View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2459_low_37 (Length: 239)
Name: NF2459_low_37
Description: NF2459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2459_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 55176066 - 55176287
Alignment:
| Q |
1 |
catatgtgtctccaaagaatcccggtgtaagaaaatagttcagataacttgtttttaggcttgacatgcaaattttaggctcaaatagttctattcaact |
100 |
Q |
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| T |
55176066 |
catatgtgtctccaaagaatcccggtgtaagaaaatagttcagataacttgtttttaggcttgacatgcaaattttaggctcaaatagttctattcaact |
55176165 |
T |
|
| Q |
101 |
ataaatgcaatgattattttttgtttatctatgtaggagcatgttttatacatgaaccctggcgttcagaggaaaatattttatccaaaccaacaaaacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
55176166 |
ataaatgcaatgattattttttgtttatctatgtaggagcatgttttatacatgaaccctggcgttcggaggaaaatattttatccaaaccaacaaaacc |
55176265 |
T |
|
| Q |
201 |
cgcaactatgtcctgtccagat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
55176266 |
cgcaactatgtcctgtccagat |
55176287 |
T |
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