View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2454_low_5 (Length: 362)
Name: NF2454_low_5
Description: NF2454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2454_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 33885833 - 33886163
Alignment:
| Q |
24 |
caaacaaccttgtttgattcttttcttttttgtgtgactctttaatgcattcttaagtgtagctgattttgaatattgtggacaatttctattttacagc |
123 |
Q |
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| T |
33885833 |
caaacaaccttgtttgattcttttcttttttgtgtgactctttaatgcattcttaagtgtagctgattttgaatattgtggacaatttctattttacagc |
33885932 |
T |
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| Q |
124 |
cactggtgaaaactgcaagggagacccttatgagaatgttatattcttgcatggatttatgtgttcttcctcattttggactcaaacagcgtttccatgt |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
33885933 |
cactggtgaaaactgcaagggagacccttatgagaatgttatattcttgcatggatttatgtgttcttcctcattttggactcaaacagtgtttccatgt |
33886032 |
T |
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| Q |
224 |
ttctctgaaaatgtaaatcataattacagattgattgcaatagacctgttgggatttggaaagagtccaaagccaagagattgtttgtacacattgaagg |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33886033 |
ttctctgaaaatgtaaatcataattacagattgattgcaatagacctgttgggatttggaaagagtccaaagccaagagattgtttgtacacattgaagg |
33886132 |
T |
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| Q |
324 |
atcatgtggaaatgattgagaaatctgtggt |
354 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
33886133 |
atcatgtggaaatgattgagaaatctgtggt |
33886163 |
T |
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