View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2462_low_2 (Length: 686)

Name: NF2462_low_2
Description: NF2462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2462_low_2
NF2462_low_2
[»] chr4 (57 HSPs)
chr4 (343-686)||(33754674-33755016)
chr4 (88-186)||(7738818-7738916)
chr4 (88-185)||(4209523-4209620)
chr4 (90-185)||(3443387-3443482)
chr4 (88-185)||(3442344-3442441)
chr4 (88-185)||(4264298-4264395)
chr4 (88-185)||(55190566-55190663)
chr4 (88-185)||(5735435-5735532)
chr4 (88-185)||(20678588-20678685)
chr4 (88-185)||(25644523-25644620)
chr4 (88-185)||(26205704-26205801)
chr4 (88-185)||(28152155-28152252)
chr4 (88-185)||(47579450-47579547)
chr4 (88-180)||(5123162-5123254)
chr4 (88-186)||(6494754-6494852)
chr4 (88-186)||(37688032-37688130)
chr4 (88-185)||(3901139-3901236)
chr4 (88-185)||(5744083-5744180)
chr4 (88-185)||(18359973-18360070)
chr4 (88-185)||(36602858-36602955)
chr4 (88-185)||(39260132-39260229)
chr4 (88-185)||(46803796-46803893)
chr4 (88-182)||(19525717-19525811)
chr4 (88-178)||(49768609-49768699)
chr4 (88-185)||(28166438-28166535)
chr4 (88-185)||(46212350-46212447)
chr4 (94-186)||(39786356-39786448)
chr4 (88-185)||(6922940-6923037)
chr4 (88-185)||(19170539-19170636)
chr4 (88-185)||(45198340-45198437)
chr4 (88-163)||(23256099-23256174)
chr4 (88-186)||(19652255-19652353)
chr4 (91-185)||(21858919-21859013)
chr4 (91-185)||(21914782-21914876)
chr4 (88-186)||(23603646-23603744)
chr4 (88-185)||(1377196-1377292)
chr4 (88-179)||(50035700-50035791)
chr4 (88-185)||(47278277-47278374)
chr4 (88-173)||(50033184-50033269)
chr4 (88-180)||(19633854-19633946)
chr4 (184-226)||(33755459-33755501)
chr4 (88-185)||(40250741-40250838)
chr4 (126-178)||(42187007-42187059)
chr4 (301-344)||(33755342-33755385)
chr4 (88-168)||(51736971-51737051)
chr4 (91-185)||(48336648-48336742)
chr4 (88-178)||(53568515-53568604)
chr4 (88-127)||(37667740-37667779)
chr4 (86-124)||(2711480-2711518)
chr4 (88-186)||(18881323-18881421)
chr4 (88-165)||(19631472-19631550)
chr4 (89-163)||(39194077-39194151)
chr4 (88-185)||(29844290-29844387)
chr4 (88-168)||(10181151-10181231)
chr4 (115-151)||(19731200-19731236)
chr4 (88-132)||(39195543-39195587)
chr4 (146-186)||(50971650-50971690)
[»] chr7 (33 HSPs)
chr7 (88-185)||(31466358-31466455)
chr7 (88-185)||(19072933-19073030)
chr7 (88-186)||(23473968-23474066)
chr7 (88-186)||(42834291-42834389)
chr7 (88-185)||(34478008-34478105)
chr7 (88-185)||(48531486-48531583)
chr7 (88-186)||(47081144-47081242)
chr7 (88-185)||(4612087-4612184)
chr7 (88-185)||(36819860-36819957)
chr7 (88-185)||(36859208-36859305)
chr7 (88-185)||(47713502-47713599)
chr7 (88-186)||(47538087-47538185)
chr7 (88-185)||(28185411-28185508)
chr7 (88-186)||(36905690-36905788)
chr7 (88-185)||(10464115-10464212)
chr7 (88-185)||(37231563-37231660)
chr7 (88-185)||(37950945-37951042)
chr7 (88-170)||(21392182-21392264)
chr7 (88-186)||(42086637-42086735)
chr7 (88-185)||(2400449-2400546)
chr7 (88-185)||(32618942-32619039)
chr7 (88-156)||(44479750-44479818)
chr7 (88-185)||(31110789-31110886)
chr7 (88-185)||(35500747-35500844)
chr7 (88-159)||(36643326-36643397)
chr7 (88-151)||(46657797-46657860)
chr7 (88-151)||(18795174-18795237)
chr7 (89-154)||(2450851-2450916)
chr7 (88-185)||(7314312-7314409)
chr7 (126-187)||(24151579-24151640)
chr7 (91-168)||(31497726-31497803)
chr7 (88-130)||(42493572-42493614)
chr7 (88-185)||(40348571-40348668)
[»] chr6 (22 HSPs)
chr6 (88-185)||(18992067-18992164)
chr6 (88-185)||(20662059-20662156)
chr6 (88-185)||(25435575-25435672)
chr6 (88-185)||(8796213-8796310)
chr6 (89-185)||(30237332-30237428)
chr6 (88-185)||(11114729-11114826)
chr6 (88-185)||(16696016-16696113)
chr6 (88-185)||(24150905-24151002)
chr6 (88-185)||(31854982-31855079)
chr6 (88-185)||(22020440-22020537)
chr6 (88-185)||(25163328-25163425)
chr6 (88-185)||(643431-643528)
chr6 (88-185)||(7097873-7097970)
chr6 (88-185)||(13206953-13207050)
chr6 (88-185)||(33121706-33121803)
chr6 (93-185)||(19068771-19068863)
chr6 (88-185)||(9022840-9022937)
chr6 (145-185)||(29979024-29979064)
chr6 (88-138)||(12869385-12869435)
chr6 (88-138)||(16434590-16434640)
chr6 (88-133)||(29986210-29986255)
chr6 (153-185)||(33121542-33121574)
[»] chr5 (36 HSPs)
chr5 (88-185)||(5212922-5213019)
chr5 (88-186)||(39894945-39895043)
chr5 (88-185)||(32002014-32002111)
chr5 (88-185)||(32334638-32334735)
chr5 (88-185)||(42148471-42148568)
chr5 (88-185)||(5364588-5364685)
chr5 (88-185)||(14475230-14475327)
chr5 (88-185)||(35447997-35448094)
chr5 (88-185)||(40512680-40512777)
chr5 (88-185)||(43067385-43067482)
chr5 (88-182)||(39036574-39036668)
chr5 (88-185)||(4299833-4299930)
chr5 (88-185)||(22613709-22613806)
chr5 (88-185)||(23988741-23988838)
chr5 (88-185)||(35290450-35290547)
chr5 (88-185)||(970302-970399)
chr5 (88-185)||(4924838-4924935)
chr5 (88-185)||(16048249-16048346)
chr5 (88-185)||(29627432-29627529)
chr5 (88-185)||(37843575-37843672)
chr5 (92-185)||(38698131-38698224)
chr5 (88-185)||(43517060-43517157)
chr5 (88-180)||(37516309-37516401)
chr5 (88-185)||(39405928-39406025)
chr5 (87-170)||(25563663-25563746)
chr5 (88-191)||(41411151-41411254)
chr5 (88-160)||(19087641-19087713)
chr5 (88-191)||(1830819-1830922)
chr5 (88-168)||(30779763-30779843)
chr5 (88-149)||(2864118-2864179)
chr5 (101-185)||(16954795-16954881)
chr5 (88-147)||(19868724-19868783)
chr5 (88-127)||(31191144-31191183)
chr5 (88-143)||(35641811-35641866)
chr5 (88-168)||(30211708-30211788)
chr5 (88-124)||(30721652-30721688)
[»] chr2 (41 HSPs)
chr2 (89-185)||(7442891-7442987)
chr2 (88-185)||(40425249-40425346)
chr2 (88-183)||(44283281-44283376)
chr2 (88-185)||(18718403-18718500)
chr2 (88-185)||(23671540-23671637)
chr2 (88-185)||(42038687-42038784)
chr2 (88-179)||(36198957-36199048)
chr2 (88-178)||(30708892-30708982)
chr2 (88-185)||(9877083-9877180)
chr2 (88-185)||(14372241-14372338)
chr2 (88-185)||(27559739-27559836)
chr2 (88-185)||(34827076-34827173)
chr2 (88-185)||(41172757-41172854)
chr2 (88-186)||(14707534-14707631)
chr2 (88-185)||(3987232-3987329)
chr2 (88-185)||(20517582-20517679)
chr2 (88-185)||(41463517-41463614)
chr2 (88-185)||(44330548-44330645)
chr2 (88-185)||(4045233-4045330)
chr2 (88-185)||(32775903-32776000)
chr2 (88-168)||(40598293-40598373)
chr2 (88-185)||(13399105-13399202)
chr2 (88-185)||(39418020-39418117)
chr2 (89-179)||(4046016-4046104)
chr2 (88-186)||(24282959-24283057)
chr2 (88-185)||(43925074-43925171)
chr2 (88-180)||(1110456-1110548)
chr2 (88-151)||(4083371-4083434)
chr2 (91-185)||(30776206-30776294)
chr2 (88-185)||(42020203-42020301)
chr2 (88-185)||(38963683-38963780)
chr2 (88-184)||(38137533-38137628)
chr2 (92-151)||(16941845-16941904)
chr2 (92-151)||(17012510-17012569)
chr2 (88-138)||(6075172-6075222)
chr2 (88-142)||(43409449-43409503)
chr2 (88-185)||(332438-332535)
chr2 (88-138)||(27668005-27668055)
chr2 (153-185)||(1748974-1749006)
chr2 (153-185)||(20917729-20917761)
chr2 (153-185)||(44283508-44283540)
[»] scaffold0007 (1 HSPs)
scaffold0007 (88-185)||(15216-15313)
[»] chr8 (36 HSPs)
chr8 (88-185)||(8350880-8350977)
chr8 (92-185)||(2986493-2986586)
chr8 (88-185)||(3293101-3293198)
chr8 (88-185)||(23249016-23249113)
chr8 (88-185)||(30290088-30290185)
chr8 (88-185)||(30380694-30380791)
chr8 (88-185)||(43066290-43066387)
chr8 (88-185)||(45081976-45082073)
chr8 (88-186)||(1580767-1580862)
chr8 (88-185)||(13138132-13138229)
chr8 (88-185)||(29791106-29791203)
chr8 (88-177)||(39361289-39361378)
chr8 (89-185)||(14522545-14522640)
chr8 (88-185)||(2805476-2805573)
chr8 (88-185)||(6471009-6471106)
chr8 (88-185)||(18809440-18809537)
chr8 (88-185)||(38739821-38739918)
chr8 (88-186)||(12893692-12893790)
chr8 (88-182)||(40013815-40013909)
chr8 (88-185)||(37710063-37710160)
chr8 (88-183)||(38845771-38845866)
chr8 (88-185)||(31127805-31127902)
chr8 (88-168)||(45253910-45253990)
chr8 (88-175)||(6470624-6470711)
chr8 (88-181)||(10658141-10658234)
chr8 (88-179)||(44123834-44123925)
chr8 (88-163)||(23764471-23764546)
chr8 (88-162)||(886092-886166)
chr8 (88-149)||(14847373-14847434)
chr8 (88-142)||(25256497-25256551)
chr8 (88-185)||(13888594-13888691)
chr8 (90-169)||(11988727-11988806)
chr8 (88-151)||(42786062-42786125)
chr8 (88-185)||(9615523-9615620)
chr8 (153-185)||(38739657-38739689)
chr8 (153-185)||(40013651-40013683)
[»] chr1 (35 HSPs)
chr1 (88-185)||(25531942-25532039)
chr1 (90-185)||(45234849-45234944)
chr1 (88-185)||(30529050-30529147)
chr1 (88-185)||(50876528-50876625)
chr1 (88-185)||(52379153-52379250)
chr1 (88-185)||(37281256-37281353)
chr1 (88-185)||(38458894-38458991)
chr1 (88-185)||(42708664-42708761)
chr1 (88-185)||(48264811-48264908)
chr1 (88-186)||(39354263-39354361)
chr1 (88-186)||(50539424-50539522)
chr1 (88-185)||(1849865-1849962)
chr1 (88-185)||(3898571-3898668)
chr1 (88-185)||(16265197-16265294)
chr1 (88-185)||(16266326-16266423)
chr1 (88-185)||(26441798-26441895)
chr1 (88-185)||(29162007-29162104)
chr1 (88-185)||(43680234-43680331)
chr1 (88-191)||(4605163-4605266)
chr1 (88-183)||(48219644-48219739)
chr1 (88-185)||(32988349-32988446)
chr1 (88-185)||(23569674-23569771)
chr1 (88-185)||(24982515-24982612)
chr1 (88-185)||(49805252-49805349)
chr1 (88-175)||(16751463-16751550)
chr1 (88-168)||(47222379-47222459)
chr1 (88-185)||(41501607-41501704)
chr1 (88-168)||(14075897-14075977)
chr1 (88-151)||(3529340-3529403)
chr1 (88-190)||(50481440-50481542)
chr1 (88-145)||(31698623-31698680)
chr1 (88-184)||(21034530-21034626)
chr1 (88-148)||(38737869-38737929)
chr1 (88-151)||(31971421-31971484)
chr1 (88-124)||(43453136-43453172)
[»] chr3 (41 HSPs)
chr3 (88-182)||(47638219-47638313)
chr3 (88-185)||(7459820-7459917)
chr3 (88-185)||(37833064-37833161)
chr3 (88-185)||(38833827-38833924)
chr3 (88-176)||(38492215-38492303)
chr3 (90-185)||(34827419-34827514)
chr3 (88-178)||(1327476-1327566)
chr3 (88-190)||(52668481-52668583)
chr3 (88-185)||(8559005-8559102)
chr3 (88-185)||(10571144-10571241)
chr3 (88-185)||(18659216-18659313)
chr3 (88-185)||(21907160-21907257)
chr3 (88-185)||(29728098-29728195)
chr3 (88-185)||(54840128-54840225)
chr3 (88-185)||(51062554-51062651)
chr3 (88-185)||(53066534-53066631)
chr3 (88-185)||(46483714-46483809)
chr3 (88-185)||(17053028-17053125)
chr3 (88-185)||(32285176-32285273)
chr3 (88-185)||(32951136-32951233)
chr3 (88-185)||(48706846-48706943)
chr3 (88-170)||(43138015-43138097)
chr3 (88-185)||(45167463-45167560)
chr3 (88-185)||(4238494-4238591)
chr3 (88-181)||(35717859-35717952)
chr3 (88-181)||(36665182-36665275)
chr3 (88-185)||(54673942-54674039)
chr3 (88-175)||(25097197-25097284)
chr3 (88-185)||(49058020-49058117)
chr3 (88-178)||(48143927-48144017)
chr3 (110-185)||(3547420-3547495)
chr3 (135-185)||(10435330-10435380)
chr3 (88-168)||(5030006-5030086)
chr3 (135-185)||(27849147-27849197)
chr3 (88-186)||(48690217-48690315)
chr3 (88-123)||(27849115-27849150)
chr3 (88-163)||(35135740-35135815)
chr3 (88-143)||(39099005-39099060)
chr3 (88-154)||(21894348-21894414)
chr3 (88-185)||(34263666-34263763)
chr3 (88-168)||(15503187-15503267)
[»] scaffold0366 (2 HSPs)
scaffold0366 (88-177)||(14223-14312)
scaffold0366 (88-177)||(10557-10646)
[»] scaffold0459 (1 HSPs)
scaffold0459 (88-177)||(12916-13005)
[»] scaffold0092 (1 HSPs)
scaffold0092 (88-178)||(44115-44205)
[»] scaffold0051 (1 HSPs)
scaffold0051 (88-186)||(41216-41314)
[»] scaffold0027 (1 HSPs)
scaffold0027 (88-182)||(117485-117579)
[»] scaffold0340 (1 HSPs)
scaffold0340 (86-185)||(14500-14599)
[»] scaffold0604 (1 HSPs)
scaffold0604 (88-185)||(1278-1369)
[»] scaffold0111 (1 HSPs)
scaffold0111 (88-168)||(38249-38329)
[»] scaffold0204 (1 HSPs)
scaffold0204 (91-185)||(24170-24264)


Alignment Details
Target: chr4 (Bit Score: 157; Significance: 4e-83; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 343 - 686
Target Start/End: Complemental strand, 33755016 - 33754674
Alignment:
Q  343 taatataaaaacaataagatacctagatgttgtccataacataattacataacagtaaacggaagcacagaataaatcagcacgtgaagaattgagcaca 442  Q
    |||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33755016 taatataaaaacaataagatacctggatgttgtccataacataa--------cagtaaacggaagcacagaataaatcagcacgtgaagaattgagcaca 33754925  T
Q  443 ttaacaacgtgaaaggnnnnnnnnnnnnnnnnnnngtgcttgaaatacagttggcaatgttcactgtagacgtggcataatcgtggacattccgtggccc 542  Q
    ||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33754924 ttaacaacgtgaaaggaaacaaaacaaaac-----gtgcttgaaatacagttggcaatgttcactgtagacgtggcataatcgtggacattccgtggccc 33754830  T
Q  543 tacttggtaagaggatccattattcga--------------cagtatgggtttcactcactcacttcatccaaactttatagtactatacatcatgcgtt 628  Q
    |||||||||||||||||||||||||||                |  | ||||||||||||||||||||||||| |||||||      |||||||||||||    
T  33754829 tacttggtaagaggatccattattcgatgttgcttttgttcttggtttggtttcactcactcacttcatccaagctttata-----ctacatcatgcgtt 33754735  T
Q  629 ggtggggtt---ttatcatttattgccttcaaacaaacaactcactattctcctctttagc 686  Q
    |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33754734 ggtggggttttattatcatttattgccttcaaacaaacaactcactattctcctctttagc 33754674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 7738916 - 7738818
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  7738916 atttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagtag 7738818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 4209523 - 4209620
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  4209523 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 4209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 3443482 - 3443387
Alignment:
Q  90 ttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  3443482 ttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggagggagagagta 3443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 3442441 - 3442344
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  3442441 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 3442344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 4264298 - 4264395
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  4264298 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatttattaagggacggagggagta 4264395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 55190663 - 55190566
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||| ||||||||||||||    
T  55190663 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggttatctattaagggacggagggagta 55190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 5735435 - 5735532
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  5735435 atttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 5735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 20678685 - 20678588
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  20678685 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggaggaagta 20678588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 25644523 - 25644620
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  25644523 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgaaggacggagggagta 25644620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 26205801 - 26205704
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  26205801 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggacggagggagta 26205704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 28152155 - 28152252
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| ||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  28152155 atttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 28152252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 47579450 - 47579547
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  47579450 atttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 47579547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 5123254 - 5123162
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagg 180  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||    
T  5123254 atttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagg 5123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 6494754 - 6494852
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| || ||||||||||||||||||||| || ||||||||||||||||| |||| ||||||||||||| ||||||| |||||||    
T  6494754 atttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggacggaaggagtag 6494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 37688130 - 37688032
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||  ||||||| |||||| ||||||||||| | |||||||||||||    
T  37688130 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatacatattgtcaactagatcatttattaaggaacggagggagtag 37688032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 3901236 - 3901139
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  3901236 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagggacggaggaagta 3901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 5744180 - 5744083
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||| ||||||||||||||    
T  5744180 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagggacggagggagta 5744083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 18360070 - 18359973
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  18360070 atttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 18359973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 36602858 - 36602955
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  36602858 atttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 36602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 39260229 - 39260132
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  39260229 atttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggaggaagta 39260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 46803796 - 46803893
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| |||| |||||||||    
T  46803796 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacagagggagta 46803893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 19525811 - 19525717
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggga 182  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| || ||||| ||||||||||| |||||||||||||||| | |||||||||||    
T  19525811 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaatgatgtatattgtcaactaggtcatttattgagggacggaggga 19525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 49768609 - 49768699
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| |||||||    
T  49768609 atttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgga 49768699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 28166438 - 28166535
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||| ||| ||||    
T  28166438 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgaaggaagta 28166535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 46212447 - 46212350
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||| ||| ||||||||||    
T  46212447 atttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggatggagggagta 46212350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 39786448 - 39786356
Alignment:
Q  94 ctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||| ||||| |||||||||    
T  39786448 ctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatatatattgtcaactaagtcatctattaagggacgaagggagtag 39786356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 6923037 - 6922940
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||| | |||||||||||||||| | | ||||||||||||    
T  6923037 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattatcaactaggtcatttattgaggaacggagggagta 6922940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 19170636 - 19170539
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||| ||||| |||||||| |||||||| ||  |||||||||||| | ||||||||||||||    
T  19170636 atttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagggacggagggagta 19170539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 45198437 - 45198340
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||  |||| ||||||||| | || ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  45198437 atttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 45198340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 23256099 - 23256174
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcat 163  Q
    |||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  23256099 atttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaactagatcat 23256174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 19652353 - 19652255
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||| ||||| | ||||| ||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| |||| |||||| ||||||||| |||||    
T  19652353 atttttctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatctattaagggacggaggaagtag 19652255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 21859013 - 21858919
Alignment:
Q  91 tatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||| ||| ||||| |||||||||||||||||||||| |||| ||||||||  ||||||| |||||| ||||||||||| ||||||| ||||||    
T  21859013 tatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcatttattaagggacggatggagta 21858919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 21914876 - 21914782
Alignment:
Q  91 tatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||| ||| ||||| |||||||||||||||||||||| |||| ||||||||  ||||||| |||||| ||||||||||| ||||||| ||||||    
T  21914876 tatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcatttattaagggacggatggagta 21914782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 23603744 - 23603646
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||| ||||| | ||||| ||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||| |||| | | |||||||||||||    
T  23603744 atttttctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaggaacggagggagtag 23603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 1377196 - 1377292
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| ||||| ||||| || ||||||||| |||||||||||||| ||||||||||||||||| |||| | ||||||||||| |||| |||||||||    
T  1377196 atttatatttgtgaattagtataaaagtatg-tcaaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacagagggagta 1377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 50035700 - 50035791
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggag 179  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||| || |||| |||||||||||| || |||||||| |||| ||||||||||    
T  50035700 atttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctattgaaggacggag 50035791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 47278374 - 47278277
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||  ||||||| |||| ||||||||| | || ||||||||| |||||||||| || ||||| | |||||||||||||||||||    
T  47278374 atttatctttgtgaattgctagaaaaatatgatcaaagtatattaagtcaataatgcatattgttaaataagtcatctcttaaaggacggagggagta 47278277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 50033184 - 50033269
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaagg 173  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| || |||||||||||||| || || |||||||| |||| ||||    
T  50033184 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaaataggtcatctattgaagg 50033269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 19633946 - 19633854
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagg 180  Q
    |||| ||||| | ||||| ||||||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||| |||| | |||||||||    
T  19633946 atttttctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaataatatatattgtcaactaggtcatctattgagggacggagg 19633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 33755501 - 33755459
Alignment:
Q  184 tagataatgtactgtacttaataatcaacagaaattaaataat 226  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33755501 tagataatgtactgtacttaataatcaacagaaattaaataat 33755459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 40250741 - 40250838
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| |||||| |||| || |||| || ||||||| |||||||| ||||||||||||||||| ||||| ||||| |||||  ||||||| ||||||    
T  40250741 atttatatttgtatattagtataaaaataaggtcaaactatgtcaagtcaataatgtatattgtcaactatgtcatctattatgggacggaaggagta 40250838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 42187059 - 42187007
Alignment:
Q  126 tatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  42187059 tatgtcaagtcaataatgtatattgtcaactaggtcatctattaaaggacgga 42187007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 33755385 - 33755342
Alignment:
Q  301 tataaatattgattcaagttcaacacaactgtagacagaaccta 344  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  33755385 tataaatattgattcaagttcaacacaactgtacacagaaccta 33755342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 51737051 - 51736971
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||||||||||| ||||| ||||||| |||||||||| ||| | || ||||||||||||||||| || ||| |||| ||||    
T  51737051 atttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaaatagatcatctatt 51736971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 48336648 - 48336742
Alignment:
Q  91 tatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| |||| ||||||| || ||||||| ||||| || |||||| || | ||| |||| |||||||| ||||| | |||||||||||||    
T  48336648 tatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaatagtgcacatttttaaataggtcatctattataagacggagggagta 48336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 53568515 - 53568604
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||||||| ||||| ||||||| |||||||||| |||||  |||  |||||||||| ||| ||||  ||||| ||||||||||||||    
T  53568515 atttatctttgtgaattagtagaaaaatatggtcaaaatatgt-taatgtataatgtataatgtcaactgagtcatgtattaaaggacgga 53568604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 37667740 - 37667779
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagta 127  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  37667740 atttatctttgtatattaatagaaaaatatggtcaaagta 37667779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 2711480 - 2711518
Alignment:
Q  86 caatttatctttgtaaattaatagaaaagtatggtcaaa 124  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  2711480 caatttatctttgtatattaatagaaaaatatggtcaaa 2711518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 18881323 - 18881421
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    ||||||||||||| |||| ||||||| ||| |||||||||| | || |||||| |  | ||| | || |||||||| ||||  ||||||||||||||||    
T  18881323 atttatctttgtatattagtagaaaaatatagtcaaagtatattaagtcaatagttcacattttcaaataggtcatctattgtaggacggagggagtag 18881421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 19631472 - 19631550
Alignment:
Q  88 atttatctttgtaaattaatagaaaag-tatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcattt 165  Q
    |||||||||||| |||||  ||||||  |||||||||||||||| || || |||||||||||| | || ||||||||||    
T  19631472 atttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaaataggtcattt 19631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 39194077 - 39194151
Alignment:
Q  89 tttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcat 163  Q
    |||||||||||  |||| ||||||| ||  |||||||||||| || |||||| |||||||||| || ||||||||    
T  39194077 tttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaaataggtcat 39194151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 29844290 - 29844387
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| || |||||||||||| || ||| ||||||| | | |||||||||| ||||| | || ||| |||| ||||  | |||||||||||||    
T  29844290 atttatctttatatattaatagaaaaatacggttaaagtatcttagatcaataatgcatattttgaaatagatcatctattgtaagacggagggagta 29844387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 10181151 - 10181231
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    ||||||||||||| |||| ||||||| | |||||||| ||||| || |||||| || | ||||| || ||| |||||||||    
T  10181151 atttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattgtcaaatagatcatttatt 10181231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 19731236 - 19731200
Alignment:
Q  115 tatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||||||||||| || |||||||||||||||||    
T  19731236 tatggtcaaagtatgttaagtcaataatgtatattgt 19731200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 39195587 - 39195543
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtca 132  Q
    ||||||||||||| |||| || |||| ||||||||||||||||||    
T  39195587 atttatctttgtatattagtataaaaatatggtcaaagtatgtca 39195543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 50971650 - 50971690
Alignment:
Q  146 tattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||| ||||||||||| |||||| |||||||||||||||    
T  50971650 tattgtcaactaggtcatctattaagggacggagggagtag 50971690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 31466455 - 31466358
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  31466455 atttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 31466358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 19072933 - 19073030
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  19072933 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 19073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 23474066 - 23473968
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  23474066 atttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgtcaactaggtcatttattaagggacggatggagtag 23473968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 42834389 - 42834291
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||||||| |||||||||||||||    
T  42834389 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcgactaggtcatttattaagggacggagggagtag 42834291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 34478105 - 34478008
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  34478105 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 34478008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 48531486 - 48531583
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  48531486 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 48531583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 47081144 - 47081242
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    ||||||||||||  |||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  47081144 atttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtag 47081242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 4612184 - 4612087
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  4612184 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 4612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 36819860 - 36819957
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  36819860 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 36819957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 36859305 - 36859208
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  36859305 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaaatcaataatgcatattgtcaactaagtcatttattaagggacggagggagta 36859208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 47713599 - 47713502
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||| |||||||||    
T  47713599 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacagagggagta 47713502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 47538087 - 47538185
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||| |||||| || ||||||||||||    
T  47538087 atttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaactaggtcatctattaaggggcggagggagtag 47538185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 28185508 - 28185411
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||| |||||||| |||||    
T  28185508 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactatgtcatttattaagggacggagagagta 28185411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 36905690 - 36905788
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||| ||||| ||||||||||| |||| ||||||||||| | |||||||||||||||    
T  36905690 atttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagggacggagggagtag 36905788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 10464212 - 10464115
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  10464212 atttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 10464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 37231660 - 37231563
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| ||||||||| |||||| | ||||||||||||||    
T  37231660 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcgtttattgagggacggagggagta 37231563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 37951042 - 37950945
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || ||||||||| ||||| ||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  37951042 atttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 37950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 21392182 - 21392264
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaa 170  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||    
T  21392182 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgtcaactaggttatttattaa 21392264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 42086735 - 42086637
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||  ||||||| |||||  ||||||||||| |||||||||||||||    
T  42086735 atttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatacatattgtcaactaaatcatttattaagggacggagggagtag 42086637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 2400449 - 2400546
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| | || ||||||||| ||||||| |||||  ||||||||||| ||||||||| ||||    
T  2400449 atttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaataatgcatattgtcaactatatcatttattaagggacggaggaagta 2400546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32619039 - 32618942
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| ||||||||| | || ||||||||| ||||||| || ||||||||||||||| ||||||| ||||||    
T  32619039 atttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaataatgcatattgtcaattaggtcatttattaagggacggaaggagta 32618942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 44479818 - 44479750
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaact 156  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  44479818 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaact 44479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 31110789 - 31110886
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||| |||||||||| |||| ||||| ||||||||||| |||| | ||||||||| | ||||||||||||||    
T  31110789 atttatctttgtgaattagtataaaagtatagtcaaagtatttcaagtcaattatgtatattgtcaactggatcatttatttagggacggagggagta 31110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 35500844 - 35500747
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| ||||||| ||| |||||||||| | || ||||||||||||||||| |||||||||| ||||| | ||||||||||||||    
T  35500844 atttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgtcaactaggtcaattattgagggacggagggagta 35500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 36643326 - 36643397
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactagg 159  Q
    |||||||||||| ||||| | ||||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  36643326 atttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactagg 36643397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 46657797 - 46657860
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||| ||||    
T  46657797 atttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgt 46657860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 18795237 - 18795174
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| || |||||||| ||||||||    
T  18795237 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgt 18795174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 2450851 - 2450916
Alignment:
Q  89 tttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaa 154  Q
    ||||||||||| ||||||||||||| |||||| ||| ||||| |||| ||||| ||||||||||||    
T  2450851 tttatctttgtgaattaatagaaaaatatggttaaaatatgttaaattaataaagtatattgttaa 2450916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 7314312 - 7314409
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||| |||| ||||||| |||||||||||||||| |  |||||| || | ||| | || ||| |||| ||||  |||||||||||||||    
T  7314312 atttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatagtgcaaattctcaaatagatcatctattgtaggacggagggagta 7314409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 24151640 - 24151579
Alignment:
Q  126 tatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtaga 187  Q
    ||||| || ||||||||||||||||| || |||||||  |||||| ||||||||||||||||    
T  24151640 tatgttaagtcaataatgtatattgtcaaataggtcacctattaagggacggagggagtaga 24151579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 31497803 - 31497726
Alignment:
Q  91 tatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    ||||||||| ||||| ||||||| |||||||||| ||| | || ||||||||||||||||| || || ||||| ||||    
T  31497803 tatctttgtgaattagtagaaaaatatggtcaaattatattaagtcaataatgtatattgtcaaataagtcatgtatt 31497726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 42493614 - 42493572
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgt 130  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||    
T  42493614 atttatctttgtatattagtagaaaaatatggtcaaagtatgt 42493572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 40348571 - 40348668
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||| |||| ||||||| |||||||||| |||||||  |||| | || | ||||||||  ||||||| || ||| |||| || ||||||    
T  40348571 atttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaaaagtgcaaattgttaaacaggtcatctaataagggactgaaggagta 40348668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 6e-36; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 18992067 - 18992164
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  18992067 atttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagcgagta 18992164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 20662156 - 20662059
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  20662156 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 20662059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 25435575 - 25435672
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  25435575 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggacggagagagta 25435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 8796213 - 8796310
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || ||||||||||||||||||||| || ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  8796213 atttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 30237332 - 30237428
Alignment:
Q  89 tttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||| ||||||||    
T  30237332 tttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactatgtcatttattaagggacgaagggagta 30237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 11114729 - 11114826
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||||| |||| | |||||||||||  |||||||||||||    
T  11114729 atttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgtcaactggatcatttattaagagacggagggagta 11114826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 16696113 - 16696016
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||| | ||||||||||||||    
T  16696113 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtcatctattgagggacggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 24150905 - 24151002
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||  | ||||||||| ||||||||||||||    
T  24150905 atttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaaattatttattaagggacggagggagta 24151002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 31854982 - 31855079
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||| ||||||| ||||||||| ||||  |||||||||||| ||||||||||||||    
T  31854982 atttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataacgtatattgtcaactgagtcatttattaagggacggagggagta 31855079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 22020440 - 22020537
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| |||| |||||||||||| ||||||||||||||||| |||| ||||||||| ||| ||||||||||||||    
T  22020440 atttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagggacggagggagta 22020537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 25163328 - 25163425
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| ||||| |||||||||| | ||||||||||||||    
T  25163328 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactatgtcatttattgagggacggagggagta 25163425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 643528 - 643431
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| | ||| || |||||||||||||||||||||||| ||||| ||||||||||| ||||  |||||||||| | ||||||||||||||    
T  643528 atttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcatttatttagggacggagggagta 643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 7097970 - 7097873
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| || ||||||||||||||||||||| || |||||||| |||||||| ||||   ||||||||||| ||||||||||||||    
T  7097970 atttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaataatctatattgtcaactgaatcatttattaagggacggagggagta 7097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 13207050 - 13206953
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||| |||| || ||||||| ||||||||| || |||||||| |||| |  |||||||||||||    
T  13207050 atttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaaataggtcatctattgagtgacggagggagta 13206953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 33121706 - 33121803
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| ||||||| |||||||||||||  |||| |||||||| |||||||| ||  || ||||||||| | |||| |||||||||    
T  33121706 atttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaataatatatattgtcaaacagatcatttatttagggacagagggagta 33121803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 19068863 - 19068771
Alignment:
Q  93 tctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||||| || |||| || ||| |||| |||| | ||| |||| |||||    
T  19068863 tctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaaatagatcatctattgagggatggagagagta 19068771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 9022937 - 9022840
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| |||||| |||| ||||||| |||||||||||||||| |  |||| | || ||||| | ||  ||||||||||||  |||||||||||||||    
T  9022937 atttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcaggacggagggagta 9022840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 29979064 - 29979024
Alignment:
Q  145 atattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  29979064 atattgtcaactaggtcatttattaagggacggagggagta 29979024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 12869385 - 12869435
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaa 138  Q
    ||||||||||||| |||| ||||||| |||||||||| |||||||| ||||    
T  12869385 atttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaa 12869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 16434640 - 16434590
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaa 138  Q
    ||||||||||||| |||| | ||||| |||||||||||||||||| |||||    
T  16434640 atttatctttgtatattagtggaaaaatatggtcaaagtatgtcagatcaa 16434590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 29986255 - 29986210
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaa 133  Q
    |||||||||||| ||||| ||||||| |||||||||||||| ||||    
T  29986255 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaa 29986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 33121574 - 33121542
Alignment:
Q  153 aactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||||||||||    
T  33121574 aactaggtcatttattaagggacggagggagta 33121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 6e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 5213019 - 5212922
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  5213019 atttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagagacggagggagta 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 39894945 - 39895043
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  39894945 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagtag 39895043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32002111 - 32002014
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  32002111 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 32002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32334735 - 32334638
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  32334735 atttatctttgtcaattagtataaaagtgtggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 32334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 42148471 - 42148568
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  42148471 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 42148568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 5364588 - 5364685
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  5364588 atttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagagagta 5364685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 14475327 - 14475230
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  14475327 atttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaaggacggagggagta 14475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 35448094 - 35447997
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  35448094 atttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 35447997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 40512777 - 40512680
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||  |||||||||||| |||||||| |||||    
T  40512777 atttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgtcaactgagtcatttattaagggacggagagagta 40512680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 43067385 - 43067482
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  43067385 atttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactaggtcatttattgagggacggatggagta 43067482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 39036574 - 39036668
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggga 182  Q
    |||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  39036574 atttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagggacggaggga 39036668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 4299930 - 4299833
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  4299930 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 4299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 22613806 - 22613709
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  22613806 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 22613709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 23988741 - 23988838
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||| ||||||| ||||||    
T  23988741 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggacggatggagta 23988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 35290450 - 35290547
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  35290450 atttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagggacggaggaagta 35290547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 970302 - 970399
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || | ||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  970302 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaggtcatttattgagggacggagggagta 970399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 4924935 - 4924838
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||| ||||||||| ||||    
T  4924935 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaattaggtcatctattaagggacggaggaagta 4924838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 16048249 - 16048346
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  16048249 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggacggagta 16048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 29627432 - 29627529
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||| ||||| ||||||||||| |||| ||||||||||| | ||||||||||||||    
T  29627432 atttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagggacggagggagta 29627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 37843672 - 37843575
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||| |||| | ||||||||||||||    
T  37843672 atttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaagtaggtcatctattgagggacggagggagta 37843575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 38698131 - 38698224
Alignment:
Q  92 atctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||| || |||| |||||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  38698131 atctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggacggagggagta 38698224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 43517157 - 43517060
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| |||||| ||||||||| ||||    
T  43517157 atttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactaagtcatctattaagggacggaggaagta 43517060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 37516309 - 37516401
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagg 180  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||||||||||| |||||||| || |||||| |||||||||    
T  37516309 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgtcaactaggttatctattaagggacggagg 37516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 39405928 - 39406025
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||| ||| ||||||    
T  39405928 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggaaggatggagta 39406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 25563663 - 25563746
Alignment:
Q  87 aatttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaa 170  Q
    ||||||||||||| ||||| ||||||| |||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  25563663 aatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaataatgtacattgtcaactaggtcatctattaa 25563746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 191
Target Start/End: Complemental strand, 41411254 - 41411151
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtaga 187  Q
    |||||||||||| ||||| ||||||| ||||||||||||| || || |||||||| |||||||| || || |||||||||| | ||||||| |||||| |    
T  41411254 atttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagggacggatggagtata 41411155  T
Q  188 taat 191  Q
    ||||    
T  41411154 taat 41411151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 19087713 - 19087641
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggt 160  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | |||||||||||||||||||| || |||||    
T  19087713 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaaataggt 19087641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 1830819 - 1830922
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtaga 187  Q
    |||||||||| | ||||| ||||||| ||||||||||||| || || |||||||| |||||||| || || |||||||||| | ||||||| |||||| |    
T  1830819 atttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagggacggatggagtata 1830918  T
Q  188 taat 191  Q
    ||||    
T  1830919 taat 1830922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 30779843 - 30779763
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||||||||||||||||| ||||||| |||  ||||||| | | |||||||||||||||||||| ||||| ||||| ||||    
T  30779843 atttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgtcaactaagtcatctatt 30779763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 2864118 - 2864179
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatatt 149  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||| || |||||||||||||||    
T  2864118 atttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatatt 2864179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 16954795 - 16954881
Alignment:
Q  101 aattaatagaaaagtatggtcaaagtatgtcaaatcaata--atgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||| ||||||| ||||||||||| ||||||| |||| |  || |||||||| ||||| ||||| ||||||  |||||||||||||    
T  16954795 aattagtagaaaaatatggtcaaagcatgtcaagtcaaaaatatatatattgtcaactaagtcatctattaagagacggagggagta 16954881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 19868783 - 19868724
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtata 147  Q
    |||||||||||| ||||| ||||||| |||  ||||||||||| || |||||||||||||    
T  19868783 atttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaataatgtata 19868724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 31191144 - 31191183
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagta 127  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  31191144 atttatctttgtatattaatagaaaaatatggtcaaagta 31191183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 35641866 - 35641811
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatg 143  Q
    |||||||||| || |||| ||||||| |||||||||||||||||| ||||| ||||    
T  35641866 atttatctttatatattagtagaaaaatatggtcaaagtatgtcagatcaaaaatg 35641811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 30211708 - 30211788
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    ||||||||||||| |||| ||||||| ||||||||||||| || | ||||| | || | ||| ||||  ||||||||||||    
T  30211708 atttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacatttttaaacaggtcatttatt 30211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 30721652 - 30721688
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  30721652 atttatctttgtatattaatagaaaaatatggtcaaa 30721688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 7442987 - 7442891
Alignment:
Q  89 tttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  7442987 tttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatttattaagggacggagggagta 7442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 40425346 - 40425249
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||  ||||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  40425346 atttatctttgcgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 40425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 44283376 - 44283281
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggag 183  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  44283376 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggag 44283281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 18718403 - 18718500
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| ||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  18718403 atttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 18718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 23671540 - 23671637
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||||||||||  ||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  23671540 atttatctttgtgaattagtagaaaagtatggtcaaagtataccaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 23671637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 42038687 - 42038784
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||   ||||||||||| ||||||||||||||    
T  42038687 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgaatcatttattaagggacggagggagta 42038784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 36199048 - 36198957
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggag 179  Q
    |||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  36199048 atttatctttgtgaattagtagaaaagtacggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacggag 36198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 30708892 - 30708982
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||| |||||||    
T  30708892 atttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgtcaactaggtcatttattaagggacgga 30708982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 9877180 - 9877083
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||| ||||||||||||||||||| ||||||||||||||||| || |||||||| |||||| ||||||||||||||    
T  9877180 atttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaattaggtcatctattaagggacggagggagta 9877083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 14372241 - 14372338
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| ||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| || ||||||||||||||| ||||||||||||||    
T  14372241 atttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaattaggtcatttattaagggacggagggagta 14372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 27559739 - 27559836
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||| ||||||||||||||    
T  27559739 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagggacggagggagta 27559836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 34827076 - 34827173
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  34827076 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatatatattgtcaactgggtcatttattaagggacggagggagta 34827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 41172854 - 41172757
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||| ||||||||| ||||||| |||||| ||||||||||| |||||| |||||||    
T  41172854 atttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagggacggggggagta 41172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 14707631 - 14707534
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| |||||||||||| ||||||||  |||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  14707631 atttatctttgtgaattagtagaaaagtatg-tcaaagtacatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtag 14707534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 3987329 - 3987232
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| | ||||||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  3987329 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgtcaactaagtcatttattaagggacggagggagta 3987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 20517582 - 20517679
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||| | ||||||||||||    
T  20517582 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaaggaacggagggagta 20517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 41463614 - 41463517
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||| | |||| |||||||||||||||||||||||||||||| |||||| ||||||||| |  |||||| ||||||    
T  41463614 atttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaactagatcatttattgagagacggaaggagta 41463517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 44330548 - 44330645
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| |||| |||||||||||| ||||||||||||||||| |||| ||||||||| ||| ||||||||||||||    
T  44330548 atttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagggacggagggagta 44330645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 4045330 - 4045233
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| || |||| | |||||||| |||||||| |||| |||||||||||| || | ||||||||||||| ||||||||||||||    
T  4045330 atttatctttgtaaattagtataaaaatgtggtcaaaatatgtcaagtcaacaatgtatattgtcaaatgggtcatttattaagggacggagggagta 4045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32776000 - 32775903
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||| |||| || ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| | ||||||||||||||    
T  32776000 atttttcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatctattgagggacggagggagta 32775903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 40598293 - 40598373
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | |||| ||||||||||||||| ||||||||||||||||    
T  40598293 atttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgtcaactaggtcatttatt 40598373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 13399202 - 13399105
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||| |||||| |||| |||| || ||||||||||||||||| |||||| |||| |||| | |||||| |||||||    
T  13399202 atttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaactagatcatctattgagggacggggggagta 13399105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 39418117 - 39418020
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| | | ||||||||||||||| ||||||||||||||||| ||||| |||||  |||||  |||||||||||||    
T  39418117 atttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatccattaagagacggagggagta 39418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 4046016 - 4046104
Alignment:
Q  89 tttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggag 179  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| | |||| |||||||| ||||||||||| |||||| ||||||||    
T  4046016 tttatctttgtgaattagtagaaaagtatg--caaagtatgtcaaatgagtaatatatattgtcaactaggtcatctattaagggacggag 4046104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 24283057 - 24282959
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| || |||| ||| |||||| ||||||||||||||||| |||||||| |||||| |||| |||| | ||||||| |||||||    
T  24283057 atttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaactagatcatctattgagggacggaaggagtag 24282959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 43925171 - 43925074
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||| ||||||||||| || ||||||||||||||| | || |||||| | |||| | ||||||||||||||    
T  43925171 atttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaataggtcgtctattgagggacggagggagta 43925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 1110456 - 1110548
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagg 180  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||| ||||   || |||||||||| || | |||||||||    
T  1110456 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtttatttccaaataggtcatttgttgagggacggagg 1110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 4083371 - 4083434
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||||||| | ||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  4083371 atttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgt 4083434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 30776294 - 30776206
Alignment:
Q  91 tatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||  ||||||     |||||||||||||| ||||||||||||||    
T  30776294 tatctttgtaaattagtagaaaaatattgtcaaagtatgtcaagtcaataatg--tattgt----caggtcatttattaatggacggagggagta 30776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 42020301 - 42020203
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtc-aaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| ||||| ||||| ||||| | ||||||| ||||||||| |||||||||||||||||||| || ||||| || |||| | ||||||||||||||    
T  42020301 atttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaaataggttatctattgagggacggagggagta 42020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 38963683 - 38963780
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||| |||||||| ||||| |||||||| |||||||| ||  || |||| |||| | ||||||||||||||    
T  38963683 atttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaagcagatcatctatttagggacggagggagta 38963780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 38137628 - 38137533
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagt 184  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| || || ||||| ||||| || || |||||||| || | | |||||||||||||    
T  38137628 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtc-ataatatatatcgtcaaataggtcatctaatgagggacggagggagt 38137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 16941904 - 16941845
Alignment:
Q  92 atctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||| ||||| |||||||||||| ||||||||| |||| ||||||||| |||||||    
T  16941904 atctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgt 16941845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 17012569 - 17012510
Alignment:
Q  92 atctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||| ||||| |||||||||||| ||||||||| |||| ||||||||| |||||||    
T  17012569 atctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgt 17012510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 6075222 - 6075172
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaa 138  Q
    ||||||||||||| |||||||||||| ||||||||||||| || |||||||    
T  6075222 atttatctttgtatattaatagaaaaatatggtcaaagtaagttaaatcaa 6075172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 43409449 - 43409503
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataat 142  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||  ||||||||    
T  43409449 atttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaataat 43409503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 332438 - 332535
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||| |||  ||||||||||| || ||||||||||||||||| || ||| | || |||||| || | |||||||||    
T  332438 atttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaaatagattatctattaaggggcagagggagta 332535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 27668055 - 27668005
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaa 138  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||||| ||||    
T  27668055 atttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaa 27668005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 1749006 - 1748974
Alignment:
Q  153 aactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| ||||||||||||||||||||||    
T  1749006 aactaggtcacttattaaaggacggagggagta 1748974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 20917761 - 20917729
Alignment:
Q  153 aactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||||||||||    
T  20917761 aactaggtcatttattaagggacggagggagta 20917729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 44283508 - 44283540
Alignment:
Q  153 aactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||| ||||||||||||||||    
T  44283508 aactaggtcatttatttaaggacggagggagta 44283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 15313 - 15216
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  15313 atttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 15216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 8350977 - 8350880
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||    
T  8350977 atttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggatggagggagta 8350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 2986493 - 2986586
Alignment:
Q  92 atctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  2986493 atctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactaagtcatttattaagggacggagggagta 2986586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 3293198 - 3293101
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  3293198 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 3293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 23249016 - 23249113
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  23249016 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 23249113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 30290088 - 30290185
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  30290088 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 30290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 30380694 - 30380791
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||| ||||||||||||||    
T  30380694 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 30380791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 43066290 - 43066387
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  43066290 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcgactaggtcatttattaagggacggagggagta 43066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 45081976 - 45082073
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  45081976 atttatctttgtgaattagtagaaaagtatggtcgaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 45082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 1580862 - 1580767
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||| | |||||||||||||    
T  1580862 atttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaataatgtatattgt---ctaggtcatttattaaggaacggagggagtag 1580767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 13138229 - 13138132
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  13138229 atttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatattatcaactaggtcatctattaaaggacggagggagta 13138132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 29791106 - 29791203
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||| ||||||||    
T  29791106 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgtagggagta 29791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 39361289 - 39361378
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgg 177  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  39361289 atttatctttgtgaattaatagaaaagtatgatcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacgg 39361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 14522545 - 14522640
Alignment:
Q  89 tttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  14522545 tttatctttgtaa-ttagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 14522640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 2805573 - 2805476
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||| ||||||| ||||| |||||||||||||||||||||| |||| ||||| ||| ||||||| |||||||||||||||||| ||||||||||||||    
T  2805573 atttttctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaatgatgcatattgtcaactaggtcatttattaagggacggagggagta 2805476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 6471009 - 6471106
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||| |||||||||    
T  6471009 atttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacagagggagta 6471106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 18809440 - 18809537
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  18809440 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 18809537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 38739821 - 38739918
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||  ||||||||||||||    
T  38739821 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaaatcaataatatatattgtcaactgggtcatttattaccggacggagggagta 38739918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 12893692 - 12893790
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    ||||||||||||||||| |||||||| |||||||||||||||| || ||||||||| ||||||| || ||||||||||| | | |||||||||||||||    
T  12893692 atttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaaataggtcatttactgagggacggagggagtag 12893790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 40013815 - 40013909
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggga 182  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||| ||| |||||||||||    
T  40013815 atttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttactaagggacggaggga 40013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 37710063 - 37710160
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||| ||||||||||||||||| ||||  |||||||||||| ||||||| ||||||    
T  37710063 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggacggatggagta 37710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 88 - 183
Target Start/End: Original strand, 38845771 - 38845866
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggag 183  Q
    |||||||||||| ||||| || |||| | ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||| ||||||||||||    
T  38845771 atttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaagggacggagggag 38845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 31127902 - 31127805
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||| ||||||||| | || |||||||| |||||||| |||||||||||||||| | ||||||||||||||    
T  31127902 atttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataatatatattgtcaactaggtcatttattgagggacggagggagta 31127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 45253910 - 45253990
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  45253910 atttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctatt 45253990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 6470711 - 6470624
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggac 175  Q
    |||||||||| | ||||| ||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||| |||||| ||||    
T  6470711 atttatctttatgaattagtagaaaagtatcgtcaaaatatctcaaatcaataatgtatattgtcaactaggtcatctattaagggac 6470624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 10658141 - 10658234
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggg 181  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||| || ||||||||||||||||| || ||| |||| |||| ||||||||||||    
T  10658141 atttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaatagatcatctattgaaggacggaggg 10658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 44123834 - 44123925
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggag 179  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||| || |||| |||||||||||| || |||||||| |||| ||||||||||    
T  44123834 atttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctattgaaggacggag 44123925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 23764546 - 23764471
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcat 163  Q
    |||| ||||||| ||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||    
T  23764546 atttttctttgtgaattaatagaaaaatatgatcaaaatatatcaaattaataatgtatattgtcaactaggtcat 23764471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 886166 - 886092
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtca 162  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| || | ||||||||||||||| || |||||||    
T  886166 atttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaaataggtca 886092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 14847373 - 14847434
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatatt 149  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| || | |||||||||||||    
T  14847373 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagttaataatgtatatt 14847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 25256497 - 25256551
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataat 142  Q
    |||||||||||||||||| ||||||| |||| ||||||||||| || ||||||||    
T  25256497 atttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaataat 25256551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 13888594 - 13888691
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||| |||| ||||||| || ||||||||||||| |||||||||  | | ||| | || ||||| || ||||  |||||||||||||||    
T  13888594 atttatctttgtatattagtagaaaaatacggtcaaagtatgttaaatcaatagcgcacattttcaaataggttatctattgtaggacggagggagta 13888691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 11988806 - 11988727
Alignment:
Q  90 ttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatta 169  Q
    ||||||||||| |||| ||||||| || ||||||| ||||| || ||||||||||| ||| | || |||||||| |||||    
T  11988806 ttatctttgtatattagtagaaaactacggtcaaaatatgttaagtcaataatgtacattttcaaataggtcatctatta 11988727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 42786062 - 42786125
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    ||||||||||||| |||||||||||| |||||||||| | |||||| |||| | |||| |||||    
T  42786062 atttatctttgtatattaatagaaaaatatggtcaaaatgtgtcaagtcaaaactgtaaattgt 42786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 9615620 - 9615523
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||| |||| || |||| || ||||||||||||| | ||||||| |  ||||| | || |||||||| ||||  |||||||| ||||||    
T  9615620 atttatctttgtatattagtaaaaaaatacggtcaaagtatgttagatcaatagtacatattttcaaataggtcatatattgtaggacggatggagta 9615523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 38739689 - 38739657
Alignment:
Q  153 aactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||| ||||||||||||||||    
T  38739689 aactaggtcatttatttaaggacggagggagta 38739657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 40013683 - 40013651
Alignment:
Q  153 aactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| ||||||||||||||    
T  40013683 aactaggtcatttattaagggacggagggagta 40013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 25531942 - 25532039
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  25531942 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 25532039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 45234944 - 45234849
Alignment:
Q  90 ttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  45234944 ttatctttgtaaattaataaaaaagtatgatcaaagtatgtcaaattaataatgtatattgtcaactaggtcatttattaagagacggagggagta 45234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 30529147 - 30529050
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  30529147 atttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 30529050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 50876528 - 50876625
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  50876528 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 50876625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 52379153 - 52379250
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  52379153 atttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaaggacggagggagta 52379250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 37281256 - 37281353
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| |||||| ||||||||||||||    
T  37281256 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggagggagta 37281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 38458894 - 38458991
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||| ||||||||||    
T  38458894 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggatggagggagta 38458991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 42708664 - 42708761
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||| ||||||    
T  42708664 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggatggagta 42708761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 48264908 - 48264811
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  48264908 atttatctttctgaattagtagaaaagtatggtcaaagtatatcaactcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 48264811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 39354361 - 39354263
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||| ||| ||| |||||||||||||||||| |||||||||||||||    
T  39354361 atttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatgcatactgtcaactaggtcatttattaagggacggagggagtag 39354263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 50539424 - 50539522
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||| ||||||||||| ||||  |||||||||||| |||||||||||||||    
T  50539424 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcatttattaagggacggagggagtag 50539522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 1849865 - 1849962
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||| ||||||    
T  1849865 atttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggatggagta 1849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 3898668 - 3898571
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  3898668 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 3898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 16265197 - 16265294
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  16265197 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 16265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 16266326 - 16266423
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  16266326 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 16266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 26441798 - 26441895
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  26441798 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 26441895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 29162007 - 29162104
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| ||||||||| |||| ||||||||||||||||| |||||| || |||||||| ||||||||||||||    
T  29162007 atttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaactagatcgtttattaagggacggagggagta 29162104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 43680234 - 43680331
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  43680234 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 43680331  T

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Target: chr1; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 4605163 - 4605266
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtaga 187  Q
    |||||||||||| ||||||||| ||| ||||| |||||||||| || ||||||||||||||||| || |||||||| |||||| |||||||||||||| |    
T  4605163 atttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaaataggtcatctattaagggacggagggagtata 4605262  T
Q  188 taat 191  Q
    ||||    
T  4605263 taat 4605266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 48219739 - 48219644
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggag 183  Q
    |||||||||||| ||||| ||||||||||||||||| |||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||| ||||    
T  48219739 atttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggaaggag 48219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32988446 - 32988349
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| |||||||| |||||||| ||||||||||||||||| |||| | ||||||||||| ||||||||||||||    
T  32988446 atttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 32988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 23569771 - 23569674
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||| ||||| |||||||| |||||||| ||  |||||||||||| | ||||||||||||||    
T  23569771 atttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagggacggagggagta 23569674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 24982515 - 24982612
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || |||||||| |||||||| ||| |||||||||||| | ||||||||||||||    
T  24982515 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatatatattgtcaacaaggtcatttattgagggacggagggagta 24982612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 49805349 - 49805252
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||  ||| | ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||| | ||||||||||||    
T  49805349 atttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaaggaacggagggagta 49805252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 16751550 - 16751463
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggac 175  Q
    |||||||||||| ||||| || |||| |||||||||| ||||| || ||||||||||||||||| ||||||||||| |||| ||||||    
T  16751550 atttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtattgaaggac 16751463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 47222379 - 47222459
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||||||||||| ||||| || |||| |||||||||||||||| || ||||||||||||||| | || |||||||||||||    
T  47222379 atttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaaataggtcatttatt 47222459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 41501704 - 41501607
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| | ||| ||||| ||| || ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||| || |||  |||||||||    
T  41501704 atttatttgtgtgaattagtaggaatgtatgatcaaagtatgtcaattcaataatgtatattgtgaactaggtcatctatcaagggattgagggagta 41501607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 14075897 - 14075977
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||||| ||||| ||||| ||||||| |||||| ||| ||||| || ||||||||||||||||| ||||||||||| ||||    
T  14075897 atttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtatt 14075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 3529340 - 3529403
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||||| | ||||| ||||||| |||||||||||||||| || |||||||| ||||||||    
T  3529340 atttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgt 3529403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 50481440 - 50481542
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtaga 187  Q
    ||||| |||||| ||||| |||||||  || |||||||||||| |  ||||||||||||||||| || |||| ||| |||| | ||||| |||||||| |    
T  50481440 atttacctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaaataggccatctattgagggacgtagggagtata 50481539  T
Q  188 taa 190  Q
    |||    
T  50481540 taa 50481542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 31698680 - 31698623
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgta 145  Q
    ||||||||||||| ||||||| |||| |||| |||||||||||||||| || ||||||    
T  31698680 atttatctttgtatattaataaaaaaatatgatcaaagtatgtcaaattaaaaatgta 31698623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 21034626 - 21034530
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagt 184  Q
    |||||||||||| | ||| ||||||| |||  ||||||||||| || ||||||||||||||||| || ||| | || |||| | |||| ||||||||    
T  21034626 atttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaaatagattatctattgagggacagagggagt 21034530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 38737929 - 38737869
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatat 148  Q
    |||||||||||| ||||| ||||||| |||| | ||||||||| ||||||||||| |||||    
T  38737929 atttatctttgtgaattagtagaaaaatatgattaaagtatgttaaatcaataatatatat 38737869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 31971484 - 31971421
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 151  Q
    |||||||||||| ||||| ||||||| |||| ||||| ||||| |||| |||||| ||||||||    
T  31971484 atttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgt 31971421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 43453136 - 43453172
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  43453136 atttatctttgtatattaatagaaaaatatggtcaaa 43453172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 8e-32; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 47638219 - 47638313
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggga 182  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||    
T  47638219 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaattaggtcatctattaagggacggaggga 47638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 7459917 - 7459820
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  7459917 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 7459820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 37833064 - 37833161
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  37833064 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgttaactaggtcatttattaagggacggagggagta 37833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 38833827 - 38833924
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  38833827 atttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 38492215 - 38492303
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacg 176  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  38492215 atttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcatttattaagggacg 38492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 34827419 - 34827514
Alignment:
Q  90 ttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||| || ||||||||||| |||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  34827419 ttatctttgtaaattagtataaaagtatggtgaaagtatgtcaagtcaataatatatattgtcaactaggtcatttattaagggacggagggagta 34827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 1327476 - 1327566
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| |||||||    
T  1327476 atttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgga 1327566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 52668583 - 52668481
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtaga 187  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||| |    
T  52668583 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtgatttattaagggacggagggagtata 52668484  T
Q  188 taa 190  Q
    |||    
T  52668483 taa 52668481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 8559102 - 8559005
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||| ||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  8559102 atttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 8559005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 10571241 - 10571144
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||||||| |||| ||| ||||||||| ||||||||||||||    
T  10571241 atttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggttatttattaagggacggagggagta 10571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 18659216 - 18659313
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| | ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  18659216 atttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 18659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 21907160 - 21907257
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||| ||||||||||||||    
T  21907160 atttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggacggagggagta 21907257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 29728195 - 29728098
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  29728195 atttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaactagatcatttattaagggacggagggagta 29728098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 54840225 - 54840128
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  54840225 atttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 54840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 51062554 - 51062651
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||| | ||||  |||||||||||| ||||||||||||||    
T  51062554 atttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattatcaactgagtcatttattaagggacggagggagta 51062651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 53066534 - 53066631
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||| |||||||| |||||||| |||||| |||| |||||| ||||||||||||||    
T  53066534 atttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggagggagta 53066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 46483714 - 46483809
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||| |||||| |||| |||||||||    
T  46483714 atttatctttgtgaattagtagaaaagtatggtca--gtatgtcaaatcaataatgtatattgtcaactagatcatctattaagggacagagggagta 46483809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 17053028 - 17053125
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | |||||||||||||||||||| |||| ||||||||||| | |||||||| |||||    
T  17053028 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactgggtcatttattgagggacggagagagta 17053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32285273 - 32285176
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||| |||||| | ||||| ||||||    
T  32285273 atttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggccatctattaaggaacggatggagta 32285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 32951233 - 32951136
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||| | || ||||||||||||||||| |||||| ||||||||| | ||||||||||||||    
T  32951233 atttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcatttattgagggacggagggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 48706943 - 48706846
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| |||||||||||| ||||| |||||||| |||||||| |||||||| |||| | ||||||||||| ||||||||||||||    
T  48706943 atttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataatatatattgtcaactggatcatttattaagggacggagggagta 48706846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 43138015 - 43138097
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaa 170  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| ||||| ||||||||||||    
T  43138015 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaa 43138097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 45167463 - 45167560
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| || |||||| |||||||| |||||||| ||||||||||||||||| |||| | |||| |||||| ||||||||||||||    
T  45167463 atttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcatatattaagggacggagggagta 45167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 4238591 - 4238494
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| | ||||| |||||||||||||| | || | ||||||||||||||| ||||| |||||||||| | ||||||||||||||    
T  4238591 atttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaagtcatttattgagggacggagggagta 4238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 35717952 - 35717859
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggg 181  Q
    |||||||||||| ||||| ||||||| |||||||||| ||||| || ||||||||||||||||| || || ||||| |||| ||||||||||||    
T  35717952 atttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaaatacgtcatctattgaaggacggaggg 35717859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 36665182 - 36665275
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggg 181  Q
    |||||||||||| ||||| ||||||| ||| |||||||||||| || | ||||||||||||||| || |||||||| |||||| ||||||||||    
T  36665182 atttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaaataggtcatctattaagggacggaggg 36665275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 54673942 - 54674039
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||| |||||||| |||||||||||||| |||||||| ||  || ||||||||| | ||||||||||||||    
T  54673942 atttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataatatatattgtcaaacagatcatttatttagggacggagggagta 54674039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 25097284 - 25097197
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggac 175  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||||||| || || ||||| |||||| ||||    
T  25097284 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaatatgtatattgtcaattaagtcatctattaagggac 25097197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 49058020 - 49058117
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||| |||||||| ||||| |||||||| |||||||| ||  ||||||| |||| | ||||||||||||||    
T  49058020 atttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaaagaggtcatctatttagggacggagggagta 49058117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 48143927 - 48144017
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||||||||||||| ||||||| |||||||||| ||| | |  |||||||| |||||||| || ||||||||||||| | |||||||    
T  48143927 atttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaaataggtcatttattgagggacgga 48144017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 3547495 - 3547420
Alignment:
Q  110 aaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||| |||||||||||||||| || ||||||||||||||||| || |||||||| |||| | ||||| ||||||||    
T  3547495 aaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaataggtcatctattgagggacgaagggagta 3547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 10435330 - 10435380
Alignment:
Q  135 tcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  10435330 tcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 10435380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 5030086 - 5030006
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    ||||||||||||| |||| |||||||||| ||||||||||| | || ||||||||| | ||| |||| |||||||| ||||    
T  5030086 atttatctttgtatattagtagaaaagtacggtcaaagtatattaagtcaataatgcacatttttaaataggtcatctatt 5030006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 27849147 - 27849197
Alignment:
Q  135 tcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||| ||||||    
T  27849147 tcaataatgtatattgtcaactaggtcatctattaagggacggaaggagta 27849197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 48690217 - 48690315
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    ||||||||||||| |||| ||||||| ||| || ||| |||||||| |||||| || | |||||||| ||| |||| || || |||||||| |||||||    
T  48690217 atttatctttgtatattagtagaaaaatattgttaaaatatgtcaagtcaatagtgcaaattgttaaatagatcatctaatataggacggaaggagtag 48690315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 27849115 - 27849150
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaa 123  Q
    |||||||||||| |||||||||||||||||||||||    
T  27849115 atttatctttgttaattaatagaaaagtatggtcaa 27849150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 35135815 - 35135740
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcat 163  Q
    ||||||||||||| |||| |||||||  |||||||||||||||||  |||||  || ||||||| | |||||||||    
T  35135815 atttatctttgtatattagtagaaaaacatggtcaaagtatgtcaggtcaatggtgcatattgtcagctaggtcat 35135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 39099060 - 39099005
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatg 143  Q
    ||||||||||||| |||||||||||| ||| |||||||| | |||| |||||||||    
T  39099060 atttatctttgtatattaatagaaaaatatagtcaaagtttatcaattcaataatg 39099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 21894348 - 21894414
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaa 154  Q
    |||| |||||||| |||||||||||| |||| ||||||||| | | |||||||||||| ||| ||||    
T  21894348 atttgtctttgtatattaatagaaaaatatgatcaaagtatataatatcaataatgtacatttttaa 21894414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 34263666 - 34263763
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    ||||||||||||| |||| ||||||| ||||||||||||| || |  |||| | || | ||| ||||  ||||||||||||   ||||||||||||||    
T  34263666 atttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggagggagta 34263763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 15503187 - 15503267
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    |||| ||||| ||||||| ||||||| || | ||||||||| | || ||||||||||||||| | |||||| |||| ||||    
T  15503187 atttttctttttaaattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaactagatcatctatt 15503267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 14223 - 14312
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgg 177  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  14223 atttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgg 14312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 10557 - 10646
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgg 177  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  10557 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgg 10646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 12916 - 13005
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgg 177  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||    
T  12916 atttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgg 13005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 44205 - 44115
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacgga 178  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||| |||||||    
T  44205 atttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgga 44115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 41314 - 41216
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagtag 186  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||||||||| ||||| ||||||||||||  ||||||||||||||    
T  41314 atttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaataacgtatattgtcaactaagtcatttattaagagacggagggagtag 41216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 117485 - 117579
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggaggga 182  Q
    |||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||  ||||||| |||||||||||||||||| |||||||||||    
T  117485 atttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatacatattgtcaactaggtcatttattaagggacggaggga 117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 14500 - 14599
Alignment:
Q  86 caatttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||| ||||||| ||||| ||||||| ||| |||||||||| |||||||||||||||||||||| ||||||||||| ||||   ||||||| ||||||    
T  14500 caatttttctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaactaggtcatctattgtgggacggatggagta 14599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 1278 - 1369
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||||| ||||| ||||||| |||||||||||||       ||||||||||||||||| ||||||||||| |||| | ||||||||||||||    
T  1278 atttatctttgtgaattagtagaaaaatatggtcaaagtag------tcaataatgtatattgtcaactaggtcatctattgacggacggagggagta 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 38329 - 38249
Alignment:
Q  88 atttatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttatt 168  Q
    ||||| |||||| | ||| ||||||| |||||||||||||| | ||||||| |||||||||||| || |||||||| ||||    
T  38329 atttacctttgtgacttagtagaaaaatatggtcaaagtattttaaatcaaaaatgtatattgtcaaataggtcatctatt 38249  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 24170 - 24264
Alignment:
Q  91 tatctttgtaaattaatagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgttaactaggtcatttattaaaggacggagggagta 185  Q
    |||||||||| |||| ||||||| || ||||||| ||||| || |||||| || | ||| |||| |||||||| ||||| | |||||||||||||    
T  24170 tatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaatagtgcacatttttaaataggtcatctattataagacggagggagta 24264  T

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