View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2461_low_6 (Length: 284)
Name: NF2461_low_6
Description: NF2461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2461_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 24514562 - 24514808
Alignment:
| Q |
19 |
gtaaagccgagaaaacattacaaattttatctgaaactaaaaatgtgcaattaaaacaaagttaaactaaaatacaaagacatggcatcaaattttataa |
118 |
Q |
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| T |
24514562 |
gtaaagccgagaaaacattacaaattttatctgaaactaaaaatgtgcaattaaaacaaagttaaattaaaatacaaagacatggcatcaaattttataa |
24514661 |
T |
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| Q |
119 |
agatctatgattttccctcattgattataacaccaaataaaattacagtctcatgtctaaactgcttcggtttcaaaatttatacctcagggatattgtg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24514662 |
agatctatgattttccctcattgattataacaccaaataaaattacagtctcatgtctaaactgcttcggtttcaaaatttatacctcagggatattgtg |
24514761 |
T |
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| Q |
219 |
cagagcaattgccaatgcaaggttaagaccaacacgaagaccctatt |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24514762 |
cagagcaattgccaatgcaaggttaagaccaacacgaagaccctatt |
24514808 |
T |
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