View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2465_low_27 (Length: 251)
Name: NF2465_low_27
Description: NF2465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2465_low_27 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 33975841 - 33976097
Alignment:
| Q |
2 |
gcatctccaagaatatgacatgttaggattgagacttgttcaattttgtttttt-------aaattactattattttctctcaaattaacgcttacgttg |
94 |
Q |
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| T |
33975841 |
gcatatccaagaaaatgacatgttaggattgagacttgttcaatttttattttttttttaaaaattactattattttctctcaaattaacgcttacgttg |
33975940 |
T |
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| Q |
95 |
ttcatgtttgttcctaacattgttcaaaggttttattggcacaggttacatggtggttgcctgtgttggaaagaatgtgcatgaggagtaatgttcttgg |
194 |
Q |
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| T |
33975941 |
ttcatgtttgttcctaacattgttcaaaggttttattggcacaggttacatggtggttacctgtgttggaaagaatgtgcatgaggagtaatgttcttgg |
33976040 |
T |
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| Q |
195 |
tcattgaagatattctcgttaccaaagaattgacaagggttggtggattcatggtgt |
251 |
Q |
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| T |
33976041 |
tcattgaagatattctcgttaccaaagaattgacaagggttggtggattcatggtgt |
33976097 |
T |
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