View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2459_high_15 (Length: 336)
Name: NF2459_high_15
Description: NF2459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2459_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 31339964 - 31340277
Alignment:
| Q |
16 |
gttcatattgatgattatctgctttcatatgatttagaataaataaattttcctattgaaatgtaataagtgatgtttgcatatgaatatatgtgatata |
115 |
Q |
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| T |
31339964 |
gttcatattgatgattatctgctttcatatgatttagaataaataaattttcctattgaaatgtaataagtgatgtttgcatatgaatatatgtgatata |
31340063 |
T |
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| Q |
116 |
agcatgttattattgttacatatgttggattatgtgtaaattgttgtatgttcatatgttaagttgacaatgcatgttcatgcatatcatatatagttac |
215 |
Q |
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| T |
31340064 |
agcatgttattattgttacatatgttggattatgtgtaaattgttgtatgttcatatgttaagttgacaatgcatgttcatgcatatcatatatagttac |
31340163 |
T |
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| Q |
216 |
atttttcttttgaagaaacatatcatagttacatggtgactatgatgggtgatgtggtgaggtttccggtgatagggacccatctaaattctacaaaatt |
315 |
Q |
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| T |
31340164 |
atttttcttttgaagaaacatatcatagttacatggtgactatgatgggtgatgtggtgaggtttccggtgatagggacccatctaaattctacaaaatt |
31340263 |
T |
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| Q |
316 |
ttattgagcctttg |
329 |
Q |
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| T |
31340264 |
ttattgagcctttg |
31340277 |
T |
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