View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2466R-Insertion-15 (Length: 388)
Name: NF2466R-Insertion-15
Description: NF2466R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2466R-Insertion-15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 8 - 388
Target Start/End: Complemental strand, 9496988 - 9496608
Alignment:
| Q |
8 |
aagataaagatgcacttgttgcagaacagctccgtaactcgggaggttgcaaaggtaaggtaacatccggctgtataattaaacacccacaatgaacacc |
107 |
Q |
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| T |
9496988 |
aagataaagatgcacttgttgcagaacagctccgtaactcgggaggttgcagaggtaaggtaacatccggctgtataattaaacacccacaatgaacacc |
9496889 |
T |
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| Q |
108 |
aacatatatgtatctagtaggacttaagcaacaatctttcttacatgttcccggtcacgtgctatctgtgacattgcaatcaggcggccctgcagcaagg |
207 |
Q |
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| T |
9496888 |
aacatatatgtatctagtaggacttaagcaacaatctttcttacatgttcctggtcacgtgctatctgtgacattgcaatcaggcggtcctgcagcaagg |
9496789 |
T |
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| Q |
208 |
cagcaggtaaaggttggatcagaggctgtactgcaatgtttttacctctccaagaaggccacacaacttcagcaccatccattcttaaacaaccatcctc |
307 |
Q |
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| T |
9496788 |
cagcaggtaaaggttgaatcagaggctgtactgcaatgtttttacctctccaagaaggccacacaacttcagcaccatccattcttaaacaaccatcctc |
9496689 |
T |
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| Q |
308 |
taaattacttccatcatgataccagcctctcattccccagtgtcttgggctggaactaccagacctaacagttggaaaacc |
388 |
Q |
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| T |
9496688 |
taaattacttccatcatgataccagcctctcattccccagtgtcttgggctggaactaccagacctaacagttggaaaacc |
9496608 |
T |
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