View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2461_high_6 (Length: 251)
Name: NF2461_high_6
Description: NF2461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2461_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 24515025 - 24515259
Alignment:
| Q |
4 |
tactgaatcaagtaaattcctccaccctttgatggaaagtacacatacctatggctgtaataattccactgaataaaacctgacggcgacgttttttcat |
103 |
Q |
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| T |
24515025 |
tactgaatcaagtaaattcctccaccctttgatggaaagtactcatacctatggctgtaataattccactgaataaaacctgacggcgacgttttttcat |
24515124 |
T |
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| Q |
104 |
cgtgttcttgttttcttccctaccatccttgatattttcaagcatgtcacaaaattatttatcacaattaatatctacattacataccaaataatagcaa |
203 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24515125 |
cgtgttcttgttttcttccctaccaaccttgatattttcaagcatgtcacaaaattatttatcacaattaatatctacattacataccaaataatagcaa |
24515224 |
T |
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| Q |
204 |
agaaaattaagttaattaaaacctgtttgctcttc |
238 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
24515225 |
agaaaattaagttaattaaaacctgtttgctcttc |
24515259 |
T |
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