View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2454_low_8 (Length: 322)
Name: NF2454_low_8
Description: NF2454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2454_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25410902 - 25411124
Alignment:
| Q |
1 |
cccacaacatctttcttctcaataacttctcccgcttctttcttcaattnnnnnnnnnnnnnn--taatcagactcactatgtttaacaaaggcaatatc |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || |
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| T |
25410902 |
cccacaacatctttcttctcaataacttctcccgcttctttcttcaattacacacacacacacactaatcagactcactatgtttaacaaaggccatttc |
25411001 |
T |
|
| Q |
99 |
cttgtataaaggggtgtcaatgggtcaggggtagtaaagaaacacttaaggagacacaataataatatgaaaaaatggaaatgattgaatatagccacat |
198 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25411002 |
cttgtataaaggggtgtcaatggggcaggggtagtaaagaaacacttaagcagacacaataataatatgaaaaaatggaaatgattgaatatagccacat |
25411101 |
T |
|
| Q |
199 |
tcgctgtgtgtcggtgctacata |
221 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
25411102 |
tcgctgtgtgtcggtgctacata |
25411124 |
T |
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