View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2456_low_5 (Length: 411)
Name: NF2456_low_5
Description: NF2456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2456_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 48 - 306
Target Start/End: Complemental strand, 42943134 - 42942882
Alignment:
| Q |
48 |
ttaacttgtatgttcccttgggaataannnnnnnnacttgaacttgttgatgcacatgcttctttccaagtagcaattagagcctaagaaatgaaacaca |
147 |
Q |
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| T |
42943134 |
ttaacttgtatgttcccttgggaatcaaaatttt-acttgaacttgttgatgcacatgcttctttccaagtagcaattagagcctaagaaatgaaacaca |
42943036 |
T |
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| Q |
148 |
caatcttatgaagtgaaaggaaatgagagaataaccaaaattcgaaaaacaattgttacttgtgttacaagataatgtnnnnnnnnnntaaattcatgtt |
247 |
Q |
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| T |
42943035 |
caatcttatgaagtgaaaggaaatgagagaataaccaaaattcgaaaaacaattg----ttgtgttacaagataatgt-aaaaataaataaaatcatgtt |
42942941 |
T |
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| Q |
248 |
taagttttttaattttagtgtatactctcatcacctcggttatttctccctcagatatt |
306 |
Q |
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| T |
42942940 |
taagttttttaattttagtgtatactctcatcacctcggttatttctcccacagatatt |
42942882 |
T |
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