View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2455_low_9 (Length: 290)
Name: NF2455_low_9
Description: NF2455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2455_low_9 |
 | |
|
| [»] scaffold0440 (1 HSPs) |
| | |
|
| [»] scaffold0500 (1 HSPs) |
| | |
|
| [»] scaffold0063 (1 HSPs) |
| | |
|
| [»] scaffold0352 (1 HSPs) |
| | |
|
| [»] scaffold0665 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 22626959 - 22627220
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22626959 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
22627058 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22627059 |
atgtgaaggatgattgactcttagttttgatggtttcccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtcaaccctt |
22627158 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22627159 |
catctgaaaacgcctctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
22627220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 11139215 - 11139477
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaa-aggattcata |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
11139215 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcaaagctaaagtataagataactaacataagaaaaaaggattcata |
11139314 |
T |
|
| Q |
110 |
catgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11139315 |
catgtgaaggatgattgactcttagttttgatggtttcccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtcaaccct |
11139414 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11139415 |
tcatctgaaaacgcctctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
11139477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 39564157 - 39564413
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39564157 |
taggattacatcagatttatctcaggaattaaccacaaaa---ttagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
39564253 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttca |
212 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | |
|
|
| T |
39564254 |
gtaaaggatgattgactcttagttttgatggtttcccaccatatctccaagtctctgctccaaaatatgcctttaggtctccaaattcgtcaacccctaa |
39564353 |
T |
|
| Q |
213 |
tctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
39564354 |
tctgaaaacgcctctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
39564413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 271
Target Start/End: Original strand, 1096863 - 1097124
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
||||| |||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1096863 |
catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataagttaactaacataagaaaaaggattcatac |
1096961 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctcc---aagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacc |
207 |
Q |
| |
|
|||| | |||||||||||| | |||| |||||||| ||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1096962 |
atgtaatggatgattgactatgagttgtgatggttgcccaccagatctgcaaaaagtttctgctccaaaatatg-ttttaggtctcaaaattcgtgaacc |
1097060 |
T |
|
| Q |
208 |
cttcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaat |
271 |
Q |
| |
|
| | |||||||||||| ||| ||||||||||| | ||| ||||||||| ||||||||||| |
|
|
| T |
1097061 |
cctaatctgaaaacgcacttttctatttataagcctgcgaaattcggccaccgtgctccaaaat |
1097124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 31878360 - 31878527
Alignment:
| Q |
55 |
attagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacatgtgaaggatgattgactcttagttttgatggttttccaccag |
154 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||| || |||||||||||||||| |||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
31878360 |
attagttactcatagctaaagtacaaaataactaacataaaaacaaggattcatacatgtattggatgattgactatgagttttgatggttgcccaccag |
31878459 |
T |
|
| Q |
155 |
atctccaagtctc-tgctccaaaatatgcctttaggtctcaaaattcgtgaacccttcatctgaaaacg |
222 |
Q |
| |
|
|||| ||| ||| |||||||||||||||| |||||||||||||||| |||||| || |||||||||| |
|
|
| T |
31878460 |
atctgcaaagctcatgctccaaaatatgcc-ttaggtctcaaaattcatgaacctttattctgaaaacg |
31878527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 9608 - 9347
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9608 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
9509 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
9508 |
atgtgaaggatgattgactcttagttttgatggtttcccactagatctctaagtctctactccaaaatatgtccttaggtctcaaaattcgtgaaccctt |
9409 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9408 |
catctgaaaacgcctctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
9347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 33574687 - 33574444
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33574687 |
catagggttacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
33574588 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || |
|
|
| T |
33574587 |
atgtgaaggatgattgactcttagttttgatggtttcccaccagatctccaagtctctgctccaaattatgcttttaggtctcaaaattcgtgaaccttt |
33574488 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcgg |
254 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
33574487 |
catctgaaaacgcctttttatatttataagcaagtcaaaatcgg |
33574444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 26712993 - 26713249
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26712993 |
taggattacatcagatttatctcaggaattaaccacaaaa---ttagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
26713089 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttca |
212 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | |
|
|
| T |
26713090 |
gtaaaggatgattgactcttagttttgatggtttcccaccagatctccaagtctctgctccaaaatatgcctttaggtctccaaattcgtcaacccctaa |
26713189 |
T |
|
| Q |
213 |
tctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||||| |
|
|
| T |
26713190 |
tctgaaaacgcctctttatatttataagcaagtcaaaatcggccaccgtgcaccaaaatc |
26713249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 26982731 - 26982987
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26982731 |
taggattacatcagatttatctcaggaattaaccacaaaa---ttagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
26982827 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttca |
212 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | |
|
|
| T |
26982828 |
gtaaaggatgattgactcttagttttgatggtttcccaccagatctccaagtctctgctccaaaatatgcctttaggtctccaaattcgtcaacccctaa |
26982927 |
T |
|
| Q |
213 |
tctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||||| |
|
|
| T |
26982928 |
tctgaaaacgcctctttatatttataagcaagtcaaaatcggccaccgtgcaccaaaatc |
26982987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 15543029 - 15543226
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15543029 |
catagggttacatcagattcatctcatgaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaacggattcatac |
15543128 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccc |
208 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15543129 |
atgtgaaggaagattgactcttagttttgatggttccccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccc |
15543226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 15532847 - 15533044
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
15532847 |
catagggttacatcagattcatctcatgaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaacggattcatcc |
15532946 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccc |
208 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15532947 |
atgtgaaggaagattgactcttagttttgatggttccccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccc |
15533044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 14617075 - 14617221
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||| |||||||| ||| ||||| |||||| || |||||||||||| |
|
|
| T |
14617075 |
cataggattacatcatattcatctcaagc-ttaaccagaaagagattagttactcataactaaagtacaagataactcacataaaaacaaggattcatac |
14617173 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct |
158 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| |
|
|
| T |
14617174 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatct |
14617221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 259
Target Start/End: Complemental strand, 34405447 - 34405201
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | ||||||||||| |
|
|
| T |
34405447 |
cataggattacatcagattcatctcaagc-tgaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatat |
34405349 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatc-tccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| ||| || ||| ||| ||||| |||||||||||| |||| ||| ||||||||||| |
|
|
| T |
34405348 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctcc-aaatatgccttt-tctctctaaaatcgtgaaccct |
34405251 |
T |
|
| Q |
210 |
tcatctgaaaac-gcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | ||||||| | || ||| ||||||||||| |||||||||||||||| |
|
|
| T |
34405250 |
ccctttgaaaacagact-tttctatttataagcctgtcaaaatcggccacc |
34405201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 22159340 - 22159212
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
|||||||||||| ||||||||||| | ||||||||| |||||||||||||| |||||||| ||| ||||| |||||| || |||||||||||||| |
|
|
| T |
22159340 |
taggattacatcggattcatctcattc-tcaaccacaaagagattagttactcataactaaagtacaagataactcacataaaaacaaggattcatacat |
22159242 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatg |
142 |
Q |
| |
|
|| |||||||||||| | |||| ||||| |
|
|
| T |
22159241 |
gtattggatgattgactatgagttgtgatg |
22159212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 254
Target Start/End: Complemental strand, 12171580 - 12171338
Alignment:
| Q |
12 |
ataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcataca |
111 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12171580 |
atagggttacatcagattcatctcagaaattaaccacaaaagaattagttactcatagctaaagtagaagctaactaacataagaaaaaggattcataca |
12171481 |
T |
|
| Q |
112 |
tgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttc |
211 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
12171480 |
tgtgacggatgatttactcttagttttgatggtttcccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccccta |
12171381 |
T |
|
| Q |
212 |
atctgaaaacgcctatttatatttataagcaggtcaaaatcgg |
254 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12171380 |
atctgaaaacgcctctttatatttataagcaggtcaaaatcgg |
12171338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 259
Target Start/End: Original strand, 647850 - 648096
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | ||||||||||| |
|
|
| T |
647850 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatat |
647948 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| ||| | ||| |||||||| |||| |||| |||| ||| ||||||||||| |
|
|
| T |
647949 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctccaaa-tatgtcttttc-tctctaaaatcgtgaaccct |
648046 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | |||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
648047 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacc |
648096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 259
Target Start/End: Original strand, 651123 - 651369
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | ||||||||||| |
|
|
| T |
651123 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatat |
651221 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| ||| | ||| |||||||| |||| |||| |||| ||| ||||||||||| |
|
|
| T |
651222 |
atgtatgggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctccaaa-tatgtcttttc-tctctaaaatcgtgaaccct |
651319 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | |||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
651320 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacc |
651369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 26063340 - 26063457
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||| |||||||| |||||||||||| | | ||||||||| ||||||||||||||| |||||||| ||| ||||| |||||| || |||||||||||| |
|
|
| T |
26063340 |
catatgattacattagattcatctca-gtctcaaccacaaagaaattagttactcatatctaaagtacaagataactcacataaaaacaaggattcatac |
26063438 |
T |
|
| Q |
111 |
atgtgaaggatgattgact |
129 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
26063439 |
atgtattggatgattgact |
26063457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 23760255 - 23760516
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23760255 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
23760354 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23760355 |
aagtgaaggatgattgactcttagttttgatggtttcccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
23760454 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
| || |||||| ||| || |||||||| || | ||||||||||||| ||||||||||| |
|
|
| T |
23760455 |
cttcagaaaacacctcttactatttataggctaataaaaatcggccaccgagctccaaaatc |
23760516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 11279091 - 11278849
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11279091 |
catagggttacatcagattcatctcacgaattaaccacaaaagaattagttactcataggtaaagtataagctaactaacataagaaaaatgattcatac |
11278992 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11278991 |
atgtaaaggatgattgactcttagttttgatggttgcccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
11278892 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcgg |
254 |
Q |
| |
|
||| | |||| ||| |||||||||||| |||||| |||||||| |
|
|
| T |
11278891 |
aatcag-aaacacctctttatatttataggcaggtaaaaatcgg |
11278849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 272
Target Start/End: Complemental strand, 33312591 - 33312341
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33312591 |
taggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataagctaa---------gaaaaaggattcatacat |
33312501 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttca |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | |
|
|
| T |
33312500 |
gtgaaggatgattgactcttagtttcgatggtttcccaccatatctccaagtctctgcttcaaaatatgtctttaggtctcaaaattcgtgaccccttaa |
33312401 |
T |
|
| Q |
213 |
tctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|| |||||| ||| |||||||||||| ||| || ||||||||||||| ||||||||||| |
|
|
| T |
33312400 |
tcagaaaacacctctttatatttataggcaagtaaaaatcggccaccgagctccaaaatc |
33312341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 294463 - 294202
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
294463 |
cataggattacatcagattcatctcagga-ttaaccacaagagaattagttactcatagctaaagtataagctaactaacataagaagaaagattcatac |
294365 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctcc-aagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| | |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
294364 |
atgtaatggatgattgactattagttttgatggttgctcaccagatctccaaagtctctgctccaaaatatgcttttaggtctcaaaattcgtgaaccct |
294265 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
| || |||||| || ||||||||||||||| | | ||||||||||||| |||||||||||| |
|
|
| T |
294264 |
taatatgaaaaagcacctttatatttataagctgataaaaatcggccaccgtgctccaaaatc |
294202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 6966746 - 6966487
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
6966746 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
6966648 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| ||| | ||| |||||||| ||||||||| |||| ||| ||||||||||| |
|
|
| T |
6966647 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctccaaa-tatgccttttc-tctctaaaatcgtgaaccct |
6966550 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
6966549 |
tcatctgaaaacgcctctttatatttataagcaggtcaaaatcggccatcgtgctccaaaatc |
6966487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 272
Target Start/End: Original strand, 35773179 - 35773437
Alignment:
| Q |
12 |
ataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcataca |
111 |
Q |
| |
|
|||||||||||| |||||||||||| | | ||||||||| |||||||||||||| |||| ||| ||| ||||| |||||| || ||||||||||||| |
|
|
| T |
35773179 |
ataggattacataagattcatctca-gtctcaaccacaaacagattagttactcatatctaacgtacaagataactcacataaaaacaaggattcataca |
35773277 |
T |
|
| Q |
112 |
tgtgaaggatgattgactcttagttttgatggttttccaccagatct-ccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
||| |||||||||||| | |||| ||||||| | |||||| |||| | ||| ||| ||||| || ||| |||| |||| ||| ||||||||| | |
|
|
| T |
35773278 |
tgtattggatgattgactatgagttgtgatggtctcccaccaaatctacaaagcctccgctcc-aattatctcttt-tctctctaaaatcgtgaacctct |
35773375 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|| |||||| || | ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35773376 |
aatatgaaaatgcttctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
35773437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 24783004 - 24782858
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||| ||| ||||| |||||| || |||||||||||| |
|
|
| T |
24783004 |
cataggattacatcagattcatcttaagc-ttaaccacaaaaagattagttactcataactaaagtacaagataactcacataaaaacaaggattcatac |
24782906 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct |
158 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| |
|
|
| T |
24782905 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatct |
24782858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 17863741 - 17863988
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
17863741 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
17863839 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| ||| | ||| |||||||| |||| |||| |||| ||| ||||||||||| |
|
|
| T |
17863840 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctccaaa-tatgtcttttc-tctctaaaatcgtgaaccct |
17863937 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacca |
260 |
Q |
| |
|
| | |||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
17863938 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacca |
17863988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 17867000 - 17867247
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
17867000 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
17867098 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatc-tccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||| | ||| || ||| ||| ||||| |||||||||||| |||| ||| ||||||||||| |
|
|
| T |
17867099 |
atgtattggataattgactatgagttgtgatggtctcccactaaatcttcaaagcctccgctcc-aaatatgccttt-tctctctaaaatcgtgaaccct |
17867196 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacca |
260 |
Q |
| |
|
| | |||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
17867197 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacca |
17867247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 46846956 - 46847007
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagtta |
62 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
46846956 |
catagggttacatcagattcatctcaggaattaaccacaaaagaattagtta |
46847007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 24782852 - 24782802
Alignment:
| Q |
222 |
gcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
24782852 |
gcctctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
24782802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 13017836 - 13018097
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13017836 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaacgtataagctaactaacacaagaaaaaggattcatac |
13017935 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13017936 |
atgtgaaggatgattgactcttagttttgatggtttccaaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
13018035 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
| || |||||||||| || |||||||| || | ||||||||||||| ||||| ||||| |
|
|
| T |
13018036 |
cttcagaaaacgcctcttactatttataggctaatgaaaatcggccaccgagctccgaaatc |
13018097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 22247158 - 22246896
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22247158 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagcgaaagtataagctaactaacataagaaaaaggattcatac |
22247059 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgc-tccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||| || |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22247058 |
atgtgaagaatgattgactcttagttttgatggtttcccaccggatctctaagtctcagcttccaaaatatgcttttaggtctcaaaattcgtgaacccc |
22246959 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|| || |||||| ||| ||| ||||||| || | ||||||||||||| ||||||||||| |
|
|
| T |
22246958 |
tcttccgaaaacacctctttccatttataggctaataaaaatcggccaccgagctccaaaatc |
22246896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 22221323 - 22221175
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22221323 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagcgaaagtataagctaactaacataagaaaaaggattcatac |
22221224 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctc |
159 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
22221223 |
atgtgaagaatgattgactcttagttttgatggtttcccaccggatctc |
22221175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 32426967 - 32426792
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||| || |||||||||||| |
|
|
| T |
32426967 |
cataggattatatcatattcatctcaagc-ttaaccacaaaagaattagttactcctagctaaagtacaagataactaacgtaaaaacaaggattcatac |
32426869 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctcc-aagtctctgctccaaaatatgccttt |
186 |
Q |
| |
|
|||| |||||||||||| | ||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
32426868 |
atgtattggatgattgactatgagttttgatggttgcccaccagatctccaaagtctccgctccaaaatatgccttt |
32426792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 272
Target Start/End: Original strand, 19665311 - 19665570
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| | | ||||||||| |||||||||||||| ||||||| ||| ||||| |||||| || |||||||||||| |
|
|
| T |
19665311 |
cataggattacatcagattcatctca-gtctcaaccacaaagagattagttactcatatataaagtacaagataactcacataaaaacaaggattcatac |
19665409 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||||||||||| | |||| ||||||| | |||||| |||| ||| | ||| ||||||| ||| |||| |||| ||| |||||||||| |
|
|
| T |
19665410 |
atgtattggatgattgactatgagttgtgatggtctcccaccaaatctacaaagcctccgctccaat-tatctcttttc-tctctaaaatcgtgaacccc |
19665507 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19665508 |
tcatctgaaaatgcttctttatatttataagcaggtcaaaatcggccaccgtgctccaaaatc |
19665570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 48 - 222
Target Start/End: Complemental strand, 32426748 - 32426574
Alignment:
| Q |
48 |
caaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacatgtgaaggatgattgactcttagttttgatggtttt |
147 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| |||||||| ||| || |||||||||||| ||| |||||||||||| | ||||||||||||| |
|
|
| T |
32426748 |
caaaagaattagttactcctagctaaagtacaagataactaacgtaaaaacaaggattcatacgtgtattggatgattgactatgagttttgatggttgc |
32426649 |
T |
|
| Q |
148 |
ccaccagatctcc-aagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttcatctgaaaacg |
222 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||| |||| ||| |||||||||||| |||||||||| |
|
|
| T |
32426648 |
tcaccagatctccaaagtctccgctccaaaatatgccttt-tctctctaaaatcgtgaacccttattctgaaaacg |
32426574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 15534687 - 15534428
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||| ||| ||||| |||||| || ||||||||||| |
|
|
| T |
15534687 |
cataggattacatcagattcatctcaatc-tcaaccacaaagagattagttactcatatctaaagtacaagataactcacataaaaacaaggattcatat |
15534589 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct-ccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||||||||||| | |||| ||||||| | |||||| |||| | ||| ||| ||||| || ||| |||| |||| ||| |||||||||| |
|
|
| T |
15534588 |
atgtattggatgattgactatgagttgtgatggtctcccaccaaatctacaaagcctccgctcc-aattatctcttt-tctctctaaaatcgtgaacccc |
15534491 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
| ||||||||| || ||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
15534490 |
taatctgaaaatgctactttatatttataaacaggtcaaaatcggccaccgtgctccaaaatc |
15534428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 259
Target Start/End: Complemental strand, 14790217 - 14789971
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
14790217 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
14790119 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatc-tccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| ||| || ||| ||| ||||| |||||||||||| |||| ||| ||||||||||| |
|
|
| T |
14790118 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctcc-aaatatgccttt-tctctctaaaatcgtgaaccct |
14790021 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | |||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
14790020 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacc |
14789971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 1838072 - 1837926
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| | | ||||||||| |||||||||||||| |||||||| ||| ||||| |||||| || |||| ||||||| |
|
|
| T |
1838072 |
cataggattacatcagattcatctca-gtctcaaccacaaagagattagttactcatatctaaagtacaagataactcacataaaaataaggtttcatac |
1837974 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct |
158 |
Q |
| |
|
|||| |||||||||||| | |||| ||||||| | |||||| |||| |
|
|
| T |
1837973 |
atgtattggatgattgactatgagttgtgatggtctcccaccaaatct |
1837926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 259
Target Start/End: Complemental strand, 14795245 - 14794999
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
14795245 |
cataggattacatcagattcatctcaagc-ttaaccatgaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
14795147 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatc-tccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||| | ||| || ||| ||| ||||| |||||||||||| |||| ||| ||||||||||| |
|
|
| T |
14795146 |
atgtattggataattgactatgagttgtgatggtctcccacaaaatcttcaaagcctccgctcc-aaatatgccttt-tctctctaaaatcgtgaaccct |
14795049 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | |||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
14795048 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacc |
14794999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 271
Target Start/End: Complemental strand, 15537882 - 15537620
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||| |||||||||| |||||||||| | | ||||||||| |||||||||||||| |||| ||| ||| ||||| |||||| || ||||| |||||| |
|
|
| T |
15537882 |
catatgattacatcaaattcatctca-gtctcaaccacaaagagattagttactcatatctaatgtacaagataactcacataaaaacaaggagtcatac |
15537784 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtct-ctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| ||||||||||| | |||| ||||||| | |||||| |||| ||| || | |||||||| ||| |||| |||| ||| |||||||||| |
|
|
| T |
15537783 |
atgtattagatgattgactatgagttgtgatggtctcccaccaaatctacaaagcttccgctccaaa-tatctcttttc-tctctaaaatcgtgaacccc |
15537686 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagc----aggtcaaaatcggccaccatgctccaaaat |
271 |
Q |
| |
|
| ||||||||| || | ||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
15537685 |
taatctgaaaatgcttctttatatttataagcgcgcaggtcaaaatcggccaccgtgctccaaaat |
15537620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 32704900 - 32705046
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
32704900 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
32704998 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct |
158 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| |
|
|
| T |
32704999 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatct |
32705046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 272
Target Start/End: Complemental strand, 31626144 - 31625885
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |
|
|
| T |
31626144 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactcacataagaaaaatgattcgtacat |
31626045 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttca |
212 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
31626044 |
gtaaaggatgattgactcatagttttgatggttgcccaccagatctccaagtatctgctccaaaatatgtctttaggtctcaaaattcgtgaacccttaa |
31625945 |
T |
|
| Q |
213 |
tctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
|| |||||| || |||||||||||| |||||| ||||||||||||| ||||||||||| |
|
|
| T |
31625944 |
tcagaaaacaactctttatatttataggcaggtaaaaatcggccaccgcgctccaaaatc |
31625885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 31527988 - 31527727
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
31527988 |
cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaacggattcatac |
31527889 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31527888 |
atgtgaaggaagattgactcttagttttgatggttccccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccct |
31527789 |
T |
|
| Q |
211 |
catctgaaaacgcctatttatatttataagcaggtcaaaatcggccaccatgctccaaaatc |
272 |
Q |
| |
|
| || |||||| ||| || |||||||| || | ||||||||||||| |||| |||||| |
|
|
| T |
31527788 |
cttcagaaaacacctcttactatttataggctaataaaaatcggccaccgagctcaaaaatc |
31527727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 13709670 - 13709479
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13709670 |
cataggattacatcagattcatctca-gaattaaccacaagagaattagttactcatagctaaagtataagctaactaacataagaataaggattcatac |
13709572 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtg |
203 |
Q |
| |
|
|||| | |||||||||||| ||||||||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13709571 |
atgtaatggatgattgactattagttttgatggttgcccaccagatctgcaacgcctctgctccaaaatatg-ctttaggtctcaaaattcgtg |
13709479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 40017576 - 40017378
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
40017576 |
cataggattacatcatattcatctcaagc-ttaaccacaaaagaattagttactcatagttaaagtataagctaactaacataggaagaaggattcatac |
40017478 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct-ccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| | |||||| ||||| | ||||||||||||| |||||||||| | | ||| ||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
40017477 |
atgtaatggatgactgactatgagttttgatggttgtccaccagatatgcaaagcttctactccaaaatatg-ctttaggtctcaaaattcgtgaaccct |
40017379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 36326523 - 36326273
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggatt----c |
106 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||| || ||||||| | |
|
|
| T |
36326523 |
cataggattacatcagattcatctcaagc-ttaaccacaaaagaattagttactcatagataaagtacaagataactaacgtaaaaacaaggattgattc |
36326425 |
T |
|
| Q |
107 |
atacatgtgaaggatgattgactcttagttttgatggttttccaccagatctccaagt-ctctgctccaaaatatgcctttaggtctcaaaattcgtgaa |
205 |
Q |
| |
|
|||| ||| |||||||||||| | ||||||||||||| ||| ||||||||||| | ||||||||||| ||||| |||| |||| ||| ||||||| |
|
|
| T |
36326424 |
atacgtgtattggatgattgactatgagttttgatggttggccatcagatctccaaatcctctgctccaatatatgtcttt-tctctctaaaatcgtgaa |
36326326 |
T |
|
| Q |
206 |
cccttcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccac |
258 |
Q |
| |
|
||||| | |||||| | ||| ||||||||||| ||||||||||||||| |
|
|
| T |
36326325 |
cccttactttgaaaatggacttttctatttataagcctgtcaaaatcggccac |
36326273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 32576333 - 32576478
Alignment:
| Q |
12 |
ataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcataca |
111 |
Q |
| |
|
|||||||||||||| |||||||| ||| | ||||||||| |||||||| | |||||||||||| ||| |||||||||||| || ||||||||||||| |
|
|
| T |
32576333 |
ataggattacatcatattcatct-aagtctcaaccacaaagagattagttattgatagctaaagtagaagataactaacataaaaacaaggattcataca |
32576431 |
T |
|
| Q |
112 |
tgtgaaggatgattgactcttagttttgatggttttccaccagatct |
158 |
Q |
| |
|
|| |||||| ||||| | |||||||||||| | |||| |||||| |
|
|
| T |
32576432 |
agtattggatgactgactgtgagttttgatggtctcccactagatct |
32576478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 2288 - 2080
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
2288 |
taggattacatcagattcatcttaggaattaaccacaaaagaattagttactcatagctaaagtataagttaactaacataagagaaaggattcatacat |
2189 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttca |
212 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
2188 |
gtaaaggatgattgactcttagttttgatggtttcccaccagatccccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccctct |
2089 |
T |
|
| Q |
213 |
tctgaaaac |
221 |
Q |
| |
|
|| |||||| |
|
|
| T |
2088 |
tcagaaaac |
2080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 208
Target Start/End: Original strand, 7641 - 7836
Alignment:
| Q |
13 |
taggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacat |
112 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7641 |
taggattacatcagattcatctcaggaattaaccacaaaagaattagttactcataactaaagtataagctaactaacataagaaaaaggattcatacat |
7740 |
T |
|
| Q |
113 |
gtgaaggatgattgactcttagttttgatggttttccaccagatctccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccc |
208 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
7741 |
gtagaggatgattgactcttagttttgatggtttcccaccggatctccaagtctctgctccaaaatatacctttaggtctcaaaatttgtgaaccc |
7836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 3254 - 3452
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||| |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3254 |
cataagattacataagattcatctcaggaat-aaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaagaaggattcatac |
3352 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| |||| ||||||||||| ||| |
|
|
| T |
3353 |
atgtaaaggatgattgactcttagttttgatggttgcccaccagatctccaaggtctctgctccaaaatatg-ctttaagtctttaaattcgtgaaacct |
3451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 32506500 - 32506650
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||| ||| || |||||||||||| |
|
|
| T |
32506500 |
cataggattacatcagattcatctcaagc-ttaatcacaaaagaattagttactcatagctaaagtacaagataactaacgtaaaaacaaggattcatac |
32506598 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa |
162 |
Q |
| |
|
||| |||||||||||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
32506599 |
gtgtattggatgattgactatgagttttgatggttgcccaccagatctccaa |
32506650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 259
Target Start/End: Original strand, 16190828 - 16191069
Alignment:
| Q |
16 |
gattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatacatgtg |
115 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||| |||||||||| |||||||||||| | | |||||||||||| || |||||||||||||||| |
|
|
| T |
16190828 |
gattacatcagattcatct-aagactcaaccacaaatagattagttacttatagctaaagtaaacgataactaacataaaaacaaggattcatacatgta |
16190926 |
T |
|
| Q |
116 |
aaggatgattgactcttagttttgatggttttccaccagatct-ccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaacccttcatc |
214 |
Q |
| |
|
|||||||||||| | | ||||||||||| ||||||||||| | ||| ||| |||||||||||||| ||| |||| ||| |||||||| ||| || |
|
|
| T |
16190927 |
ttggatgattgactatgaattttgatggttgcccaccagatctgcaaagcctccgctccaaaatatgctttt--ctctctaaaatcgtgaacacttactc |
16191024 |
T |
|
| Q |
215 |
tgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
|||||| | ||| ||||||||||| |||||||||||||||| |
|
|
| T |
16191025 |
tgaaaatggacttttctatttataagcctgtcaaaatcggccacc |
16191069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 259
Target Start/End: Complemental strand, 10759720 - 10759474
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |||| ||| ||||| |||||| | ||||||||||| |
|
|
| T |
10759720 |
cataggattacatcagattcatctcaagc-ttaaccataaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatat |
10759622 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatctccaa-gtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| |||| ||| | ||| |||||||| |||| |||| |||| ||| ||||||||||| |
|
|
| T |
10759621 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctccaaa-tatgtcttttc-tctctaaaatcgtgaaccct |
10759524 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | |||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
10759523 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacc |
10759474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 259
Target Start/End: Complemental strand, 13495586 - 13495339
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||| ||| |||| |||||| || |||||||||||| |
|
|
| T |
13495586 |
cataggattacatcatatttatctcaagt-ttaaccacaaagagattagttactcataactaaagtacaagacaactcacataaaaacaaggattcatac |
13495488 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct-ccaagtctctgctccaaaatatgcctttaggtctca-aaattcgtgaaccc |
208 |
Q |
| |
|
|||| |||| ||||||| | |||| || |||| | |||||| |||| | ||| | | ||||| |||||||||||| ||||| ||| |||||||||| |
|
|
| T |
13495487 |
atgtattggataattgactatgagttgtgttggtctcccaccaaatctacaaagcccccgctcc-aaatatgccttt-tctctcataaaatcgtgaaccc |
13495390 |
T |
|
| Q |
209 |
ttcatctgaaaac-gcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
||| | ||||||| | || ||| ||||||||||| |||||||||||||||| |
|
|
| T |
13495389 |
ttcctttgaaaacagact-tttctatttataagcctgtcaaaatcggccacc |
13495339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 27282754 - 27282842
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaa |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
27282754 |
cataggattatatcagattcatctcagga-ttaaccacaaagagattagttactcatagctaaagtacaagataactcacataaaaaaaa |
27282842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 1936226 - 1936128
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||| |||||||| |||||||||| ||| | ||||||||| ||||||||||||||||||||||| ||| |||||| |||| || |||||||||||| |
|
|
| T |
1936226 |
cataagattacatgagattcatct-aagtctcaaccacaaagagattagttactcatagctaaagtacaagataactaccatagaaacaaggattcatac |
1936128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 259
Target Start/End: Complemental strand, 13492861 - 13492615
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||| |||||||||| ||| |||||||| ||||||||||| |||| ||||||||| ||||||| ||| |||| |||||| || |||||||||||| |
|
|
| T |
13492861 |
cataagattacatcaaatttatctcaagt-ttaaccacaaagagattaattactcataaataaagtacaagaaaactcacataaaaacaaggattcatac |
13492763 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatct-ccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| || |||| | |||||| |||| | ||| | | ||||| ||||||| |||| |||| ||| ||||||||||| |
|
|
| T |
13492762 |
atgtattggataattgactatgagttgtgttggtctcccaccaaatctacaaagcccccgctcc-aaatatg-ctttttctctctaaaatcgtgaaccct |
13492665 |
T |
|
| Q |
210 |
tcatctgaaaac-gcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
|| | ||||||| | || ||| ||||||||||| |||||||||||||||| |
|
|
| T |
13492664 |
tcctttgaaaacagact-tttctatttataagcttgtcaaaatcggccacc |
13492615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0665 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0665
Description:
Target: scaffold0665; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 259
Target Start/End: Original strand, 291 - 537
Alignment:
| Q |
11 |
cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcatac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| |||| ||| ||||| |||||| | |||||||||||| |
|
|
| T |
291 |
cataggattacatcagattcatctcaagc-ttaaccatgaagagattagttactcataactacagtacaagataactcacataaaatcaaggattcatac |
389 |
T |
|
| Q |
111 |
atgtgaaggatgattgactcttagttttgatggttttccaccagatc-tccaagtctctgctccaaaatatgcctttaggtctcaaaattcgtgaaccct |
209 |
Q |
| |
|
|||| |||| ||||||| | |||| ||||||| | |||||| ||| || ||| ||| ||||| |||||||||||| |||| ||| ||||||||||| |
|
|
| T |
390 |
atgtattggataattgactatgagttgtgatggtctcccaccaaatcttcaaagcctccgctcc-aaatatgccttt-tctctctaaaatcgtgaaccct |
487 |
T |
|
| Q |
210 |
tcatctgaaaacgcctatttatatttataagcaggtcaaaatcggccacc |
259 |
Q |
| |
|
| | |||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
488 |
ccctttgaaaacggacttttctatttataagcctgtcaaaatcggccacc |
537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 12575947 - 12576048
Alignment:
| Q |
12 |
ataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataagctaactaacataagaaaaaggattcataca |
111 |
Q |
| |
|
||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| ||||||||| ||| |||||||||||| || || |||||||||| |
|
|
| T |
12575947 |
ataggattacatcagattcatct-aagtctcaaccacaaagagattagttactcatcgctaaagtacaagataactaacataaaaacaatgattcataca |
12576045 |
T |
|
| Q |
112 |
tgt |
114 |
Q |
| |
|
||| |
|
|
| T |
12576046 |
tgt |
12576048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 12578282 - 12578370
Alignment:
| Q |
122 |
gattgactcttagttttgatggttttccaccagatctccaagtct-ctgctccaaaatatgcctttaggtctcaaaattcgtgaaccctt |
210 |
Q |
| |
|
|||||||| | ||||||||||||| ||| ||||||| ||| || || |||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
12578282 |
gattgactatgagttttgatggttgcccatcagatctgcaaagcttctactccaaaacatgcctt-aggtctcaaaattcgtgaaccctt |
12578370 |
T |
|
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