
Target Start/End: Complemental strand, 26589064 - 26589020
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||    
T  26589064 gatccgttgacaccaagtgtcaacggattcgttgactccaaatat 26589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 42182659 - 42182615
Alignment:
Q  441 ccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||    
T  42182659 ccgttgacaccaggtgtcaagggattcgttgacaccaaatctcaa 42182615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 18174717 - 18174670
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  18174717 gatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaa 18174670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 482
Target Start/End: Original strand, 26588244 - 26588287
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||    
T  26588244 atccgttgacatcaggtgttaacggattcgttgacaccaaatat 26588287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 11007241 - 11007283
Alignment:
Q  443 gttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  11007241 gttgacaccaggtgtcaacggattcgttgacactaaatctcaa 11007283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 11751116 - 11751074
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  11751116 gatccgttgacaccaggtgtcaacgaattcgttaacaccaaat 11751074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 18174104 - 18174146
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  18174104 gatccgttgacaccaggtgttaacgaattcgttgacaccaaat 18174146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 18820437 - 18820479
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| |||||| |||||||||||||||||||||| |||||||    
T  18820437 gatccattgacatcaggtgtcaacggattcgttgacaccaaat 18820479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 23857071 - 23857029
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||| |||||||||||||| ||||| |||||||    
T  23857071 gatccgttgacacctggtgtcaacggattggttgacaccaaat 23857029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 26752770 - 26752736
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    ||||||||||||||||||||||||| |||||||||    
T  26752770 gatccgttgacaccaggtgtcaacgaattcgttga 26752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 27178692 - 27178650
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||  |||| |||||||    
T  27178692 gatccgttgacaccaggtgtcaacggattgtttgacaccaaat 27178650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 34812903 - 34812861
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||| | |||||||    
T  34812903 gatccgttgacaccagttgtcaacggattcgttaacaccaaat 34812861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 40252027 - 40252069
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| || |||||||||||||||||||||||||| |||||||    
T  40252027 gatccattaacaccaggtgtcaacggattcgttgacaccaaat 40252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 429 - 487
Target Start/End: Original strand, 42459047 - 42459105
Alignment:
Q  429 aagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    |||| ||| ||||| |||||||||||||||||| |||||||||| | ||||| ||||||    
T  42459047 aagagtcaggatccattgacaccaggtgtcaacagattcgttgacatcaaatctcaatc 42459105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 6584273 - 6584232
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  6584273 atccattgacaccaagtgtcaacggattcgttgacaccaaat 6584232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 23856638 - 23856687
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||| ||||||||||||||  |||| ||||||| ||||    
T  23856638 aagatccgttgacacctggtgtcaacggattgattgacaccaaatctcaa 23856687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 492 - 717
Target Start/End: Original strand, 43928549 - 43928775
Alignment:
Q  492 ttttatttattgtgtatcctttt-ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  43928549 ttttatttattgtgtatcctttttttcaatcacacactattattgtttttaatgattacaaaacctcaattggaaacataatcctatcataattctcctt 43928648  T
Q  591 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaat 690  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  43928649 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacttcaaagatattattgtttagaatgaattggaaatattagttgttaaat 43928748  T
Q  691 gaaattccctctatgatctctgctcct 717  Q
    | ||||| ||||||||||||| |||||    
T  43928749 gcaattcactctatgatctcttctcct 43928775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 492 - 717
Target Start/End: Original strand, 45162063 - 45162292
Alignment:
Q  492 ttttatttattgtgtatcctttt----ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctc 587  Q
    |||||||||||||||||||||||    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45162063 ttttatttattgtgtatccttttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcctatcataattctc 45162162  T
Q  588 cttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgtta 687  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  45162163 cttattctcttgtctgcaaaattgaaatattctatagttgaataattaaaatacttcaaagatattattgtttagaatgaattggaaatattagttgtta 45162262  T
Q  688 aatgaaattccctctatgatctctgctcct 717  Q
    |||| ||||||||||||||||||| |||||    
T  45162263 aatgcaattccctctatgatctcttctcct 45162292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 492 - 717
Target Start/End: Complemental strand, 29188672 - 29188444
Alignment:
Q  492 ttttatttattgtgtatcctttttt---caatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcc 588  Q
    |||||||||||||||||| ||||||   |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  29188672 ttttatttattgtgtatcttttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcatatcataattctcc 29188573  T
Q  589 ttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaa 688  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  29188572 ttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacttcaaagatattattgtttaaaatgaattggaaatattagttgttaa 29188473  T
Q  689 atgaaattccctctatgatctctgctcct 717  Q
    ||| |||| |||||||||||||| |||||    
T  29188472 atgcaatttcctctatgatctcttctcct 29188444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 492 - 717
Target Start/End: Original strand, 25599116 - 25599333
Alignment:
Q  492 ttttatttattgtgtatcctttt-ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25599116 ttttatttattgtgtatcctttttttcaatcacacactattattatttttaatgattacaaaacctaaattggaaacataatcctatcataattctcctt 25599215  T
Q  591 attctcttgtctgcaaaa-ttgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaa 689  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||          ||| ||||||||||||||||||||||||||||    
T  25599216 attctcttgtctgcaaaatttgaaatactccatagttgaataattaaaatacttccaa----------ttttgaatgaattggaaatattagttgttaaa 25599305  T
Q  690 tgaaattccctctatgatctctgctcct 717  Q
    || |||||| |||||||| ||| |||||    
T  25599306 tgcaattccttctatgatatcttctcct 25599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 492 - 689
Target Start/End: Complemental strand, 21156939 - 21156741
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    |||||||||  ||||||||||| |||||||||||||| |||||| |||| ||||||||||| ||| |||||| |||||| |||  ||||| |  ||||||    
T  21156939 ttttatttacggtgtatcctttctttcaatcacacaccattattgttttcaatgattacaaaacccaaattgaaaacatgatcggatcatgaccctcctt 21156840  T
Q  591 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaa 689  Q
    ||||| |||| | ||||||| |||| |||||||  |||||||||||||||| || |||||||||||| ||| ||||||||| ||| |||||||| ||||    
T  21156839 attctattgttttcaaaattaaaatgctccataactgaataattaaaatacttccaagatattattgcttataatgaattgaaaacattagttggtaaa 21156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 492 - 680
Target Start/End: Original strand, 3688478 - 3688662
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||  ||| |||||| || || |||    
T  3688478 ttttatttattgtgtatcctttctttcaatcacacactattattgtttttaatgattacaaaacccaaactggaaacaagatcgtatcatgatcct-ctt 3688576  T
Q  591 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatatta 680  Q
     ||||||||||  |||| || ||||||||||||  | ||||| ||| |||| || |||||||||| ||||||||| ||||| ||||||||    
T  3688577 cttctcttgtc--caaagttaaaatactccataactaaataa-taagatacttc-aagatattatcgtttagaattaattgaaaatatta 3688662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 3903387 - 3903324
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||||    
T  3903387 gatccgttgacaccaggtgtcaacggatccgttgacaccaaatatcaatcattcattttattta 3903324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 24719339 - 24719402
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||    
T  24719339 gatccgttgacaccagatgtcaacggattcgttgacaccaaatatcaatcattcattttattta 24719402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 25599026 - 25599089
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  25599026 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaatcgttgatcttattta 25599089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 30661503 - 30661440
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  30661503 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 30661440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 37949609 - 37949672
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  37949609 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 37949672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 436 - 480
Target Start/End: Complemental strand, 43065166 - 43065122
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  43065166 aagatccgttgacaccaggtgtcaacggattcgttgacaccaaat 43065122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 7668486 - 7668533
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  7668486 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 7668533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 19067641 - 19067704
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  19067641 gatccgttgacaccacgtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 19067704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 25342501 - 25342548
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  25342501 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 25342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 25343307 - 25343354
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  25343307 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 25343354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 26636107 - 26636154
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  26636107 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 26636154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 46428191 - 46428238
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  46428191 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 46428238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 13785641 - 13785599
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  13785641 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 13785599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 19068443 - 19068381
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 499  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  19068443 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgttgattttattt 19068381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 30660597 - 30660639
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  30660597 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 30660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 37950515 - 37950473
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  37950515 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 37950473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 45099941 - 45099899
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  45099941 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 45099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 3772574 - 3772527
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  3772574 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatctcaa 3772527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 24389664 - 24389617
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  24389664 gatccgttgacaccaggtgtcaacggattcattgacaccaaatctcaa 24389617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 26636908 - 26636861
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  26636908 gatccgttgacacaaggtgtcaacggattcgttgacaccaaatctcaa 26636861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 27948450 - 27948497
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  27948450 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 27948497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 41708605 - 41708660
Alignment:
Q  283 gaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagcta 338  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||| || |||||||||    
T  41708605 gaaccccgatcataacatccgacctaacaattttgacatttttatcagttgagcta 41708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 1417612 - 1417654
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  1417612 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 1417654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 3029246 - 3029204
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  3029246 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 3029204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 31278202 - 31278160
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  31278202 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 31278160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 37395547 - 37395505
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  37395547 gatccgttgacaccaggtgtcaacggattcgttaacaccaaat 37395505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 38226023 - 38225981
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  38226023 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 38225981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 47719752 - 47719710
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  47719752 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 47719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 16664173 - 16664126
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||||||| |||||| || |||| ||||    
T  16664173 gatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaa 16664126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 17638533 - 17638486
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||||||| |||||| || |||| ||||    
T  17638533 gatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaa 17638486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 18977817 - 18977770
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  18977817 gatccattgacaccaggtgtcaacggattcgttaacaccaaatctcaa 18977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 21497031 - 21496984
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  21497031 gatccgttgacaacaggtgtcaacgaattcgttgacaccaaatctcaa 21496984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 25343287 - 25343240
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  25343287 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 25343240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 40273564 - 40273611
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  40273564 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 40273611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 45161973 - 45162020
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| ||||    
T  45161973 gatccattgacaccaggtgttaacggattcgttgacaccaaatctcaa 45162020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 3688388 - 3688430
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| | |||||||||||||||| |||||||    
T  3688388 gatccgttgacaccagatatcaacggattcgttgacaccaaat 3688430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 14305094 - 14305136
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||| |||||||||||||||| |||| |||||||    
T  14305094 gatccgttgacactaggtgtcaacggattcattgacaccaaat 14305136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 14686135 - 14686177
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||    
T  14686135 gatccgttgacaccaagtgtcaacggatttgttgacaccaaat 14686177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 23889858 - 23889812
Alignment:
Q  434 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  23889858 tcaagatccgttggcacctggtgtcaacgaattcgttgacaccaaat 23889812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 23901158 - 23901204
Alignment:
Q  434 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||| || ||| |||||||||| |||||||    
T  23901158 tcaagatccgttgacaccaggggttaacagattcgttgacaccaaat 23901204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 24453770 - 24453732
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  24453770 cgttgacaccaggtgtcaacggatttgttgacaccaaat 24453732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 46428865 - 46428831
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    ||||||||||||||||||||||||| |||||||||    
T  46428865 gatccgttgacaccaggtgtcaacgaattcgttga 46428831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 1e-95; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 492 - 706
Target Start/End: Original strand, 19311095 - 19311311
Alignment:
Q  492 ttttatttattgtgtatcctttt--ttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcct 589  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  19311095 ttttatttattgtgtatccttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcctatcataattctcat 19311194  T
Q  590 tattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaa 689  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  19311195 tattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacttcaaagatattattgtttagaaagaattggaaatattagttgttaaa 19311294  T
Q  690 tgaaattccctctatga 706  Q
    || ||||||||||||||    
T  19311295 tgcaattccctctatga 19311311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 10171280 - 10171327
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  10171280 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 10171327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 26529560 - 26529513
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  26529560 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 26529513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 8488473 - 8488520
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  8488473 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 8488520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 10172013 - 10171966
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  10172013 gatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaa 10171966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 441 - 480
Target Start/End: Original strand, 19322990 - 19323029
Alignment:
Q  441 ccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  19322990 ccgttgacaccaggtgtcaacggattcgttgacaccaaat 19323029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 19323814 - 19323767
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  19323814 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 19323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 26528827 - 26528874
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  26528827 gatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaa 26528874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 484
Target Start/End: Original strand, 1366972 - 1367018
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatca 484  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||    
T  1366972 gatccgttgacttcaggtgtcaacggattcgttgacaccaaatatca 1367018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 19311870 - 19311832
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  19311870 cgttgacaccaggtgtcaacggattcgttgacaccaaat 19311832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 33436321 - 33436279
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  33436321 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 12344898 - 12344945
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| ||||    
T  12344898 gatccattgacaccaggtgtcaacagattcgttgataccaaatctcaa 12344945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 19311005 - 19311052
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||| |||||||| ||||| ||||||| ||||    
T  19311005 gatccgttgacaccaggtgttaacggatttgttgacaccaaatctcaa 19311052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 8489327 - 8489285
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  8489327 gatccgttgacaccaggtgtcaacgaattcgttaacaccaaat 8489285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 480
Target Start/End: Original strand, 9441245 - 9441283
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  9441245 cgttgacaccaggtgtcaacggatccgttgacaccaaat 9441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 18227736 - 18227777
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  18227736 gatccgttgacaccag-tgtcaacggattcgttgacaccaaat 18227777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 33435344 - 33435386
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||| ||||| |||||||||||||| |||||||    
T  33435344 gatccgttgacacctggtgttaacggattcgttgacaccaaat 33435386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 9442026 - 9441985
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||| |||||||||||||||||||| | |||||||    
T  9442026 atccgttgacatcaggtgtcaacggattcgttcacaccaaat 9441985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 9442107 - 9442066
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||| |||||||||||||||||||| | |||||||    
T  9442107 atccgttgacatcaggtgtcaacggattcgttcacaccaaat 9442066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 5e-95; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 492 - 717
Target Start/End: Original strand, 24008463 - 24008692
Alignment:
Q  492 ttttatttattgtgtatc----cttttttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctc 587  Q
    ||||||||||||||||||     |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24008463 ttttatttattgtgtatctttttttttttcaatcacacactattattgtttttaatgattacaaaacctaaattggaaacataatcctatcataattctc 24008562  T
Q  588 cttattctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgtta 687  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  24008563 cttattctcttgtctgcaaaattgaaatactgcatagttgaataattaaaatacttcaaagatattattgtttaaaatgaattggaaatattagttgtta 24008662  T
Q  688 aatgaaattccctctatgatctctgctcct 717  Q
    |||| ||||||||||||||||||| |||||    
T  24008663 aatgcaattccctctatgatctcttctcct 24008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 632 - 717
Target Start/End: Complemental strand, 52107640 - 52107555
Alignment:
Q  632 attaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaatgaaattccctctatgatctctgctcct 717  Q
    |||||||||| || || |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  52107640 attaaaatacttccaaaatattattgtttagaacgaattggaaatattagttgttaaatgcaattccctatatgatctcttctcct 52107555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 53772812 - 53772861
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  53772812 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaatc 53772861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 52871301 - 52871345
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  52871301 aagatccgttgacaccaggtgtcaacggattcgttgacaccaaat 52871345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 47688527 - 47688480
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  47688527 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 47688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 2444377 - 2444419
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  2444377 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 2444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 599349 - 599300
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  599349 gatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaatc 599300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 55976172 - 55976213
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  55976172 atccgttgacaccaggtgtcaacggattcgttgacaccaaat 55976213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 16903687 - 16903644
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  16903687 cgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 16903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 19080390 - 19080437
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  19080390 gatctgttgacaccaggtgtcaacggattcgttgacaccaaatttcaa 19080437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 20774228 - 20774181
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  20774228 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 20774181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 26147080 - 26147033
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  26147080 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 26147033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 30573757 - 30573710
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  30573757 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 30573710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 47785847 - 47785800
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  47785847 gatctgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 47785800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 53732440 - 53732487
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  53732440 gatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaa 53732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 437 - 472
Target Start/End: Complemental strand, 55001489 - 55001454
Alignment:
Q  437 agatccgttgacaccaggtgtcaacggattcgttga 472  Q
    ||||||||||||||||||||||||||||||||||||    
T  55001489 agatccgttgacaccaggtgtcaacggattcgttga 55001454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 3654563 - 3654521
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  3654563 gatccgttgacgccaggtgtcaacggattcgttgacaccaaat 3654521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 8248568 - 8248526
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  8248568 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 8248526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 8266233 - 8266191
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  8266233 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 8266191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 13849448 - 13849366
Alignment:
Q  256 acacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagcta 338  Q
    ||||||||||||||| || ||  ||| ||||||| ||||  || |||||||||||||||| ||||| |||||| |||||||||    
T  13849448 acacacaaagtggaggtgtcggggttcgaaccccgatcaagacgtctgacctaacaatttcgacatttttgtcagttgagcta 13849366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 19550291 - 19550333
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  19550291 gatcccttgacaccaggtgtcaacggattcgttgacaccaaat 19550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 31329765 - 31329723
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  31329765 gatccgttgacaccaggtgtcaacggattcgttaacaccaaat 31329723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 42882729 - 42882687
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  42882729 gatccgttgacaccagatgtcaacggattcgttgacaccaaat 42882687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 491 - 548
Target Start/End: Complemental strand, 45921043 - 45920985
Alignment:
Q  491 attttatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 548  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| | || ||||||||    
T  45921043 attttatttattttgtatcctctttttcaatcacacactattattgtattcaatgatta 45920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 53773634 - 53773592
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  53773634 gatccgttgacatcaggtgtcaacggattcgttgacaccaaat 53773592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 548
Target Start/End: Complemental strand, 55001397 - 55001343
Alignment:
Q  495 tatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 548  Q
    ||||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  55001397 tatttattgtgtatcctctttttcaatcacacactattattgtattcaatgatta 55001343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 581
Target Start/End: Original strand, 5046084 - 5046169
Alignment:
Q  497 tttattgtgtatccttttttca-atcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcata 581  Q
    ||||||||||||||||| ||   |||||||||||||||| | ||||||||||| || ||  ||||||||||||| ||| |||||||    
T  5046084 tttattgtgtatcctttcttgtgatcacacactattattgtatttaatgattataaaactcaaattggaaacatgatcttatcata 5046169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 53733773 - 53733732
Alignment:
Q  444 ttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||| ||||||| ||||    
T  53733773 ttgacaccaggtgtcaacggattcgttgacaccaaatttcaa 53733732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 480
Target Start/End: Complemental strand, 9365862 - 9365822
Alignment:
Q  440 tccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  9365862 tccgttgacaccaggtgtcaacggattcattgacaccaaat 9365822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 24374785 - 24374841
Alignment:
Q  429 aagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| ||| |||||||||||||||| |||||||| ||||||||| ||||||| ||||    
T  24374785 aagagtcaggatccgttgacaccagctgtcaacgaattcgttgacaccaaatctcaa 24374841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 12107168 - 12107223
Alignment:
Q  279 gtttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttga 334  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| || |||||    
T  12107168 gtttgaactccaatcataacatccgacctaacaatttcgacatttttatcagttga 12107223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 477
Target Start/End: Complemental strand, 16903712 - 16903677
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaacca 477  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16903712 cgttgacaccaggtgtcaacggattcgttgacacca 16903677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 56262483 - 56262530
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  56262483 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 56262530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 2446209 - 2446167
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||| |||||||| | |||||||    
T  2446209 gatccgttgacaccaggtgtcaacagattcgttaacaccaaat 2446167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 5046530 - 5046488
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  5046530 gatccgttgacaccaggtatcaacagattcgttgacaccaaat 5046488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 7841549 - 7841591
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| ||||||| |||||||||||||| |||||||    
T  7841549 gatccgttgacatcaggtgttaacggattcgttgacaccaaat 7841591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 8247701 - 8247735
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    |||||||||||||| ||||||||||||||||||||    
T  8247701 gatccgttgacacctggtgtcaacggattcgttga 8247735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 8265366 - 8265400
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    |||||||||||||| ||||||||||||||||||||    
T  8265366 gatccgttgacacctggtgtcaacggattcgttga 8265400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 24158868 - 24158826
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  24158868 gatccattgacaccaggtgtcaacagattcgttgacaccaaat 24158826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 24551971 - 24551929
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||    
T  24551971 gatccattgacaccaggtgtcaacggatttgttgacaccaaat 24551929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 26159669 - 26159627
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  26159669 gatccgttgacatcaagtgtcaacggattcgttgacaccaaat 26159627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 32089661 - 32089619
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| |||||||| ||||||||| |||||||    
T  32089661 gatccgttgacaccagatgtcaacgaattcgttgataccaaat 32089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 43146692 - 43146654
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  43146692 cgttgacaccaggtgtcaacggattccttgacaccaaat 43146654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 44469497 - 44469539
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||| |||||||||||||||||| ||||||||| |||||||    
T  44469497 gatccgatgacaccaggtgtcaacgaattcgttgacaccaaat 44469539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 47687914 - 47687956
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  47687914 gatccgttgacaccaggtgttaacgaattcgttgacaccaaat 47687956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 50184433 - 50184475
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||| | |||||||||||||||||||||| |||||||    
T  50184433 gatccgttgatatcaggtgtcaacggattcgttgacaccaaat 50184475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 53147876 - 53147918
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  53147876 gatccattgacaccagatgtcaacggattcgttgacaccaaat 53147918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 55000692 - 55000734
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  55000692 gatccattgacaccagatgtcaacggattcgttgacaccaaat 55000734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 55976995 - 55976961
Alignment:
Q  446 gacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||| |||||||    
T  55976995 gacaccaggtgtcaacggattcgttgacaccaaat 55976961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 12919591 - 12919632
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| |||||| | |||||||    
T  12919591 atccgttgacaccaggtgtcaacgggttcgttaacaccaaat 12919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 479
Target Start/End: Original strand, 40495100 - 40495141
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaa 479  Q
    ||||||||||||||||||||||||  ||||||||| ||||||    
T  40495100 gatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 40495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 3e-56; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 495 - 710
Target Start/End: Original strand, 42007608 - 42007822
Alignment:
Q  495 tatttattgtgtatccttttttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctccttattc 594  Q
    ||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||| || |||||||||||| || || ||||||||||||| ||||||    
T  42007608 tatttattgtgtatcattttttcaatcacacattattattgattttaatgattacaaaacttaaattggaaactta-tcgtatcataattctctttattc 42007706  T
Q  595 tcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaatgaaa 694  Q
    ||| || ||||||| | ||||||||||||  || ||||||||||||| || |||||||||||||||| |||||||   |||||||||||| |||||| ||    
T  42007707 tctggtttgcaaaaataaaatactccataactggataattaaaatacttccaagatattattgtttaaaatgaatgaaaaatattagttggtaaatgcaa 42007806  T
Q  695 ttccctctatgatctc 710  Q
    ||||||||||||||||    
T  42007807 ttccctctatgatctc 42007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 492 - 717
Target Start/End: Complemental strand, 26395348 - 26395135
Alignment:
Q  492 ttttatttattgtgtatccttttttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctta 591  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||   ||| |||||| |||||| |||||||||||||||||        
T  26395348 ttttatttattgtgtatcttttttttaatcacacactattattgtttttaatgattaccgtacccaaattgaaaacatgatcctatcataattctc---- 26395253  T
Q  592 ttctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatattagttgttaaatg 691  Q
         |||||||||||||||||||||||||||  | |||||||||||||| |  ||||||||||| ||||||||||||||||||||| |    |||||||    
T  26395252 -----ttgtctgcaaaattgaaatactccataactaaataattaaaatacttgcaagatattattttttagaatgaattggaaatatca---attaaatg 26395161  T
Q  692 aaattccctctatgatctctgctcct 717  Q
     ||||| ||||||||||||| |||||    
T  26395160 caattctctctatgatctcttctcct 26395135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 492 - 641
Target Start/End: Complemental strand, 25929386 - 25929236
Alignment:
Q  492 ttttatttattgtgtatcctttttt-caatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||| |||||| |||||| ||| |||||||||||| |||    
T  25929386 ttttatttattgtgtatcttttttttcaatcacacactattattgtttttaatgattacaaaacccaaattgaaaacatgatcatatcataattcttctt 25929287  T
Q  591 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatac 641  Q
    ||||| |||||||||||||| ||||||||||||  ||||||||||||||||    
T  25929286 attcttttgtctgcaaaattaaaatactccataactgaataattaaaatac 25929236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 492 - 680
Target Start/End: Complemental strand, 17725611 - 17725427
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||  ||| |||||| || || |||    
T  17725611 ttttatttattgtgtatcctttctttcaatcacacactattattgtttttaatgattacaaaacccaaactggaaacaagatcgtatcatgatcct-ctt 17725513  T
Q  591 attctcttgtctgcaaaattgaaatactccatagttgaataattaaaatacctctaagatattattgtttagaatgaattggaaatatta 680  Q
     ||||||||||  |||| || ||||||||||||  | ||||| ||| |||| || |||||||||| ||||||||| ||||| ||||||||    
T  17725512 cttctcttgtc--caaagttaaaatactccataaataaataa-taagatacttc-aagatattatcgtttagaattaattgaaaatatta 17725427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 492 - 599
Target Start/End: Complemental strand, 28930814 - 28930705
Alignment:
Q  492 ttttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatg-attacaacacctaaattggaaacataatcctatcataattctcct 589  Q
    |||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||| ||  ||||||||||||| ||| |||||| || || ||    
T  28930814 ttttatttattgtgtacccttcttttcaatcacacactattattgtttttaatgaattacaaaactgaaattggaaacatgatcatatcatgatcctact 28930715  T
Q  590 tattctcttg 599  Q
     |||||||||    
T  28930714 cattctcttg 28930705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 38576349 - 38576302
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38576349 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 38576302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 26654429 - 26654383
Alignment:
Q  434 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26654429 tcaagatccgttgacaccaggtgtcaatggattcgttgacaccaaat 26654383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 41974645 - 41974687
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  41974645 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 41974687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 8372918 - 8372967
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  8372918 gatccgttgacacctggtgtcaacggattcgttgacaccaaatattaatc 8372967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 482
Target Start/End: Complemental strand, 8373740 - 8373696
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||    
T  8373740 gatccgttgacaccaagtgtcaacggattcgttgacaccaaatat 8373696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 3165169 - 3165127
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  3165169 gatccgttgacatcaggtgtcaacggattcgttgacaccaaat 3165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 32414571 - 32414529
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  32414571 gatctgttgacaccaggtgtcaacggattcgttgacaccaaat 32414529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 315
Target Start/End: Complemental strand, 42650286 - 42650201
Alignment:
Q  229 gaaatgataaagtcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattt 315  Q
    |||||||||||||||| |||||  |||||||| || |||||| | |||| ||| |||||||||||||  |||| |||||||||||||    
T  42650286 gaaatgataaagtcattataaactcatacacataa-gtggaggtaccgaggttcgaaccccaatcatggcatccgacctaacaattt 42650201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 9197101 - 9197142
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  9197101 atccgttgacaccaggtgtcaacgaattcgttgacaccaaat 9197142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 479
Target Start/End: Original strand, 37732831 - 37732872
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaa 479  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  37732831 gatccgttgacacctggtgtcaacggattcgttgacaccaaa 37732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 28929848 - 28929892
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||| |||||||||| |||||||||||||||||| |||||||    
T  28929848 aagatccattgacaccagatgtcaacggattcgttgacaccaaat 28929892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 45967 - 45920
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||| ||||||||||||| | ||||||||| ||||||||||||    
T  45967 gatccgttggcaccaggtgtcaatgaattcgttgacaccaaatatcaa 45920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 31602021 - 31602068
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| |||||||||||||||||||| ||||||||| ||||||| ||||    
T  31602021 gatcggttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 31602068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 3044012 - 3043970
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||    
T  3044012 gatccgtcgacaccaggtgtcaacgaattcgttgacaccaaat 3043970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 9197867 - 9197825
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||    
T  9197867 gatccgttgacaccaagtgtcaacgaattcgttgacaccaaat 9197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 11686231 - 11686273
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||    
T  11686231 gatccattggcaccaggtgtcaacggattcgttgacaccaaat 11686273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 14825648 - 14825682
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    ||||||||||||| |||||||||||||||||||||    
T  14825648 gatccgttgacactaggtgtcaacggattcgttga 14825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 17725701 - 17725659
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| |||||||||||| ||||||||| |||||||    
T  17725701 gatccgttgacagcaggtgtcaacgaattcgttgacaccaaat 17725659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 22320379 - 22320421
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||  ||||||||||||||||||||||| |||||||    
T  22320379 gatccgttgatgccaggtgtcaacggattcgttgacaccaaat 22320421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 26652298 - 26652340
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  26652298 gatccgttgacaccaggtgtcaacgaattcgttaacaccaaat 26652340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 27441471 - 27441505
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    ||||||||||||||||||||||||| |||||||||    
T  27441471 gatccgttgacaccaggtgtcaacgaattcgttga 27441505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 31641516 - 31641558
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  31641516 gatccattgacaccaggtgtcaatggattcgttgacaccaaat 31641558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 39860115 - 39860159
Alignment:
Q  438 gatccgttgacaccaggtgtcaac--ggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||    
T  39860115 gatccgttgacaccaggtgtcaacaaggattcgttgacaccaaat 39860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 5e-27; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 492 - 609
Target Start/End: Original strand, 13476296 - 13476414
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||| ||  |||||||||| || ||| |||| | |||||||||    
T  13476296 ttttatttattgtgtatcctttctttcaaccacacactattattgttttaaatgattacaaaactcaaattggaaagatgatcgtatcttgattctcctt 13476395  T
Q  591 attctcttgtctgcaaaat 609  Q
    ||||| |||||||||||||    
T  13476396 attcttttgtctgcaaaat 13476414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 599
Target Start/End: Complemental strand, 45081361 - 45081252
Alignment:
Q  492 ttttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatga-ttacaacacctaaattggaaacataatcctatcataattctcct 589  Q
    |||| ||||||||||| |||| |||||||||||||| ||||||| |||| ||||| |||||| ||| ||||||||||||| ||| |||||| || || ||    
T  45081361 ttttttttattgtgtacccttcttttcaatcacacattattattgttttcaatgatttacaaaaccgaaattggaaacatgatcatatcatgatcctact 45081262  T
Q  590 tattctcttg 599  Q
     |||||||||    
T  45081261 cattctcttg 45081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 265146 - 265099
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  265146 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 265099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 17603173 - 17603215
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  17603173 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 17603215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 21727577 - 21727535
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  21727577 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 21727535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 46150689 - 46150580
Alignment:
Q  491 attttatttattgtgtatcctt-ttttcaatcacacactattattatttttaatgatt-acaacacctaaattggaaacataatcctatcataattctcc 588  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||| |||  ||||||| |||| ||| ||||||||||||| ||| |||||| || || |    
T  46150689 attttttttattgtgtacccttcttttcaatcacacactattattgtttc-aatgatttacaaaaccgaaattggaaacatgatcatatcatgatcctac 46150591  T
Q  589 ttattctcttg 599  Q
    | |||||||||    
T  46150590 tcattctcttg 46150580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 48648208 - 48648250
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  48648208 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 48648250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 14871148 - 14871200
Alignment:
Q  428 taagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  14871148 taagagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 14871200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 480
Target Start/End: Complemental strand, 40872858 - 40872814
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  40872858 aagatccgttgacaccaggtgtcaacggattcattgacaccaaat 40872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 17605715 - 17605758
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  17605715 cgttgacaccaggtgtcaacggattcgttgacaccaaatttcaa 17605758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 31974656 - 31974703
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  31974656 gatccgttgacaccaagtgtcaacggattcgttgacaccaaatctcaa 31974703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 46150777 - 46150730
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  46150777 gatccgttgacactaggtgtcaacggattcgttgacaccaaatctcaa 46150730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 485
Target Start/End: Original strand, 981673 - 981719
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  981673 atccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 981719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 37987238 - 37987280
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  37987238 gatccgttgacaccaggtgtcaatggattcgttgacaccaaat 37987280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 51827546 - 51827500
Alignment:
Q  434 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||    
T  51827546 tcaagatccgttgacacctggtgtcaacggattcgttgtcaccaaat 51827500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 55373750 - 55373712
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  55373750 cgttgacaccaggtgtcaacggattcgttgacaccaaat 55373712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 11203248 - 11203207
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  11203248 atccgttgacaccaggtgtcaacaaattcgttgaaaccaaat 11203207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 20212986 - 20213027
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  20212986 atccgttgacaccaggtgtcaacgaattcgttgacaccaaat 20213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 31115647 - 31115598
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  31115647 gatccgttgacactaggtgtcaacagattcgttgacaccaaatctcaatc 31115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 44699861 - 44699824
Alignment:
Q  445 tgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    |||||||||||||||||||||||||||| |||||||||    
T  44699861 tgacaccaggtgtcaacggattcgttgacaccaaatat 44699824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 480
Target Start/End: Original strand, 48413329 - 48413366
Alignment:
Q  443 gttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||| |||||||    
T  48413329 gttgacaccaggtgtcaacggattcgttgacaccaaat 48413366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 52282459 - 52282418
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  52282459 atccgttgacaccaggtgtcaacggattcattgacaccaaat 52282418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 480
Target Start/End: Complemental strand, 17604002 - 17603967
Alignment:
Q  445 tgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||| |||||||    
T  17604002 tgacaccaggtgtcaacggattcgttgacaccaaat 17603967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 37520609 - 37520562
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  37520609 gatccgttgataccaggtgtcaacgaattcgttgacaccaaatctcaa 37520562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 41458042 - 41458085
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||    
T  41458042 cgttgataccaggtgtcaacggattcgttgacaccaaatctcaa 41458085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 45081451 - 45081404
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  45081451 gatccgttgacacctagtgtcaacggattcgttgacaccaaatctcaa 45081404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 48507080 - 48507033
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  48507080 gatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaa 48507033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 10847961 - 10847915
Alignment:
Q  434 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| ||||||||||||||| ||||| |||| |||||||    
T  10847961 tcaagatccgttaacaccaggtgtcaacagattcattgacaccaaat 10847915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 13477062 - 13477104
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| |||| |||| |||||||    
T  13477062 gatccgttgacaccaggtgtcaacgaattcattgacaccaaat 13477104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 20213579 - 20213537
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||    
T  20213579 gatccgttgacaccaggtgtcgacgaattcgttgacaccaaat 20213537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 37988266 - 37988224
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||    
T  37988266 gatccattgacaccaggtgtcaacgaattcgttgacaccaaat 37988224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 46149634 - 46149676
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  46149634 gatccattgacaccaggtgtcaatggattcgttgacaccaaat 46149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 48649221 - 48649179
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  48649221 gatccattgacaccaggtgtcaacagattcgttgacaccaaat 48649179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 48765118 - 48765076
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  48765118 gatccattgacaccaggtgtcaatggattcgttgacaccaaat 48765076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 51469327 - 51469285
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  51469327 gatccgttgacatcaagtgtcaacggattcgttgacaccaaat 51469285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 52605531 - 52605489
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||    
T  52605531 gatccgttgacaccaggtgtcaacgaattcgatgataccaaat 52605489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 54458713 - 54458671
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||| |||||||||||||| ||||| |||||||    
T  54458713 gatccgttgacacctggtgtcaacggattggttgacaccaaat 54458671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 13477820 - 13477779
Alignment:
Q  444 ttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||    
T  13477820 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 13477779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 33277551 - 33277510
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  33277551 atccgttgacaccaggtgtcaacgaattcgttaacaccaaat 33277510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 5e-27; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 492 - 609
Target Start/End: Original strand, 4433183 - 4433301
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcctatcataattctcctt 590  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||| ||  |||||||||| || ||| |||| | |||||||||    
T  4433183 ttttatttattgtgcatcctttctttcaatcacacactattattgttttaaatgattacaaaactcaaattggaaagatgatcgtatcttgattctcctt 4433282  T
Q  591 attctcttgtctgcaaaat 609  Q
    ||||| |||||||||||||    
T  4433283 attcttttgtctgcaaaat 4433301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 492 - 575
Target Start/End: Complemental strand, 4134752 - 4134668
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaacacctaaattggaaacataatcct 575  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||| |||||    
T  4134752 ttttatttattgtgtatcatttctttcaatcacacactattattgtttttaatgattacaaaacccaaattagaaacattatcct 4134668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 34309278 - 34309215
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattta 500  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||    
T  34309278 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttattta 34309215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 4433895 - 4433833
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatcttgattttattta 500  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  4433895 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaatgtttatttcattta 4433833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 4439254 - 4439192
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatcttgattttattta 500  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| || |||| |||||    
T  4439254 gatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaatgtttatttcattta 4439192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 25469134 - 25469092
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  25469134 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 25469092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 27256760 - 27256698
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 499  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  27256760 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgttgattttattt 27256698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 34308477 - 34308539
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 499  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  34308477 gatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgttgattttattt 34308539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 49680815 - 49680857
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  49680815 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 49680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 30663353 - 30663409
Alignment:
Q  429 aagactcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| ||| |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  30663353 aagagtcaggatccgttgacaccaggtatcaacggattcgttgacaccaaatctcaa 30663409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 45818023 - 45818067
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  45818023 aagatccgttgacaccaggtgtcaacggattcattgacaccaaat 45818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 482
Target Start/End: Complemental strand, 46391914 - 46391870
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  46391914 gatccgttgacaccaggtgtcaacggattcgttgacatcaaatat 46391870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 10121600 - 10121553
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  10121600 gatccgttgacaccaggtgtcaacggattggttgacaccaaatctcaa 10121553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 13262837 - 13262884
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  13262837 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 13262884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 13263564 - 13263517
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  13263564 gatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaa 13263517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 30664024 - 30663977
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  30664024 gatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaa 30663977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 30932843 - 30932796
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  30932843 gatccgttgacaccaggtgtcaacggattcgttggcaccaaatctcaa 30932796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 7559247 - 7559205
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  7559247 gatccgttgacaccaggtgtcaacggatccgttgacaccaaat 7559205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 10120787 - 10120829
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  10120787 gatccgttgacaccaggtgtcaacggattggttgacaccaaat 10120829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 11548804 - 11548866
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc-ttgattttattt 499  Q
    |||||||||||||||||||||||| |||||||||| || |||| |||||| || |||||||||    
T  11548804 gatccgttgacaccaggtgtcaacagattcgttgacactaaatctcaatcatttattttattt 11548866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 17171935 - 17171977
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  17171935 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 17171977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 17172710 - 17172676
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    |||||||||||||||||||||||||||||||||||    
T  17172710 gatccgttgacaccaggtgtcaacggattcgttga 17172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 19172623 - 19172581
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  19172623 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 19172581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 24991974 - 24992016
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  24991974 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 24992016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 47967866 - 47967908
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  47967866 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 47967908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 8988598 - 8988549
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||| ||||    
T  8988598 aagatccgctgacaccaggtgtcaacggattccttgacaccaaatctcaa 8988549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 46812237 - 46812188
Alignment:
Q  436 aagatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||    
T  46812237 aagattcgttaacaccaggtgtcaacggattcgttgacaccaaatctcaa 46812188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 8050550 - 8050486
Alignment:
Q  280 tttgaaccccaatcataacatctgacctaacaattttgacatgtttgtcggttgagctaaaactt 344  Q
    ||||||||||  |||||||||  | ||||||||||| ||||| ||||||||||||||||| ||||    
T  8050550 tttgaaccccggtcataacattcggcctaacaatttcgacatttttgtcggttgagctaagactt 8050486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 16939508 - 16939476
Alignment:
Q  283 gaaccccaatcataacatctgacctaacaattt 315  Q
    |||||||||||||||||||||||||||||||||    
T  16939508 gaaccccaatcataacatctgacctaacaattt 16939476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 168894 - 168941
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| ||||    
T  168894 gatccgttgacaccaggtgtcagcggattcattgacaccaaatctcaa 168941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 7406249 - 7406296
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||| |||| ||||||||| ||||||| ||||    
T  7406249 gatccgttgacaccaggtgttaacgaattcgttgacaccaaatctcaa 7406296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 8987794 - 8987841
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| ||||||| |||||||||||||||||||||| ||||||| ||||    
T  8987794 gatcggttgacatcaggtgtcaacggattcgttgacaccaaatctcaa 8987841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 25468514 - 25468561
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  25468514 gatccattgacaccaggtgtcaacggattcattgacaccaaatctcaa 25468561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 28181537 - 28181584
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||| |||||||||| ||||||||| ||||||| ||||    
T  28181537 gatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaa 28181584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 7558453 - 7558495
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||    
T  7558453 gatccgttgacaccaagtgtcaacggatttgttgacaccaaat 7558495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 11704856 - 11704814
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||    
T  11704856 gatccattgacaccaagtgtcaacggattcgttgacaccaaat 11704814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 13142715 - 13142681
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttga 472  Q
    ||||| |||||||||||||||||||||||||||||    
T  13142715 gatcccttgacaccaggtgtcaacggattcgttga 13142681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 19171782 - 19171824
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  19171782 gatccgttgacatcaagtgtcaacggattcgttgacaccaaat 19171824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 28182120 - 28182078
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||| ||||||||||||||||||||||||| |||| |||||||    
T  28182120 gatctgttgacaccaggtgtcaacggattctttgacaccaaat 28182078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 36390415 - 36390373
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| || |||||| |||||||    
T  36390415 gatccgttgacaccaggtgtcaacgaatccgttgacaccaaat 36390373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 37577693 - 37577651
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| |||| |||||||||||||||||||||||| |||||||    
T  37577693 gatccattgataccaggtgtcaacggattcgttgacaccaaat 37577651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 37853183 - 37853141
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||| ||| |||||||||||||||||||||| |||||||    
T  37853183 gatccgttaacatcaggtgtcaacggattcgttgacaccaaat 37853141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 44836123 - 44836216
Alignment:
Q  225 agatgaaatgataaagtcatcataaatccatacacacaaagtggagatgccgatgtttgaaccccaatcataacatctgacctaacaattttga 318  Q
    |||||| |||| |||| |||||||||  || ||| | ||||||||||| |||  ||| ||||||| ||||| || || ||||||||||||||||    
T  44836123 agatgagatgacaaagccatcataaactcacacatataaagtggagataccggggttcgaaccccgatcatgacgtccgacctaacaattttga 44836216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 439 - 487
Target Start/End: Original strand, 39901 - 39949
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaatc 487  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39901 atccgttgacaccaggtgtcaacggattcgttgacaccaaatattaatc 39949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 438 - 482
Target Start/End: Original strand, 234705 - 234749
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  234705 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatat 234749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 438 - 482
Target Start/End: Complemental strand, 237868 - 237824
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  237868 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatat 237824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 438 - 482
Target Start/End: Original strand, 19359708 - 19359752
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  19359708 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatat 19359752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 6476838 - 6476791
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6476838 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 6476791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 29046033 - 29046080
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  29046033 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 29046080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 7632099 - 7632141
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  7632099 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 7632141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 548
Target Start/End: Complemental strand, 9408026 - 9407968
Alignment:
Q  491 attttatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 548  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  9408026 attttatttattgtgtatcctctttttcaatcacacactattattgtattcaatgatta 9407968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 19128774 - 19128816
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  19128774 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 19128816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 548
Target Start/End: Original strand, 19128861 - 19128919
Alignment:
Q  491 attttatttattgtgtatcct-tttttcaatcacacactattattatttttaatgatta 548  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  19128861 attttatttattgtgtatcctctttttcaatcacacactattattgtattcaatgatta 19128919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 482
Target Start/End: Complemental strand, 19360523 - 19360479
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatat 482  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  19360523 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaatat 19360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 551
Target Start/End: Complemental strand, 22212936 - 22212876
Alignment:
Q  492 ttttatttattgtgtatccttt-tttcaatcacacactattattatttttaatgattacaa 551  Q
    |||||||||||||||||| ||| ||||||| |||||| |||||| ||||||||||||||||    
T  22212936 ttttatttattgtgtatcatttctttcaattacacacgattattgtttttaatgattacaa 22212876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 235596 - 235643
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  235596 gatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaa 235643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 477
Target Start/End: Complemental strand, 1283572 - 1283533
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaacca 477  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1283572 gatccgttgacaccaggtgtcaacggattcgttgacacca 1283533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 477
Target Start/End: Original strand, 10554526 - 10554565
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaacca 477  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  10554526 gatccgttgacaccaggtgtcaacggattcgttgacacca 10554565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 10554555 - 10554598
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  10554555 cgttgacaccaggtgtcaacggattcgttgacaccaaatctcaa 10554598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 27364534 - 27364487
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  27364534 gatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaa 27364487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 28705926 - 28705879
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  28705926 gatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaa 28705879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 1281840 - 1281882
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  1281840 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 1281882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 1283543 - 1283505
Alignment:
Q  442 cgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  1283543 cgttgacaccaggtgtcaacggattcgttgacaccaaat 1283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 1554130 - 1554088
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  1554130 gatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 1554088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 14478925 - 14478967
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  14478925 gatccgttgacatcaggtgtcaacggattcgttgacaccaaat 14478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 25858214 - 25858256
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  25858214 gatccgttgacactaggtgtcaacggattcgttgacaccaaat 25858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 485
Target Start/End: Original strand, 28705170 - 28705216
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||    
T  28705170 atccgttgacaccaggtgtcaacggattcgtttacaccaaatctcaa 28705216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 29087929 - 29087971
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  29087929 gatccgttgacaccaggtgtcaacggattcattgacaccaaat 29087971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 236976 - 236929
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  236976 gatccattgacaccaggtgtcaacggattcgtagacaccaaatctcaa 236929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 4084884 - 4084931
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||||| |||||||||| ||||||||| ||||||| ||||    
T  4084884 gatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaa 4084931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 17071228 - 17071275
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  17071228 gatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaa 17071275  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 480
Target Start/End: Original strand, 22798904 - 22798947
Alignment:
Q  437 agatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||| | |||||||||||||||||||||| |||||||    
T  22798904 agatccgttgatatcaggtgtcaacggattcgttgacaccaaat 22798947  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 34600265 - 34600312
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  34600265 gatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaa 34600312  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 480
Target Start/End: Complemental strand, 34709089 - 34709042
Alignment:
Q  433 ctcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||| |||| |||||||||||||||||||||||||||||  |||||||    
T  34709089 ctcaggatctgttgacaccaggtgtcaacggattcgttggcaccaaat 34709042  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 38056798 - 38056845
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| ||||    
T  38056798 gatctgttgacaccaggtgtcaacggattggttgacaccaaatttcaa 38056845  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 17071841 - 17071799
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  17071841 gatccgttgacaccaggtgttaacgaattcgttgacaccaaat 17071799  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 20854952 - 20854910
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||| || ||||||||||| |||||||    
T  20854952 gatccgttgacaccaggtgttaatggattcgttgacaccaaat 20854910  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 36038699 - 36038741
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  36038699 gatccgttgacaccaggtatcaacggattcgttaacaccaaat 36038741  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 38057642 - 38057600
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||    
T  38057642 gatccgttgacactaggtgtcaacggattggttgacaccaaat 38057600  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 43510236 - 43510278
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||| |||||||| | |||||||    
T  43510236 gatccgttgacaccaggtgtcaacagattcgttaacaccaaat 43510278  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 22799806 - 22799765
Alignment:
Q  439 atccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  22799806 atccgttgacaccaggtgtcaatgaattcgttgacaccaaat 22799765  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 480
Target Start/End: Complemental strand, 27363812 - 27363779
Alignment:
Q  447 acaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||||||||||||| |||||||    
T  27363812 acaccaggtgtcaacggattcgttgacaccaaat 27363779  T

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Target: scaffold0176 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 26596 - 26638
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  26596 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 26638  T

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Target: scaffold0085 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 22118 - 22076
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  22118 gatccgttgacaccaggtgtcaacggattcgttgacaccaaat 22076  T

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Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 15900 - 15859
Alignment:
Q  444 ttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||    
T  15900 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaa 15859  T

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Target: scaffold1213 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 1896 - 1942
Alignment:
Q  434 tcaagatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||    
T  1896 tcaagatccgttgacagcagatgtcaacggattcgttgacaccaaat 1942  T

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Target: scaffold0504 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 5427 - 5385
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  5427 gatccgttgacaccaggtgtcaacggatttgttgacaccaaat 5385  T

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Target: scaffold2007 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Original strand, 755 - 802
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||||||||||| |||||||||||||||| ||||||| ||||    
T  755 gatccattgacaccaggtttcaacggattcgttgacaccaaatctcaa 802  T

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Target: scaffold0093 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 23776 - 23729
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaatatcaa 485  Q
    ||||| |||||||||| |||||||||||||||||| ||||||| ||||    
T  23776 gatccattgacaccagttgtcaacggattcgttgacaccaaatctcaa 23729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 480
Target Start/End: Original strand, 1591 - 1633
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaat 480  Q
    |||| |||||||||||||||||||| ||||||||| |||||||    
T  1591 gatcggttgacaccaggtgtcaacgaattcgttgacaccaaat 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 479
Target Start/End: Complemental strand, 6932 - 6891
Alignment:
Q  438 gatccgttgacaccaggtgtcaacggattcgttgaaaccaaa 479  Q
    ||||||||||||||||||||||||  ||||||||| ||||||    
T  6932 gatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 472
Target Start/End: Original strand, 181019 - 181048
Alignment:
Q  443 gttgacaccaggtgtcaacggattcgttga 472  Q
    ||||||||||||||||||||||||||||||    
T  181019 gttgacaccaggtgtcaacggattcgttga 181048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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