View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2459_high_19 (Length: 298)
Name: NF2459_high_19
Description: NF2459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2459_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 285
Target Start/End: Complemental strand, 52086904 - 52086637
Alignment:
| Q |
18 |
ttatgttgaacagatgcgtcgccattttcagtattattggcactagagcctaagaatatggctccaacagcagctcgtactttgttcatcctctttcggt |
117 |
Q |
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| T |
52086904 |
ttatgttgaacagatgcgtcgccatttccagtattattggcactagagcctaagaatatggctccaacagcagcttgtactttgttcatcctctttcggt |
52086805 |
T |
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| Q |
118 |
gtcgaattcgtcgtagaacaacttctttgtcaagattcttacagttctcaattggttttaagaacaactgactagtaacgttgaacactgactcttcctc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52086804 |
gtcgaattcgtcgtagaacaacttctttgtcaagattcttacagttctcaattggttttaagaacaactgactagtaacgttgaacactgactcttcctc |
52086705 |
T |
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| Q |
218 |
ttcttcttcctcaactcccctgtttccaccaacttcaacttgtttgtcatttaacacaacacttcttc |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52086704 |
ttcttcttcctcaactcccctgtttccaccaacttcaacttgtttgtcatttaacacaacacttcttc |
52086637 |
T |
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