View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2455_low_2 (Length: 539)
Name: NF2455_low_2
Description: NF2455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2455_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 508; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 18 - 529
Target Start/End: Complemental strand, 15824008 - 15823497
Alignment:
| Q |
18 |
aatctgatattactggtttgttgaagggtttggatctttctgggaattgggagagagcttttttgttgtttgaatgggtttggttgaattttgggtctga |
117 |
Q |
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| T |
15824008 |
aatctgatattactggtttgttgaagggtttggatctttctgggaattgggagagagcttttttgttgtttgaatgggtttggttgaattttgggtctga |
15823909 |
T |
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| Q |
118 |
aaatatgaaggtggatgatcaatctgttgaatttatggttaagatgttaggtagagaatcacaatattcaattgcttctaagttgtttgatataattcct |
217 |
Q |
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| T |
15823908 |
aaatatgaaggtggatgatcaatctgttgaatttatggttaagatgttaggtagagaatcacaatattcaattgcttctaagttgtttgatataattcct |
15823809 |
T |
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| Q |
218 |
gttgaagaatattcacttgatgttaaggcttgtactactgttcttcatgcttatgcgcgaaccgggaagtataaacgggctattgagatttttgagaaga |
317 |
Q |
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| T |
15823808 |
gttgaagaatattcacttgatgttaaggcttgtactactgttcttcatgcttatgcgcgaaccgggaagtataaacgggctattgagatttttgagaaga |
15823709 |
T |
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| Q |
318 |
tgaaagagactggtcttgatccaactttggttacttacaatgttatgcttgatgtttatgggaagatgggtcgggcttggagtatgattttggagttgtt |
417 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15823708 |
tgaaggagactggtcttgatccaactttggttacttacaatgttatgcttgatgtttatgggaagatgggtcgggcttggagtatgattttggagttgtt |
15823609 |
T |
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| Q |
418 |
ggatgagatgaggagtaaagggcttgagtttgatgagtttacgtgtaccactgtgatatctgcttgtgggagagagggtatacttgatgaagcaaggagg |
517 |
Q |
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| T |
15823608 |
ggatgagatgaggagtaaagggcttgagtttgatgagtttacgtgtaccactgtgatatctgcttgtgggagagagggtatacttgatgaagcaaggagg |
15823509 |
T |
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| Q |
518 |
ttttttgatgat |
529 |
Q |
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| T |
15823508 |
ttttttgatgat |
15823497 |
T |
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