View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2467-Insertion-3 (Length: 707)

Name: NF2467-Insertion-3
Description: NF2467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2467-Insertion-3
NF2467-Insertion-3
[»] chr1 (103 HSPs)
chr1 (8-707)||(45376875-45377574)
chr1 (203-435)||(12851741-12851973)
chr1 (8-173)||(45391690-45391859)
chr1 (204-434)||(28751320-28751560)
chr1 (204-481)||(15646985-15647259)
chr1 (211-435)||(5317496-5317729)
chr1 (212-434)||(17919741-17919971)
chr1 (210-385)||(6377204-6377378)
chr1 (219-435)||(12002246-12002471)
chr1 (204-435)||(48259775-48260006)
chr1 (203-356)||(24040935-24041097)
chr1 (206-435)||(1428866-1429105)
chr1 (204-481)||(50349769-50350056)
chr1 (252-435)||(11650058-11650250)
chr1 (211-430)||(40719020-40719248)
chr1 (219-381)||(6332221-6332392)
chr1 (309-434)||(44582804-44582931)
chr1 (219-435)||(15698677-15698903)
chr1 (203-435)||(2459008-2459247)
chr1 (312-435)||(26252118-26252243)
chr1 (481-686)||(45391953-45392158)
chr1 (220-353)||(37437331-37437474)
chr1 (309-435)||(254937-255066)
chr1 (244-430)||(2245791-2245988)
chr1 (309-470)||(17806401-17806562)
chr1 (309-382)||(672307-672380)
chr1 (252-356)||(10690915-10691028)
chr1 (312-435)||(22664939-22665060)
chr1 (204-353)||(84430-84588)
chr1 (310-429)||(52403482-52403601)
chr1 (244-435)||(44583772-44583971)
chr1 (244-435)||(43929685-43929884)
chr1 (215-356)||(43105525-43105675)
chr1 (204-434)||(50158230-50158458)
chr1 (197-356)||(1430441-1430610)
chr1 (207-356)||(43755107-43755264)
chr1 (312-435)||(44024545-44024670)
chr1 (309-435)||(5854250-5854378)
chr1 (309-437)||(42650275-42650404)
chr1 (204-278)||(13408246-13408321)
chr1 (204-299)||(45749411-45749506)
chr1 (311-435)||(11134488-11134613)
chr1 (211-356)||(30006209-30006363)
chr1 (252-434)||(40060866-40061048)
chr1 (204-350)||(48319917-48320067)
chr1 (309-435)||(28200248-28200377)
chr1 (197-356)||(49894861-49895029)
chr1 (394-435)||(38132279-38132320)
chr1 (394-435)||(84605-84646)
chr1 (394-435)||(1430624-1430665)
chr1 (394-435)||(24041112-24041153)
chr1 (250-299)||(43738212-43738261)
chr1 (204-241)||(46554754-46554791)
chr1 (205-272)||(15823207-15823274)
chr1 (213-260)||(31699209-31699256)
chr1 (204-259)||(33694334-33694389)
chr1 (203-300)||(5463720-5463817)
chr1 (312-353)||(9552384-9552425)
chr1 (394-435)||(9552441-9552482)
chr1 (197-266)||(10842959-10843028)
chr1 (204-261)||(28200134-28200191)
chr1 (203-236)||(28200391-28200424)
chr1 (203-236)||(48025419-48025452)
chr1 (203-272)||(49468620-49468689)
chr1 (204-236)||(12002200-12002232)
chr1 (312-348)||(38132219-38132255)
chr1 (204-272)||(43358124-43358192)
chr1 (394-434)||(43755054-43755094)
chr1 (394-434)||(49894807-49894847)
chr1 (209-264)||(254828-254883)
chr1 (198-241)||(2458956-2458999)
chr1 (205-236)||(43358366-43358397)
chr1 (209-272)||(48009183-48009246)
chr1 (312-356)||(50591347-50591393)
chr1 (204-243)||(52125046-52125085)
chr1 (203-241)||(7375242-7375280)
chr1 (204-262)||(9915627-9915685)
chr1 (204-262)||(11134372-11134430)
chr1 (204-262)||(30686817-30686875)
chr1 (208-266)||(38530753-38530811)
chr1 (207-261)||(46286731-46286785)
chr1 (203-236)||(2610994-2611027)
chr1 (203-236)||(13408430-13408463)
chr1 (203-236)||(17919987-17920020)
chr1 (394-435)||(26582925-26582966)
chr1 (204-233)||(27721274-27721303)
chr1 (203-236)||(32807103-32807136)
chr1 (207-236)||(34047157-34047186)
chr1 (204-257)||(46046161-46046214)
chr1 (203-236)||(50094180-50094213)
chr1 (204-236)||(14593268-14593300)
chr1 (204-236)||(18794707-18794739)
chr1 (204-236)||(24884366-24884398)
chr1 (204-236)||(26352002-26352034)
chr1 (209-241)||(30292899-30292931)
chr1 (204-236)||(31491680-31491712)
chr1 (204-236)||(34032001-34032033)
chr1 (204-236)||(34047401-34047433)
chr1 (394-430)||(43105692-43105728)
chr1 (204-236)||(44024499-44024531)
chr1 (204-236)||(46045928-46045960)
chr1 (204-236)||(46286987-46287019)
chr1 (204-248)||(48025164-48025208)
[»] chr7 (83 HSPs)
chr7 (204-481)||(40298802-40299079)
chr7 (204-433)||(5723006-5723227)
chr7 (215-430)||(19920206-19920419)
chr7 (205-435)||(17869238-17869477)
chr7 (204-385)||(33845337-33845512)
chr7 (207-435)||(32275205-32275433)
chr7 (203-382)||(42259460-42259648)
chr7 (252-435)||(1103485-1103677)
chr7 (213-370)||(48838601-48838772)
chr7 (309-427)||(34002159-34002277)
chr7 (203-435)||(3680835-3681075)
chr7 (312-435)||(19906415-19906538)
chr7 (211-356)||(33056203-33056358)
chr7 (203-435)||(26963480-26963723)
chr7 (252-435)||(41905895-41906086)
chr7 (198-435)||(32345740-32345988)
chr7 (315-434)||(42044010-42044131)
chr7 (254-370)||(34733377-34733500)
chr7 (203-356)||(42121622-42121784)
chr7 (312-435)||(30514974-30515099)
chr7 (312-435)||(31416779-31416904)
chr7 (312-435)||(36447098-36447223)
chr7 (309-435)||(18733454-18733582)
chr7 (312-432)||(39117517-39117638)
chr7 (203-435)||(10684740-10684983)
chr7 (204-381)||(6521872-6522060)
chr7 (252-435)||(28044101-28044284)
chr7 (252-431)||(22627314-22627495)
chr7 (309-381)||(30833120-30833192)
chr7 (254-356)||(18886725-18886836)
chr7 (270-356)||(42010553-42010648)
chr7 (204-266)||(13405037-13405099)
chr7 (340-434)||(19288405-19288499)
chr7 (312-435)||(36836060-36836184)
chr7 (204-262)||(10599546-10599604)
chr7 (394-435)||(22597231-22597272)
chr7 (246-430)||(26527352-26527544)
chr7 (203-248)||(37815921-37815966)
chr7 (394-435)||(42121551-42121592)
chr7 (312-348)||(19277074-19277110)
chr7 (203-238)||(10599167-10599202)
chr7 (203-262)||(36915552-36915611)
chr7 (204-266)||(48684902-48684964)
chr7 (203-276)||(19906583-19906656)
chr7 (315-348)||(29001596-29001629)
chr7 (204-241)||(40339413-40339450)
chr7 (394-435)||(43813456-43813497)
chr7 (309-370)||(47272217-47272278)
chr7 (204-268)||(715784-715848)
chr7 (203-243)||(23935623-23935663)
chr7 (203-243)||(44453335-44453375)
chr7 (203-262)||(1742174-1742233)
chr7 (211-266)||(16564720-16564775)
chr7 (211-266)||(16600887-16600942)
chr7 (203-262)||(22298184-22298243)
chr7 (203-266)||(29530844-29530907)
chr7 (211-262)||(31418430-31418481)
chr7 (309-356)||(36447637-36447684)
chr7 (204-266)||(7795153-7795215)
chr7 (204-294)||(18733585-18733675)
chr7 (204-238)||(32501912-32501946)
chr7 (203-241)||(34012116-34012154)
chr7 (204-262)||(40339641-40339699)
chr7 (206-236)||(41137685-41137715)
chr7 (203-257)||(45933498-45933552)
chr7 (207-236)||(4268568-4268597)
chr7 (394-435)||(18886670-18886711)
chr7 (204-233)||(18886848-18886877)
chr7 (204-237)||(24133275-24133308)
chr7 (203-268)||(31929779-31929844)
chr7 (207-236)||(32097323-32097352)
chr7 (394-435)||(32873275-32873316)
chr7 (203-236)||(45948796-45948829)
chr7 (204-236)||(1741946-1741978)
chr7 (203-231)||(5722957-5722985)
chr7 (204-236)||(8603928-8603960)
chr7 (204-236)||(22297952-22297984)
chr7 (204-236)||(27947667-27947699)
chr7 (253-301)||(32873127-32873175)
chr7 (252-288)||(34002092-34002128)
chr7 (394-430)||(40805030-40805066)
chr7 (399-435)||(42753708-42753744)
chr7 (204-236)||(44057765-44057797)
[»] chr8 (75 HSPs)
chr8 (204-430)||(8382399-8382625)
chr8 (215-435)||(39970325-39970545)
chr8 (204-435)||(9022395-9022636)
chr8 (204-435)||(36915367-36915605)
chr8 (215-435)||(3095437-3095656)
chr8 (208-430)||(32661310-32661532)
chr8 (204-435)||(27109732-27109973)
chr8 (215-355)||(156309-156449)
chr8 (208-481)||(22601090-22601371)
chr8 (215-356)||(2812865-2813005)
chr8 (211-432)||(32326644-32326875)
chr8 (211-356)||(2803174-2803319)
chr8 (204-356)||(6839286-6839447)
chr8 (309-435)||(7612498-7612624)
chr8 (204-356)||(38328967-38329127)
chr8 (312-435)||(14541775-14541898)
chr8 (312-435)||(34461611-34461737)
chr8 (264-370)||(43938186-43938292)
chr8 (252-435)||(5588428-5588626)
chr8 (203-298)||(41414978-41415073)
chr8 (313-435)||(11257542-11257662)
chr8 (263-435)||(30788935-30789116)
chr8 (312-432)||(34168241-34168355)
chr8 (309-434)||(27416502-27416629)
chr8 (203-356)||(11335950-11336106)
chr8 (211-363)||(37185578-37185731)
chr8 (204-304)||(8106800-8106900)
chr8 (203-350)||(8471344-8471500)
chr8 (203-356)||(41790051-41790214)
chr8 (204-356)||(2067779-2067940)
chr8 (315-360)||(26439041-26439086)
chr8 (204-356)||(45187206-45187367)
chr8 (215-430)||(18673022-18673247)
chr8 (309-356)||(16209020-16209067)
chr8 (324-435)||(42946122-42946233)
chr8 (321-481)||(35052425-35052587)
chr8 (203-266)||(4760470-4760533)
chr8 (309-434)||(13108989-13109115)
chr8 (311-360)||(29931269-29931318)
chr8 (312-356)||(7129356-7129400)
chr8 (394-434)||(16208951-16208991)
chr8 (394-434)||(18666632-18666672)
chr8 (394-433)||(41790229-41790268)
chr8 (394-481)||(156197-156282)
chr8 (204-261)||(4530050-4530107)
chr8 (309-382)||(5044253-5044326)
chr8 (394-435)||(8471281-8471322)
chr8 (209-262)||(9880418-9880471)
chr8 (204-241)||(13368110-13368147)
chr8 (394-434)||(7129302-7129342)
chr8 (204-236)||(9880667-9880699)
chr8 (204-248)||(34168124-34168168)
chr8 (320-356)||(41414912-41414948)
chr8 (309-356)||(8107195-8107242)
chr8 (309-356)||(18666571-18666618)
chr8 (203-261)||(9304545-9304603)
chr8 (203-237)||(9304799-9304833)
chr8 (203-241)||(39463212-39463250)
chr8 (204-262)||(39463440-39463498)
chr8 (203-241)||(39698827-39698865)
chr8 (309-342)||(1774097-1774130)
chr8 (394-435)||(1774171-1774212)
chr8 (394-435)||(2803349-2803390)
chr8 (394-435)||(3203327-3203368)
chr8 (204-241)||(4760719-4760756)
chr8 (394-427)||(8107271-8107304)
chr8 (204-241)||(22699337-22699374)
chr8 (394-435)||(29931343-29931384)
chr8 (204-241)||(34168368-34168405)
chr8 (394-435)||(38329141-38329182)
chr8 (203-236)||(39765782-39765815)
chr8 (394-435)||(45187396-45187437)
chr8 (208-236)||(4989437-4989465)
chr8 (203-239)||(15749734-15749770)
chr8 (394-434)||(33870755-33870795)
[»] chr5 (84 HSPs)
chr5 (211-470)||(38982073-38982332)
chr5 (203-435)||(4371364-4371592)
chr5 (204-481)||(166561-166847)
chr5 (207-435)||(13066714-13066942)
chr5 (204-481)||(36660382-36660666)
chr5 (203-430)||(36783361-36783597)
chr5 (214-435)||(4751452-4751683)
chr5 (218-435)||(12992065-12992280)
chr5 (275-430)||(28640088-28640242)
chr5 (214-435)||(4742188-4742419)
chr5 (312-435)||(793633-793758)
chr5 (207-435)||(4833551-4833785)
chr5 (204-430)||(15400177-15400413)
chr5 (298-434)||(32690746-32690882)
chr5 (203-348)||(43257772-43257925)
chr5 (312-435)||(42329573-42329698)
chr5 (211-360)||(8960954-8961111)
chr5 (312-435)||(34171165-34171287)
chr5 (309-435)||(27810347-27810473)
chr5 (203-356)||(12167521-12167684)
chr5 (206-304)||(24436454-24436552)
chr5 (312-431)||(29653541-29653662)
chr5 (312-435)||(33585002-33585127)
chr5 (203-298)||(33693877-33693972)
chr5 (312-433)||(33822530-33822653)
chr5 (264-435)||(39059807-39059986)
chr5 (203-435)||(14979962-14980191)
chr5 (211-381)||(27652238-27652419)
chr5 (207-356)||(16886156-16886307)
chr5 (204-356)||(31889799-31889960)
chr5 (309-435)||(33741466-33741592)
chr5 (203-356)||(41566864-41567016)
chr5 (312-382)||(29044773-29044844)
chr5 (309-435)||(31557367-31557487)
chr5 (204-305)||(34919875-34919976)
chr5 (204-338)||(4967403-4967546)
chr5 (247-356)||(7388147-7388263)
chr5 (214-276)||(32690684-32690746)
chr5 (244-356)||(4011612-4011733)
chr5 (309-435)||(32963034-32963159)
chr5 (203-266)||(26660933-26660996)
chr5 (203-266)||(26932526-26932589)
chr5 (203-266)||(34445940-34446002)
chr5 (204-262)||(8336319-8336377)
chr5 (324-435)||(17674209-17674320)
chr5 (204-266)||(39566362-39566424)
chr5 (252-305)||(17674340-17674393)
chr5 (394-435)||(27658683-27658724)
chr5 (394-435)||(31889743-31889784)
chr5 (203-361)||(36296043-36296212)
chr5 (203-266)||(3305919-3305983)
chr5 (258-305)||(33741766-33741813)
chr5 (203-262)||(34972561-34972620)
chr5 (244-286)||(1513138-1513180)
chr5 (203-241)||(2729948-2729986)
chr5 (210-276)||(13761887-13761953)
chr5 (204-238)||(29653678-29653712)
chr5 (203-272)||(33822412-33822481)
chr5 (200-236)||(31557248-31557284)
chr5 (320-356)||(33693811-33693847)
chr5 (394-434)||(41845393-41845433)
chr5 (394-430)||(43257962-43257998)
chr5 (394-482)||(4011747-4011834)
chr5 (211-266)||(6519156-6519211)
chr5 (201-240)||(15167174-15167213)
chr5 (204-243)||(29653424-29653463)
chr5 (321-356)||(41845344-41845379)
chr5 (211-266)||(42329463-42329518)
chr5 (203-257)||(7145036-7145090)
chr5 (393-435)||(12167692-12167734)
chr5 (207-257)||(39335118-39335168)
chr5 (204-262)||(42103975-42104033)
chr5 (203-301)||(42661851-42661949)
chr5 (203-236)||(3306175-3306208)
chr5 (203-236)||(10344854-10344887)
chr5 (394-435)||(34919754-34919795)
chr5 (203-236)||(39804216-39804249)
chr5 (204-241)||(42104226-42104263)
chr5 (203-236)||(42978232-42978265)
chr5 (204-236)||(4631128-4631160)
chr5 (394-434)||(8961122-8961162)
chr5 (204-236)||(15566452-15566484)
chr5 (394-430)||(29051623-29051659)
chr5 (204-236)||(38369827-38369859)
[»] chr2 (74 HSPs)
chr2 (203-481)||(4536528-4536803)
chr2 (215-435)||(1360177-1360397)
chr2 (211-435)||(6591965-6592189)
chr2 (211-436)||(7743400-7743634)
chr2 (219-431)||(4840654-4840875)
chr2 (201-432)||(36360284-36360522)
chr2 (211-356)||(34225829-34225983)
chr2 (204-435)||(24775189-24775429)
chr2 (204-435)||(43388569-43388809)
chr2 (252-434)||(1298740-1298931)
chr2 (248-435)||(14511460-14511646)
chr2 (203-430)||(40987193-40987418)
chr2 (312-435)||(33093368-33093493)
chr2 (314-435)||(2459773-2459896)
chr2 (312-435)||(10580885-10581010)
chr2 (252-382)||(37106915-37107056)
chr2 (214-435)||(29795121-29795342)
chr2 (309-435)||(775910-776037)
chr2 (309-434)||(16316710-16316835)
chr2 (203-356)||(42969969-42970130)
chr2 (309-430)||(39866697-39866820)
chr2 (244-435)||(43344175-43344373)
chr2 (310-416)||(43460792-43460898)
chr2 (214-359)||(45147911-45148053)
chr2 (317-435)||(41984418-41984538)
chr2 (311-435)||(18374792-18374916)
chr2 (309-435)||(25332571-25332698)
chr2 (204-299)||(44228611-44228707)
chr2 (309-356)||(4766238-4766285)
chr2 (204-266)||(12342272-12342334)
chr2 (203-356)||(40410522-40410684)
chr2 (204-356)||(14378160-14378321)
chr2 (203-262)||(441142-441201)
chr2 (394-481)||(34225728-34225814)
chr2 (197-241)||(34546492-34546536)
chr2 (204-350)||(4566033-4566188)
chr2 (204-266)||(29396592-29396654)
chr2 (200-241)||(4132974-4133015)
chr2 (394-435)||(4766299-4766340)
chr2 (309-350)||(14698075-14698116)
chr2 (203-235)||(6247674-6247706)
chr2 (394-430)||(14378335-14378371)
chr2 (204-248)||(16807429-16807473)
chr2 (204-248)||(16846710-16846754)
chr2 (204-272)||(45081818-45081886)
chr2 (267-356)||(1381820-1381916)
chr2 (250-301)||(11171886-11171937)
chr2 (203-262)||(25383396-25383455)
chr2 (204-243)||(30855307-30855346)
chr2 (206-261)||(43480774-43480829)
chr2 (396-435)||(45372645-45372684)
chr2 (203-261)||(2459958-2460016)
chr2 (204-262)||(4133205-4133263)
chr2 (203-241)||(18579117-18579155)
chr2 (204-266)||(29808992-29809054)
chr2 (204-301)||(8774196-8774293)
chr2 (204-301)||(8789342-8789439)
chr2 (204-241)||(12342047-12342084)
chr2 (394-435)||(14698012-14698053)
chr2 (204-261)||(14698173-14698230)
chr2 (204-237)||(16807682-16807715)
chr2 (204-237)||(16846963-16846996)
chr2 (204-261)||(25332755-25332812)
chr2 (203-236)||(27964540-27964573)
chr2 (203-236)||(32228177-32228210)
chr2 (203-236)||(35799424-35799457)
chr2 (203-236)||(37724200-37724233)
chr2 (203-248)||(42743223-42743268)
chr2 (394-435)||(45148063-45148104)
chr2 (395-435)||(1381750-1381790)
chr2 (204-236)||(1422103-1422135)
chr2 (204-236)||(14286128-14286160)
chr2 (204-236)||(40987422-40987454)
chr2 (204-268)||(45423784-45423848)
[»] chr3 (106 HSPs)
chr3 (204-435)||(4391905-4392136)
chr3 (211-435)||(35099294-35099518)
chr3 (204-429)||(15514647-15514872)
chr3 (203-356)||(16240656-16240809)
chr3 (198-416)||(647498-647725)
chr3 (204-435)||(3000753-3000984)
chr3 (215-435)||(27483116-27483336)
chr3 (225-435)||(83297-83515)
chr3 (203-435)||(54933114-54933357)
chr3 (228-435)||(36310198-36310402)
chr3 (309-435)||(37225621-37225747)
chr3 (204-435)||(25061705-25061934)
chr3 (204-356)||(31290886-31291046)
chr3 (219-435)||(46362937-46363163)
chr3 (204-356)||(44648322-44648484)
chr3 (203-435)||(44854316-44854555)
chr3 (312-435)||(2988637-2988761)
chr3 (203-481)||(26965419-26965697)
chr3 (250-435)||(38457461-38457655)
chr3 (207-353)||(2662409-2662562)
chr3 (211-353)||(2567931-2568082)
chr3 (214-434)||(36541493-36541724)
chr3 (209-299)||(42857008-42857098)
chr3 (252-435)||(22730926-22731124)
chr3 (312-435)||(43169335-43169460)
chr3 (212-435)||(43580476-43580712)
chr3 (203-435)||(54261416-54261659)
chr3 (309-429)||(32303929-32304051)
chr3 (211-305)||(43599467-43599561)
chr3 (309-435)||(27027734-27027860)
chr3 (312-434)||(25722488-25722612)
chr3 (203-356)||(4476273-4476433)
chr3 (203-298)||(42740369-42740464)
chr3 (204-356)||(42791383-42791537)
chr3 (309-434)||(44645340-44645467)
chr3 (204-356)||(40048956-40049115)
chr3 (252-356)||(36771536-36771649)
chr3 (204-359)||(790149-790313)
chr3 (316-430)||(41287082-41287198)
chr3 (306-435)||(51381722-51381856)
chr3 (204-435)||(20512406-20512649)
chr3 (204-356)||(53716085-53716245)
chr3 (209-430)||(1340848-1341067)
chr3 (312-431)||(43687910-43688034)
chr3 (252-382)||(5244639-5244777)
chr3 (252-434)||(22414757-22414946)
chr3 (220-381)||(27039382-27039551)
chr3 (245-435)||(19552541-19552732)
chr3 (204-299)||(43736783-43736877)
chr3 (218-356)||(38165587-38165738)
chr3 (268-356)||(35239441-35239538)
chr3 (312-435)||(49470790-49470915)
chr3 (254-434)||(43600152-43600341)
chr3 (309-356)||(43599856-43599903)
chr3 (315-382)||(50420312-50420379)
chr3 (204-266)||(3152716-3152778)
chr3 (203-276)||(51398179-51398252)
chr3 (309-382)||(53560718-53560793)
chr3 (244-299)||(6084779-6084834)
chr3 (312-380)||(42007089-42007159)
chr3 (204-266)||(38277931-38277993)
chr3 (204-305)||(45095669-45095771)
chr3 (204-266)||(51482115-51482177)
chr3 (394-435)||(790097-790138)
chr3 (394-435)||(13485916-13485957)
chr3 (394-435)||(44648512-44648553)
chr3 (205-247)||(30186373-30186415)
chr3 (394-432)||(35239390-35239428)
chr3 (203-257)||(41287404-41287458)
chr3 (204-266)||(47895253-47895315)
chr3 (394-435)||(36771678-36771719)
chr3 (203-236)||(42886947-42886980)
chr3 (394-435)||(53716030-53716071)
chr3 (220-299)||(27027883-27027960)
chr3 (309-356)||(34059947-34059992)
chr3 (204-236)||(37225761-37225793)
chr3 (320-356)||(42740303-42740339)
chr3 (394-430)||(45095559-45095595)
chr3 (205-272)||(31853472-31853539)
chr3 (207-238)||(36844904-36844935)
chr3 (204-243)||(38363993-38364032)
chr3 (203-266)||(45213630-45213693)
chr3 (203-238)||(50646272-50646307)
chr3 (203-241)||(20512657-20512695)
chr3 (204-266)||(30431299-30431360)
chr3 (394-424)||(38165753-38165783)
chr3 (203-241)||(51397963-51398001)
chr3 (204-266)||(53560845-53560907)
chr3 (203-241)||(54261369-54261407)
chr3 (394-435)||(2568114-2568155)
chr3 (203-236)||(4759488-4759521)
chr3 (264-305)||(9167661-9167702)
chr3 (394-435)||(34059877-34059918)
chr3 (211-256)||(45566985-45567030)
chr3 (203-256)||(49470963-49471016)
chr3 (204-236)||(3152969-3153001)
chr3 (204-236)||(4392150-4392182)
chr3 (204-236)||(30186328-30186360)
chr3 (394-430)||(31291075-31291111)
chr3 (204-236)||(32492342-32492374)
chr3 (204-236)||(33194194-33194226)
chr3 (204-236)||(35557922-35557954)
chr3 (204-236)||(43169289-43169321)
chr3 (204-236)||(44648567-44648599)
chr3 (204-236)||(45213884-45213916)
chr3 (204-248)||(52222762-52222806)
[»] chr6 (41 HSPs)
chr6 (203-470)||(30627057-30627323)
chr6 (203-435)||(12828591-12828833)
chr6 (219-435)||(8052345-8052560)
chr6 (204-435)||(31275553-31275794)
chr6 (202-435)||(34439318-34439565)
chr6 (203-435)||(23936494-23936734)
chr6 (203-435)||(29915541-29915784)
chr6 (207-432)||(26669013-26669247)
chr6 (309-435)||(29927207-29927334)
chr6 (309-435)||(11785129-11785253)
chr6 (312-435)||(17345163-17345288)
chr6 (310-435)||(4123883-4124007)
chr6 (312-435)||(34576544-34576669)
chr6 (309-435)||(26189508-26189636)
chr6 (204-435)||(32258722-32258953)
chr6 (309-435)||(10494788-10494914)
chr6 (312-380)||(25932684-25932754)
chr6 (321-435)||(6140600-6140715)
chr6 (321-435)||(6143084-6143200)
chr6 (310-356)||(1924701-1924747)
chr6 (203-272)||(24163624-24163694)
chr6 (321-435)||(19689874-19689986)
chr6 (203-266)||(10520301-10520364)
chr6 (211-266)||(25932809-25932864)
chr6 (394-432)||(3015919-3015957)
chr6 (204-248)||(234222-234266)
chr6 (350-435)||(4132042-4132127)
chr6 (252-363)||(4131908-4132025)
chr6 (203-298)||(29927354-29927449)
chr6 (203-241)||(17246767-17246805)
chr6 (203-241)||(24163875-24163913)
chr6 (203-241)||(32429239-32429277)
chr6 (250-299)||(1924632-1924681)
chr6 (394-435)||(1924775-1924816)
chr6 (203-236)||(10540675-10540708)
chr6 (254-299)||(19689809-19689854)
chr6 (202-262)||(577244-577304)
chr6 (203-243)||(17345049-17345089)
chr6 (407-435)||(19416859-19416887)
chr6 (204-236)||(29399900-29399932)
chr6 (204-236)||(34519292-34519324)
[»] chr4 (99 HSPs)
chr4 (204-428)||(30492732-30492957)
chr4 (198-430)||(31987306-31987538)
chr4 (204-481)||(29840026-29840292)
chr4 (211-435)||(54091955-54092179)
chr4 (206-381)||(34096067-34096251)
chr4 (204-385)||(45049756-45049936)
chr4 (215-435)||(30022065-30022293)
chr4 (204-356)||(38692466-38692618)
chr4 (252-435)||(19849081-19849273)
chr4 (204-435)||(22212338-22212578)
chr4 (211-435)||(24259608-24259843)
chr4 (203-435)||(17499629-17499872)
chr4 (259-435)||(37445657-37445842)
chr4 (203-361)||(36805365-36805531)
chr4 (247-430)||(45520416-45520607)
chr4 (204-435)||(44855239-44855481)
chr4 (312-434)||(28116243-28116367)
chr4 (203-435)||(47321141-47321385)
chr4 (203-356)||(32140900-32141062)
chr4 (204-385)||(42672436-42672626)
chr4 (312-435)||(31941555-31941680)
chr4 (252-356)||(34360081-34360194)
chr4 (306-435)||(6510115-6510244)
chr4 (309-435)||(34124292-34124420)
chr4 (204-356)||(52732667-52732827)
chr4 (309-435)||(45889561-45889688)
chr4 (203-356)||(56556193-56556352)
chr4 (196-299)||(32140783-32140886)
chr4 (214-434)||(11835105-11835331)
chr4 (264-356)||(15501129-15501230)
chr4 (244-430)||(29289843-29290040)
chr4 (203-435)||(43421038-43421270)
chr4 (315-435)||(6462006-6462133)
chr4 (312-435)||(19282439-19282565)
chr4 (327-435)||(17317889-17317998)
chr4 (309-435)||(51434284-51434412)
chr4 (204-356)||(31817114-31817276)
chr4 (254-356)||(50072333-50072438)
chr4 (213-379)||(4408099-4408276)
chr4 (309-435)||(35928488-35928612)
chr4 (252-356)||(39671069-39671182)
chr4 (204-301)||(51737237-51737334)
chr4 (321-434)||(45903446-45903559)
chr4 (309-356)||(21045209-21045256)
chr4 (204-266)||(50623263-50623325)
chr4 (211-272)||(29519448-29519509)
chr4 (309-350)||(54233900-54233941)
chr4 (252-356)||(54512099-54512212)
chr4 (394-435)||(56556367-56556408)
chr4 (394-470)||(50072243-50072319)
chr4 (309-356)||(51930652-51930699)
chr4 (203-266)||(53814412-53814475)
chr4 (203-435)||(55126494-55126737)
chr4 (204-266)||(37654589-37654651)
chr4 (203-272)||(54042097-54042167)
chr4 (394-435)||(15501259-15501300)
chr4 (394-435)||(21045153-21045194)
chr4 (394-435)||(32141076-32141117)
chr4 (394-435)||(52732596-52732637)
chr4 (395-435)||(31817289-31817329)
chr4 (311-381)||(38761857-38761925)
chr4 (203-262)||(38991678-38991737)
chr4 (203-266)||(40345262-40345325)
chr4 (204-238)||(30780292-30780326)
chr4 (394-435)||(1868212-1868253)
chr4 (203-236)||(7905922-7905955)
chr4 (394-435)||(39671195-39671236)
chr4 (250-299)||(51906268-51906317)
chr4 (394-435)||(51930597-51930638)
chr4 (204-261)||(52847970-52848027)
chr4 (208-248)||(24941077-24941117)
chr4 (204-272)||(34316393-34316461)
chr4 (204-236)||(44572038-44572070)
chr4 (245-370)||(3093411-3093544)
chr4 (211-266)||(45889740-45889795)
chr4 (215-266)||(49089642-49089693)
chr4 (207-266)||(54233993-54234052)
chr4 (311-350)||(55548249-55548288)
chr4 (204-266)||(2493281-2493343)
chr4 (198-236)||(19451384-19451422)
chr4 (204-238)||(32141130-32141164)
chr4 (309-346)||(34534119-34534157)
chr4 (198-236)||(37624754-37624792)
chr4 (203-241)||(45520621-45520659)
chr4 (203-241)||(47817689-47817727)
chr4 (204-262)||(51434170-51434228)
chr4 (394-435)||(6232148-6232189)
chr4 (204-261)||(34124477-34124534)
chr4 (203-236)||(38510171-38510204)
chr4 (207-236)||(39982059-39982088)
chr4 (203-236)||(45043759-45043792)
chr4 (203-236)||(50621356-50621389)
chr4 (210-299)||(56422920-56423009)
chr4 (204-236)||(17499887-17499919)
chr4 (203-243)||(31941755-31941795)
chr4 (203-243)||(39985019-39985059)
chr4 (204-236)||(49089415-49089447)
chr4 (204-236)||(50203032-50203064)
chr4 (394-434)||(54233844-54233884)
[»] scaffold0189 (1 HSPs)
scaffold0189 (213-435)||(12989-13211)
[»] scaffold0072 (1 HSPs)
scaffold0072 (204-430)||(11994-12219)
[»] scaffold0007 (1 HSPs)
scaffold0007 (211-381)||(158154-158322)
[»] scaffold0119 (1 HSPs)
scaffold0119 (207-432)||(1546-1780)
[»] scaffold0003 (1 HSPs)
scaffold0003 (312-435)||(321726-321851)
[»] scaffold0047 (3 HSPs)
scaffold0047 (309-435)||(70479-70607)
scaffold0047 (202-241)||(70616-70655)
scaffold0047 (203-261)||(70364-70422)
[»] scaffold0060 (1 HSPs)
scaffold0060 (207-325)||(31663-31781)
[»] scaffold0886 (1 HSPs)
scaffold0886 (252-435)||(4068-4261)
[»] scaffold0238 (1 HSPs)
scaffold0238 (252-380)||(16000-16136)
[»] scaffold0580 (4 HSPs)
scaffold0580 (203-299)||(1719-1815)
scaffold0580 (203-299)||(9458-9554)
scaffold0580 (394-482)||(1594-1684)
scaffold0580 (394-482)||(9333-9423)
[»] scaffold0519 (1 HSPs)
scaffold0519 (315-382)||(7732-7799)
[»] scaffold0194 (1 HSPs)
scaffold0194 (321-435)||(8158-8274)
[»] scaffold0565 (1 HSPs)
scaffold0565 (203-262)||(9571-9630)
[»] scaffold0015 (2 HSPs)
scaffold0015 (203-272)||(20992-21061)
scaffold0015 (203-237)||(21247-21281)
[»] scaffold0332 (1 HSPs)
scaffold0332 (204-236)||(3733-3765)


Alignment Details
Target: chr1 (Bit Score: 570; Significance: 0; HSPs: 103)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 8 - 707
Target Start/End: Original strand, 45376875 - 45377574
Alignment:
Q  8 agattcaaactcaagattactgtataaggtggaagggagtcctaacatcccatacaagctcttttcgatagtttgcatgcttaacgaaattaaatatatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45376875 agattcaaactcaagattactgtataaggtggaagggagtcctaacatcccatacaagctcttttcgatagtttgcatgcttaacaaaattaaatatatt 45376974  T
Q  108 ccttaatttctattacatttatcacaaacactattcattttgtgaacccaccaaattgaaaaggacatatcgagaagataagaaagatcaatatgatact 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45376975 ccttaatttctattacattgatcacaaacactattcattttgtgaacccaccaaattgaaaaggacatatcgagaagataagaaagatcaatatgatact 45377074  T
Q  208 ccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaa 307  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||||||||| |||    
T  45377075 ccctccgtttcaaaatgattgtcgttttaaccaattacacacaaattaagaaatgaaatgaaatgatcattagacttatcatttttactaaattgctcaa 45377174  T
Q  308 taaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgg 407  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||    
T  45377175 taaaaagacaaacttaaagtttcattgaaaattgtgcgagagaaaagttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattgg 45377274  T
Q  408 aaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagtaccacctaattgactagacaattggtt 507  Q
    ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  45377275 aaatgtaaagtgacattcattttgaaattatatttttttgctaaagtgacactcattatgaaacgaagggagtaccacctaattgactagacatttggtt 45377374  T
Q  508 taggtctcttcaaggtcttgagtcatagcaatatttagatttgaccgagtaactgacttagatacatgaatcaaacacttatcttttgcaaatcaaacat 607  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45377375 taggtcttttcaaggtcttgagtcatagtaatatttagatttgaccgagtaactgactcagatacatgaatcaaacacttatcttttgcaaatcaaacat 45377474  T
Q  608 accataagctatgtcgtgataatcagaccatcaacttccataaatagtataacatatttggatgagcagttcattctatgactttatcttgacatcgtga 707  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  45377475 accataagctatgccgtgataatcagaccatcaacttccataaatagtagaacatacttggatgagcagttaattctatgactttatcttgacatcgtga 45377574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 12851973 - 12851741
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||||||||| ||||||| |||| ||||||||||| | |||||| |||||||| |||||||||||||  |||||| ||||| |||| ||    
T  12851973 atactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaaggaatgaaataaaataatcattaggtataacacttttaataaaatg 12851874  T
Q  303 cccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
    ||||| ||||||||||| ||||||||||||| |||||||| |||  ||||||||||||||| |||||||||||||||||||||        ||||||| |    
T  12851873 cccaagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttgagtatatattgagggtaaagttgggagaaaaaaattaaagttct 12851774  T
Q  403 attggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||||||||    
T  12851773 attggaaatgtaaagtgacattcattttgaaac 12851741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 45391690 - 45391859
Alignment:
Q  8 agattcaaactcaagattactgtataaggtggaagggagtcctaacatcccatacaagctcttttcgatagtttg----catgcttaacgaaattaaata 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |    ||||||||| |||||||||||    
T  45391690 agattcaaactcaagattactgtataagctggaagggagtcctaacatcccatacaagctctcttcgatagttagtttacatgcttaatgaaattaaata 45391789  T
Q  104 tattccttaatttctattacatttatcacaaacactattcattttgtgaacccaccaaattgaaaaggac 173  Q
    ||||||||||||||||||||||| ||| |||||||||| ||| ||||||  |||||||||||||||||||    
T  45391790 tattccttaatttctattacattgatcccaaacactatccatgttgtgataccaccaaattgaaaaggac 45391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 204 - 434
Target Start/End: Original strand, 28751320 - 28751560
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||| | |||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  28751320 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgc 28751419  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    ||         || |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||        |    
T  28751420 ccttactttataagaaaaggacaaacttaaagttacattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 28751519  T
Q  395 aaagttgtattggaaatgtaaagtgaca-ttcattttgaaa 434  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  28751520 aaagttgtattgaaaatgtaaagtgacatttcattttgaaa 28751560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 204 - 481
Target Start/End: Original strand, 15646985 - 15647259
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||| |||||||| |||| || |||||| ||||||||||||||| ||||||| |||||     
T  15646985 tactccctctgttttaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgtaaagaaatattcattagacataacacttttactgaattga 15647084  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgta 403  Q
    |||| |||||||||||  | |||||| |||||||||| ||  ||||||||||| |||||| |||| ||||||||||||||||         ||| |||||    
T  15647085 ccaagaaaaagacaaaact-aagttggattgaaaattatgcaagagaaaagttggagtatttattaagggtaaagttgggagaaaaaaa--aaatttgta 15647181  T
Q  404 ttggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||| |||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||||    
T  15647182 ttgaaaatgtaaagtgacattcattttgaaacaatttttttttgctaaagtgacactcattatgaaatggagggagta 15647259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 211 - 435
Target Start/End: Original strand, 5317496 - 5317729
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||||||||||||||||||||||  ||||   ||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||         
T  5317496 tccgttttaaaatgagtgtcgttttaggcaatagtacatagattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttat 5317595  T
Q  306 -----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagtt 400  Q
         || ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||| ||        |||||||    
T  5317596 tttataagaaaaagacaaacttaaagttgcattgaaaattgtg-gagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagtt 5317694  T
Q  401 gtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||| || |||||||||||||||||||||||||    
T  5317695 gtattgaaattgtaaagtgacattcattttgaaac 5317729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 212 - 434
Target Start/End: Original strand, 17919741 - 17919971
Alignment:
Q  212 ccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc------ 305  Q
    |||||| ||||||||||||| |||| ||||||||| | | |||||  ||||||||||||||||||||| |||||||| |||||||||| |||||          
T  17919741 ccgtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcatta-acataacacttttactaaactgcccttgttt 17919839  T
Q  306 ---aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
       | ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||        |||||||||    
T  17919840 tatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgt 17919939  T
Q  403 attggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||||||||||||| |||||||||||||    
T  17919940 attggaaatgtaaagtgatattcattttgaaa 17919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 210 - 385
Target Start/End: Original strand, 6377204 - 6377378
Alignment:
Q  210 ctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaata 309  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  6377204 ctccgttttaaaatgagtgtcgctttagccaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgcccaaga 6377303  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag 385  Q
    ||||||||||||||||| || ||| |||||| || |||| |||||||  ||||| |||||| | ||||||| ||||    
T  6377304 aaaagacaaacttaaagctgtattaaaaattatgcgaga-aaaagttgtagtatttattgaagataaagttaggag 6377378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 219 - 435
Target Start/End: Complemental strand, 12002471 - 12002246
Alignment:
Q  219 aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aata 309  Q
    ||||||||||||||||||  ||||| |||| | |||||| ||||||||||||||||||| |||||||| | |||||||||| |||||         |  |    
T  12002471 aaaatgagtgtcgttttagacaattgcacacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgcccttgttttatatga 12002372  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||| ||| ||        ||||||||||||||||    
T  12002371 aaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaa 12002272  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||||||||||||| ||||    
T  12002271 atgtaaaatgacattcattttaaaac 12002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 204 - 435
Target Start/End: Original strand, 48259775 - 48260006
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||||||||||||| |||||| |||| | |||||| |||  |||||||||||| |||||||||||| ||||| |||| |||    
T  48259775 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgc 48259874  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    ||         || ||||||| |||||||||||||||||||||||||||||| ||||||||||||         |||||||||||||| ||        |    
T  48259875 ccttgctttataagaaaaagataaacttaaagttgcattgaaaattgtgtgaaagaaaagtttga---------gagggtaaagttggaagaaaaaaatt 48259965  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48259966 aaagttgtattggaaatgtaaagtgacattcattttgaaac 48260006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 24040935 - 24041097
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||| ||||||||||||||||||| |||| |||||| |||||  |||||| |||| ||||||||||||||||||||||||| |||||||||| ||    
T  24040935 atactccctacgttttaaaatgagtgtcgctttagccaatttcacatggattaaggaatggaatgaaataatcattagacataacacttttactaaactg 24041034  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||         || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24041035 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 24041097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 206 - 435
Target Start/End: Complemental strand, 1429105 - 1428866
Alignment:
Q  206 ctccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc 305  Q
    |||||||||||||||||||||||| ||||||     | ||||||| ||||||||||  ||||||||||| |||||| |||||| |||||||||| |||||    
T  1429105 ctccctccgttttaaaatgagtgtggttttaggtgttgacacatatattaagaaattgaatgaaataattattagatataacacttttactaaactgccc 1429006  T
Q  306 ----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngta 395  Q
              || |||| |||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||  ||        |     
T  1429005 tttactttataagaaaaggacaaacttaaagttgaattggaaattgtgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaattt 1428906  T
Q  396 aagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  1428905 aagttgtattagaaatgtaaagtgacattcattttaaaac 1428866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 204 - 481
Target Start/End: Original strand, 50349769 - 50350056
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||| | |||| ||||||  ||| |||||||| |||| ||||||||||||||||||||||||| |||||||||| |||    
T  50349769 tactccctccgtttcaaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgc 50349868  T
Q  304 cc---------------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnn 388  Q
    ||               || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       ||| ||       
T  50349869 ccttactttataattataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagg-------tggaagaaa 50349961  T
Q  389 nnnngtaaagttgtattggaaatgtaaagtgac--attcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
         ||||||||||||||||||||||||||||  |||||||||||||| ||        |||||||||| ||||||| ||||| | ||||||||    
T  50349962 aaaattaaagttgtattggaaatgtaaagtgacatattcattttgaaacaattttttttggctaaagtgatactcattttgaaacggagggagta 50350056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 11650250 - 11650058
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||  |||||||||| ||||||| |||  |||||||||||| |||||         || |||||||||||||||||||||||||| |||||||    
T  11650250 attaagaaattgaatgaaataaccattagatatagtatttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaattgt 11650151  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| || |||||| |||||||||||||||||| ||        ||||||||||||| ||||||||||||||||||||||||||||    
T  11650150 gtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaac 11650058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 211 - 430
Target Start/End: Complemental strand, 40719248 - 40719020
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc------ 304  Q
    |||||||| ||||||||||||||||| |||||| |||| || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||          
T  40719248 tccgttttgaaatgagtgtcgttttagccaattgcacacaagttaaggaatgaaatgaaataatcattagacatcacatttttactaaactgccattgtt 40719149  T
Q  305 ---caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttg 401  Q
        |  ||||||| ||| ||||||||| ||||| |||||||| ||| ||||||| |||||| |||||| ||||||||||| ||        ||||||||    
T  40719148 ttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttg 40719049  T
Q  402 tattggaaatgtaaagtgacattcatttt 430  Q
    ||||  ||||||||| |||||||||||||    
T  40719048 tattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 219 - 381
Target Start/End: Complemental strand, 6332392 - 6332221
Alignment:
Q  219 aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc---------caata 309  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||          |  |    
T  6332392 aaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatga 6332293  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg 381  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||| |||| || |||||||||    
T  6332292 aaaagacaaacataaagttacattgaaaattgtgtgagaaaaaagttggagtatttattaagagtaaagttg 6332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 44582804 - 44582931
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||| |||||||||||||||||| ||        |||||||||||||    
T  44582804 aaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattg 44582903  T
Q  407 gaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||||||||||||| |||||||||    
T  44582904 gaaatgtaaagtgacatttattttgaaa 44582931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 219 - 435
Target Start/End: Original strand, 15698677 - 15698903
Alignment:
Q  219 aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----------aat 308  Q
    ||||| ||||| |||||| |||||| |||| |||||||| ||| |||| ||||||||||||||||||||| ||| | |||| | ||           ||     
T  15698677 aaaataagtgttgttttagccaattgcacacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtactttataag 15698776  T
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||||||||||||| ||||||| |||||||||| ||        |||||||||||||||    
T  15698777 aaaaagataaacttaaagttctattgaaaattatgtgagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtattgga 15698876  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    ||| |||||||||||||||||| ||||    
T  15698877 aatataaagtgacattcattttaaaac 15698903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 2459247 - 2459008
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||| ||||||||||||| |||| |||||| |||| | |||||||||| ||||||| || |||   | ||||||| |||||||||| |     
T  2459247 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaata 2459148  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
     ||         || ||||| ||||||||||||||| |||||||||||||  |||||||||||||||||| | |||||||||||||||| ||            
T  2459147 accttactttataagaaaaatacaaacttaaagttgtattgaaaattgtg--agagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaat 2459050  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| |||| |||||||||| |||||||||||||||||    
T  2459049 taaagttgcattgaaaatgtaaagcgacattcattttgaaac 2459008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 26252243 - 26252118
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagag--aaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||| ||||||||||||| ||        | ||||||||||||||    
T  26252243 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaatttaagttgtattggaa 26252144  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||    
T  26252143 atgtaaagtgacattcattttgaaac 26252118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 45391953 - 45392158
Alignment:
Q  481 accacctaattgactagacaattggtttaggtctcttcaaggtcttgagtcatagcaatatttagatttgaccgagtaactgacttagatacatgaatca 580  Q
    ||||| ||||||||||| || |||| ||||||||||||||||| || ||||||| |||||||||  | |||||  || | | ||| | ||||| ||||||    
T  45391953 accacttaattgactagtcatttgggttaggtctcttcaaggttttaagtcatatcaatatttaattctgaccatgtgagtaactcaaatacacgaatca 45392052  T
Q  581 aacacttatcttttgcaaatcaaacataccataagctatgtcgtgataatcagaccatcaacttccataaatagtataacatatttggatgagcagttca 680  Q
    |||||||| ||||| |||||||||||||||||| |||||| | ||||||||| | ||| |||||| || || | || ||||||||||||| ||||||  |    
T  45392053 aacacttaccttttacaaatcaaacataccatatgctatgccatgataatcaaaacataaacttctatgaacactagaacatatttggattagcagtgaa 45392152  T
Q  681 ttctat 686  Q
    ||||||    
T  45392153 ttctat 45392158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 220 - 353
Target Start/End: Original strand, 37437331 - 37437474
Alignment:
Q  220 aaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataaca-tttttactaaattgccc---------aata 309  Q
    |||||||||||| |||| || ||| |||| | |||||| |||||||||||||| ||||||||||||||| |||||||||||||||||         || |    
T  37437331 aaatgagtgtcgctttagcccattgcacacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgcccttactttataaga 37437430  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37437431 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 37437474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 254937 - 255066
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtatt 405  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||||| ||         |||||||| |||    
T  254937 aaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgcatt 255036  T
Q  406 ggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||| |||||||||||||||||    
T  255037 ggaaatgtaaagcgacattcattttgaaac 255066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 244 - 430
Target Start/End: Complemental strand, 2245988 - 2245791
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattg 334  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||| |||||||||||| || |          || |||||||||||||||||| |||||||    
T  2245988 acacatagattaagaaatggaatgaagtaatcattaaacataatatttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattg 2245889  T
Q  335 aaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||||   ||||||||||||||||||| |||||||||||||||||  ||        ||||||||||||| |||||||| ||||||||||||||    
T  2245888 aaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcatttt 2245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 17806401 - 17806562
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||||| |||||| |||| ||        |||||||||||||||    
T  17806401 aaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaagtaaaaaattaaagttgtattgga 17806500  T
Q  409 aatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaa 470  Q
    ||||||||| |||| ||||||| |||| ||        |||||||||||||||||| |||||    
T  17806501 aatgtaaagcgacactcattttaaaacaattttttttggctaaagtgacactcattttgaaa 17806562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 672307 - 672380
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  672307 aaaaagacaaacttaaatttgcattgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagttgg 672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 10690915 - 10691028
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |         || ||||||||||||||||||||||||||||||||||    
T  10690915 attaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattgaaaattgt 10691014  T
Q  343 gtgagagaaaagtt 356  Q
    |||||| |||||||    
T  10691015 gtgagataaaagtt 10691028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 22665060 - 22664939
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaat 411  Q
    |||||||||||||||||| ||| ||||||||| |||||||  ||| |||||| |||||||||||||||||| ||        ||| ||||||||||||||    
T  22665060 aagacaaacttaaagttgaattaaaaattgtgagagagaa--gttggagtatttattgagggtaaagttggaagaaattaattaacgttgtattggaaat 22664963  T
Q  412 gtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||    
T  22664962 gtaaagtgacattcattttgaaac 22664939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 84430 - 84588
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| || |||| ||||||||||||| ||||  ||||| |||| | |||||| |||  ||||||||||||||||||||||||| |||||||||| ||     
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgt 84529  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 353  Q
    ||         || ||||||||||||||||||||||||||||||||||| |||||||||    
T  84530 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaa 84588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 310 - 429
Target Start/End: Complemental strand, 52403601 - 52403482
Alignment:
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||| ||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||| |         ||||||||||||| ||    
T  52403601 aaaagacaaaattaaagttgcactgaaaattatgtgagagagaagtttgagtatttattgagggtaaagttggaatagaaaacttaaagttgtattgaaa 52403502  T
Q  410 atgtaaagtgacattcattt 429  Q
    || |||||||||||||||||    
T  52403501 atttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 244 - 435
Target Start/End: Complemental strand, 44583971 - 44583772
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc--------caataaaaagacaaacttaaagttgcattga 335  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||         || |||||||||||||||| ||||||||||    
T  44583971 acacacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgccttattttataagaaaaagacaaacttaatgttgcattga 44583872  T
Q  336 aaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||| | ||||| ||||||||| |||||  |||| ||||||||||  | ||        ||||||||||||  |||||||| |||||||||||||| ||||    
T  44583871 aaactatgtgaaagaaaagttagagtacttattaagggtaaagtcagaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaac 44583772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 244 - 435
Target Start/End: Complemental strand, 43929884 - 43929685
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattg 334  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||| |||||||| | | ||          || |||||||| |||||||||||| || |    
T  43929884 acacacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcg 43929785  T
Q  335 aaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||| ||||||||||||| | |||||| |||||||||||||||||| ||        |||||||||||||||||   ||| |||||||||||||||||    
T  43929784 aaaattatgtgagagaaaag-tggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaa 43929686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 215 - 356
Target Start/End: Original strand, 43105525 - 43105675
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc---------c 305  Q
    ||||||||||| ||||||||||  | ||| |||  | ||||||||||  ||||||||||||||||||||||||| |||||||||||| ||              
T  43105525 ttttaaaatgaatgtcgttttagactattgcacgcatattaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttat 43105624  T
Q  306 aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    || ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  43105625 aagaaaaagacaaacttaaaattgcattgaaaattgcgtgagagaaaagtt 43105675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 434
Target Start/End: Original strand, 50158230 - 50158458
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||||  ||||  |  | ||||||| ||||||||||  |||| |||||||||| || |||||| |||||||||| | |    
T  50158230 tactccctccgtttcaaaatgagtgtcactttaggctttgacacatagattaagaaatataatgcaataatcattggatataacacttttactaaacttc 50158329  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt-aaagttgt 402  Q
    ||  |      | ||| ||||||||||||| |||||||||||||||||||||| ||| || | |||||| ||||||||| ||        | ||||||||    
T  50158330 cc--ttgctttataaaattaaagttgcatt-aaaattgtgtgagagaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgt 50158426  T
Q  403 attggaaatgtaaagtgacattcattttgaaa 434  Q
    |||| |||||||||||||||||||||||||||    
T  50158427 attgaaaatgtaaagtgacattcattttgaaa 50158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 356
Target Start/End: Original strand, 1430441 - 1430610
Alignment:
Q  197 aatatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttact 296  Q
    ||||| ||||||||||| ||||||||||||||||||||||     |  |||| | ||||||||||  ||||||||||| |||||| |||||| |||||||    
T  1430441 aatattatactccctccattttaaaatgagtgtcgttttaggtgttggcacacagattaagaaatttaatgaaataataattagatataacacttttact 1430540  T
Q  297 aaattgccc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||| ||| |          || |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  1430541 aaactgcactttactttataagaaaaagacaaacttaaagttgcattggaaattgtgtgtgagaaaagtt 1430610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 207 - 356
Target Start/End: Complemental strand, 43755264 - 43755107
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc- 305  Q
    ||||||||||||||||||||||||| |||| |||||| |||| | ||||   |||| ||||||||||| |||| | | |||| ||||||||||| ||||     
T  43755264 tccctccgttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataataattaaaaa-aacacttttactaaatcgccct 43755166  T
Q  306 --------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
            || |||||||||||||||||||||  |||||||||||||||||||||||||    
T  43755165 tacttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaaaagtt 43755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 44024670 - 44024545
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||||  ||||| |||||||||||||||||| ||        |||||||| |||| ||    
T  44024670 aagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaa 44024571  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    |||||||| | |||||||||||||||    
T  44024570 atgtaaagcggcattcattttgaaac 44024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 5854250 - 5854378
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    |||||||||| ||||| |||||||||||||||||||||||  |||||||| |||||| |||||||| ||||||||| |         |||||||| ||||    
T  5854250 aaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaattaaagttgcattg 5854349  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| |||||| ||| ||||||    
T  5854350 gaaatgtaaagcgacatttattctgaaac 5854378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 309 - 437
Target Start/End: Original strand, 42650275 - 42650404
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagag-aaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgg 407  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||| | |||| ||||||| ||| ||        |||||||||||| |    
T  42650275 aaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaaagttgaagtatttcttgaaggtaaagctggaagaaaaaaattaaagttgtattag 42650374  T
Q  408 aaatgtaaagtgacattcattttgaaacta 437  Q
    |||||||||| |||||| ||||| ||||||    
T  42650375 aaatgtaaagcgacatttattttaaaacta 42650404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 13408246 - 13408321
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat-gaaataatcatt 278  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||  |||||||||||    
T  13408246 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacaaattaagaaattaaataaaaataatcatt 13408321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 45749411 - 45749506
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    |||||| ||||||||||||||||||||| |||||| |||| |||| | ||||   |||| ||| ||||||||||||||||||||| ||||||||||    
T  45749411 tactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacacttttactaaa 45749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 11134488 - 11134613
Alignment:
Q  311 aaagacaaacttaaagttgcattgaaaattgt--gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||||| |||||||||| |||||||  | |||||||||||| |||||| ||||||||| |||||| |||         |||||||| |||| |    
T  11134488 aaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaagtt-ggaaaaagaaattaaagttgcattgaa 11134586  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||    
T  11134587 aatgtaaagtgacattcattttgaaac 11134613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 30006363 - 30006209
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||| ||||||| ||||| ||||  ||||| |||| | |||||  |||  ||||||||||||||||||||||||| | |||||||||||| |         
T  30006363 tccgtttcaaaatgaatgtcgctttagtcaattgcacacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttact 30006264  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
        || ||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  30006263 ttataagaaaaagataaatttaaagttgcattgaaaattgtttgagagaaaagtt 30006209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 434
Target Start/End: Original strand, 40060866 - 40061048
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||         || ||||||| ||  ||| |||||||||||||||| |    
T  40060866 attaagaaatgaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaaatttt 40060965  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    || ||||||||||| ||         |||||||||||| | |         ||||||||||||| |||||||||||||||||||||||||||    
T  40060966 gtaagagaaaagttgga---------gagggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 40061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 350
Target Start/End: Original strand, 48319917 - 48320067
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||| ||||||||| ||||||||||||| |||| |||||| |||| | ||||||||||| ||||    ||||||||||||||| | ||||||||||||||    
T  48319917 tactacctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaagaaatggaatg----aatcattagacataagacttttactaaattgc 48320012  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
    ||         || | |||||||||||||||||||||| | |||||||||||||||    
T  48320013 ccttactttataaaagaaagacaaacttaaagttgcatcg-aaattgtgtgagaga 48320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 28200248 - 28200377
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgt--gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgta-tt 405  Q
    ||||| ||||||||||||||| ||||||||||||  | |||||||||||| |||||| |||||||||||||||||| ||        |||||||| | ||    
T  28200248 aaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattt 28200347  T
Q  406 ggaaatgtaaagtgacattcattttgaaac 435  Q
    | ||||||| || |||||||||||||||||    
T  28200348 gaaaatgtagagcgacattcattttgaaac 28200377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 356
Target Start/End: Complemental strand, 49895029 - 49894861
Alignment:
Q  197 aatatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttact 296  Q
    |||| |||||||| ||| |||||||||||||||||||||  |||||| |||| | |||||| |||| ||| ||||| |||   | ||||||| |||||||    
T  49895029 aataagatactccatccattttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttact 49894930  T
Q  297 aaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||| |  ||         || || ||||||||||||||||| |||||||||||||||||||||||||||    
T  49894929 aaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaaaagtt 49894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 38132279 - 38132320
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38132279 taaagttgtattggaaatgtaaagtgacattcattttgaaac 38132320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 84605 - 84646
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  84605 taaagttgtattggaaatgtaaagtgacattcattttaaaac 84646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 1430624 - 1430665
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  1430624 taaagttgtattagaaatgtaaagtgacattcattttgaaac 1430665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 24041112 - 24041153
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  24041112 taaagttgtattgaaaatgtaaagtgacattcattttgaaac 24041153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 43738212 - 43738261
Alignment:
Q  250 aaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  43738212 aaattaagaaatgaaataaaataattattagacataatatttttactaaa 43738261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 46554754 - 46554791
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46554754 tactccctccgttttaaaatgagtgtcgttttaaccaa 46554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 15823274 - 15823207
Alignment:
Q  205 actccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||||| ||||||||||||||| |||||||| |||||| |||| | ||||||||||| ||| |||||    
T  15823274 actcccttcgttttaaaatgagtatcgttttagccaattgcacacatattaagaaatggaataaaata 15823207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 31699209 - 31699256
Alignment:
Q  213 cgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaa 260  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||    
T  31699209 cgttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaa 31699256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 33694334 - 33694389
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaa 259  Q
    |||||| ||||||||||||||||||| ||||||||||||| || ||| ||||||||    
T  33694334 tactccttccgttttaaaatgagtgttgttttaaccaattgcatatagattaagaa 33694389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 5463817 - 5463720
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaat 300  Q
    ||||||| ||||||| ||||||||||||| |||| |||||| |||||| |||||| |||| ||| || || ||| | | ||||||| |||||| ||||    
T  5463817 atactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgcaataaagtagtcaattgtcataacaattttaccaaat 5463720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 9552384 - 9552425
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 353  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  9552384 aagacaatcttaaagttgcattgaaaattatgtgagagaaaa 9552425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 9552441 - 9552482
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  9552441 taaagttgtattggaaatgtaaaatgacattcattttaaaac 9552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 10843028 - 10842959
Alignment:
Q  197 aatatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||| ||||||| ||||||| ||||||||||||||||||  ||||| |||| | |||||| ||||||||    
T  10843028 aatataatactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaat 10842959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 28200134 - 28200191
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||| ||||||||||||||||||||| |||| |||||| |||| | ||||||||||    
T  28200134 tactccttccgttttaaaatgagtgtcgctttagccaattgcacacagattaagaaat 28200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 28200424 - 28200391
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||||||    
T  28200424 atactccctccgttttaaaatgagtgtcgtttta 28200391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 48025452 - 48025419
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||||||    
T  48025452 atactccctccgttttaaaatgagtgtcgtttta 48025419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 49468620 - 49468689
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||||||||| ||| ||||||||||||| |||| |||||| |||| | |||||| |||||||| |||||    
T  49468620 atactccctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaata 49468689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 12002200 - 12002232
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||||||||    
T  12002200 tactccctccgttttaaaatgagtgtcgtttta 12002232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 38132219 - 38132255
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgaga 348  Q
    |||||| ||||||||||||||||||||||||||||||    
T  38132219 aagacatacttaaagttgcattgaaaattgtgtgaga 38132255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 43358124 - 43358192
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    |||||||| ||||||||||||| ||||||||||  |||||  ||||| |||||| |||||||| |||||    
T  43358124 tactcccttcgttttaaaatgaatgtcgttttagtcaattgtacatatattaaggaatgaaataaaata 43358192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 43755094 - 43755054
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  43755094 taaagttgtattgaaaatgtaaagtgacgttcattttgaaa 43755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 49894847 - 49894807
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  49894847 taaagttgtattggaaatgtaaaataacattcattttgaaa 49894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 254828 - 254883
Alignment:
Q  209 cctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaa 264  Q
    ||||||||| ||||||||||||| ||||  |||||||||| | |||||||||||||    
T  254828 cctccgtttcaaaatgagtgtcgctttagtcaattacacacagattaagaaatgaa 254883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 2458956 - 2458999
Alignment:
Q  198 atatgatactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||    
T  2458956 atattatactccctccgtttcaaaatgagtgtcgttttagccaa 2458999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 43358397 - 43358366
Alignment:
Q  205 actccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||||    
T  43358397 actccctccgttttaaaatgagtgtcgtttta 43358366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 48009246 - 48009183
Alignment:
Q  209 cctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||||||| ||||||||||||||||||  ||||| |||| | |||||| |||||||| |||||    
T  48009246 cctccgtttcaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaataaaata 48009183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 50591347 - 50591393
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtg--agagaaaagtt 356  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||    
T  50591347 aagacaaacttaaaattgcattgaaaattgtgtgatagagaaaagtt 50591393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 52125046 - 52125085
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  52125046 tactccatccgttttaaaatgagtgtcgttttagccaatt 52125085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 7375242 - 7375280
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  7375242 atactccctccgtttcaaaatgagtgtcgttttagccaa 7375280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 9915685 - 9915627
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||||||| |||||||||||||||||| | ||| ||||| | |||||| ||||    
T  9915685 tactccctccgtttcaaaatgagtgtcgttttagctaataacacacatattaaggaatg 9915627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 11134372 - 11134430
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||| ||| |||||||||||||||||| |||||| |||| | |||||| ||||    
T  11134372 tactccctccatttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatg 11134430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 30686875 - 30686817
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||| || ||||||||||||||||||||||| | |||| |||| | |||||||||||    
T  30686875 tactccatctgttttaaaatgagtgtcgttttagctaattgcacacagattaagaaatg 30686817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 38530753 - 38530811
Alignment:
Q  208 ccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| ||||||||||||||||| |||| ||||||| | | | |||||||||||||||    
T  38530753 ccctccattttaaaatgagtgtcgctttagccaattatatacagattaagaaatgaaat 38530811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 46286731 - 46286785
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    ||||||| ||| ||||||||||||||||||| ||||| |||| | ||||||||||    
T  46286731 tccctccttttcaaaatgagtgtcgttttaatcaattgcacacatattaagaaat 46286785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 2611027 - 2610994
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| ||||||||||||||||||||||||||    
T  2611027 atactccatccgttttaaaatgagtgtcgtttta 2610994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 13408463 - 13408430
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||| ||||||||||||||||||||||||    
T  13408463 atactcccttcgttttaaaatgagtgtcgtttta 13408430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 17920020 - 17919987
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||| ||||    
T  17920020 atactccctccgttttaaaatgagtgtcgcttta 17919987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 26582966 - 26582925
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  26582966 taaagttgtattggaaatgtaaagtaacatttattttaaaac 26582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 233
Target Start/End: Complemental strand, 27721303 - 27721274
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtt 233  Q
    ||||||||||||||||||||||||||||||    
T  27721303 tactccctccgttttaaaatgagtgtcgtt 27721274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 32807136 - 32807103
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||| ||||||||||||||||||    
T  32807136 atactccctccgtttcaaaatgagtgtcgtttta 32807103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 34047157 - 34047186
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||    
T  34047157 tccctccgttttaaaatgagtgtcgtttta 34047186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 46046214 - 46046161
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaag 257  Q
    |||||||||||||| | ||||| |||||||||| |||||| |||||| ||||||    
T  46046214 tactccctccgtttcagaatgaatgtcgttttagccaattgcacatatattaag 46046161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 50094180 - 50094213
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| ||||||||||||||||||||||||||    
T  50094180 atactccatccgttttaaaatgagtgtcgtttta 50094213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 14593268 - 14593300
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||| ||||||    
T  14593268 tactccctccgttttaaaatgagtgttgtttta 14593300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 18794739 - 18794707
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||| ||||||||||    
T  18794739 tactccctccgttttaaaatgattgtcgtttta 18794707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 24884366 - 24884398
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||| ||||||||||    
T  24884366 tactccctccgttttaaaatgaatgtcgtttta 24884398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 26352002 - 26352034
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  26352002 tactccatccgttttaaaatgagtgtcgtttta 26352034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 30292899 - 30292931
Alignment:
Q  209 cctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||||||||||||||| ||||||    
T  30292899 cctccgttttaaaatgagtgtcgtttcaaccaa 30292931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 31491680 - 31491712
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||| |||||||||||||||||||||||||||    
T  31491680 tactctctccgttttaaaatgagtgtcgtttta 31491712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 34032001 - 34032033
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  34032001 tactccttccgttttaaaatgagtgtcgtttta 34032033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 34047433 - 34047401
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  34047433 tactccatccgttttaaaatgagtgtcgtttta 34047401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 43105692 - 43105728
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcatttt 43105728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 44024499 - 44024531
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||| ||||    
T  44024499 tactccctccgttttaaaatgagtgtcgcttta 44024531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 46045928 - 46045960
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| |||||||||||||||||||||||||    
T  46045928 tactccccccgttttaaaatgagtgtcgtttta 46045960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 46287019 - 46286987
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||| |||||||||||||||||||||||    
T  46287019 tactccctctgttttaaaatgagtgtcgtttta 46286987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 48025164 - 48025208
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    ||||||||||||||||||||  |||||| ||||||||||| ||||    
T  48025164 tactccctccgttttaaaataggtgtcgctttaaccaattgcaca 48025208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 2e-82; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 204 - 481
Target Start/End: Complemental strand, 40299079 - 40298802
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||||||||||||| |||||| |||| |||||||| |||||||||||||||| ||| ||||||||| |||||||||| |||    
T  40299079 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgc 40298980  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgta 403  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||        ||||||||||    
T  40298979 ccaagaaaaagacaaacttaaagttacattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgta 40298880  T
Q  404 ttggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||| |||||||||||||||||||||||||||| ||        |||||||||||||||||| ||||| | ||||||||    
T  40298879 ttgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggagggagta 40298802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 433
Target Start/End: Complemental strand, 5723227 - 5723006
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||||||||||||||||||||||||  ||||| |||| |||||||     | ||| |||||||||||||||||  || |||||||||| |||    
T  5723227 tactccatccgttttaaaatgagtgtcgttttagtcaattgcacacaaattaa-----ggaataaaataatcattagacat--cacttttactaaactgc 5723135  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgta 403  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||        ||||||||||    
T  5723134 ccaaggaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagttaggagaaaaaat-taaagttgta 5723036  T
Q  404 ttggaaatgtaaagtgacattcattttgaa 433  Q
    ||| ||||||||||||||||||||||||||    
T  5723035 ttgaaaatgtaaagtgacattcattttgaa 5723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 215 - 430
Target Start/End: Original strand, 19920206 - 19920419
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaag 314  Q
    ||||| ||| |||||| |||||  ||||| || | |||||||| |||||||||||||||||||||||||| ||| |||||||||| || |||| ||||||    
T  19920206 ttttagaataagtgtcattttagtcaattgcatacaaattaaggaatgaaatgaaataatcattagacatgacacttttactaaagtgtccaagaaaaag 19920305  T
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgta 414  Q
    ||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||        |||||||||||||||||||||    
T  19920306 acaa--ttaaagttgcattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgta 19920403  T
Q  415 aagtgacattcatttt 430  Q
    ||||||||||||||||    
T  19920404 aagtgacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 205 - 435
Target Start/End: Complemental strand, 17869477 - 17869238
Alignment:
Q  205 actccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc 304  Q
    |||||||| |||| ||||||| ||| ||||||  ||||| |||| | |||||| |||||||||||||||||||||||||||||| ||||| ||||||| |    
T  17869477 actccctctgtttcaaaatgaatgttgttttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtc 17869378  T
Q  305 c---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngta 395  Q
              || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||        ||    
T  17869377 tttactttataagaaaaatacaaacttaaagttgcattgaaaattgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaatta 17869278  T
Q  396 aagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  17869277 aagttgcattggaaatgtaaaatgacattcattttgaaac 17869238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 204 - 385
Target Start/End: Original strand, 33845337 - 33845512
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||||||||||| |||| ||||||||||  |||||||     | |||||||||||||||| |  ||||| |||||||||| |||    
T  33845337 tactccctccgttttaaaatgagtgtcg-tttagccaattacacgcaaattaa-----gtaatgaaataatcattacatgtaacacttttactaaactgc 33845430  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag 385  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||  |||||||||||||||||||||    
T  33845431 ccaagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaaaagttggagtaattattgagggtaaagttgggag 33845512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 207 - 435
Target Start/End: Complemental strand, 32275433 - 32275205
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc-- 304  Q
    |||||||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||| |||| || ||||||||||| ||||      
T  32275433 tccctccgttttaaaatgagcgtcgttttaaccaattgcacacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgcctt 32275334  T
Q  305 -------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaa 397  Q
            || |||||  |||||||||||||||||||||||||||||||  |||||||||||         |||||||||||||| ||        ||||    
T  32275333 tactttataagaaaaaatcaaacttaaagttgcattgaaaattgtgtgaaggaaaagtttga---------gagggtaaagttggaagaaaaaaattaaa 32275243  T
Q  398 gttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  32275242 gttgtattagaaatgtaaagtggcattcattttgaaac 32275205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 203 - 382
Target Start/End: Original strand, 42259460 - 42259648
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| ||||||||||||| | || |||||| ||||   |||||  |||||||||| ||||| ||||||||||||| |||||||||| ||    
T  42259460 atactccttccgtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacacttttactaaaatg 42259559  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    |||         || |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  42259560 cccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaagtttgagtatttattgagggtaaagttgg 42259648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 1103677 - 1103485
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||||| | |||         || ||||| ||||| |||||||| |||||||||||||    
T  1103677 attaagaaataaaatgaaataatcaccagacaaaacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaattgt 1103578  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||  ||||| |||||||||||||||||| ||        ||||||||||||||||||||||| ||||||||||||||||||    
T  1103577 gtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaac 1103485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 213 - 370
Target Start/End: Original strand, 48838601 - 48838772
Alignment:
Q  213 cgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc------- 305  Q
    ||||||||||| ||||| ||||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||| || ||           
T  48838601 cgttttaaaataagtgttgttttaaccaattgcacacaaattaaggaataaaatgaaataatcattagacataacatttatactaaactgaccttacttt 48838700  T
Q  306 -----aat--aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattga 370  Q
         |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48838701 ataaaaataaaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattga 48838772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 309 - 427
Target Start/End: Original strand, 34002159 - 34002277
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||        |||| ||||||||||    
T  34002159 aaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtattgga 34002258  T
Q  409 aatgtaaagtgacattcat 427  Q
    |||||||||||||||||||    
T  34002259 aatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 3680835 - 3681075
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||||| ||| |||||||||| ||  ||| | ||| | ||||| ||||| ||||||||||||||||||||||| | |||||||||| ||    
T  3680835 atactccctccgttttacaataagtgtcgttt-aagaaatgaaacacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactg 3680933  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    | |         || ||||||||||| ||||||||||||| |||||| ||||||||||||||| | |||| |||| | ||||||||||| ||            
T  3680934 ctcttactttataagaaaaagacaaatttaaagttgcatttaaaattctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaat 3681033  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  3681034 taaagttgtattgaaaatgtaaagtgacattcattttaaaac 3681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 19906538 - 19906415
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaat 411  Q
    |||||||||||||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||||| ||         |||||||||||||||||    
T  19906538 aagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaataaaagttgtattggaaat 19906439  T
Q  412 gtaaagtgacattcattttgaaac 435  Q
    |||||| |||||||||||||||||    
T  19906438 gtaaagcgacattcattttgaaac 19906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 211 - 356
Target Start/End: Original strand, 33056203 - 33056358
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||| ||||||||||||||||||  ||||| |||||| |||||| ||||||||||||||||||||| |||||||| |||||||||| |||||         
T  33056203 tccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgcccttact 33056302  T
Q  306 -----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
         || ||||||||||| |||||  |||||||||||||||||||||||||||||    
T  33056303 ttattaagaaaaagacaaatttaaaactgcattgaaaattgtgtgagagaaaagtt 33056358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 26963723 - 26963480
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| ||||||||||| | |||||||| ||||||| ||||||||||||| ||| ||||| |||   | ||||||| |||||||||| |     
T  26963723 atactccatccgtttcaaaatgagtgttgctttaaccatttacacacaaattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaata 26963624  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaat--tgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
     ||         || |||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||  ||||||||||||||||| ||          
T  26963623 accttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaagaaaaaa 26963524  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      |||||||| ||||||||||||||  |||||| ||||||||||    
T  26963523 attaaagttgcattggaaatgtaaatagacatttattttgaaac 26963480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 41905895 - 41906086
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||||| ||||||||||||| || |||||  |||||||||| |||||         || ||||||||||| ||||||||||||||||||||||    
T  41905895 attaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 41905994  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    || ||||||||||| |||||| |||||| ||||||||||| ||        |||||||||||| |||||||||||||||||| ||||| ||||    
T  41905995 gtaagagaaaagttggagtatttattga-ggtaaagttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaac 41906086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 198 - 435
Target Start/End: Original strand, 32345740 - 32345988
Alignment:
Q  198 atatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttacta 297  Q
    |||| ||||||||||||||| ||||||||||||| |||| |||||| |||| | ||||||||||  ||| || || |||   | ||||||| ||||||||    
T  32345740 atataatactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttacta 32345839  T
Q  298 aattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagn 386  Q
    || |  ||         || ||||| ||||||||||||||| ||||||||||||||  |||||||||||| |||||| |||||||||||||||||| ||     
T  32345840 aaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaaga 32345939  T
Q  387 nnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
           |||||||| |||| |||||||||| |||||||||||||||||    
T  32345940 aaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaac 32345988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 42044010 - 42044131
Alignment:
Q  315 acaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatg 412  Q
    |||| |||||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||| ||        ||||||||||||| |||||    
T  42044010 acaatcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatg 42044109  T
Q  413 taaagtgacattcattttgaaa 434  Q
    |||||||||||| |||||||||    
T  42044110 taaagtgacattaattttgaaa 42044131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 34733500 - 34733377
Alignment:
Q  254 taagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt 344  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | |||         || |||||||||||||||||||||||||||||||  |||    
T  34733500 taagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tgt 34733403  T
Q  345 gagagaaaagtttgagtatctattga 370  Q
    ||||||||| || |||||| ||||||    
T  34733402 gagagaaaaattggagtatttattga 34733377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 203 - 356
Target Start/End: Complemental strand, 42121784 - 42121622
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||| |||| | |||||| |||||||| |||||||||||||||||| || |||||||||| ||    
T  42121784 atacttcctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactg 42121685  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
     ||          | ||||||| | |||||||||||||||||||||||| |||||||||||||    
T  42121684 accttactttattagaaaaagatacacttaaagttgcattgaaaattgtttgagagaaaagtt 42121622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 30515099 - 30514974
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaa--gtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||| ||||||||| ||| |||||||| ||||||||||  ||| |||||| |||||| ||||||||||| ||        ||||||||||||||||    
T  30515099 aagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaa 30515000  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||||||||||||||||||    
T  30514999 atgtaaattgacattcattttgaaac 30514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 31416779 - 31416904
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||| ||||||||||||||||||||||||  ||||||||| ||  ||||| |||||||||||||||||| ||        ||||||||||||| ||    
T  31416779 aagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaa 31416878  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| ||||||||| ||||    
T  31416879 atgtaaagtgatattcattttaaaac 31416904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 36447098 - 36447223
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||| |||||| || ||||| ||||||||| ||        |||| |||||||| ||    
T  36447098 aagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaattaaaattgtattgaaa 36447197  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||||||||||||||||||    
T  36447198 atgtaaaatgacattcattttgaaac 36447223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 18733582 - 18733454
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg--gagnnnnnnngtaaagttgtattg 406  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||| || |||||| ||||||||||| |||| |  ||         |||||||||||||    
T  18733582 aaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaaaaattggagtatttattgagggtagagttcgaagaaaaaaaaattaaagttgtattg 18733483  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
     ||||||||||||||||||||||||||||    
T  18733482 aaaatgtaaagtgacattcattttgaaac 18733454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 312 - 432
Target Start/End: Original strand, 39117517 - 39117638
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagaga-aaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaa 410  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||  ||||||||||| ||||| ||        ||||||||||||| |||    
T  39117517 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagggtaatgttggaagaaaataattaaagttgtattgaaaa 39117616  T
Q  411 tgtaaagtgacattcattttga 432  Q
    ||||||  ||||||||||||||    
T  39117617 tgtaaaacgacattcattttga 39117638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 10684740 - 10684983
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| ||||| ||||||||||||| |||||||||||| |||||| ||| |||| ||||| | |     ||||||| |||||||||| |     
T  10684740 atactccatccgtttcaaaataagtgtcgttttaatcaattacacatatattaaggaataaaataaaatagttaaatatcataacaattttactaaaata 10684839  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
     ||         || ||||||||||||||||||||| ||||||||||||||  ||||||||||||| | ||| |||| ||||||||||||| ||          
T  10684840 accttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagttttaatatttattaagggtaaagttggaagaaaaaa 10684939  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      |||||||| |||| ||||||||||   |||||||||||||||    
T  10684940 attaaagttgcattgaaaatgtaaagcagcattcattttgaaac 10684983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 204 - 381
Target Start/End: Complemental strand, 6522060 - 6521872
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||| || || |||   | ||||||| || ||||||| |      
T  6522060 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataa 6521961  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagaga--aaagtttgagtatctattgagggtaaagttg 381  Q
    ||         || ||||||||||||||||| ||| ||||||||||||||||||||   || ||||||||| |||||| ||||||||||    
T  6521960 ccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagtatttattgaaggtaaagttg 6521872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 28044101 - 28044284
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    |||||||||| |||||||||||||||| || ||||| ||||||||||| |||||         || ||||||||||| ||||||||| ||||||||||||    
T  28044101 attaagaaataaaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgt 28044200  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| || ||         |||| ||||||||| ||        ||||||||||||| ||||||||||||||||||||||| ||||    
T  28044201 gtgagagaaaaattgga---------gaggataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaac 28044284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 431
Target Start/End: Original strand, 22627314 - 22627495
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    |||||| ||||||||||||||||| ||| ||||||||  ||||||||| ||||          || || |||||||||||||||||||||||||||||||    
T  22627314 attaaggaatgaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattgt 22627413  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgg--gagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttg 431  Q
    |||||||||||||| ||         ||||||||||||||  ||         ||||||||||||||||||||||||||||||||||||||    
T  22627414 gtgagagaaaagttgga---------gagggtaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 22627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 30833120 - 30833192
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg 381  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||| |||||| |||||| ||||||||||    
T  30833120 aaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagttg 30833192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 18886836 - 18886725
Alignment:
Q  254 taagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt 344  Q
    ||||||||| |||||||||||||||||| |||||  |||||||||| |||||         ||  |||||||||| ||||||||||||||||||||||||    
T  18886836 taagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgt 18886737  T
Q  345 gagagaaaagtt 356  Q
    || |||||||||    
T  18886736 gaaagaaaagtt 18886725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 42010553 - 42010648
Alignment:
Q  270 ataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||| |||||||||||| |||||         || |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  42010553 ataatcattagacataatatttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaattgtatgagagaaaagtt 42010648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 13405037 - 13405099
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| || |||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  13405037 tactccttctgttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaatgaaat 13405099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 19288405 - 19288499
Alignment:
Q  340 tgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||| |||||||||||| ||| || |||||||||||||||| | ||        |||||||||||| ||||||||||||||||||||||||||||    
T  19288405 tgtgagagagaaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 19288499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 36836184 - 36836060
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagaga--aaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||| |||||||||||||||||||| |||||||||  ||| || |||| | || ||||| ||||||||| ||        ||||||||||||| ||    
T  36836184 aagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtgtttactgagg-taaagttggaagaaaaaaattaaagttgtattgaaa 36836086  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    |||||||| |||||||||||||||||    
T  36836085 atgtaaagcgacattcattttgaaac 36836060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 10599604 - 10599546
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||| ||||    
T  10599604 tactctctccgttttaaaatgagtgtcgttttaatcaattgcacatatattaaggaatg 10599546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 22597272 - 22597231
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  22597272 taaagttgtattgaaaatgtaaagtgacattcattttgaaac 22597231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 430
Target Start/End: Original strand, 26527352 - 26527544
Alignment:
Q  246 acataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc----ccaata----aaaagacaaacttaaagttgcattgaaa 337  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||  ||||||||| |||     |  ||    |||| | ||| |||||||||||||||||    
T  26527352 acatagattaagaaatggaatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaaaaaaatttaaagttgcattgaaa 26527451  T
Q  338 attgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||| | | | ||||||||| |||||| |||||||| ||||||| | ||        ||||||||||||| ||||||||| | |||||||||||    
T  26527452 attatttaacagaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcatttt 26527544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 37815966 - 37815921
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  37815966 atactccctccgttttaaaatgagtgtcgttttagccaattgcaca 37815921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 42121592 - 42121551
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  42121592 taaagttgtattggaaatataaagtgacattcattttgaaac 42121551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 19277074 - 19277110
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgaga 348  Q
    |||||||||||||||||||||||||||||||||||||    
T  19277074 aagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 238
Target Start/End: Original strand, 10599167 - 10599202
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaac 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  10599167 atactccctccgttttaaaatgagtgtcgttttaac 10599202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 36915611 - 36915552
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||| ||||||||||||||||||||||||||| ||| || |||||| |||||| ||||    
T  36915611 atactctctccgttttaaaatgagtgtcgttttagccattttcacatagattaaggaatg 36915552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 48684964 - 48684902
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||| |||||||||||||||||| ||||| ||||| |||| | |||||| ||||||||    
T  48684964 tactccctcagttttaaaatgagtgtcgctttaatcaattgcacacagattaaggaatgaaat 48684902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 19906656 - 19906583
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatca 276  Q
    ||||||||||||||| ||||||||||||| |||| |||||| |||||  |||||| |||| ||| ||||| |||    
T  19906656 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaatagtca 19906583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 29001596 - 29001629
Alignment:
Q  315 acaaacttaaagttgcattgaaaattgtgtgaga 348  Q
    ||||||||||||||||||||||||||||||||||    
T  29001596 acaaacttaaagttgcattgaaaattgtgtgaga 29001629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 40339413 - 40339450
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40339413 tactccctccgttttaaaatgagtgtcgttttagccaa 40339450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 43813456 - 43813497
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  43813456 taaagttgtattggaaatataaagtgacattcattttaaaac 43813497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 47272278 - 47272217
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattga 370  Q
    |||||||||||| |||| |||||||||||||||||||||  |||||||  ||||| ||||||    
T  47272278 aaaaagacaaacataaaattgcattgaaaattgtgtgaggaaaaagttgaagtatttattga 47272217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 715784 - 715848
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatga 268  Q
    |||||| ||||||| |||||||||||||||||| |   ||||||||| ||||||||||| |||||    
T  715784 tactccatccgtttcaaaatgagtgtcgttttagctctttacacatatattaagaaatgcaatga 715848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 23935663 - 23935623
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  23935663 atactccctccgttttaaaatgagtgtcgctttacccaatt 23935623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 44453375 - 44453335
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  44453375 atactccttccgttttaaaatgagtgtcgttttagccaatt 44453335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 1742233 - 1742174
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||||||||||| ||||||||||||| |||| |||||| |||| | |||||| ||||    
T  1742233 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatg 1742174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 16564720 - 16564775
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||| ||||||||||| || | | |||||| ||||||||    
T  16564720 tccgttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaat 16564775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 16600942 - 16600887
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||| ||||||||||| || | | |||||| ||||||||    
T  16600942 tccgttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaat 16600887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 22298243 - 22298184
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||| |||| |||||||||||||||||| |||||| |||| | |||||| ||||    
T  22298243 atactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatg 22298184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 29530844 - 29530907
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||| ||||||||||||||||||| |||| |||||| |||| | |||||| ||| ||||    
T  29530844 atactcccttcgttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaat 29530907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 31418430 - 31418481
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||||||||| ||||||| ||||| ||||| |||||| |||||||||||    
T  31418430 tccgttttaaaataagtgtcgctttaatcaattgcacatatattaagaaatg 31418481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 36447637 - 36447684
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||| ||| ||||||||| |||||||||| |||||||||||||||    
T  36447637 aaaaagataaaattaaagttgaattgaaaattatgtgagagaaaagtt 36447684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 7795153 - 7795215
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| ||||||| ||||||||||||| |||| ||||||  ||| |||||||| ||||||||    
T  7795153 tactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaat 7795215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 18733675 - 18733585
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacattttta 294  Q
    |||||| | ||||| ||||| ||||||||||||  |||||  ||| |||||||| | || ||||||||||||||||  ||||||| |||||    
T  18733675 tactccattcgtttcaaaataagtgtcgttttagtcaattgtacacaaattaagtagtggaatgaaataatcattaagcataacactttta 18733585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 32501946 - 32501912
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaac 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  32501946 tactccctccattttaaaatgagtgtcgttttaac 32501912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 34012116 - 34012154
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  34012116 atactcactccgttttaaaatgagtgtcgttttagccaa 34012154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 40339699 - 40339641
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||| |||||||||||||  ||||||||||| |||||| |||| | |||||||||||    
T  40339699 tactccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaagaaatg 40339641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 236
Target Start/End: Original strand, 41137685 - 41137715
Alignment:
Q  206 ctccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||||||    
T  41137685 ctccctccgttttaaaatgagtgtcgtttta 41137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 45933498 - 45933552
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaag 257  Q
    ||||||||||||||||||||||||||||| |||| ||| || |||| | ||||||    
T  45933498 atactccctccgttttaaaatgagtgtcgctttagccacttgcacacagattaag 45933552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 4268568 - 4268597
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||    
T  4268568 tccctccgttttaaaatgagtgtcgtttta 4268597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 18886711 - 18886670
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||    
T  18886711 taaagttgtattgaaaatgtaaagtgagattcattttaaaac 18886670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 233
Target Start/End: Complemental strand, 18886877 - 18886848
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtt 233  Q
    ||||||||||||||||||||||||||||||    
T  18886877 tactccctccgttttaaaatgagtgtcgtt 18886848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 24133308 - 24133275
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaa 237  Q
    |||||||||||||||||||||||||| |||||||    
T  24133308 tactccctccgttttaaaatgagtgttgttttaa 24133275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 31929779 - 31929844
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatga 268  Q
    ||||||||||| ||| ||||||||||||||||||     ||||||||| ||||||||||| |||||    
T  31929779 atactccctccatttcaaaatgagtgtcgttttagatgtttacacatatattaagaaatgcaatga 31929844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 236
Target Start/End: Complemental strand, 32097352 - 32097323
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||    
T  32097352 tccctccgttttaaaatgagtgtcgtttta 32097323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 32873275 - 32873316
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  32873275 taaaattgtattggaaatataaagtgacattcattttaaaac 32873316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 45948829 - 45948796
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| ||||||||||||||||||||||||||    
T  45948829 atactccttccgttttaaaatgagtgtcgtttta 45948796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 1741946 - 1741978
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  1741946 tactccctccgtttcaaaatgagtgtcgtttta 1741978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 231
Target Start/End: Original strand, 5722957 - 5722985
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcg 231  Q
    |||||||||||||||||||||||||||||    
T  5722957 atactccctccgttttaaaatgagtgtcg 5722985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 8603928 - 8603960
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||| |||||||||||||||||||||||||||    
T  8603928 tactctctccgttttaaaatgagtgtcgtttta 8603960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 22297952 - 22297984
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  22297952 tactccatccgttttaaaatgagtgtcgtttta 22297984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 27947699 - 27947667
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  27947699 tactccctccgtttcaaaatgagtgtcgtttta 27947667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 32873127 - 32873175
Alignment:
Q  253 ttaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||||||  |||| ||||||||||||| |||||||||||| ||||||    
T  32873127 ttaagaaattgaatgcaataatcattagatataacatttttattaaatt 32873175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 34002092 - 34002128
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataaca 288  Q
    ||||||||||||||||||||||||||| || ||||||    
T  34002092 attaagaaatgaaatgaaataatcattggatataaca 34002128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 40805066 - 40805030
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  40805066 taaagttgtattgtaaatgtaaagtgacatttatttt 40805030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 42753744 - 42753708
Alignment:
Q  399 ttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  42753744 ttgtattggaaattgaaagtgacattcattttgaaac 42753708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 44057797 - 44057765
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  44057797 tactccctccgtttcaaaatgagtgtcgtttta 44057765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 9e-72; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 204 - 430
Target Start/End: Original strand, 8382399 - 8382625
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| |||||||||||||||||||||||||| | |||| ||||||||||||  |||||||| |||||||| |||||||||||| |||||||||| |||    
T  8382399 tactccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaataatcgttagacataacacttttactaaactgc 8382498  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgta 403  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||        ||||||||||    
T  8382499 ccaagaaaaagacaaacttatagttgcattgaaaattgtgtgagagaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgta 8382598  T
Q  404 ttggaaatgtaaagtgacattcatttt 430  Q
    ||| |||||||||||||||||||||||    
T  8382599 ttgaaaatgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 215 - 435
Target Start/End: Complemental strand, 39970545 - 39970325
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaag 314  Q
    |||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||| || |||||||||| ||||||| ||||||    
T  39970545 ttttaaaatgagtgtcgttttagccaattgcacataaattaaagaatgaaatgaaataatcattagacataccacttttactaaactgcccaagaaaaag 39970446  T
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagt-atctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgt 413  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |  || ||||||||||||||||||        ||| ||||||||||||||||    
T  39970445 acaaacttaaagttgcattgaaaattgtgcgagagaaaagtttgagtaaattagtgagggtaaagttgggagaaaaaac-taatgttgtattggaaatgt 39970347  T
Q  414 aaagtgacattcattttgaaac 435  Q
    ||||| ||||||||||||||||    
T  39970346 aaagtaacattcattttgaaac 39970325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 9022636 - 9022395
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| | ||||| ||||| |||||| |||||||||||||||||| |||||||||| |||    
T  9022636 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgc 9022537  T
Q  304 cc---------aataaaaagacaaactt-aaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
     |         |  |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||            
T  9022536 acttgttttatatgaaaaagacaaacttaaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaat 9022437  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  9022436 taaagttgtattggaaacgtaaagtgacattcattttaaaac 9022395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 36915605 - 36915367
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||||||||||||||||||||||| || | | |||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  36915605 tactccctccgttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataatatttttactaaattgc 36915506  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    ||         |  |||||||||||||||||||||||||||||||  ||||||| ||||  |||| ||| |||||| ||||||||||| ||        |    
T  36915505 ccttgttttatatgaaaaagacaaacttaaagttgcattgaaaat--tgtgagaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaatt 36915408  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  36915407 aaagttgtattgaaaatgtaaagtgacattcattttgaaac 36915367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 215 - 435
Target Start/End: Original strand, 3095437 - 3095656
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaag 314  Q
    ||||||||| ||||||||||||  |||||||||| ||||||| ||||  |||||||||||||||| | || ||| |||||||||| |||| ||  |||||    
T  3095437 ttttaaaat-agtgtcgttttagtcaattacacacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgccaaaggaaaag 3095535  T
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgta 414  Q
    |||||||||||||||||||||||| |||| ||||||||||||  ||||| |||||||||||||||||||||        ||||||||||||| |||||||    
T  3095536 acaaacttaaagttgcattgaaaagtgtgcgagagaaaagttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgta 3095635  T
Q  415 aagtgacattcattttgaaac 435  Q
    |||| ||||||||||| ||||    
T  3095636 aagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 208 - 430
Target Start/End: Complemental strand, 32661532 - 32661310
Alignment:
Q  208 ccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaa 307  Q
    ||||| |||| ||||||| |||  |||||  ||||| |||| |||||||| |||||||| |||||||||||||||||| || || ||||||| ||| ||     
T  32661532 ccctctgtttcaaaatgaatgtgattttagtcaattgcacacaaattaaggaatgaaataaaataatcattagacatatcacttctactaaactgcacac 32661433  T
Q  308 taaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgg 407  Q
      |||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||        |||||||||||||     
T  32661432 ggaaaagacaaacttaaagttgtattgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattga 32661333  T
Q  408 aaatgtaaagtgacattcatttt 430  Q
    ||||||| ||| |||||||||||    
T  32661332 aaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 204 - 435
Target Start/End: Original strand, 27109732 - 27109973
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||||| ||||||||||||||||||     |  |||| | ||||||||||  |||||||||||||||||| |||||| |||||||||||||     
T  27109732 tactccatccgtttcaaaatgagtgtcgttttaggtgttggcacacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgt 27109831  T
Q  304 cc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    |           || |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||            
T  27109832 cttttactttataagaaaaggacaaacttaaagttgcattggaaattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaat 27109931  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  27109932 taaagttgtattggaaatggaaagtgacattcattttgaaac 27109973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 215 - 355
Target Start/End: Complemental strand, 156449 - 156309
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaag 314  Q
    ||||||||||||||| ||||||   |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||| |||| || |||| |    
T  156449 ttttaaaatgagtgttgttttagttaattacacataaattaaggattgaaatgaaataatcattagacataacacttttattaaactgccgaagaaaagg 156350  T
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagt 355  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  156349 acaaacttaaagttgtattgaaaattgtgcgagagaaaagt 156309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 208 - 481
Target Start/End: Complemental strand, 22601371 - 22601090
Alignment:
Q  208 ccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc-- 305  Q
    ||||| |||| ||||||| ||||| |||| ||||||  ||| | |||||  ||| |||||||||||||||||||||||||  ||||||||||||| |       
T  22601371 ccctctgtttcaaaatgaatgtcgatttagccaattgtacacatattaatgaataaaatgaaataatcattagacataactcttttactaaattgtcttt 22601272  T
Q  306 -------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaag 398  Q
           || |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||| |||||||||||||| ||        |||||    
T  22601271 actttataagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaaggttggagtatttatcgagggtaaagttggaagaaacaat-taaag 22601173  T
Q  399 ttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||||||||||||||||||||||||||||||||| | |       |||||||||||||||||  ||||| | ||||||||    
T  22601172 ttgtattggaaatgtaaagtgacattcattttgaaacaaaactttttggctaaagtgacactcatcttgaaacggagggagta 22601090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 2813005 - 2812865
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaag 314  Q
    ||||||||||| |||||||||| |||||| || | |||||||| |||  ||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  2813005 ttttaaaatgaatgtcgttttagccaattgcatacaaattaagtaattgaatgaaataatcattagacataacacttttactaaactgcccaagaaaaag 2812906  T
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    | ||||||||| ||||||||||||||||| ||||||||||||    
T  2812905 aaaaacttaaa-ttgcattgaaaattgtgcgagagaaaagtt 2812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 211 - 432
Target Start/End: Original strand, 32326644 - 32326875
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||||||||||||||||| ||||  ||||| |||| | |||||| |||||||||||||||||||||||| ||||| |||||||||| |||||         
T  32326644 tccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttgtt 32326743  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttggga-gnnnnnnngtaaagtt 400  Q
        |  ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||| |||  | |        |||||||    
T  32326744 ttatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagtt 32326843  T
Q  401 gtattggaaatgtaaagtgacattcattttga 432  Q
    |||||| ||||||||||||||||| |||||||    
T  32326844 gtattgaaaatgtaaagtgacatttattttga 32326875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 211 - 356
Target Start/End: Original strand, 2803174 - 2803319
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataa 310  Q
    ||||||| ||||| ||||||| |||||| |||| |||| |||||  | ||||||||||||||||||||| |||||||| ||||| |||| || | || ||    
T  2803174 tccgtttcaaaataagtgtcgctttaactaattgcacacaaattttggaatgaaatgaaataatcattatacataacacttttattaaactgtctaagaa 2803273  T
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||    
T  2803274 aaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagtt 2803319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 6839447 - 6839286
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||| ||||||||| ||||||||||||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  6839447 tacttcctccgtttaaaaatgagtgtcgttttaacccattgtacacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgc 6839348  T
Q  304 c---------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |          || |||||||||||| |||| |||||||||||||| |||||||||||||||    
T  6839347 ctttactttataagaaaaagacaaacataaaattgcattgaaaattatgtgagagaaaagtt 6839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 7612624 - 7612498
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||        ||| ||||||||| |    
T  7612624 aaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtattgaa 7612525  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||| ||||    
T  7612524 aatgtaaagtgacattcattttaaaac 7612498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 38328967 - 38329127
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||| ||| ||||  ||||| |||| | |||||| |||| ||||||||||||||||||||||||| |||||||||| |||    
T  38328967 tactccctccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaactgc 38329066  T
Q  304 c--------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |         ||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  38329067 cttactttataatcaaaagacaaacttaaagttgcattgaaaattgtgtgagggtaaagtt 38329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 14541775 - 14541898
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaat 411  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||| ||| ||||||||| ||        |||||||||||| |||||    
T  14541775 aagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaaggataaagttggaagaaaaaaattaaagttgtattagaaat 14541874  T
Q  412 gtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||    
T  14541875 gtaaagtgacattcattttgaaac 14541898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 34461611 - 34461737
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtattgga 408  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| | |||||||||||||||||| ||         |||||||||||||||    
T  34461611 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaattaaagttgtattgga 34461710  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||    
T  34461711 aatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 43938292 - 43938186
Alignment:
Q  264 aatgaaataatcattagacataacatttttactaaattgcccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtat 363  Q
    |||||||||||||||||||| |||||||||| ||||||| |||| ||||||| ||||||||||||||||| |||| |||| |||||||||||| ||||||    
T  43938292 aatgaaataatcattagacaaaacatttttattaaattgtccaagaaaaagataaacttaaagttgcattaaaaagtgtgcgagagaaaagttggagtat 43938193  T
Q  364 ctattga 370  Q
     ||||||    
T  43938192 ttattga 43938186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 5588428 - 5588626
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc-caat-------aaaaagacaaacttaaagttgcatt-------gaa 336  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||| |||| ||||       |||||||||||||||||||| ||||       |||    
T  5588428 attaagaaatataatgaaataatcattaaacataacatttttactaaactgcctcaatttataagaaaaagacaaacttaaagttacattttacattgaa 5588527  T
Q  337 aattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    | ||||||||||||||||||||||||| |||||| ||||||||||| ||        ||||||||||||||||||||||| ||||||||| ||| ||||    
T  5588528 atttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaac 5588626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 41415073 - 41414978
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaa 298  Q
    ||||||| ||||||||||||| | |||||||||| |||||| |||||| |||||| |||||||||||||||||||||||| ||||| |||||||||    
T  41415073 atactccatccgttttaaaataaatgtcgttttagccaattgcacatatattaaggaatgaaatgaaataatcattagacgtaacacttttactaa 41414978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 11257662 - 11257542
Alignment:
Q  313 agacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||  ||||||||| ||        ||||||||||||  |||||    
T  11257662 agacaaacttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagattaaagttggaagaaaaat--taaagttgtattaaaaatg 11257565  T
Q  413 taaagtgacattcattttgaaac 435  Q
    |||||||||||||||||| ||||    
T  11257564 taaagtgacattcattttaaaac 11257542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 435
Target Start/End: Complemental strand, 30789116 - 30788935
Alignment:
Q  263 aaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 353  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||         || ||||||||||| ||||||||| |||||||||| ||||||||||||    
T  30789116 aaatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaa 30789017  T
Q  354 gtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||| |||||| || | ||||||||||| | ||        ||||||||||||| | ||||||||||||||| ||||| ||||    
T  30789016 gttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaac 30788935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 312 - 432
Target Start/End: Original strand, 34168241 - 34168355
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaat 411  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||| | |||||||||||||||| ||        ||||||||||||| ||||    
T  34168241 aagacaaacttaaagttgcattgaaaattgtgtgagagaa------gagtatttcttgagggtaaagttggaagaaaaaagttaaagttgtattgaaaat 34168334  T
Q  412 gtaaagtgacattcattttga 432  Q
    |||||||||||||||||||||    
T  34168335 gtaaagtgacattcattttga 34168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 27416629 - 27416502
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagaga----aaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtat 404  Q
    ||||||||||||||| | ||||||||||||||||||| ||||    |||||| |||||| ||||||||||||||||||  |        |||||||||||    
T  27416629 aaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaaagttggacgaaaaac--taaagttgtat 27416532  T
Q  405 tggaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||||||||||||||||||||    
T  27416531 tggaaatgtaaagtgacattcattttgaaa 27416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 11335950 - 11336106
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||||||| |||| |||||||||||  |||||  |  | ||||| | ||||||||||| |||||| ||| |||| || |||||| ||||||||||||     
T  11335950 atactccctctgtttcaaaatgagtgttattttaggctttgacacacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaatta 11336049  T
Q  303 cccaataa---aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |   ||||   ||||||||| ||||||||||||||||||||||||||||||||||||    
T  11336050 ctttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 11336106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 211 - 363
Target Start/End: Original strand, 37185578 - 37185731
Alignment:
Q  211 tccgttttaaaatgagtgtcgtt---ttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaa 307  Q
    ||||||||||||||||||| |||   |||  ||||| |||||||||||||  ||  ||||||||||||||||||||||||| |||||||||| |  | |     
T  37185578 tccgttttaaaatgagtgttgttgttttagtcaattgcacataaattaaggtatagaatgaaataatcattagacataacacttttactaaaatatcta- 37185676  T
Q  308 taaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtat 363  Q
     | |||||||||||||||||||||||||||| | |  |||||||||||| ||||||    
T  37185677 -agaaagacaaacttaaagttgcattgaaaaatatacgagagaaaagttggagtat 37185731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 8106800 - 8106900
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||| ||||||||||||| ||| ||||  ||||| |||| |||||||  ||||||||||||||||||||||||||| || ||||| |||| |||    
T  8106800 tactccctccattttaaaatgagtatcgatttagtcaattgcacacaaattaaagaatgaaatgaaataatcattagacatagcacttttattaaactgc 8106899  T
Q  304 c 304  Q
    |    
T  8106900 c 8106900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 203 - 350
Target Start/End: Complemental strand, 8471500 - 8471344
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||| ||||| ||||||||||||| |||| |||||| |||||| ||||||||||||||| || || |||   | |||| || |||||||||| |     
T  8471500 atactcccttcgtttcaaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataaagtagtcaaatgtcataccaattttactaaaata 8471401  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
     ||         || ||||||||||||||||||||||||||||||||||||||||||    
T  8471400 accttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 8471344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 41790051 - 41790214
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaa-ttaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    ||||||| ||||||| ||||| | |||||||||| |||||| || | ||| ||||  ||| |||||||||||||||||||||||| | ||||| ||||||    
T  41790051 atactccatccgtttcaaaataaatgtcgttttagccaattgcataaaaaattaatgaataaaatgaaataatcattagacataatacttttattaaatt 41790150  T
Q  302 gccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    | |          || ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  41790151 gtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgagagaaaagtt 41790214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 2067940 - 2067779
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||| |||||||||||||||||| ||||  |  | ||||||| ||||||||||| ||||||||||||||| || |||||  ||||| |||| |||    
T  2067940 tactccctcagttttaaaatgagtgtcgctttaggctttgacacatagattaagaaatggaatgaaataatcatttgatataacgcttttattaaactgc 2067841  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||         ||  ||||||| || ||||||||||||| ||||||||||||| ||||||||    
T  2067840 ccttactttataaggaaaagaccaaattaaagttgcattaaaaattgtgtgagtgaaaagtt 2067779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 26439086 - 26439041
Alignment:
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgag 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26439086 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgag 26439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 45187206 - 45187367
Alignment:
Q  204 tactccctccgttttaaa--atgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||| ||||||||| |  |||||||||| |||| |||||| |||| | |||||| |||  ||||||||||||||||||||| ||| |||||||||| |    
T  45187206 tactccatccgttttatatgatgagtgtcgctttagccaattgcacacagattaaggaatataatgaaataatcattagacatgacacttttactaaact 45187305  T
Q  302 gccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    | ||         || |||||||||||||||||||||| ||||||||  |||||||||||||||    
T  45187306 gtccttgttttataagaaaaagacaaacttaaagttgctttgaaaat--tgtgagagaaaagtt 45187367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 215 - 430
Target Start/End: Original strand, 18673022 - 18673247
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc--------a 306  Q
    ||||||||||||||||| | || ||||||||||| ||||||||||||||||| || || |||   | ||||||| |||||||||| |  ||             
T  18673022 ttttaaaatgagtgtcgctctagccaattacacacaaattaagaaatgaaataaagtagtcaaatgtcataacaattttactaaaataaccttacttatc 18673121  T
Q  307 ataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtat 404  Q
    | ||||| ||||||||||| ||| ||||||||||||||  |||||||||||| |||||| |||| | ||||||||||| ||        |||||| | ||    
T  18673122 agaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaagtcgcat 18673221  T
Q  405 tggaaatgtaaagtgacattcatttt 430  Q
    || |||||||||| ||||||||||||    
T  18673222 tgaaaatgtaaagcgacattcatttt 18673247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 16209067 - 16209020
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  16209067 aaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagtt 16209020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 42946233 - 42946122
Alignment:
Q  324 aagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacat 423  Q
    |||||||||| ||||||||||||||||||| || |||||| ||||||||||||| |||  ||        ||||||||||||  ||||||||| ||||||    
T  42946233 aagttgcattaaaaattgtgtgagagaaaaattagagtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacat 42946134  T
Q  424 tcattttgaaac 435  Q
    ||||||| ||||    
T  42946133 tcattttaaaac 42946122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 481
Target Start/End: Complemental strand, 35052587 - 35052425
Alignment:
Q  321 ttaaagttgcattgaaaat--tgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagt 418  Q
    |||||||||||||||||||  |||| ||||||||| ||||||||| |||||| || |||||||  ||        |||||||||||||||||||||||      
T  35052587 ttaaagttgcattgaaaattatgtgagagagaaaattttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaac 35052488  T
Q  419 gacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    |||||||||||| |||| ||        ||||||| |||||||||| ||||| | ||||||||    
T  35052487 gacattcattttaaaacaatttttttttgctaaagcgacactcattttgaaacggagggagta 35052425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 4760470 - 4760533
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||| ||||||||||||||||||||| |||| |||||| |||||| |||||| ||||||||    
T  4760470 atactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaat 4760533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 13109115 - 13108989
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||||||||| ||||| ||||||| ||||||||||||  |||||||||| |||||| |||| ||| || |||||| ||        |||||||| ||||    
T  13109115 aaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagagttggaagaaaaaat-taaagttgcattg 13109017  T
Q  407 gaaatgtaaagtgacattcattttgaaa 434  Q
     ||||||||| |||||||||||||||||    
T  13109016 aaaatgtaaaatgacattcattttgaaa 13108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 29931269 - 29931318
Alignment:
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgag 360  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  29931269 aaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtttgag 29931318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 7129400 - 7129356
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  7129400 aagacaaaattaaagttgcattggaaattgtgtgagagaaaagtt 7129356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 16208991 - 16208951
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  16208991 taaagttgtattgaaaatgtaaagtgacattcattttgaaa 16208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 18666632 - 18666672
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  18666632 taaagttgcattggaaatgtaaagtgacattcattttgaaa 18666672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 41790229 - 41790268
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaa 433  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  41790229 taaagttgtattagaaatgtaaagtgacattcattttgaa 41790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 481
Target Start/End: Complemental strand, 156282 - 156197
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||        |||||||||| ||||||||| ||| ||||||||||    
T  156282 taaagttatattgggaatgtaaagtgacattcattttgaaacaat--tttttggctaaagtgatactcattataaaacgaagggagta 156197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 4530107 - 4530050
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||| ||||||| |||||||||||||||||| |||||| |||| | ||||||||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaagaaat 4530050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 5044253 - 5044326
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    ||||| ||||| ||||||||| ||| |||||||||||| |||||||||  ||||| |||||||  |||||||||    
T  5044253 aaaaatacaaatttaaagttgtattaaaaattgtgtgatagaaaagttgaagtatttattgagaataaagttgg 5044326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 8471322 - 8471281
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  8471322 taaagttgcattggaaatgtaaagcgacattcattttgaaac 8471281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 9880418 - 9880471
Alignment:
Q  209 cctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||||| ||||||||||||| ||||||||||| |||| | |||||||||||    
T  9880418 cctccgtttcaaaatgagtgtcgctttaaccaattgcacacagattaagaaatg 9880471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 13368147 - 13368110
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||||||||||||||| |||||||||||    
T  13368147 tactccctccgttttaaaatgagtgttgttttaaccaa 13368110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 7129342 - 7129302
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  7129342 taaagttgcattgaaaatgtaaagtgacattcattttgaaa 7129302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 9880699 - 9880667
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||||||||    
T  9880699 tactccctccgttttaaaatgagtgtcgtttta 9880667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 34168124 - 34168168
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||    
T  34168124 tactccctccgtttcaaaatgagtgtcgctttagccaattacaca 34168168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 41414948 - 41414912
Alignment:
Q  320 cttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||||||||||||||| |||||||    
T  41414948 cttaaagttgcattgaaaattgtgtgagaaaaaagtt 41414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 8107195 - 8107242
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||| ||||||||  |||||||||||| |||||||||||||    
T  8107195 aaaaagacaaatttaaagttctattgaaaattgtctgagagaaaagtt 8107242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 18666571 - 18666618
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||   |||||||||||| ||||||||||||||||||||||    
T  18666571 aaaaagacaacactaaagttgcattaaaaattgtgtgagagaaaagtt 18666618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 9304545 - 9304603
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    ||||| |||||||||||||||||||||| ||||| |||||| |||| | | ||||||||    
T  9304545 atactacctccgttttaaaatgagtgtcattttagccaattgcacacataataagaaat 9304603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 9304833 - 9304799
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaa 237  Q
    |||||| ||||||||||||||||||||||||||||    
T  9304833 atactctctccgttttaaaatgagtgtcgttttaa 9304799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 39463212 - 39463250
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  39463212 atactccctccgtttcaaaatgagtgtcgttttagccaa 39463250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 39463498 - 39463440
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||||||| ||||||||||||| |||| |||||| |||| | |||||| ||||    
T  39463498 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatg 39463440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 39698865 - 39698827
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  39698865 atactccctccgtttcaaaatgagtgtcgttttagccaa 39698827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 1774097 - 1774130
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||| ||||||||||||||||||||||    
T  1774097 aaaaagacaaaattaaagttgcattgaaaattgt 1774130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 1774171 - 1774212
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  1774171 taaagttgtattgaaaatgtaaattgacattcattttaaaac 1774212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 2803349 - 2803390
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||| |||||||| ||||||||||||||||| ||||||||||    
T  2803349 taaaattgtattgaaaatgtaaagtgacatttattttgaaac 2803390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 3203368 - 3203327
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| |||| ||||||||||||||||| ||||||||||    
T  3203368 taaagttgcattgaaaatgtaaagtgacatttattttgaaac 3203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 4760756 - 4760719
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  4760756 tactccctccgttttaaaataagtgtcgttttagccaa 4760719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 427
Target Start/End: Original strand, 8107271 - 8107304
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcat 427  Q
    ||||||||||||| ||||||||||||||||||||    
T  8107271 taaagttgtattgaaaatgtaaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 22699337 - 22699374
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  22699337 tactccctccgtttcaaaatgaatgtcgttttaaccaa 22699374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 29931343 - 29931384
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||    
T  29931343 taaagttgtattggaaatgtaaagtgatatttattttaaaac 29931384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 34168405 - 34168368
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  34168405 tactccctccgtttcaaaatgagtgtcgttttagccaa 34168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 38329141 - 38329182
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| |||| |||||||||||||||||| ||||    
T  38329141 taaagttgtattgaaaatataaagtgacattcattttaaaac 38329182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 39765782 - 39765815
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||| ||||||||||||||||||    
T  39765782 atactccctccgtttcaaaatgagtgtcgtttta 39765815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 45187396 - 45187437
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| |||| |||||||||||| ||||||||||    
T  45187396 taaagttgtattgaaaatataaagtgacatttattttgaaac 45187437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 4989437 - 4989465
Alignment:
Q  208 ccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||||    
T  4989437 ccctccgttttaaaatgagtgtcgtttta 4989465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 15749734 - 15749770
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaacc 239  Q
    |||||||||| |||| |||||||||||||||||||||    
T  15749734 atactccctctgtttcaaaatgagtgtcgttttaacc 15749770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 33870795 - 33870755
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||| |||| ||||||||||| ||||||||||    
T  33870795 taaagttgtattgaaaatataaagtgacatccattttgaaa 33870755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 9e-72; HSPs: 84)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 211 - 470
Target Start/End: Original strand, 38982073 - 38982332
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataa 310  Q
    ||||||| ||||||| |||||||||| |||||| |||| |||||||| ||||||||||||||||| | |||| ||||| ||||| |||| ||||||| ||    
T  38982073 tccgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataatcttaagacgtaacacttttattaaactgcccaagaa 38982172  T
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaa 410  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||    
T  38982173 aaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattggaaa 38982272  T
Q  411 tgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaa 470  Q
    | |||||||||||||||||| |||| ||        ||||||||||||||||||||||||    
T  38982273 tataaagtgacattcattttaaaacaattttttttagctaaagtgacactcattatgaaa 38982332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 4371592 - 4371364
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||| |||||||||||||||||||| |||| |||| |||||||| |||| |||||||||||||||||||||| || |||||||||| ||    
T  4371592 atactccctccgtttcaaaatgagtgtcgttttaactaattgcacacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaactg 4371493  T
Q  303 cccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
    || || ||||||||||    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||        |||||||||    
T  4371492 cctaagaaaaagacaa----aaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagtttggagaaaaaaattaaagttgt 4371397  T
Q  403 attggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||| |||||||||||||    
T  4371396 attggaaatgtaaagtgacgttcattttgaaac 4371364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 204 - 481
Target Start/End: Original strand, 166561 - 166847
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||||||||  ||| |||||| |||| | |||||| ||||||||||||||||||||||| |||||| |||||||||| |||    
T  166561 tactccctccgtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgc 166660  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    ||         |  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||        |    
T  166661 ccttgtattatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 166760  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||||||||||||||||||||||||||||||||||||| ||        ||||||| |||||||||| ||||| | ||||||||    
T  166761 aaagttgtattggaaatgtaaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttgaaacggagggagta 166847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 207 - 435
Target Start/End: Complemental strand, 13066942 - 13066714
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca 306  Q
    ||||||| || |||||||| ||| |||||| |||||| || | |||||||| ||||||||||||||||||||||||| |||| |||||||||| ||  ||    
T  13066942 tccctccattctaaaatgaatgttgttttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacacaacacttttactaaactggtca 13066843  T
Q  307 ataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    | |||| || |||  ||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||||||| |         |||||||||||||    
T  13066842 agaaaaggaaaaatctaaagttgcattgaaaattgtgcaagagaaaagttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattg 13066743  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||| ||||||||||||||||||    
T  13066742 gaaatgtaaaatgacattcattttgaaac 13066714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 204 - 481
Target Start/End: Complemental strand, 36660666 - 36660382
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||| |||| ||||||||||||| |||| | |||| |||| | |||||| |||||||||||||||||||||||||||||| |||||||||| ||     
T  36660666 tactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgt 36660567  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    ||         || ||||||||||||||||||||| ||  |||||  ||||||||||||| | |||||| |||||||||||||||||| ||        |    
T  36660566 ccttactttataagaaaaagacaaacttaaagttgtataaaaaat--tgtgagagaaaagctggagtatttattgagggtaaagttggaagaaaaaaatt 36660469  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    |||||||||||| |||||||||||||||||||||||||||| ||        |||||||||||||||||| ||||| ||||||||||    
T  36660468 aaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacgaagggagta 36660382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 203 - 430
Target Start/End: Complemental strand, 36783597 - 36783361
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||| ||||||||| ||||||||| ||| |||| |||||| |||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36783597 atacttcctccgtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataacatttttactaaattg 36783498  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    |||         |  ||||||||||| |||||||||||||||||||||||||||||||||||| ||| || || | ||||||||||| | ||            
T  36783497 cccttacttgttatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaat 36783398  T
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    || |||||||||||||||||||||||||||| |||||    
T  36783397 tagagttgtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 214 - 435
Target Start/End: Original strand, 4751452 - 4751683
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc-------- 305  Q
    ||||||||||||||||||||||| |||||| |||| | |||||| |||||||||||||||||||||||||||||| ||||||||||   |||            
T  4751452 gttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgtttta 4751551  T
Q  306 -aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgta 403  Q
     |  ||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||         ||||||||||    
T  4751552 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgta 4751651  T
Q  404 ttggaaatgtaaagtgacattcattttgaaac 435  Q
    || ||||| |||||||||||||||||||||||    
T  4751652 ttagaaatataaagtgacattcattttgaaac 4751683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 218 - 435
Target Start/End: Complemental strand, 12992280 - 12992065
Alignment:
Q  218 taaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaagaca 317  Q
    |||||||| ||| |||||| |||||| || | |||||||| |||||||||||||||||||||||||||||| |||||||||| ||  ||| |||| || |    
T  12992280 taaaatgaatgttgttttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaactggtcaagaaaaggaaa 12992181  T
Q  318 aacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaag 417  Q
    ||  ||||||||||||||||||||||  ||||||||||| |||||| |||||||| ||||||||| |         |||||||||||| ||||||||||     
T  12992180 aatctaaagttgcattgaaaattgtgcaagagaaaagttggagtatttattgaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaa 12992083  T
Q  418 tgacattcattttgaaac 435  Q
    ||||||||||||||||||    
T  12992082 tgacattcattttgaaac 12992065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 275 - 430
Target Start/End: Complemental strand, 28640242 - 28640088
Alignment:
Q  275 cattagacataacatttttactaaattgcccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggt 374  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||  ||||| ||||||||||    
T  28640242 cattagacataacatttttactaaattgcccaa-aaaaagacaaacttaaagttgtattgaaaattgttcgagagaaaagttgaagtatttattgagggt 28640144  T
Q  375 aaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||||||        |||||||| |||| ||||||||||||||||| |||||    
T  28640143 aaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttatttt 28640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 214 - 435
Target Start/End: Original strand, 4742188 - 4742419
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc-------- 305  Q
    |||||||||||||||||||||||  ||||| |||| | |||||| ||||||||||||||||||| |||||||||| ||||||||||   |||            
T  4742188 gttttaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgtttta 4742287  T
Q  306 -aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgta 403  Q
     |  ||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||         ||||||||||    
T  4742288 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgta 4742387  T
Q  404 ttggaaatgtaaagtgacattcattttgaaac 435  Q
    || ||||| |||||||||||||||||||||||    
T  4742388 ttagaaatataaagtgacattcattttgaaac 4742419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 793633 - 793758
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||| |||||| ||        ||||||||||||||||    
T  793633 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaagaaaaaaattaaagttgtattggaa 793732  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||    
T  793733 atgtaaagtgacattcattttgaaac 793758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 207 - 435
Target Start/End: Original strand, 4833551 - 4833785
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc- 305  Q
    ||||||| ||||||||||||||||| |||| |||||| ||||||  ||||| |||||||| || || | |   | ||||||| |||||||||| |  ||     
T  4833551 tccctccattttaaaatgagtgtcgctttagccaattgcacatatgttaaggaatgaaataaagtagttaaatgtcataacaattttactaaaataacct 4833650  T
Q  306 -aat--aaaaagacaaacttaaagttgcattgaaaattgtgtg--agagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagtt 400  Q
     | |  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||        |||||||    
T  4833651 tacttaaaaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagtt 4833750  T
Q  401 gtattggaaatgtaaagtgacattcattttgaaac 435  Q
    | |||| ||||||||||  ||||||||||||||||    
T  4833751 gcattgaaaatgtaaagcaacattcattttgaaac 4833785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 204 - 430
Target Start/End: Complemental strand, 15400413 - 15400177
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||||||||||||||||     |  |||| | ||||| ||||  ||||||||||| |||||| |||||| |||||||||| | |    
T  15400413 tactccctccgttttaaaatgagtgtcgttttaggtgttggcacacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattc 15400314  T
Q  304 cc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    ||          || ||||||  |||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||| ||||||||| ||            
T  15400313 cctttactttataagaaaaaggaaaacttaaagtttcattggaaattgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaat 15400214  T
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||||||||||||||||||||||||||||||||    
T  15400213 taaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 32690746 - 32690882
Alignment:
Q  298 aattgcccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaa 397  Q
    ||||||| || |||||||||||| |||||||||||||||||||||| ||||||||||||  ||||| ||||||| ||||||||| |||        ||||    
T  32690746 aattgcctaagaaaaagacaaacctaaagttgcattgaaaattgtgcgagagaaaagttgaagtatttattgagagtaaagttgagagaaaaaaattaaa 32690845  T
Q  398 gttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32690846 gttgtatttgaaatgtaaagtgacattcattttgaaa 32690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 43257772 - 43257925
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||| | |||||  |||||||||||||||||||||||||||||| || ||||||| ||    
T  43257772 atactccctccgttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactg 43257870  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgaga 348  Q
    |||         || ||| ||||||||||||||||||||||||||||||||||||    
T  43257871 cccttactttataagaaatagacaaacttaaagttgcattgaaaattgtgtgaga 43257925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 42329573 - 42329698
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||  ||||| |||| ||||||||||||| ||        ||||||||||||||||    
T  42329573 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattggaa 42329672  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||    
T  42329673 atgtaaagtgacattcattttgaaac 42329698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 211 - 360
Target Start/End: Original strand, 8960954 - 8961111
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc------ 304  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||| |||  ||| ||||||||||||||||||||| |||||||||| || |          
T  8960954 tccgttttaaaatgagtgtcgttttactcaattacacatatattaaggaatataataaaataatcattagacataacacttttactaaactgtcttattt 8961053  T
Q  305 --caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgag 360  Q
       || ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  8961054 tataagaaaaagataaatttaaagttgcaatgaaaattgtgtgagagaaaagtttgag 8961111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 34171287 - 34171165
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaat 411  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||         ||||||||||||| ||||    
T  34171287 aagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagtt-ggaaaaaaaaattaaagttgtattgaaaat 34171189  T
Q  412 gtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||| ||||    
T  34171188 gtaaagtgacattcattttaaaac 34171165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 27810473 - 27810347
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||  ||        ||||||||||||| |    
T  27810473 aaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatttattgaggataaagttgaaagaaaaaaattaaagttgtattgaa 27810374  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||    
T  27810373 aatgtaaagtgacattcattttgaaac 27810347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 12167521 - 12167684
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||| |||||||| ||||||||||||| |||| | |||| |||| ||||||||||||  |||||||||||||||||||| |||| |||||||||| ||    
T  12167521 atactctctccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactg 12167620  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaa-ttgtgtgagagaaaagtt 356  Q
    |||         || |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  12167621 cccttactttataagaaaaggtcaaacttaaagttgcattgaaaatttgtgtgagagaaaagtt 12167684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 24436454 - 24436552
Alignment:
Q  206 ctccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc 304  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||| ||||||||||||||||||| |||||| |||||| ||| ||||    
T  24436454 ctccctccgttttaaaatgagtgtcgttttagccaattgcacatagattaaggaataaaatgaaataatcattagatataacacttttaccaaaatgcc 24436552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 312 - 431
Target Start/End: Original strand, 29653541 - 29653662
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||||||||||  |||||||||  |||||||||||| |||||| |||||||||||||||||| ||        ||||||||||||||||    
T  29653541 aagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 29653640  T
Q  410 atgtaaagtgacattcattttg 431  Q
    ||||||| ||||||||||||||    
T  29653641 atgtaaaatgacattcattttg 29653662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 33585002 - 33585127
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||| ||||||||||| ||        ||||||||||||| ||    
T  33585002 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaa 33585101  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    |||||||||||| |||||||| ||||    
T  33585102 atgtaaagtgacgttcattttaaaac 33585127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 33693972 - 33693877
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaa 298  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||  |||| ||||||||||||||||||| ||||| |||||||||    
T  33693972 atactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttactaa 33693877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 433
Target Start/End: Original strand, 33822530 - 33822653
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||  ||||| |||||| ||||||||||  ||        ||||||||||||| ||    
T  33822530 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaattaaagttgtattgaaa 33822629  T
Q  410 atgtaaagtgacattcattttgaa 433  Q
    ||||||||||||||||||||||||    
T  33822630 atgtaaagtgacattcattttgaa 33822653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 264 - 435
Target Start/End: Complemental strand, 39059986 - 39059807
Alignment:
Q  264 aatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaag 354  Q
    ||||||||||||||||||||||||| |||||||||| | |||         |  ||||| |||||||||||||||||||||||||||| ||||| ||||     
T  39059986 aatgaaataatcattagacataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaat 39059887  T
Q  355 tttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    || |||||| |||||||||||||||| | ||        ||||||||||||| ||||||||||  ||||||||||||||||    
T  39059886 ttggagtatttattgagggtaaagttagaagaaaaaat-taaagttgtattgaaaatgtaaagcaacattcattttgaaac 39059807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 14979962 - 14980191
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||| ||||||||||||| ||||  |  |  |||| | ||||||||||| ||||||||||||||| || |||||| |||||| ||| ||    
T  14979962 atactccctccgtttcaaaatgagtgtcgctttaggctttggcacacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactg 14980061  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    |||         || ||||||||||| ||||||||||||||||||||||| ||   ||||||| |||         ||||||||||||| ||            
T  14980062 cccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgaga---aaaagttggag---------agggtaaagttggaaggaaaaaat 14980149  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14980150 taaagttgtattggaaatgtaaagtgacattcattttgaaac 14980191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 211 - 381
Target Start/End: Original strand, 27652238 - 27652419
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||||||||||||||||| ||||  |||||||||| | ||||||||||| ||| ||||| |||   | ||||||| |||||||||| |  ||         
T  27652238 tccgttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttact 27652337  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttg 381  Q
        || ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||| |||||||||||||||||    
T  27652338 ttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 207 - 356
Target Start/End: Complemental strand, 16886307 - 16886156
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc- 305  Q
    ||||||| |||||| ||||||||||||||| |||||| | || | || ||| |||||||||||||||| ||||||| |||||  ||||||||| |||||     
T  16886307 tccctccattttaacatgagtgtcgttttagccaattgcgcacagatcaaggaatgaaatgaaataattattagacgtaacacatttactaaactgccct 16886208  T
Q  306 -aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
     | |  | |   |||||||||||||||||||||||||||||| |||||||||    
T  16886207 tactttataacaaaacttaaagttgcattgaaaattgtgtgatagaaaagtt 16886156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 31889960 - 31889799
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||| | ||||  |  | ||||| | ||||||||||| ||||||||||| |||  | ||||| |||| |||||| |||    
T  31889960 tactccctccgtttcaaaatgagtgtagctttaggctttgacacacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgc 31889861  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||         || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31889860 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 31889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 33741592 - 33741466
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||| |||||||||||||||||| ||||||||||  ||||||||| |||||| |||| ||||||||||| | ||         ||||||| |||| |    
T  33741592 aaaaagataaacttaaagttgcattggaaattgtgtggtagaaaagttagagtatatattaagggtaaagtttgaagaaaaaaatgaaagttgcattgaa 33741493  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||| |||||||    
T  33741492 aatgtaaagtgacattcatattgaaac 33741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 203 - 356
Target Start/End: Complemental strand, 41567016 - 41566864
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| |||||||  || |||||| | |||| |||| || ||||  |||||||| ||||||| |||| |||||| ||||| |||||| ||    
T  41567016 atactccatccgtttcaaaatgaaggtggttttagctaattgcacacaagttaatgaatgaaataaaataattattaaacataatatttt-actaaactg 41566918  T
Q  303 cccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
     | || |||| ||||||||||||||||||||||||||| |  ||||||||||||    
T  41566917 tcaaagaaaatgacaaacttaaagttgcattgaaaattatacgagagaaaagtt 41566864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 29044844 - 29044773
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt-gagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||||    
T  29044844 aagataaacttaaagttgcattgaaaattgtgtggagagaaaagtttgagcatttattgaggataaagttgg 29044773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 31557367 - 31557487
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||   ||||||||| ||        ||||||||||||| |    
T  31557367 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaa------tagtatttattgaaaataaagttggaagaaaaaaattaaagttgtattgaa 31557460  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||| ||||||||||||||||||    
T  31557461 aatgtaaaatgacattcattttgaaac 31557487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 34919976 - 34919875
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||| | ||| ||||||||| ||| |||| ||||||||||| | |||||| |||||||| ||||||||||| |||||| || |||||||||| |||    
T  34919976 tactcccttcctttcaaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgc 34919877  T
Q  304 cc 305  Q
    ||    
T  34919876 cc 34919875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 204 - 338
Target Start/End: Original strand, 4967403 - 4967546
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||||| ||||  |  | ||||| | ||||||||||| ||||||||||||||| || |||||  |||||||||| |||    
T  4967403 tactccctccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgc 4967502  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaa 338  Q
    ||         || ||||||||||| ||||||||||||||||||    
T  4967503 ccttactttataaaaaaaagacaaaattaaagttgcattgaaaa 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 7388147 - 7388263
Alignment:
Q  247 cataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaa 337  Q
    |||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||| ||         || ||||||| ||| |||||||||||||||||    
T  7388147 catagattaataaatgaaataaaataatcattagacataatatttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaa 7388246  T
Q  338 attgtgtgagagaaaagtt 356  Q
    ||  |||||||||||||||    
T  7388247 at--tgtgagagaaaagtt 7388263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 32690684 - 32690746
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatca 276  Q
    ||||||| |||| ||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  32690684 gttttaagatgaatgtcgttttaaccaattgcacacaaattaataaatgaaatgaaataatca 32690746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 4011612 - 4011733
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattg 334  Q
    ||||||| ||||||||||| ||| ||||||||||| || ||||| ||||| ||||| |||||         || ||||||| ||| ||||||||||||||    
T  4011612 acacatagattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattg 4011711  T
Q  335 aaaattgtgtgagagaaaagtt 356  Q
    |||||||||||||| |||||||    
T  4011712 aaaattgtgtgagaaaaaagtt 4011733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 32963034 - 32963159
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||||||||||||||| |||||||| ||||||| ||| |  |||||||| |||||| |||||||||||||||| | |         |||||||||||||    
T  32963034 aaaaagacaaacttaaa-ttgcattggaaattgtttgaaaaagaaaagttagagtatttattgagggtaaagtttgaa--aaaaaaataaagttgtattg 32963130  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||  ||||||||||||||    
T  32963131 gaaatgtaaagtggtattcattttgaaac 32963159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 26660996 - 26660933
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||| | |||||| ||||||||    
T  26660996 atactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 26660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 26932589 - 26932526
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||| | |||||| ||||||||    
T  26932589 atactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 26932526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 34445940 - 34446002
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||| ||||||||    
T  34445940 atactccctccgttt-aaaatgagtgtcgctttaaccaattgcacatatattaaggaatgaaat 34446002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 8336319 - 8336377
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| | |||||| ||||    
T  8336319 tactccctccattttaaaatgagtgtcgttttagccaattacacaaatattaaggaatg 8336377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 17674320 - 17674209
Alignment:
Q  324 aagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacat 423  Q
    |||||| || |||||||||||||||||||||||  ||||| |||||||| ||||||| |  |        ||||||| ||||| ||| ||||||||||||    
T  17674320 aagttgtatagaaaattgtgtgagagaaaagttgaagtatttattgaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacat 17674221  T
Q  424 tcattttgaaac 435  Q
    ||||||||||||    
T  17674220 tcattttgaaac 17674209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 39566424 - 39566362
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||| | |||||| ||||||||    
T  39566424 tactccctccatttcaaaatgagtgtcgctttaaccaattacacacatattaaggaatgaaat 39566362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 17674393 - 17674340
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc 305  Q
    ||||| |||||||||||||||||||||| |||||||||||||| |||| |||||    
T  17674393 attaaaaaatgaaatgaaataatcattaaacataacatttttattaaactgccc 17674340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 27658683 - 27658724
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  27658683 taaagttatattggaaatgtaaagtgacattcattttgaaac 27658724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 31889784 - 31889743
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  31889784 taaagttgtattggaaatgtaaagtgacatttattttgaaac 31889743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 203 - 361
Target Start/End: Original strand, 36296043 - 36296212
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||| |||||||||||||||||||||| |||| |||||| |||||  |||||  |||||||| |||||||||   |  ||| || |||||||||| |     
T  36296043 atactcactccgttttaaaatgagtgtcgctttagccaattgcacatggattaaagaatgaaataaaataatcaaatgtaatagcaattttactaaaata 36296142  T
Q  303 ccc--aat-------aaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagt 361  Q
     ||  |||       || |||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  36296143 accttaatttataggaacaagacaaacttaaagttgcattgaaaattgtgtgagcgagaaaagttggagt 36296212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 3305919 - 3305983
Alignment:
Q  203 atactccctccgtttt-aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||| || |||||| ||||||||    
T  3305919 atactctctccgttttcaaaatgagtgtcgttttaaccaattgcacgtatattaaggaatgaaat 3305983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 33741813 - 33741766
Alignment:
Q  258 aaatgaaatgaaataatcattagacataacatttttactaaattgccc 305  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  33741813 aaatggaatgaaataatcattagatataccatttttactaaattgccc 33741766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 34972561 - 34972620
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||| | ||||| |||||    
T  34972561 atactccctccgttttaaaatgagtgtcgctttagccaattgcacacagattaataaatg 34972620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 1513180 - 1513138
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataa 286  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    
T  1513180 acacacaaattaagaaatgaaatgaaataatcattaaacataa 1513138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 2729986 - 2729948
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2729986 atactccctccgtttcaaaatgagtgtcgttttaaccaa 2729948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 13761953 - 13761887
Alignment:
Q  210 ctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatca 276  Q
    |||||||||||||||| ||||||||||  ||||| || ||||||||||||||| ||| || ||||||    
T  13761953 ctccgttttaaaatgaatgtcgttttagtcaattgcaaataaattaagaaatggaataaagtaatca 13761887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 29653712 - 29653678
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaac 238  Q
    |||||||||||||||||||||||||||||||||||    
T  29653712 tactccctccgttttaaaatgagtgtcgttttaac 29653678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 33822412 - 33822481
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||||||||||||| ||||||| | ||||||||||||||| |||| | |||||  |||||||| |||||    
T  33822412 atactccctccgtttcaaaatgaatatcgttttaaccaattgcacacagattaattaatgaaataaaata 33822481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 31557248 - 31557284
Alignment:
Q  200 atgatactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31557248 atgatactccctccgttttaaaacgagtgtcgtttta 31557284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 33693847 - 33693811
Alignment:
Q  320 cttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||||||||||||||| |||||||    
T  33693847 cttaaagttgcattgaaaattgtgtgagaaaaaagtt 33693811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 41845393 - 41845433
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  41845393 taaaattgtattgaaaatgtaaagtgacattcattttgaaa 41845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 43257962 - 43257998
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||| |||||||||||||||||||||||||||||    
T  43257962 taaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 4011747 - 4011834
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagtac 482  Q
    ||||||||||| |||||||||||||||| |||||||| |||| ||        |||||||||||||||||| ||||| | |||||||||    
T  4011747 taaagttgtatcggaaatgtaaagtgacgttcattttaaaacaat-ttttttagctaaagtgacactcattttgaaaaggagggagtac 4011834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 6519211 - 6519156
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||||||   ||||||||| | |||||| ||||||||    
T  6519211 tccgttttaaaatgagtgtcgttttagttaattacacacatattaaggaatgaaat 6519156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 15167213 - 15167174
Alignment:
Q  201 tgatactccctccgttttaaaatgagtgtcgttttaacca 240  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  15167213 tgatactccctccgttttaaagtaagtgtcgttttaacca 15167174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 29653424 - 29653463
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  29653424 tactccctccattttaaaatgagtgtcgttttagccaatt 29653463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 356
Target Start/End: Original strand, 41845344 - 41845379
Alignment:
Q  321 ttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||||||||||||||||||||||||| |||||||||    
T  41845344 ttaaagttgcattgaaaattgtgtgatagaaaagtt 41845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 42329463 - 42329518
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||| ||||||||| ||| ||||||||||| |||| |||||||| ||||||||    
T  42329463 tccgtttcaaaatgagtatcgctttaaccaattgcacacaaattaaggaatgaaat 42329518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 7145090 - 7145036
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaag 257  Q
    ||||||||||||||| ||||||||||| | |||| |||||| |||| ||||||||    
T  7145090 atactccctccgtttcaaaatgagtgttgctttagccaattgcacacaaattaag 7145036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 12167692 - 12167734
Alignment:
Q  393 gtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||    
T  12167692 gtaaagttgtattgaaaatgtagagtgacattcattttaaaac 12167734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 39335118 - 39335168
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaag 257  Q
    ||||||||||||||||||| ||||||||||  ||||| || ||||||||||    
T  39335118 tccctccgttttaaaatgaatgtcgttttagtcaattgcatataaattaag 39335168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 42103975 - 42104033
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||||||| ||||||||||||| |||| |||||| |||| | |||||| ||||    
T  42103975 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatg 42104033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 42661851 - 42661949
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    ||||||| | ||||| ||||||||||||| |||| |||||| |||| | |||||| |||||||| ||||| |||   | ||||||| |||||| |||||    
T  42661851 atactccattcgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttaccaaatt 42661949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 3306208 - 3306175
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||| |||||    
T  3306208 atactccctccgttttaaaatgagtgtcatttta 3306175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 10344854 - 10344887
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||| ||||||||||||||||||    
T  10344854 atactccctccgtttcaaaatgagtgtcgtttta 10344887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 34919795 - 34919754
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| |||| | |||||||||||||||||||||||||||    
T  34919795 taaagttatattaggaatgtaaagtgacattcattttgaaac 34919754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 39804249 - 39804216
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||| ||||||||||||    
T  39804249 atactccctccgttttaaaataagtgtcgtttta 39804216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 42104263 - 42104226
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  42104263 tactccctccgtttcaaaatgagtgtcgttttagccaa 42104226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 42978265 - 42978232
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||| ||||||||||||||||||||||||||||    
T  42978265 atacttcctccgttttaaaatgagtgtcgtttta 42978232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 4631160 - 4631128
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  4631160 tactccctccgtttcaaaatgagtgtcgtttta 4631128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 8961122 - 8961162
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  8961122 taaagttgcattggaattgtaaagtgacatccattttgaaa 8961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 15566452 - 15566484
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||| ||||    
T  15566452 tactccctccgttttaaaatgagtgtcgcttta 15566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 29051623 - 29051659
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||||||| |||| |||||||||||||||||||    
T  29051623 taaagttgtattagaaaggtaaagtgacattcatttt 29051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 38369827 - 38369859
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||| ||||||||||    
T  38369827 tactccctccgttttaaaatgaatgtcgtttta 38369859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 6e-70; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 203 - 481
Target Start/End: Complemental strand, 4536803 - 4536528
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||| ||| |||||| |||||  |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| || |||||||||| ||    
T  4536803 atactccctccatttcaaaatgtgtgtctgtttagccaattgcacataaattaaggaatgaaatgaaataatcattagacatatcacttttactaaactg 4536704  T
Q  303 cccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||   |||||| |||||| | |||||||||||||||||||        |||||||||    
T  4536703 cccaagaaaaagacaaatttaaagttgcattgaaaattgtgtgag---aaagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgt 4536607  T
Q  403 attggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||||||||||||||||||||||||||||| ||        |||||||||||||||||| ||||| | ||||||||    
T  4536606 attggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggagggagta 4536528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 215 - 435
Target Start/End: Complemental strand, 1360397 - 1360177
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaag 314  Q
    ||||||||||| ||||||||||   |||| |||| |||||||| |||| ||| ||||||||||||| ||| ||| |||||||||| ||| ||| ||||||    
T  1360397 ttttaaaatgaatgtcgttttagttaattgcacacaaattaagtaatggaataaaataatcattagccatgacacttttactaaactgcacaagaaaaag 1360298  T
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgta 414  Q
    |||||||||||||||||||||||||||| | |||||||||||  ||||| ||||||||||||| |||||||        ||||||||||||||||||| |    
T  1360297 acaaacttaaagttgcattgaaaattgtttaagagaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtattggaaatgca 1360198  T
Q  415 aagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||    
T  1360197 aagtgacattcattttgaaac 1360177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 211 - 435
Target Start/End: Complemental strand, 6592189 - 6591965
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataa 310  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||| | || ||    
T  6592189 tccgttttaaaatgagagtcgttttaaccaattagacacgaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgtcaaagaa 6592090  T
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||  |||||  | |||||||||||         ||||||||||||||||    
T  6592089 aaagacaaacttaaag-tgcattgaaaattatgcaagagaaaagttggagtattcattgaaaggaaagttgggagaaaaaaaattaaagttgtattggaa 6591991  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||| ||||||||| ||||    
T  6591990 atgtaaaatgatattcattttaaaac 6591965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 211 - 436
Target Start/End: Complemental strand, 7743634 - 7743400
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||| ||||||||||||| |||| |||||| |||| | |||||  ||| ||||||||||||||| ||| |||||| ||||||||| ||||||         
T  7743634 tccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgcccttact 7743535  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttg 401  Q
        || ||||||||||| |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||        ||||||||    
T  7743534 ttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttg 7743435  T
Q  402 tattggaaatgtaaagtgacattcattttgaaact 436  Q
    ||||||||||||||||||||||||||||| |||||    
T  7743434 tattggaaatgtaaagtgacattcattttaaaact 7743400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 4840654 - 4840875
Alignment:
Q  219 aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aata 309  Q
    ||||||||||||||||||  |  |  |||| | ||||||||||| ||||||||||||||| || ||||| ||||||||||| |||||         || |    
T  4840654 aaaatgagtgtcgttttaggctttggcacacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataaga 4840753  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||        ||||||||||||||||    
T  4840754 aaaagacaaaattaaagttgcattgaaaactgtgtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 4840853  T
Q  410 atgtaaagtgacattcattttg 431  Q
    ||||||||||||||||||||||    
T  4840854 atgtaaagtgacattcattttg 4840875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 201 - 432
Target Start/End: Original strand, 36360284 - 36360522
Alignment:
Q  201 tgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaat 300  Q
    ||||||| ||||| ||||||||||||||||| ||||  ||||| |||  |||||||  |||||||||||||||||||||||||||||| ||||||||||     
T  36360284 tgatacttcctccattttaaaatgagtgtcgctttagtcaattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaac 36360383  T
Q  301 tgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
    |||||         || ||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||  ||          
T  36360384 tgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgt--gagaaaagtttgagtatatattgagggtaaagttgaaagaaaaaa 36360481  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttga 432  Q
      ||||||||||||| ||||| ||||||| |||||||||||    
T  36360482 attaaagttgtattgaaaatgcaaagtgatattcattttga 36360522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 34225983 - 34225829
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||| ||||||||||||| |||| |||||| |||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||||         
T  34225983 tccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttact 34225884  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
        || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34225883 ttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 34225829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 24775429 - 24775189
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| |||||||||| |||||||||||||||  ||||| |||| ||||||||  ||  |||||||||||||||||| |||||| |||||||||| |||    
T  24775429 tactccatccgttttaagatgagtgtcgttttagtcaattgcacacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgc 24775330  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
     |         || ||||| ||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||        |    
T  24775329 tcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaacttgggagaaaaaaatt 24775230  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||| |||||||| ||||||||||||||| ||||||| ||||    
T  24775229 aaaattgtattgaaaatgtaaagtgacaatcattttaaaac 24775189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 435
Target Start/End: Original strand, 43388569 - 43388809
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||||| |||| |||||| |||| | ||||||||||  ||| || || |||   | ||||||| |||||||||| |      
T  43388569 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 43388668  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    ||         || ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||        |    
T  43388669 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 43388768  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| |||| |||||||||| |||||||||||||||||    
T  43388769 aaagttgcattgaaaatgtaaagcgacattcattttgaaac 43388809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 252 - 434
Target Start/End: Original strand, 1298740 - 1298931
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    |||||||||| ||||||||||||||||  | ||||| |||||||||||||||||         || ||||||||||| |||||||||||||||||||| |    
T  1298740 attaagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 1298839  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||||||||| ||| || |||||||| ||||||| |  |        |||||||||||| ||||||||||||||||||||||||||||    
T  1298840 gtgagagaaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 248 - 435
Target Start/End: Complemental strand, 14511646 - 14511460
Alignment:
Q  248 ataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaagacaaacttaaagttgcattgaaaattgtgtgag 347  Q
    |||||||||| |||||||||||||||||||||||||||||  ||| | |||| ||  ||| ||||||||||| |||||||| ||||||||||||||  |     
T  14511646 ataaattaaggaatgaaatgaaataatcattagacataacccttt-attaaaatgttcaagaaaaagacaaatttaaagttacattgaaaattgtgcaaa 14511548  T
Q  348 agaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||| |||||| |||||||| ||||||| ||||        ||| ||||||||  |||||||||| |||||||||||||||||    
T  14511547 agaaaagttagagtatttattgaggataaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcattttgaaac 14511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 203 - 430
Target Start/End: Original strand, 40987193 - 40987418
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||||||||||||||||| |||| |  ||| |||| | |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  40987193 atactccctccgttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattg 40987292  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
     ||         || ||||||| ||| |||||||||||||||||||  ||||||||||||||| ||         |||||||||||||| ||            
T  40987293 tccttactttataagaaaaagataaatttaaagttgcattgaaaat--tgtgagagaaaagttgga---------gagggtaaagttggaagaaaaaaat 40987381  T
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  40987382 taaagttgtattgaaaatgtaaagcgacattcatttt 40987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 33093493 - 33093368
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||| || ||| |||||||||||||||||| ||        ||||||||||||| ||    
T  33093493 aagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaa 33093394  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||    
T  33093393 atgtaaagtgacattcattttgaaac 33093368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 314 - 435
Target Start/End: Complemental strand, 2459896 - 2459773
Alignment:
Q  314 gacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaat 411  Q
    |||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||||| ||        |||||||| |||||||||    
T  2459896 gacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaat 2459797  T
Q  412 gtaaagtgacattcattttgaaac 435  Q
    |||||| |||||||||||| ||||    
T  2459796 gtaaagcgacattcattttaaaac 2459773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 10580885 - 10581010
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||||| ||        ||||||||||||| ||    
T  10580885 aagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaa 10580984  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    || |||||||| ||||||||||||||    
T  10580985 atataaagtgatattcattttgaaac 10581010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 37107056 - 37106915
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca------ataa-----aaagacaaacttaaagttgcattgaaaatt 340  Q
    ||||||||||| ||||||||||| ||| |||| |||| ||||||||||||||||       ||||     ||||| ||||||||||||||||||||||||    
T  37107056 attaagaaatggaatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattgaaaatt 37106957  T
Q  341 gtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    |||||||||||||||| |||||| |||| |||||||||||||    
T  37106956 gtgtgagagaaaagttggagtatttattaagggtaaagttgg 37106915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 214 - 435
Target Start/End: Original strand, 29795121 - 29795342
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc-------- 305  Q
    |||| ||| |||| |||||||||  ||||| |||  | |||||  |||| ||||||||||||||||||||||| | |||||||||| |||||            
T  29795121 gtttcaaattgagcgtcgttttagtcaattgcacgcagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttatttta 29795220  T
Q  306 -aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtat 404  Q
     || ||||||||||  |||||||||||||||||||||||||| ||||||||| |||         ||||||||||||| ||        |||||||||||    
T  29795221 taagaaaaagacaactttaaagttgcattgaaaattgtgtgaaagaaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtat 29795311  T
Q  405 tggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||||||    
T  29795312 tggaaatgtaaagtgacattcattttgaaac 29795342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 775910 - 776037
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||| |||||| |||||||||||||||| | ||        |||||||| ||||    
T  775910 aaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagttagaagaaaaaat-taaagttgcattg 776008  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
     |||||||||| |||||||||||||||||    
T  776009 aaaatgtaaagcgacattcattttgaaac 776037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 16316835 - 16316710
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| || ||| ||||||  ||||| |||| ||        |||||||||||||||    
T  16316835 aaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaatttggaagaaaaaaattaaagttgtattgga 16316736  T
Q  409 aatgtaaagtgacattcattttgaaa 434  Q
    ||| |||||||||||||| |||||||    
T  16316735 aatataaagtgacattcaatttgaaa 16316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 203 - 356
Target Start/End: Complemental strand, 42970130 - 42969969
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaa---- 298  Q
    ||||||| ||||||||||||| |||||||||||| |||||| |||||| |||||| |||| ||||||||||| ||||||| ||||| |||||||||        
T  42970130 atactccttccgttttaaaataagtgtcgttttagccaattgcacatatattaaggaatgcaatgaaataattattagacgtaacacttttactaactgc 42970031  T
Q  299 ----attgcccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
        |||    || |||| || || ||||||||||||||||||||||||||||| |||||||    
T  42970030 tcttattttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgagaaaaaagtt 42969969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 430
Target Start/End: Original strand, 39866697 - 39866820
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagag--aaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    |||| |||||||||||||||| |||||||||||||||||||  |||| ||||||||| |||||| ||||||||||| ||        |||| ||| ||||    
T  39866697 aaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaagttggaagaaaaaaattaaatttgcattg 39866796  T
Q  407 gaaatgtaaagtgacattcatttt 430  Q
    ||||||||||| ||||||||||||    
T  39866797 gaaatgtaaagcgacattcatttt 39866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 244 - 435
Target Start/End: Original strand, 43344175 - 43344373
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattg 334  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||   |||         || ||||||| ||  ||||||||| ||||    
T  43344175 acacataaattatgaaatcaaatgaaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattg 43344274  T
Q  335 aaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||| |||||||||||| || |||||| |||| | ||||||||||| ||        ||||||||||||| |||| ||| ||||||||||||||||||    
T  43344275 aaaattatgtgagagaaaaattagagtatttattaaaggtaaagttggaagaaaaat--taaagttgtattgaaaatataaggtgacattcattttgaaa 43344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 310 - 416
Target Start/End: Complemental strand, 43460898 - 43460792
Alignment:
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||  ||||| |||||||||||| ||||| ||        ||||||||||||||||    
T  43460898 aaaagacaaaattaaagttgtattgaaaattatgtgagagaaaagttgaagtatttattgagggtaacgttggaagagaaaacttaaagttgtattggaa 43460799  T
Q  410 atgtaaa 416  Q
    |||||||    
T  43460798 atgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 214 - 359
Target Start/End: Original strand, 45147911 - 45148053
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataac-atttttactaaattgcccaataaaa 312  Q
    |||||||||| | |||||||||| ||||||||||||| |||||  |||| ||||||||||||||||||||||||   | |||||  ||     || ||||    
T  45147911 gttttaaaataaatgtcgttttagccaattacacatagattaatgaatgtaatgaaataatcattagacataactgctcttactttat----aaaaaaaa 45148006  T
Q  313 agacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttga 359  Q
    | |||| |||||||||||||| ||||||||||||||||||| |||||    
T  45148007 atacaatcttaaagttgcattaaaaattgtgtgagagaaaaatttga 45148053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 41984538 - 41984418
Alignment:
Q  317 aaacttaaagttgcattgaaaattg--tgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgta 414  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||| |||| | ||||||||||| ||        ||||||||||||| |||||||    
T  41984538 aaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgta 41984439  T
Q  415 aagtgacattcattttgaaac 435  Q
    ||| || ||| ||||||||||    
T  41984438 aagcgatatttattttgaaac 41984418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 18374792 - 18374916
Alignment:
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaa 410  Q
    ||||||||  ||||| ||| ||||||||||||| ||   |||||||||||||| |||||||||||||||||| ||        |||| || |||||||||    
T  18374792 aaagacaagtttaaaattgtattgaaaattgtgagaagaaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaaa 18374891  T
Q  411 tgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||| ||||    
T  18374892 tgtaaagtgacattcattttcaaac 18374916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 25332698 - 25332571
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattg--tgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||||||||||||| ||||| |||||||||||  || |||||||||||| |||||| |||||||| ||||||||| ||        |||||||| ||||    
T  25332698 aaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagttggaagaaaaaat-taaagttgcattg 25332600  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||| | ||| |||||||||||||    
T  25332599 gaaatgtaaggcgacgttcattttgaaac 25332571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 44228707 - 44228611
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaatta-cacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    |||||||||||||||||||||| ||||| |||| ||||||  ||||   ||||| ||||| |||||||||||||||||| |||||| ||||||||||    
T  44228707 tactccctccgttttaaaatgaatgtcgctttagccaatttgcacacggattaaaaaatggaatgaaataatcattagatataacacttttactaaa 44228611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 4766238 - 4766285
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4766238 aaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 4766285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 12342334 - 12342272
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||  |||||| ||||||||    
T  12342334 tactccctccgttttaaaatgagtgtcgttttagccaattgcacatttattaaggaatgaaat 12342272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 203 - 356
Target Start/End: Complemental strand, 40410684 - 40410522
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||| |||||||||||||| ||||||| ||||  |  |  |||| | ||||||||||| ||||| ||||||||| || |||||  ||||| |||| ||    
T  40410684 atactctctccgttttaaaataagtgtcgctttaggcgttgtcacacagattaagaaatggaatgacataatcattggatataacgcttttattaaactg 40410585  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||         || ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  40410584 cccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtcagagaaaagtt 40410522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 14378160 - 14378321
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||| |||||||||||||||||||||| |||| | |||| |||| |  ||||  |||  |||||||||||||||  | |||||| |||||||||| |||    
T  14378160 tactctctccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgc 14378259  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||         || ||||||| ||| |||||||||||||||||||| || ||||||||||||    
T  14378260 ccttactttataagaaaaagataaatttaaagttgcattgaaaattatgcgagagaaaagtt 14378321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 441142 - 441201
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| |||||||| ||||    
T  441142 atactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatg 441201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 481
Target Start/End: Complemental strand, 34225814 - 34225728
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||        ||||||| |||||||||| ||||| ||||||||||    
T  34225814 taaagttgtattgaaaatgtaaagtgacattcattttgaaacaat-ttttttggctaaagcgacactcattttgaaacgaagggagta 34225728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 34546536 - 34546492
Alignment:
Q  197 aatatgatactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  34546536 aatatgctactccctccgtttcaaaatgagtgtcgttttaaccaa 34546492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 204 - 350
Target Start/End: Original strand, 4566033 - 4566188
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||| | ||||| ||||| ||| ||||| |||     ||||||| |||||||||| |      
T  4566033 tactctctccgttttaaaatgagtgtcgctttagtcaattacacacagattaaaaaatgtaataaaatagtcaaatatcataacaattttactaaaataa 4566132  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
    ||         || ||||||| ||| ||||||||||||||||||||||||||||||    
T  4566133 ccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgagaga 4566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 29396592 - 29396654
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||| | |||||| ||||||||    
T  29396592 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaat 29396654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 4132974 - 4133015
Alignment:
Q  200 atgatactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  4132974 atgatactccctccgtttcaaaatgagtgtcgttttagccaa 4133015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 4766299 - 4766340
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  4766299 taaagttgtattgaaaatgtaaattgacattcattttgaaac 4766340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 14698116 - 14698075
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  14698116 aaaaatacaaacttaaagttgtattgaaaattgtgtgagaga 14698075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 6247674 - 6247706
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttt 235  Q
    |||||||||||||||||||||||||||||||||    
T  6247674 atactccctccgttttaaaatgagtgtcgtttt 6247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 14378335 - 14378371
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14378335 taaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 16807429 - 16807473
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||    
T  16807429 tactccctccgttttaaaatgagtgtcgctttagccaattgcaca 16807473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 16846710 - 16846754
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||    
T  16846710 tactccctccgttttaaaatgagtgtcgctttagccaattgcaca 16846754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 45081818 - 45081886
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    |||||| ||||||||||||||||||||||||||   |||| |||| | |||||| |||||||| |||||    
T  45081818 tactccatccgttttaaaatgagtgtcgttttagaaaattgcacacatattaaggaatgaaataaaata 45081886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 1381916 - 1381820
Alignment:
Q  267 gaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||||||||||||||||||||| |||||||||| ||| |         || ||||||| ||||||||| |||||||||||||  |||||||||||||||    
T  1381916 gaaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaat--tgtgagagaaaagtt 1381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 11171937 - 11171886
Alignment:
Q  250 aaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    ||||||||||||  ||| ||||||||| ||||||||||| ||||||||||||    
T  11171937 aaattaagaaattgaataaaataatcaatagacataacacttttactaaatt 11171886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 25383396 - 25383455
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||| ||||||||||||||||||||| |||| |||||| |||  |||||||| ||||    
T  25383396 atactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaatg 25383455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 30855346 - 30855307
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  30855346 tactccctccgtttcaaaatgagtgtcgctttaaccaatt 30855307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 43480774 - 43480829
Alignment:
Q  206 ctccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||| ||||| ||||||||||||||||||| ||||| |||| | ||||||||||    
T  43480774 ctcccttcgtttcaaaatgagtgtcgttttaagcaattgcacacagattaagaaat 43480829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 435
Target Start/End: Original strand, 45372645 - 45372684
Alignment:
Q  396 aagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaac 45372684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 2460016 - 2459958
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||| ||||||||||||||||||||| |||||||||| || ||||  |||||| |||    
T  2460016 atactctctccgttttaaaatgagtgtcattttaaccaaatatacatggattaaggaat 2459958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 4133263 - 4133205
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||||||||||| ||||||||||||| |||| |||||| |||| | |||||| ||||    
T  4133263 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatg 4133205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 18579117 - 18579155
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  18579117 atactccatccgttttaaaataagtgtcgttttaaccaa 18579155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 29809054 - 29808992
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| || |||| ||||||||||||| |||| |||||| |||| |||||||| ||||||||    
T  29809054 tactccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaat 29808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 8774293 - 8774196
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||| ||||||||||||||||||| ||||||  ||||| |||| | |||||| |||| ||| ||||| |||   | ||||||| |||||| |||||    
T  8774293 tactccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaatgtaataaaatagtcaaatgtcataacaattttaccaaatt 8774196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 8789342 - 8789439
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||| ||||||| ||||||||||| ||||||  ||||| |||| | |||||| |||||||| ||||| |||   | ||||||| |||||| |||||    
T  8789342 tactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttaccaaatt 8789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 12342047 - 12342084
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  12342047 tactccttccgtttcaaaatgagtgtcgttttaaccaa 12342084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 14698053 - 14698012
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| |||| |||||||||| |||||||||||||||||    
T  14698053 taaagttgcattgaaaatgtaaagcgacattcattttgaaac 14698012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 14698230 - 14698173
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||||| ||||| ||||||||||||| |||| |||||| |||| | ||||||||||    
T  14698230 tactcccttcgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaat 14698173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 16807715 - 16807682
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaa 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  16807715 tactctctccgttttaaaatgagtgtcgttttaa 16807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 16846996 - 16846963
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaa 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  16846996 tactctctccgttttaaaatgagtgtcgttttaa 16846963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 25332812 - 25332755
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||||||||||||||||||||||||| |||| | |||| |||| | |||||| |||    
T  25332812 tactccctccgttttaaaatgagtgtcgctttagctaattgcacacagattaaggaat 25332755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 27964573 - 27964540
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||| ||||||||||||||||||    
T  27964573 atactccctccgtttcaaaatgagtgtcgtttta 27964540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 32228210 - 32228177
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| ||||||||||||||||||||||||||    
T  32228210 atactccatccgttttaaaatgagtgtcgtttta 32228177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 35799457 - 35799424
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||| ||||||||||    
T  35799457 atactccctccgttttaaaatgaatgtcgtttta 35799424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 37724200 - 37724233
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||| ||||    
T  37724200 atactccctccgttttaaaatgagtgtcgcttta 37724233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 42743268 - 42743223
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    ||||||||||| ||||||||||||||||| |||| |||||| ||||    
T  42743268 atactccctccattttaaaatgagtgtcgctttagccaattgcaca 42743223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 45148063 - 45148104
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||    
T  45148063 taaagttttattgaaaatgtaaagtgacattcattttaaaac 45148104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 1381790 - 1381750
Alignment:
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  1381790 aaagttatattggaaatgtaaagtaacattcattttaaaac 1381750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 1422103 - 1422135
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  1422103 tactccgtccgttttaaaatgagtgtcgtttta 1422135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 14286160 - 14286128
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||| ||||||||||||||||||||||||||||    
T  14286160 tacttcctccgttttaaaatgagtgtcgtttta 14286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 40987454 - 40987422
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  40987454 tactccatccgttttaaaatgagtgtcgtttta 40987422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 45423848 - 45423784
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatga 268  Q
    |||||||||| ||||||||||| |||||||| ||    ||||||| | |||||||||||||||||    
T  45423848 tactccctccattttaaaatgaatgtcgtttaaaatttttacacacatattaagaaatgaaatga 45423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 1e-67; HSPs: 106)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 4392136 - 4391905
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||||||||||||  |||||| || | ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||    
T  4392136 tactccctccgtttcaaaatgagtgtcgttttggccaattgcatacaaattaagaaatgaaatgaaataattattagacataacacttttactaaactgc 4392037  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgta 403  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||        |||| |||||    
T  4392036 ccaagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgta 4391937  T
Q  404 ttggaaatgtaaagtgacattcattttgaaac 435  Q
     |  ||||||||||||| ||||||||| ||||    
T  4391936 ctaaaaatgtaaagtgatattcattttaaaac 4391905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 211 - 435
Target Start/End: Original strand, 35099294 - 35099518
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataa 310  Q
    |||||||||||||| ||||||||||| | |||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | ||| ||| ||    
T  35099294 tccgttttaaaatgggtgtcgttttagcaaattgcacacaaattaagaaacgaaatgaaataatcattagacataacacttttactatactgctcaagaa 35099393  T
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaa 410  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||        |||||||||||||||||    
T  35099394 aaagacaaacttaaaattgcattgaaaattgtgcgagagaaaagtttgagtatttattaagggtaaagttgggagaaaaaaattaaagttgtattggaaa 35099493  T
Q  411 tgtaaagtgacattcattttgaaac 435  Q
    |||||| ||||||| ||| ||||||    
T  35099494 tgtaaaatgacatttattatgaaac 35099518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 429
Target Start/End: Original strand, 15514647 - 15514872
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||||||||||||| ||||||||||  ||||| |||||||| |||| |||| ||||||||||||||||||||||||| ||||||||| ||||    
T  15514647 tactccatccgttttaaaatgaatgtcgttttagtcaattgcacataaaataaggaatgtaatgaaataatcattagacataacaattttactaatttgc 15514746  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgt 402  Q
    ||||  ||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||         |||||||||    
T  15514747 ccaa-gaaaagacaaacttaaagttgcattgaaaattatgcgagagaaaagttggagtatctattgaaggtaaagttgggagaaaaaaaattaaagttgt 15514845  T
Q  403 attggaaatgtaaagtgacattcattt 429  Q
    |||||||||||||||||||||| ||||    
T  15514846 attggaaatgtaaagtgacatttattt 15514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 203 - 356
Target Start/End: Complemental strand, 16240809 - 16240656
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| |||||||||||||||||| || ||| |||| |||||| | |||||||||||||||||||||||||||||||||||||||||  |    
T  16240809 atactccatccgtttcaaaatgagtgtcgttttagcctattgcacacaaattagggaatgaaatgaaataatcattagacataacatttttactaaacag 16240710  T
Q  303 cccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16240709 cccaagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtt 16240656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 198 - 416
Target Start/End: Original strand, 647498 - 647725
Alignment:
Q  198 atatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttacta 297  Q
    ||||| ||||||||| |||| ||||| |||||||||||| |||||| |||| | |||||||||||||||||||||||||||||| |||||| ||||||||    
T  647498 atatgttactccctcggtttcaaaataagtgtcgttttacccaattgcacacagattaagaaatgaaatgaaataatcattagatataacagttttacta 647597  T
Q  298 aattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnn 388  Q
    || |||||         || |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||| ||       
T  647598 aactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaa 647697  T
Q  389 nnnngtaaagttgtattggaaatgtaaa 416  Q
         ||||||||||||| |||||||||    
T  647698 aaaattaaagttgtattgaaaatgtaaa 647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 3000984 - 3000753
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||| | |||||||||||||||||| | | ||  |||||||  ||  |||| |||||||||| ||||||||| |||| |||||||||| |||    
T  3000984 tactccatccgtctcaaaatgagtgtcgttttagctagttgtacataaaagaatgaatgtaatgaaataaacattagaca-aacacttttactaaactgc 3000886  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgt 402  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||         |||||||||    
T  3000885 ccaagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgt 3000786  T
Q  403 attggaaatgtaaagtgacattcattttgaaac 435  Q
    |||| ||||||||||| ||||||||||| ||||    
T  3000785 attgaaaatgtaaagtaacattcattttaaaac 3000753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 215 - 435
Target Start/End: Original strand, 27483116 - 27483336
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc--------- 305  Q
    ||||||||||||||||| |||| || ||| |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| |||             
T  27483116 ttttaaaatgagtgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttat 27483215  T
Q  306 aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtatt 405  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||| ||         |||||||||||||| ||        ||||||||||||    
T  27483216 aagaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttgga---------gagggtaaagttggaagaaaaaaattaaagttgtatt 27483306  T
Q  406 ggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||    
T  27483307 ggaaatgtaaagtgacattcattttgaaac 27483336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 225 - 435
Target Start/End: Complemental strand, 83515 - 83297
Alignment:
Q  225 agtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaaga 315  Q
    |||||||||||| |||||| |||| |||||||| ||||||||||| ||||||||||||| |||| |||||||||| | |||         || |||||||    
T  83515 agtgtcgttttagccaattgcacacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaaga 83416  T
Q  316 caaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaa 415  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||| ||        ||||||||||||| ||||||||    
T  83415 caaacttaaagttgcattgaaaattgcgtgagagaaaagttagagtatttaatgagggtaaagttggaagaaaaaat-taaagttgtattgaaaatgtaa 83317  T
Q  416 agtgacattcattttgaaac 435  Q
    | ||||||||||||||||||    
T  83316 aatgacattcattttgaaac 83297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 54933114 - 54933357
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||||||||||||||||| |||| |||||| |||||| |||||| |||||||| || || |||   | ||||||| |||||||||| |     
T  54933114 atactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaata 54933213  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
     ||         || |||| |||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||| ||          
T  54933214 accttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaa 54933313  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      |||||||| |||||||||||||||||||||||||||||||||    
T  54933314 attaaagttgcattggaaatgtaaagtgacattcattttgaaac 54933357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 228 - 435
Target Start/End: Original strand, 36310198 - 36310402
Alignment:
Q  228 gtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaagacaaacttaaagt 327  Q
    |||||||||  |||||  ||| |||||||  |||| ||||||| ||||||||||| |||||||||||||||||||| ||| ||||| ||||||   ||||    
T  36310198 gtcgttttagtcaattgtacacaaattaaagaatggaatgaaacaatcattagac-taacatttttactaaattgctcaagaaaaatacaaac---aagt 36310293  T
Q  328 tgcattgaaaattgtgtgagagaaaagtttgagta-tctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattca 426  Q
    |||||||||||||||| ||||||||| |||||||| | |||||| ||||||||||||||        ||||||||||||||||||||||| ||||||| |    
T  36310294 tgcattgaaaattgtgcgagagaaaaatttgagtattttattgaaggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacattta 36310393  T
Q  427 ttttgaaac 435  Q
    |||||||||    
T  36310394 ttttgaaac 36310402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 37225621 - 37225747
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| ||        |||||||||||||||    
T  37225621 aaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtattgga 37225720  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||    
T  37225721 aatgtaaagtgacattcattttgaaac 37225747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 25061934 - 25061705
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||||| |||||||||||||||||| || ||| |||| | |||||| |||||||||||||||||||||||||||||| |||||||||| | |    
T  25061934 tactccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactac 25061835  T
Q  304 cc------aataa-aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaa 396  Q
    ||       |||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||         ||| |||||||||||||        |||    
T  25061834 ccttactttataagaaaaacaaacttaaagttgcattgaaaattgtatgagagaaaagttgga---------gagagtaaagttgggagaaaaaaattaa 25061744  T
Q  397 agttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  25061743 agttgtattggaaatgtaaagtggcattcattttaaaac 25061705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 31290886 - 31291046
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||||||| ||||||||||||| |||||||||| |||    
T  31290886 tactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaataattattagacataacacttttactaaactgc 31290985  T
Q  304 c---------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |           | ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  31290986 ctttattttattagaaaaaga-aaacttaaagttgcaatgaaaattgtgtgagagaaaagtt 31291046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 219 - 435
Target Start/End: Original strand, 46362937 - 46363163
Alignment:
Q  219 aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aata 309  Q
    |||||||||||||||| | |  ||| |||| | |||||| |||  ||||||||||||||||||| |||||||||||||||| || ||         || |    
T  46362937 aaaatgagtgtcgtttcagcgtattgcacacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttactttataaga 46363036  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtattgga 408  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||         ||||||||||||| |    
T  46363037 aaaatacaaatttaaagttgcattgtaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaa 46363136  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||    
T  46363137 aatgtaaagtgacattcattttgaaac 46363163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 44648322 - 44648484
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||||||||||||| |||||| |||| | |||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  44648322 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgc 44648421  T
Q  304 c----------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |           |  ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  44648422 ctttactttatgagaaaaaagacaaacttaaagttgaattgaaaattgtgtgagaaaaaagtt 44648484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 44854555 - 44854316
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| ||||||| |||||||||| |||||| |||||| |||||  |||  ||||||||||||||||||||  ||| |||||||||| ||    
T  44854555 atactccatccgtttcaaaatgattgtcgttttagccaattgcacatagattaatgaattgaatgaaataatcattagaca--acacttttactaaactg 44854458  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgt-gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnn 392  Q
    |||         || ||||| ||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||| |||| ||           
T  44854457 cccttactttataagaaaaatacaaacttaaagttgcattgaaaattgtactgagagaaaagttggagtatttattgagggtaaaattggaagaaaaagt 44854358  T
Q  393 gtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
     |||| |||||||| |||||||||||||| |||||||||||||    
T  44854357 -taaaattgtattgaaaatgtaaagtgacgttcattttgaaac 44854316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 2988637 - 2988761
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgt--gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||| ||        |||| |||||||||||    
T  2988637 aagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaa-ttgtattggaa 2988735  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||    
T  2988736 atgtaaagtgacattcattttgaaac 2988761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 203 - 481
Target Start/End: Original strand, 26965419 - 26965697
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||||||||| ||||||  ||||  |  | ||||| | |||||||||| |||||||||||||||| || |||||  |||||||||| ||    
T  26965419 atactccatccgttttaaaataagtgtcactttaggctttgacacacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactg 26965518  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    |||         || ||||||||||| |||||||||||||||||||||||||||||||||||| ||         |||||||||||||| ||            
T  26965519 cccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttgga---------gagggtaaagttggaagaaaaaaat 26965609  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||       |||||||||||||||||| | ||| ||| ||||||    
T  26965610 taaagttgtattgaaaatgtaaagtgacattcattttgaaacaatattttttggctaaagtgacactcattttaaaacgaatggagta 26965697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 435
Target Start/End: Complemental strand, 38457655 - 38457461
Alignment:
Q  250 aaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca---------ataaaaagacaaacttaaagttgcattgaaaatt 340  Q
    ||||||||||||  |||||||||||||||| |||||||| |||||||||| ||||           | ||||||| ||||||||| ||||||||||||||    
T  38457655 aaattaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaaatt 38457556  T
Q  341 gtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||| |||||| ||||||||||||||||||  |        ||||||||||||| ||||||||| ||| ||||||||||||||    
T  38457555 gtgtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaac 38457461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 207 - 353
Target Start/End: Original strand, 2662409 - 2662562
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc- 305  Q
    ||||||| ||||||||||||||||| ||||||| ||| |||| |  ||||  ||| |||||||||||||||||||||||||| ||||||||||||||||     
T  2662409 tccctccattttaaaatgagtgtcgctttaacccattgcacaga--ttaaagaatcaaatgaaataatcattagacataacacttttactaaattgccct 2662506  T
Q  306 --------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 353  Q
            || ||||||||||| |||||||||||||||||||||||||||||||||    
T  2662507 tattttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaa 2662562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 211 - 353
Target Start/End: Original strand, 2567931 - 2568082
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||||||||||| |||||||||| |||||| |||||| |||||| |||  |||||||||||||||||| |||||| |||||| ||| || ||         
T  2567931 tccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtccttact 2568030  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 353  Q
        || |||||||||||||||||||||||||||||||||||||||||||||    
T  2568031 ttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 2568082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 214 - 434
Target Start/End: Complemental strand, 36541724 - 36541493
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa------ttgcccaa 307  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||| |||   |  ||| || ||||||||||      ||||   |    
T  36541724 gttttaaaatgagtgtcgctttaaccaattacacatatattaaggaatgaaataaaatagtcaaatgttatagcaattttactaaaattaccttgcttta 36541625  T
Q  308 ta---aaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
    ||   | ||||||||||||||||||||| |||||||||||||  |||||||||| || ||| |||||||||||||||||| ||       ||||||||||    
T  36541624 taggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaataaagtaaagttgt 36541525  T
Q  403 attggaaatgtaaagtgacattcattttgaaa 434  Q
    |||| |||||||||  ||||||||||||||||    
T  36541524 attgaaaatgtaaaacgacattcattttgaaa 36541493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 42857008 - 42857098
Alignment:
Q  209 cctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||||||||||||||||||||||  |||||||||| | |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  42857008 cctccgttttaaaatgagtgtcgttttaggcaattacacacagattaaggaatcaaatgaaataatcattagacataacatttttactaaa 42857098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 22731124 - 22730926
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc-caat-------aaaaagacaaacttaaagttgcatt-------gaa 336  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||| |||| ||||       |||||||||||||||||||| ||||       |||    
T  22731124 attaagaaatataatgaaataatcattaaacataacatttttactaaactgcctcaatttataagaaaaagacaaacttaaagttacattttacattgaa 22731025  T
Q  337 aattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    | ||||||||||||||||||||||||| |||||| ||||||||||| ||        ||||||||||||||||||||||| ||||||||| ||| ||||    
T  22731024 atttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaac 22730926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 43169460 - 43169335
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagag--aaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||| ||||||||| | ||        ||||||||||||||||    
T  43169460 aagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaagaaaaaaattaaagttgtattggaa 43169361  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||||||||||||||||||    
T  43169360 atgtaaaatgacattcattttgaaac 43169335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 212 - 435
Target Start/End: Complemental strand, 43580712 - 43580476
Alignment:
Q  212 ccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc------ 305  Q
    ||||||||||||||| | || |||| |||||| |||| | |||||| |||  |||||||||||||||| | ||||||||||||||||| |||||          
T  43580712 ccgttttaaaatgagcgacgctttagccaattgcacacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttt 43580613  T
Q  306 -----aataaaaagacaaacttaaagttgcattgaaaattgtgtgag-agaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaag 398  Q
         |  ||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||| |||| ||||||||||||| ||         |||||    
T  43580612 tatatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaag 43580513  T
Q  399 ttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  43580512 ttgtattgaaaatgtaaagtgacatttattttgaaac 43580476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 54261659 - 54261416
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||| | ||||||||||  ||| || || |||   | ||||||| |||||||||| |     
T  54261659 atactccctccgtttcaaaatgagtgtcgctttagccaattacacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaata 54261560  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
     ||         || ||||| ||||||||||||||| ||||||||||||||||  |||||||||| |||||| |||||||||||||||||| ||          
T  54261559 accttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaa 54261460  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      |||||||| |||| |||||||||| ||| |||||||||||||    
T  54261459 attaaagttgcattgaaaatgtaaagcgacgttcattttgaaac 54261416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 309 - 429
Target Start/End: Original strand, 32303929 - 32304051
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    |||||| ||||||||||| || ||||||||||||||  ||||||||||||||||||| |||||||||||||||||| ||        |||||||||||||    
T  32303929 aaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattg 32304028  T
Q  407 gaaatgtaaagtgacattcattt 429  Q
     ||||||||||||||||||||||    
T  32304029 aaaatgtaaagtgacattcattt 32304051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 43599467 - 43599561
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc 305  Q
    ||||||||||||||||||||||||||   |||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||||| |||||    
T  43599467 tccgttttaaaatgagtgtcgttttatataattgcacataaattaaggaatgaaatgaaataatcattagacataatacttttactaaactgccc 43599561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 27027860 - 27027734
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||| | ||        |||| ||||||||||    
T  27027860 aaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattgga 27027761  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||| ||||||| ||||||||||    
T  27027760 aatgtaaattgacattaattttgaaac 27027734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 312 - 434
Target Start/End: Original strand, 25722488 - 25722612
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||| ||||||||||  | ||        ||||||||||||| ||    
T  25722488 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagtatgaagaaaaaaattaaagttgtattgaaa 25722587  T
Q  410 atgtaaagtgacattcattttgaaa 434  Q
    |||||||||||||||||||||||||    
T  25722588 atgtaaagtgacattcattttgaaa 25722612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 4476273 - 4476433
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||  |||| ||||||||||||||||||| ||||| ||||||||| | |    
T  4476273 atactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttactaact-g 4476371  T
Q  303 ccca------ataaaaag--acaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||       |||||||   | || ||||||||||||||||||||||||||||| |||||||    
T  4476372 cccttattttataaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagtt 4476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 42740464 - 42740369
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaa 298  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||  |||| ||||||||||||||||||| ||||| |||||||||    
T  42740464 atactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttactaa 42740369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 42791537 - 42791383
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||||| |||||||||||| ||||| |||||| |||  | |||||| |||| ||||||||||||||||||||||| | |||||||||||| |    
T  42791537 tactccatccgtttcaaaatgagtgtcattttagccaattgcacgcatattaaggaatgtaatgaaataatcattagacataatacttttactaaattac 42791438  T
Q  304 cc--aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||  | |  | | | ||| |||||||||||||||||||| |||||||||||||||    
T  42791437 ccttacttcataaaaaaatttaaagttgcattgaaaattatgtgagagaaaagtt 42791383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 44645467 - 44645340
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||||| |||||||||||||||||||||||| |||  |||||||||||| |||||| |||||||||||||||||| ||        |||||||| || |    
T  44645467 aaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcatgg 44645368  T
Q  407 gaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||| ||||||||||||||||    
T  44645367 gaaatgtaaagcgacattcattttgaaa 44645340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 40049115 - 40048956
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||| ||||||| |||| | | || ||||  ||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||    
T  40049115 tactccctccgttttaaaattagtgtcgctttagctatttgcacacgaattaaggaatggaatgaaataatcattagacataacacttttattaaattgc 40049016  T
Q  304 c---------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |          || ||||||||||| |||||||||||||||||||  | |||||||||||||    
T  40049015 ctttactttataagaaaaagacaaatttaaagttgcattgaaaat--tatgagagaaaagtt 40048956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 36771536 - 36771649
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||  ||||||||||| ||||||||||| |||||||||||| ||| |         || ||||||||||||||||||||||||||||||||||    
T  36771536 attaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattgaaaattgt 36771635  T
Q  343 gtgagagaaaagtt 356  Q
    ||||||||||||||    
T  36771636 gtgagagaaaagtt 36771649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 204 - 359
Target Start/End: Complemental strand, 790313 - 790149
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||| ||||| ||||||  |  | ||||| | ||||||||||| |||||||||||||||  | |||||  |||||||||| |||    
T  790313 tactccctccgttttaaaattagtgttgttttaggctttgacacacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgc 790214  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttga 359  Q
    ||         || |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  790213 ccttactttataagaaaaagtcaaaattaaagttgcattggaaattgtgtgagagaaaagtttga 790149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 430
Target Start/End: Complemental strand, 41287198 - 41287082
Alignment:
Q  316 caaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg--gagnnnnnnngtaaagttgtattggaaatgt 413  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||||||  ||         ||||||||||||||||||||    
T  41287198 caaacttaaagttgcattgaaaattgtgtgagaaaatggtttgagtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgt 41287099  T
Q  414 aaagtgacattcatttt 430  Q
    |||||||||| ||||||    
T  41287098 aaagtgacatccatttt 41287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 51381856 - 51381722
Alignment:
Q  306 aataaaaagacaaacttaaagttgcattgaaaattgtgtga----gagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagtt 400  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||| || |||||| ||| |||||||||||| | ||         |||||||    
T  51381856 aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaaaaattaaagtt 51381757  T
Q  401 gtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||| ||||||||||||||||| ||||||||||    
T  51381756 gtattgtaaatgtaaagtgacatttattttgaaac 51381722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 435
Target Start/End: Original strand, 20512406 - 20512649
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||||||||||||||||| ||||  ||||| |||| | ||||||||||  ||| ||||| |||   | |||| || |||||||||| |      
T  20512406 tactccctccgttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataa 20512505  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnn 391  Q
    ||         || ||||| ||||||||||||||| ||||||||||||||  |||||||||||| |||||| |||||| ||||||||||| ||           
T  20512506 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaa 20512605  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      |||||||| |||| |||||||||| |||||||||||||||||    
T  20512606 tttaaagttgcattgaaaatgtaaagcgacattcattttgaaac 20512649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 53716245 - 53716085
Alignment:
Q  204 tactccctccgtttt-aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||| |||||||| ||||||||||||| ||||  |  | ||||||||||||||||||||||||||||||||||| || |||||  |||||||||| ||    
T  53716245 tactccatccgttttcaaaatgagtgtcgctttagactttgacacataaattaagaaatgaaatgaaataatcattggatataacgcttttactaaactg 53716146  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    | |         || ||||||||||  |||||||||||||||||| |||||||||||||||||    
T  53716145 ctcttactttataagaaaaagacaa--ttaaagttgcattgaaaactgtgtgagagaaaagtt 53716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 209 - 430
Target Start/End: Original strand, 1340848 - 1341067
Alignment:
Q  209 cctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc--- 305  Q
    ||||||||| ||||||| |  ||||||| | |||| |||||| |||||  |||| ||||||||||| ||||||||||||| |||| ||||| || |        
T  1340848 cctccgtttcaaaatgaat--cgttttagcaaattgcacatagattaaagaatggaatgaaataataattagacataacactttttctaaagtgtcttta 1340945  T
Q  306 ------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagt 399  Q
          || |||||||||||||||||||||||||||||||||||||||||||||||| ||         |||||||| ||||| ||        ||||||    
T  1340946 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttgga---------gagggtaacgttggaagaaaaaaattaaagt 1341036  T
Q  400 tgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||| |||||||||||||||||||||||    
T  1341037 tgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 312 - 431
Target Start/End: Original strand, 43687910 - 43688034
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggag---nnnnnnngtaaagttgtattg 406  Q
    |||||||| |||||||| |||||||||||||||  |||||||||||| |||||| |||||||||||||||||| ||           |||||||||||||    
T  43687910 aagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaaaattaaagttgtattg 43688009  T
Q  407 gaaatgtaaagtgacattcattttg 431  Q
    |||||||||||||||||| ||||||    
T  43688010 gaaatgtaaagtgacatttattttg 43688034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 5244777 - 5244639
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgcc--------caataaaaagacaaacttaaagttgcattgaaaattgtg 343  Q
    ||||||||||  ||||||||||||||||||||||||| ||||| |||| |  |         || ||||| |||||||||||||||||||||||||  ||    
T  5244777 attaagaaattgaatgaaataatcattagacataacacttttattaaagtctctttacttataagaaaaaaacaaacttaaagttgcattgaaaataatg 5244678  T
Q  344 tgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    |||||||||| || |||||| ||||||||||||||||||    
T  5244677 tgagagaaaaattagagtatttattgagggtaaagttgg 5244639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 252 - 434
Target Start/End: Complemental strand, 22414946 - 22414757
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca------ataa--aaagacaaacttaaagttgcattgaaaattgtg 343  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| |||| | || |      ||||  ||||| |||||||||||||||||||||||||||    
T  22414946 attaagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataagaaaagagaaacttaaagttgcattgaaaattgtg 22414847  T
Q  344 tgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    | ||||  ||| |||||||| |||||| ||||||||||| ||         ||||||| ||||  |||||||||||||||||||||||||||    
T  22414846 taagag--aaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 220 - 381
Target Start/End: Complemental strand, 27039551 - 27039382
Alignment:
Q  220 aaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----------aata 309  Q
    ||||| |||||||||||||||||| |||| | |||||| |||| |||||||  ||||||| | |||||| |||||||||| || ||          || |    
T  27039551 aaatgggtgtcgttttaaccaattgcacacatattaagtaatggaatgaaa--atcattaaatataacacttttactaaagtgtccttactttataaaaa 27039454  T
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg 381  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||| ||  ||||||||    
T  27039453 aaaagacaaatttaaagttgcattgaaaattgtgtgagaggaaagttggagtatttattaagaataaagttg 27039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 435
Target Start/End: Complemental strand, 19552732 - 19552541
Alignment:
Q  245 cacataaattaagaaatgaaatgaaataatcattagacataacattttt-actaaattgccc---------aataaaaagacaaacttaaagttgcattg 334  Q
    |||| ||||||||||||||||||||||||||||| || ||||| ||||| |||||| || ||         || ||||| ||||| ||||||||||||||    
T  19552732 cacacaaattaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattg 19552633  T
Q  335 aaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||| ||||||||||||||| ||         |||||||||||||| ||        ||||||||||||| ||||||||||||||||||||||| |||    
T  19552632 aaaattctgtgagagaaaagttaga---------gagggtaaagttggaagaaaaaatttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 19552542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 43736783 - 43736877
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    |||||| ||||||| ||||||||||||| |||| |||||| |||| ||||| ||  |||||||||||||||||||||| |||||| ||||||||||    
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcaca-aaatttagggatgaaatgaaataatcattagatataacacttttactaaa 43736877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 218 - 356
Target Start/End: Original strand, 38165587 - 38165738
Alignment:
Q  218 taaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aat 308  Q
    |||||||||||||||||||  ||||| || | | |||||| |||| |||||||||||||||| |||||||| |||||||||| || ||         ||     
T  38165587 taaaatgagtgtcgttttagtcaattgcatacagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataag 38165686  T
Q  309 aaaaagacaaacttaaagttgcat----tgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||||||||||    || |||||||||||||||||||||    
T  38165687 aaaaagacaaacttaaagttgcattggatggaaattgtgtgagagaaaagtt 38165738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 35239538 - 35239441
Alignment:
Q  268 aaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||| |||||||||||||||||| || ||         || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35239538 aaataatcattaggcataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagagaaaagtt 35239441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 49470915 - 49470790
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||| |||||| ||||| || |||| ||||  |        ||||||||||||| ||    
T  49470915 aagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaattaaagttgtattgaaa 49470816  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    |||||||  |||||||||||||||||    
T  49470815 atgtaaaacgacattcattttgaaac 49470790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 254 - 434
Target Start/End: Original strand, 43600152 - 43600341
Alignment:
Q  254 taagaaatgaaatgaaataatcattagacataacatttttactaaattgccc-----------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||| | |||           || |||| |||||| ||||||||  |||| |||||||    
T  43600152 taagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaattgt 43600251  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    |||||||||||| | |||||| |||||||||||||||||| ||        |||| |||||||| ||||||||||| ||||| |||||||||    
T  43600252 gtgagagaaaag-tagagtatttattgagggtaaagttggaagaaaaaat-taaaattgtattgaaaatgtaaagtaacatttattttgaaa 43600341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 43599856 - 43599903
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43599856 aaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagtt 43599903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 50420379 - 50420312
Alignment:
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||| ||||||  ||||||||||    
T  50420379 acaaacttaaagttgcattgaaaattgcgcgagagaaaagttagagtatttattgaaagtaaagttgg 50420312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 3152716 - 3152778
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| | |||||| ||||||||    
T  3152716 tactccctctgttttaaaatgagtgtcgttttaaccaattgcacacatattaaggaatgaaat 3152778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 51398252 - 51398179
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatca 276  Q
    ||||||||||||||| ||||||||||||| |||| |||||| |||| | ||||||||||||||| || ||||||    
T  51398252 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatca 51398179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 53560793 - 53560718
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaat--tgtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    |||||||||| ||||||||||||||||||||  |||| ||||||||||||||||| | ||| |||| |||||||||    
T  53560793 aaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaagttgg 53560718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 6084779 - 6084834
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  6084779 acacacaaattaaaaaatgaaatgaaataatcattagacattacatttttattaaa 6084834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 42007089 - 42007159
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtg--agagaaaagtttgagtatctattgagggtaaagtt 380  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||||||||| |||| ||| |||||||    
T  42007089 aagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtt 42007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 38277993 - 38277931
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||||||| |||||||||||||||||||||| |||||| |||  |||||||| ||||||||    
T  38277993 tactccctccattttaaaatgagtgtcgttttagccaattgcactcaaattaaggaatgaaat 38277931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 45095771 - 45095669
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataaca-tttttactaaattg 302  Q
    |||||||||||||| ||||||| ||||| |||| | |||| |||  | |||||| |||| |||||||||||||||| ||||||||  |||||||||| ||    
T  45095771 tactccctccgtttcaaaatgattgtcgctttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacacattttactaaaatg 45095672  T
Q  303 ccc 305  Q
    |||    
T  45095671 ccc 45095669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 51482177 - 51482115
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| || |||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  51482177 tactccttctgttttaaaatgagtgtcgttttaaacaattacacacagattaaggaatgaaat 51482115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 790138 - 790097
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  790138 taaagttgtattggaaatgtaaagtgacattaattttgaaac 790097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 13485916 - 13485957
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  13485916 taaagttgtattggaaatgtaaattgacattcattttgaaac 13485957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 44648512 - 44648553
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  44648512 taaagttgtattggaaatgtaaagtgacattcattttaaaac 44648553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 30186415 - 30186373
Alignment:
Q  205 actccctccgttttaaaatgagtgtcgttttaaccaattacac 247  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  30186415 actctctccgttttaaaatgagtgtcgttttagccaattacac 30186373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 432
Target Start/End: Complemental strand, 35239428 - 35239390
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttga 432  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35239428 taaagttgtattagaaatgtaaagtgacattcattttga 35239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 41287404 - 41287458
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaag 257  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||| | ||||||    
T  41287404 atactccctccgtttcaaaatgagtgtcgctttagccaattacacacatattaag 41287458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 47895253 - 47895315
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||| ||||||||||||||||||||||| |||| |||||| |||| | |||||| ||||||||    
T  47895253 tacttcctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 47895315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 36771678 - 36771719
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  36771678 taaagttgtattgtaaatgtaaagtgacattcattttaaaac 36771719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 42886980 - 42886947
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||||||    
T  42886980 atactccctccgttttaaaatgagtgtcgtttta 42886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 53716071 - 53716030
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  53716071 taaagttgtattggaaatgtaaagtaacattcattttaaaac 53716030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 27027960 - 27027883
Alignment:
Q  220 aaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    |||| ||||||||||||||||||| |||| | |||||| |||| ||||||  |||||||| |||||||| ||||| ||||    
T  27027960 aaataagtgtcgttttaaccaattgcacacatattaagtaatggaatgaa--aatcattaaacataacacttttaataaa 27027883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 34059992 - 34059947
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  34059992 aaaaagacaa--ttaaagttgcattgaaaattgtgcgagagaaaagtt 34059947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 37225793 - 37225761
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||||||||    
T  37225793 tactccctccgttttaaaatgagtgtcgtttta 37225761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 42740339 - 42740303
Alignment:
Q  320 cttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42740339 cttaaagttgcattgaaaattgtgtgagaaaaaagtt 42740303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 45095595 - 45095559
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45095595 taaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 31853472 - 31853539
Alignment:
Q  205 actccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||||||| ||||||||||| ||||| ||||||||||| ||| || |||||  |||||||| |||||    
T  31853472 actccctccattttaaaatgaatgtcgctttaaccaattgcacttagattaaagaatgaaataaaata 31853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 238
Target Start/End: Complemental strand, 36844935 - 36844904
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaac 238  Q
    ||||||||||||||||||||||||||||||||    
T  36844935 tccctccgttttaaaatgagtgtcgttttaac 36844904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 38364032 - 38363993
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  38364032 tactctctccgttttaaaatgagtgtcgttttagccaatt 38363993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 45213630 - 45213693
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||  ||||||||||||||||| |||| |||||| |||| | |||||| ||||||||    
T  45213630 atactccctctattttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaat 45213693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 50646307 - 50646272
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaac 238  Q
    ||||||| ||||||||||||||||||||||||||||    
T  50646307 atactccttccgttttaaaatgagtgtcgttttaac 50646272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 20512695 - 20512657
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  20512695 atactccctccgtttcaaaatgagtgtcgttttagccaa 20512657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 30431360 - 30431299
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||||||| |||| | || || |||||| |||||| ||||||||    
T  30431360 tactccctccgttttaaaatgagtgtcatttt-agcagttgcacatagattaaggaatgaaat 30431299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 424
Target Start/End: Original strand, 38165753 - 38165783
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacatt 424  Q
    |||||||||||||||||||||||||||||||    
T  38165753 taaagttgtattggaaatgtaaagtgacatt 38165783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 51397963 - 51398001
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  51397963 atactccatccgttttaaaatgagtgtcgttttagccaa 51398001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 53560907 - 53560845
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||| |||||||||||||| |||||||||||| ||||||||| | | |||||| ||| ||||    
T  53560907 tactctctccgttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaat 53560845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 54261369 - 54261407
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  54261369 atactccctccgtttcaaaatgagtgtcgttttagccaa 54261407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 2568114 - 2568155
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||    
T  2568114 taaagttgtattgaaaatgtaaagtaacattcattttaaaac 2568155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 4759521 - 4759488
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||| ||||||||||||||||||||||    
T  4759521 atactccctccattttaaaatgagtgtcgtttta 4759488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 9167661 - 9167702
Alignment:
Q  264 aatgaaataatcattagacataacatttttactaaattgccc 305  Q
    |||||||||||||||  ||||||||||||||||||| |||||    
T  9167661 aatgaaataatcatttcacataacatttttactaaactgccc 9167702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 34059918 - 34059877
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  34059918 taaagttgtattgaaaatgtaaaatgacattcattttaaaac 34059877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 45567030 - 45566985
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaa 256  Q
    |||||||||||||||||||| ||||| |||||| |||||| |||||    
T  45567030 tccgttttaaaatgagtgtcattttagccaattgcacatagattaa 45566985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 49471016 - 49470963
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaa 256  Q
    |||||| |||||||||||||||||| |||||||||  |||| |||| |||||||    
T  49471016 atactctctccgttttaaaatgagtatcgttttaaataattgcacacaaattaa 49470963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 3153001 - 3152969
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||| |||||    
T  3153001 tactccctccgttttaaaatgagtgtcatttta 3152969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 4392150 - 4392182
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||| ||||||||||||||||||||||||||||    
T  4392150 tactacctccgttttaaaatgagtgtcgtttta 4392182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 30186328 - 30186360
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  30186328 tactccatccgttttaaaatgagtgtcgtttta 30186360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 31291075 - 31291111
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||||||| |||||||||||||| |||||||||    
T  31291075 taaagttgtattagaaatgtaaagtgatattcatttt 31291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 32492374 - 32492342
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  32492374 tactccctccgtttcaaaatgagtgtcgtttta 32492342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 33194226 - 33194194
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||| ||||||||||||||||||||||    
T  33194226 tactccctccattttaaaatgagtgtcgtttta 33194194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 35557954 - 35557922
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||| ||||    
T  35557954 tactccctccgttttaaaatgagtgtcgattta 35557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 43169289 - 43169321
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||| ||||    
T  43169289 tactccctccgttttaaaatgagtgtcgcttta 43169321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 44648599 - 44648567
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  44648599 tactccctccgtttcaaaatgagtgtcgtttta 44648567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 45213916 - 45213884
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||| ||||||||||||||||||||||||||||    
T  45213916 tacttcctccgttttaaaatgagtgtcgtttta 45213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 52222762 - 52222806
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||||||||| ||||| |||||||||||| |||||| ||||    
T  52222762 tactccctccgtttcaaaattagtgtcgttttagccaattgcaca 52222806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 1e-64; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 203 - 470
Target Start/End: Complemental strand, 30627323 - 30627057
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||| ||||||||||||||||||||||||||||   |||| |||| |||||||  ||||||||||||||||||||||| |||||| |||||||||| ||    
T  30627323 atacttcctccgttttaaaatgagtgtcgttttagataattgcacacaaattaatgaatgaaatgaaataatcattagatataacacttttactaaagtg 30627224  T
Q  303 cccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
     |||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||        |||||||||    
T  30627223 tccaagaaaaaaacaaatttaaagttgcattgaaaattgtttgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgt 30627124  T
Q  403 attggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaa 470  Q
    |||| |||| |||||||||||| |||||||||| | |       ||||||||||||||||||||||||    
T  30627123 attgaaaatataaagtgacatttattttgaaac-aaattttttagctaaagtgacactcattatgaaa 30627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 12828591 - 12828833
Alignment:
Q  203 atactccctccgtttt-aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||||||||||| | |||||||| |||||| || |||||| |||| |||||||  |||||||||||||||||||||||||||||| |||||||||| |    
T  12828591 atactccctccgttctcaaaatgagcgtcgttgtagccaattgcacacaaattaatgaatgaaatgaaataatcattagacataacacttttactaaact 12828690  T
Q  302 gccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnn 392  Q
    ||||         || |||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||           
T  12828691 gcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaa 12828790  T
Q  393 gtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
     ||||||||||||||||||||||||||| ||||||||||||||    
T  12828791 ttaaagttgtattggaaatgtaaagtgaaattcattttgaaac 12828833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 219 - 435
Target Start/End: Complemental strand, 8052560 - 8052345
Alignment:
Q  219 aaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaaagacaa 318  Q
    ||||||| ||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||   ||||||||    
T  8052560 aaaatgaatgtcgttttagtcaattgcacacaaattaagaaatgaaatgaaataatcattagacataacacttttattaaaatgctcaagtgaaagacaa 8052461  T
Q  319 acttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagt 418  Q
    || |||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||| |||||||        |||||||||||| ||||| ||||||    
T  8052460 acctaaagttgcattgaaaattgtgggagagaatagttggagtatttattgagggtaaaattgggagaaaaaat-taaagttgtattagaaatataaagt 8052362  T
Q  419 gacattcattttgaaac 435  Q
    |||||||||||| ||||    
T  8052361 gacattcattttaaaac 8052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 204 - 435
Target Start/End: Original strand, 31275553 - 31275794
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||| ||||| |||||| |||||| |||| | |||||| || |||||||||||| |||||||| ||||| |||||| ||| |||    
T  31275553 tactccctccgtttcaaaataagtgttgttttagccaattgcacacagattaaggaaagaaatgaaataaccattagacgtaacacttttaccaaactgc 31275652  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnng 393  Q
    ||         |  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||             
T  31275653 ccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaat 31275752  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31275753 taaagttgtattggaaatgtaaagtgacattcattttgaaac 31275794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 202 - 435
Target Start/End: Original strand, 34439318 - 34439565
Alignment:
Q  202 gatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||||| ||||||||||||||||||||||||||     | |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  34439318 gatactccttccgttttaaaatgagtgtcgttttaggtgttgacacataaattaagaaatgaaatgaaataatcattagatataacatttttattaaatt 34439417  T
Q  302 gccc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgag-----agaaaagtttgagtatctattgagggtaaagttgggagn 386  Q
    ||||          || |||||||||||| ||||||||||||| ||||||||| ||     ||||||||| |||||| |||||| ||||||||||| ||     
T  34439418 gccctttattttataagaaaaagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaaga 34439517  T
Q  387 nnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
          | |||||||||||||||||||||| ||||||||||||||||||    
T  34439518 aagaatg-aaagttgtattggaaatgtaaaatgacattcattttgaaac 34439565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 23936494 - 23936734
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||||||||||||||||||||||     |   ||| | ||||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  23936494 atactccctccgttttaaaatgagtgtcgttttaggtgttgggacacatattaagaaatggaatgaaataatcattagatataacatttttactgaattg 23936593  T
Q  303 ccc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnn 392  Q
    |||          || ||||| ||||| |||||||||||||||||||||||  ||||||| ||| |||||| |||||||||||||||||| ||           
T  23936594 ccctttactttataagaaaaaaacaaatttaaagttgcattgaaaattgtg--agagaaaggttggagtatatattgagggtaaagttggaagaaaaaaa 23936691  T
Q  393 gtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      ||||||| |||| ||||||||||| ||||||||||||||||    
T  23936692 tgaaagttgcattgaaaatgtaaagtaacattcattttgaaac 23936734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 29915784 - 29915541
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||| ||||||| ||| ||||||     |  |||| | ||||||||||  ||||||||||| |||||| |||||| |||||||||| ||    
T  29915784 atactccctccgtttcaaaatgaatgttgttttaggtgttggcacacatattaagaaattgaatgaaataataattagaaataacacttttactaaactg 29915685  T
Q  303 ccc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnn 391  Q
    ||           || |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||           
T  29915684 ccatttactttataagaaaaagacaaacataaagttgcattggaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 29915585  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      ||||||||||||||||||||||||||||||||||||||||||    
T  29915584 attaaagttgtattggaaatgtaaagtgacattcattttgaaac 29915541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 207 - 432
Target Start/End: Original strand, 26669013 - 26669247
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc- 305  Q
    ||||||||||||||||||||||||| ||||  |  |  |||| | ||||||||||  ||||||||||| ||| || ||||| |||||||||||||||||     
T  26669013 tccctccgttttaaaatgagtgtcgctttaggctttagcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgccct 26669112  T
Q  306 --------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaa 397  Q
            || ||||||||||| |||||||||||||||||||| ||||||||||||||| |||  | |||||||| |||||||||  |        ||||    
T  26669113 tactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaa 26669212  T
Q  398 gttgtattggaaatgtaaagtgacattcattttga 432  Q
    |||||||||||||| ||||||||||||||||||||    
T  26669213 gttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 29927334 - 29927207
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtattgg 407  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||| |||||| |||||||||||||||||| ||         ||||||||||||||    
T  29927334 aaaaagacaaacttaaagttgcattgaaaactacatgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgg 29927235  T
Q  408 aaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||    
T  29927234 aaatgtaaagtgacattcattttgaaac 29927207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 11785129 - 11785253
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||||||| ||        |||||||||||||||    
T  11785129 aaaaagataaatttaaagttgtattgaaaattgtgtgagagaaaagttagaatatttattgagggtaaagttggaagaaaaaat-taaagttgtattgga 11785227  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||| ||||||||||||    
T  11785228 aatgtaaagtgaca-tcattttgaaac 11785253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 17345163 - 17345288
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||| ||        |||||||||||| |||    
T  17345163 aagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaatattaaagttgtattagaa 17345262  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| ||||||||| ||||    
T  17345263 atgtaaagtgatattcattttaaaac 17345288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 4123883 - 4124007
Alignment:
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||  ||        ||||||||||||  ||    
T  4123883 aaaaaacaaacttaaa-ttgcattgaaaattgtgtgaaagaaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaa 4123981  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||    
T  4123982 atgtaaagtgacattcattttgaaac 4124007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 34576669 - 34576544
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||  ||||| |||||||| ||||||||| ||        ||||||||||||||||    
T  34576669 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaagaaaaaaattaaagttgtattggaa 34576570  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||| ||| ||||||||| ||||    
T  34576569 atgtaaaatgatattcattttaaaac 34576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 26189636 - 26189508
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattg--tgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||| || |||||| |||||||||||||||||| ||        |||||||| ||||    
T  26189636 aaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaatattaaagttgcattg 26189537  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||   ||||||||||||||||    
T  26189536 gaaatgtaaaacaacattcattttgaaac 26189508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 32258953 - 32258722
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||| |||||||||||||||||||| ||||  |  | ||||| | ||||||||||  | ||||||||||||| || |||||  |||||||||| |||    
T  32258953 tactcccaccgttttaaaatgagtgtcgctttaggctttgacacacagattaagaaatcgattgaaataatcattggatataacgcttttactaaactgc 32258854  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa-gtttgagtatctattg-agggtaaagttgggagnnnnnnngtaaagttg 401  Q
    ||  |      | ||| ||||||||||||||||||||||||||||||||| ||| |||||| | ||  ||| ||||||||| ||        ||||||||    
T  32258853 cc--ttgctttataaaattaaagttgcattgaaaattgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttg 32258756  T
Q  402 tattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||| ||||||||||||||||||||||||||||    
T  32258755 tattgaaaatgtaaagtgacattcattttgaaac 32258722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 10494788 - 10494914
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| || ||| ||||  ||| |||||||  ||        |||||||| ||||||    
T  10494788 aaaaagacaaactttaagttgcattgaaaattgtatgagagaaaagttggactatttattttgggcaaagttgaaagaaaaaaattaaagttgaattgga 10494887  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||| ||||||||||||| ||||    
T  10494888 aatgtaaactgacattcattttaaaac 10494914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 25932754 - 25932684
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagag--aaaagtttgagtatctattgagggtaaagtt 380  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||||| |||||||    
T  25932754 aagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaagtt 25932684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 6140715 - 6140600
Alignment:
Q  321 ttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagt 418  Q
    ||||| ||||||||||||||||||  ||||||||||||| ||||| |||||| ||||||||||| ||        |||||||| |||||||||||||||     
T  6140715 ttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaagaaaaaat-taaagttgaattggaaatgtaaagc 6140617  T
Q  419 gacattcattttgaaac 435  Q
    |||||||||||| ||||    
T  6140616 gacattcattttaaaac 6140600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 6143200 - 6143084
Alignment:
Q  321 ttaaagttgcattgaaaattgtgtgagagaaaa--gtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagt 418  Q
    ||||| ||||||| |||||||||| ||||||||  |||| ||||| |||||| ||||||||||| ||        |||||||| |||||||||||||| |    
T  6143200 ttaaaattgcattaaaaattgtgtaagagaaaaaagtttaagtatttattgaaggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaat 6143101  T
Q  419 gacattcattttgaaac 435  Q
    |||||||||||| ||||    
T  6143100 gacattcattttaaaac 6143084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 1924701 - 1924747
Alignment:
Q  310 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1924701 aaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 1924747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 24163624 - 24163694
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacata-aattaagaaatgaaatgaaata 272  Q
    ||||||| ||||||||||| |||||||||||||| |||||| |||| | |||||||||||||||| |||||    
T  24163624 atactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataaaata 24163694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 19689874 - 19689986
Alignment:
Q  321 ttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtga 420  Q
    ||||||||| ||||| |||||||||||||||||||| |||||| | || ||  ||||||||| ||        |||||||||||| |||||||||||| |    
T  19689874 ttaaagttgtattgacaattgtgtgagagaaaagttggagtatttttttagattaaagttggaagaaaata--taaagttgtattagaaatgtaaagtaa 19689971  T
Q  421 cattcattttgaaac 435  Q
    |||||||||| ||||    
T  19689972 cattcattttaaaac 19689986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 10520301 - 10520364
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||||||||||| |||||||||||||| |||||||||||  ||| | |||||| ||||||||    
T  10520301 atactccctccgttgtaaaatgagtgtcgctttaaccaattgtacacatattaaggaatgaaat 10520364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 25932864 - 25932809
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||| |||||||||||| |||||||||||   |||||||||||||||    
T  25932864 tccgttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaat 25932809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 432
Target Start/End: Complemental strand, 3015957 - 3015919
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttga 432  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  3015957 taaagttgtattgaaaatgtaaagtgacattcattttga 3015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 234266 - 234222
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||||    
T  234266 tactcccttcgtttcaaaatgagtgtcgttttaaccaattgcaca 234222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 350 - 435
Target Start/End: Original strand, 4132042 - 4132127
Alignment:
Q  350 aaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| |||||| |||||||||||||||||  ||        ||||||||||||  ||||||||||||||||||||||| ||||    
T  4132042 aaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaac 4132127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 363
Target Start/End: Original strand, 4131908 - 4132025
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca------ataa-aaagacaaacttaaagttgcattgaaaattgtgt 344  Q
    |||||||||| |||| |||||||||||| | ||||||||||||||||| | ||        |||| ||| | ||||||||| ||||||||||||||||||    
T  4131908 attaagaaataaaattaaataatcattatatataacatttttactaaactacctttattttataagaaaaaaaaacttaaa-ttgcattgaaaattgtgt 4132006  T
Q  345 gagagaaaagtttgagtat 363  Q
    || ||||||||| ||||||    
T  4132007 gaaagaaaagttggagtat 4132025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 29927449 - 29927354
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaa 298  Q
    ||||||||||||||| | ||||| |||||||| |     | ||||| | ||||| ||||  ||||||||||||||||||||||||| |||||||||    
T  29927449 atactccctccgtttcacaatgaatgtcgtttaagattttgacacacagattaaaaaatagaatgaaataatcattagacataacacttttactaa 29927354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 17246805 - 17246767
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  17246805 atactccctccgtttcaaaatgagtgtcgttttagccaa 17246767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 24163913 - 24163875
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  24163913 atactccctccgttttaaaatgagtgtcattttagccaa 24163875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 32429239 - 32429277
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  32429239 atactccatccgttttaaaatgagtgtcgttttagccaa 32429277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 1924632 - 1924681
Alignment:
Q  250 aaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||||||  ||||||||||||||| || ||||| |||||||||||    
T  1924632 aaattaagaaatataatgaaataatcattggatataacgtttttactaaa 1924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 1924775 - 1924816
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  1924775 taaagttgtattgaaaatgtaaaatgacattcattttaaaac 1924816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 10540708 - 10540675
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||| ||||||||||||||||||||||||||||    
T  10540708 atacttcctccgttttaaaatgagtgtcgtttta 10540675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 19689809 - 19689854
Alignment:
Q  254 taagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||| ||||||||||| |||||| |||||| ||||||||||    
T  19689809 taagaaatggaatgaaataattattagatataacaattttactaaa 19689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 577304 - 577244
Alignment:
Q  202 gatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||||| | ||||||||||||| |  |||||||||||||||| |||| | |||||||||||    
T  577304 gatacttcttccgttttaaaataaacgtcgttttaaccaattgcacacagattaagaaatg 577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 17345049 - 17345089
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    ||||||||||| ||||||||||||||||| |||| ||||||    
T  17345049 atactccctccattttaaaatgagtgtcgctttagccaatt 17345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 407 - 435
Target Start/End: Complemental strand, 19416887 - 19416859
Alignment:
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||||    
T  19416887 gaaatgtaaagtgacattcattttgaaac 19416859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 29399900 - 29399932
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  29399900 tactccctccgtttcaaaatgagtgtcgtttta 29399932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 34519324 - 34519292
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  34519324 tactccatccgttttaaaatgagtgtcgtttta 34519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 5e-64; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 204 - 428
Target Start/End: Complemental strand, 30492957 - 30492732
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||| |||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||||| ||||||| || |||    
T  30492957 tactccctccgtttcaaaatgagtgtggttttagccaattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactgaactgc 30492858  T
Q  304 ccaataaaaagacaaacttaaagttgcatt-gaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgt 402  Q
    |||| |||||||||||||||||||||||||  |||||||||  ||||||||||| |||||| |||||||||||||||||||||        |||||||||    
T  30492857 ccaagaaaaagacaaacttaaagttgcattaaaaaattgtgcaagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgt 30492758  T
Q  403 attggaaatgtaaagtgacattcatt 428  Q
    |||| |||||||||||||||||||||    
T  30492757 attgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 198 - 430
Target Start/End: Complemental strand, 31987538 - 31987306
Alignment:
Q  198 atatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttacta 297  Q
    |||| ||| ||| ||||||||||||||||||||||||||   |||| || | ||||||| |||| ||||||||||||||||||| |||||| ||||||||    
T  31987538 atatcataatccatccgttttaaaatgagtgtcgttttagttaattgcatacaaattaaaaaataaaatgaaataatcattagagataacacttttacta 31987439  T
Q  298 aattgcccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaa 397  Q
    || |||  || ||||||||||| |||||||||||||||||||| || |||||||||||| |||||| |||||||||||||||||| ||        ||||    
T  31987438 aactgctgaagaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaa 31987339  T
Q  398 gttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||| ||||||||||||||||||||||||    
T  31987338 gttgtattagaaatgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 204 - 481
Target Start/End: Complemental strand, 29840292 - 29840026
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||||||||||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||||| |||||||||| |||    
T  29840292 tactccctccgtttcaaaatgagtgtcgttttacccaattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaaatgc 29840193  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgt 402  Q
     ||| ||||||||||||||||||            ||||| |||||||||||| |||||| |||||||||||||||||||||         |||||||||    
T  29840192 tcaagaaaaagacaaacttaaag------------ttgtgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgt 29840105  T
Q  403 attggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagta 481  Q
    ||||||||||||||||||||||||||||||||| ||        |||||||||||| ||||| ||||| | ||||||||    
T  29840104 attggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacagtcattttgaaacggagggagta 29840026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 211 - 435
Target Start/End: Complemental strand, 54092179 - 54091955
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataa 310  Q
    ||||||||||||||||||||||||||| ||||| || | |||||||| |||||||||||||| |||||| |||||| | |||||| ||||||||||| ||    
T  54092179 tccgttttaaaatgagtgtcgttttaatcaattgcatacaaattaaggaatgaaatgaaatagtcattaaacataatacttttaccaaattgcccaagaa 54092080  T
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaa 410  Q
    ||||||||||||||| ||| |||||||||| || |||||||||||| |||||| ||||||||||||||||| |||        ||||||||||||  |||    
T  54092079 aaagacaaacttaaaattgtattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattaaaaa 54091980  T
Q  411 tgtaaagtgacattcattttgaaac 435  Q
    | |||| ||||||||||||| ||||    
T  54091979 tctaaattgacattcattttaaaac 54091955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 206 - 381
Target Start/End: Complemental strand, 34096251 - 34096067
Alignment:
Q  206 ctccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc 305  Q
    |||| |||||||||| |||||||||||||||  ||||| |||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34096251 ctccatccgttttaagatgagtgtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgccc 34096152  T
Q  306 ---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg 381  Q
             || |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  34096151 ttactttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgagagaaaagtttgaatatttattgagggtaaagttg 34096067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 204 - 385
Target Start/End: Complemental strand, 45049936 - 45049756
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||| ||| ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| ||||  |||    
T  45049936 tactcgctcagttttaaaatgagtgacgttttaatcaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttcctaagctgc 45049837  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag 385  Q
    |||| ||||| ||||||||||||||||||||||||||||| || ||||||||  |||||  ||||||| |||||||| ||||    
T  45049836 ccaa-aaaaatacaaacttaaagttgcattgaaaattgtgcgaaagaaaagtaggagtacttattgagagtaaagttcggag 45049756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 215 - 435
Target Start/End: Complemental strand, 30022293 - 30022065
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc--------a 306  Q
    |||||||||||||||||||||| | |||| |||||| |||||| |||||||| |||||||||||| | |||||| |||||||||| | ||         |    
T  30022293 ttttaaaatgagtgtcgttttagcaaattgcacatagattaaggaatgaaataaaataatcattatatataacacttttactaaactaccttcttgtata 30022194  T
Q  307 ataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||        |||||||||||||    
T  30022193 agaaaaagacaaactcaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattg 30022094  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| |||| ||||||||||||||||    
T  30022093 gaaatgtcaagtaacattcattttgaaac 30022065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 38692618 - 38692466
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| ||||||||||| ||| ||| |||||| |||||| || |||||||||| ||||||||||||||||||| | | |||||| |||||||||| | |    
T  38692618 tactccttccgttttaaagtgaatgttgttttagccaattgcatataaattaaggaatgaaatgaaataatcatcaaagataacacttttactaaaatac 38692519  T
Q  304 ccaataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  38692518 ccaagaaaaagacaaaattaaagttgcattgaaaattgtgcgagagaaaagtt 38692466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 19849273 - 19849081
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||| |||||         || ||||| ||||||||||||||||||||||||||||    
T  19849273 attaagaaatgaaataaaataattattacatataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgt 19849174  T
Q  343 gtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||| |||||| |||||||||||||||||| ||        |||||||||||||||| |||||||||| ||||||||| ||||    
T  19849173 gtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaac 19849081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 22212578 - 22212338
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| |||||||||||||| |||||| |||| ||||||  ||| | |||||| |||||||||||||||||||||||||||||| |||||| ||| |||    
T  22212578 tactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactgc 22212479  T
Q  304 c---------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngt 394  Q
    |          |  |||||  |||||||||||||| |||||||||||||||||| ||| ||| |||||| |||||||||||||||||| ||        |    
T  22212478 ctttgttttatataaaaaactcaaacttaaagttgtattgaaaattgtgtgagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaatt 22212379  T
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||| |||||||||||||| |||||||||||||| ||||    
T  22212378 aaagttatattggaaatgtaaggtgacattcattttaaaac 22212338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 211 - 435
Target Start/End: Complemental strand, 24259843 - 24259608
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----- 305  Q
    ||||||||||||||||||||| |||| |||||| |||||| |||||| |||||||| || || |||   | ||||||| |||||||||| |  ||         
T  24259843 tccgttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataaccttact 24259744  T
Q  306 ----aataaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagt 399  Q
        || |||| |||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||||| ||        ||||||    
T  24259743 ttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagt 24259644  T
Q  400 tgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    || |||||||||||||||||||||||||||||||||    
T  24259643 tgcattggaaatgtaaagtgacattcattttgaaac 24259608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 17499629 - 17499872
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||| | |||||  |||||||| ||||| |||   | ||||||| |||||||||| |     
T  17499629 atactctctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaata 17499728  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattg--tgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
     |          || |||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||| ||          
T  17499729 acattactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaa 17499828  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      |||| ||| ||||||||||||||| |||||||||||||||||    
T  17499829 attaaaattgcattggaaatgtaaagcgacattcattttgaaac 17499872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 259 - 435
Target Start/End: Complemental strand, 37445842 - 37445657
Alignment:
Q  259 aatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagag 349  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||         || ||||||||||| ||||||||||||| |||||| ||||| ||    
T  37445842 aatgaaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaag 37445743  T
Q  350 aaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||| ||||| ||| |||||||||||||||||| ||        ||||||||||||  ||||||||| ||||||||||||| ||||    
T  37445742 aaaaatttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaac 37445657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 203 - 361
Target Start/End: Original strand, 36805365 - 36805531
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| || ||||||||||||||||||||||| | |||| |||| | |||||| |||||||||||||||||||||||||||||| |||||||||| ||    
T  36805365 atactccttctgttttaaaatgagtgtcgtttta-ctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactg 36805463  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagt 361  Q
     ||         |  ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  36805464 tccttagtttatatgaaaaagacaaacttaaagttgtattgaaaattgtgtgagaaaaaagttggagt 36805531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 247 - 430
Target Start/End: Original strand, 45520416 - 45520607
Alignment:
Q  247 cataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaa 337  Q
    |||| ||||||||||| ||| ||||||||||||||||||||| |||||||||  |||||         || || |||||||||||||||||||||| |||    
T  45520416 catagattaagaaatggaataaaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaa 45520515  T
Q  338 attgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||| |||||||||||||||||||| |||  ||| ||||||||| ||        ||||||||||||| |||||||||||||||||||||||    
T  45520516 attgtatgagagaaaagtttgagtatttatcaaggataaagttggaagaaaaaat-taaagttgtattgaaaatgtaaagtgacattcatttt 45520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 204 - 435
Target Start/End: Complemental strand, 44855481 - 44855239
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| |||||||| |||| ||||  |  |  |||| ||||||||||||  |||||||||||||||  | |||||  |||||||||| |||    
T  44855481 tactccctccgtttcaaaatgagcgtcgctttacgctttggcacacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgc 44855382  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaag--ttgggagnnnnnnn 392  Q
    ||         ||  |||||||||| |||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||  |||| ||           
T  44855381 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggattatttattgagggtaaagaattggaagagaaaac 44855282  T
Q  393 gtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
     ||||||||||||||||||||||||||||||| |||| |||||    
T  44855281 ttaaagttgtattggaaatgtaaagtgacatttatttcgaaac 44855239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 28116367 - 28116243
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtg--agagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||||| || |||||||||||||  |||||||||||||||||| |||| ||||||||||||| ||        ||||||||||||||||    
T  28116367 aagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattggaa 28116268  T
Q  410 atgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||||| |||||||||    
T  28116267 atgtaaagtgacatttattttgaaa 28116243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 47321385 - 47321141
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| | |||||| |||  ||| ||||| |||   | |||| || |||||||||| |     
T  47321385 atactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaata 47321286  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggag-nnnnn 390  Q
     ||         || |||||||||| |||||||||||||||||||||||| ||  |||||||||| |||||| |||||||||||||||||| ||          
T  47321285 accttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaa 47321186  T
Q  391 nngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
       ||||||||||||| ||||||||||||||||||||||| ||||    
T  47321185 aattaaagttgtattgaaaatgtaaagtgacattcattttaaaac 47321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 32140900 - 32141062
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    |||||| |||||||| |||||||||||   |||||||||||  ||| | ||||||||||  ||||||||||||||||||||||||| |||||||||| ||    
T  32140900 atactctctccgtttcaaaatgagtgttaatttaaccaattgtacacagattaagaaattgaatgaaataatcattagacataacacttttactaaactg 32140999  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||         ||  ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  32141000 cccctactttataaacaaaagacaaacataaatttgcattgaaaattgtgtgagagaaaagtt 32141062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 204 - 385
Target Start/End: Complemental strand, 42672626 - 42672436
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||| | ||||| ||||||||||||  ||||  ||||| |||| |||||||| |||  ||||||||||||||||||||||||| |||||||||| | |    
T  42672626 tactccatgcgtttcaaaatgagtgtcaatttagtcaattgcacacaaattaaggaatataatgaaataatcattagacataacacttttactaaactac 42672527  T
Q  304 cca---------ataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag 385  Q
     ||         | ||||||||||| ||||||||| |||||||||||||| ||||| |||||  ||||| |||||||||||||||||||||    
T  42672526 tcatactttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaagagagaagttgaagtatttattgagggtaaagttgggag 42672436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 31941680 - 31941555
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaat--tgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    ||||||||||||||||||||||||||||  |||| ||||||| |||| |||||| |||||||||||||||||| ||        ||||||||||||| ||    
T  31941680 aagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaa 31941581  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||| ||||    
T  31941580 atgtaaagtgacattcattttaaaac 31941555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 252 - 356
Target Start/End: Complemental strand, 34360194 - 34360081
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||| |||||         || ||||||||||||||||||||||||||||||||||    
T  34360194 attaaggaatgaaatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgt 34360095  T
Q  343 gtgagagaaaagtt 356  Q
    ||||||||||||||    
T  34360094 gtgagagaaaagtt 34360081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 6510244 - 6510115
Alignment:
Q  306 aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtatt 405  Q
    |||||||||||||||||||| || |||| |||||||||| ||||||||| | |||||| ||||||||||||||||| |||        ||||||||||||    
T  6510244 aataaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtggagtatttattgagggtaaagttgagagaaaaaagttaaagttgtatt 6510145  T
Q  406 ggaaatgtaaagtgacattcattttgaaac 435  Q
    | |||| |||||||||||| ||||||||||    
T  6510144 gaaaatataaagtgacatttattttgaaac 6510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 34124420 - 34124292
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagaga--aaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||||||| ||        |||||||| ||||    
T  34124420 aaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattg 34124321  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
     |||||||||| |||||||||||| ||||    
T  34124320 aaaatgtaaagcgacattcattttaaaac 34124292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 52732827 - 52732667
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||| ||||||||||||||| |||||||  |  | ||||||| ||||| ||||| ||||||||||||||| || |||||| |||||||||| |||    
T  52732827 tactccctc-gttttaaaatgagtgacgttttaggctttgacacatagattaaaaaatggaatgaaataatcattggatataacacttttactaaactgc 52732729  T
Q  304 cc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||         ||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  52732728 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 52732667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 45889688 - 45889561
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||||| || ||        |||||||||||||    
T  45889688 aaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaagttaaagttgtattg 45889589  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
     |||||| ||| |||||||||||||||||    
T  45889588 aaaatgt-aagcgacattcattttgaaac 45889561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 56556193 - 56556352
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| | |||||| |||  |||||   ||||||||||||||||| ||||||||||||     
T  56556193 atactccctccgttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaattgaatga---aatcattagacataacacttttactaaatta 56556289  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
     ||         || ||||| ||||||||||  || |||||||||||||||||||||||||||    
T  56556290 tccttgctttataagaaaaatacaaacttaacattacattgaaaattgtgtgagagaaaagtt 56556352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 32140783 - 32140886
Alignment:
Q  196 caatatgatactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttac 295  Q
    |||||| ||| ||| ||||||| ||||||||||||||||||  ||||| |||| |||||||| |||||||| |||||||||||| |||||||| ||||||    
T  32140783 caatattataatccatccgtttcaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgaaatcaaataatcattaaacataacacttttac 32140882  T
Q  296 taaa 299  Q
    ||||    
T  32140883 taaa 32140886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 214 - 434
Target Start/End: Complemental strand, 11835331 - 11835105
Alignment:
Q  214 gttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca------a 307  Q
    |||||| |||||||||||||| ||    | ||| ||| ||||||||||||||||||||||| ||||| ||||||| ||||| |||| | || |      |    
T  11835331 gttttacaatgagtgtcgtttaaagttttgacatatagattaagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagttta 11835232  T
Q  308 taa--aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtatt 405  Q
    |||  ||||| |||||||||||||||||||||||||||||||||  ||| |||||||| |||||| |||||| |||  ||        ||||||| ||||    
T  11835231 taagaaaagataaacttaaagttgcattgaaaattgtgtgagag--aaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatatt 11835134  T
Q  406 ggaaatgtaaagtgacattcattttgaaa 434  Q
      |||||||||||||||||||||||||||    
T  11835133 aaaaatgtaaagtgacattcattttgaaa 11835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 15501129 - 15501230
Alignment:
Q  264 aatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaag 354  Q
    |||||||||||||||||||||||||||||||||||| |||||         || ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaag 15501228  T
Q  355 tt 356  Q
    ||    
T  15501229 tt 15501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 244 - 430
Target Start/End: Original strand, 29289843 - 29290040
Alignment:
Q  244 acacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc------------aataaaaagacaaacttaaagttgca 331  Q
    |||||||  |||||||||| ||||||||||||||||||||||| ||||||| ||||| |||             || ||||||||||||||||| |||||    
T  29289843 acacataggttaagaaatggaatgaaataatcattagacataatatttttaataaatcgcctttactttataaaaaaaaaaagacaaacttaaaattgca 29289942  T
Q  332 ttgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcatttt 430  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||||| | ||        | ||||||||||| |||| |||||||||||| |||||    
T  29289943 ttgaaaattgtgtgagagaaaagttgaagtatttattga-ggtaaagtttgaagaaaaaaattgaagttgtattgaaaatataaagtgacattaatttt 29290040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 203 - 435
Target Start/End: Original strand, 43421038 - 43421270
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||| ||||||||||| | ||||| |  |  |||| ||||||||||||| ||||||||||||||| || |||| | |||||||||||||    
T  43421038 atactccatccgtttcaaaatgagtgttgctttaaactttggcacacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattg 43421137  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnng 393  Q
    | |         || ||||||||||| |||||||||||||||| ||||||||||||||||  | ||         |||||||||||||| ||            
T  43421138 ctcttactttataagaaaaagacaaaattaaagttgcattgaatattgtgtgagagaaaacctgga---------gagggtaaagttggaagaaaaaaat 43421228  T
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  43421229 taaagttgtatgggaaatgtaaagtgaccttcattttgaaac 43421270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 315 - 435
Target Start/End: Complemental strand, 6462133 - 6462006
Alignment:
Q  315 acaaacttaaagttgcattgaaaattgtgtga----gagaaaagtttgagtatctattgagg---gtaaagttgggagnnnnnnngtaaagttgtattgg 407  Q
    |||||||||||||||||||||| |||||||||    || |||||||||||||| ||||||||   |||||||||| ||        ||||||||||||||    
T  6462133 acaaacttaaagttgcattgaatattgtgtgaaatagataaaagtttgagtatttattgaggagggtaaagttggaagaaaaaaattaaagttgtattgg 6462034  T
Q  408 aaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||| |||||||||||||||||    
T  6462033 aaatgtaaagcgacattcattttgaaac 6462006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 19282439 - 19282565
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgagaga--aaagtttgagtatctattgagggtaaagttgggagnnnnnnngt-aaagttgtattgga 408  Q
    |||||||||||||| ||| |||  |||||||||||||||  |||||| |||||| |||||| ||||||||||| ||        | ||||||||||||||    
T  19282439 aagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagtatttattgaaggtaaagttggaagaaaaaaaattaaagttgtattgga 19282538  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||||    
T  19282539 aatgtaaagtgacattcattttgaaac 19282565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 435
Target Start/End: Original strand, 17317889 - 17317998
Alignment:
Q  327 ttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggag-nnnnnnngtaaagttgtattggaaatgtaaagtgacattc 425  Q
    |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||  ||         |||||||||||||||||||||| |||||||||    
T  17317889 ttgcattgaaaattgtgtgagataaaagtttgagtatttattgaaggtaaagttgaaagaaaaaaaattaaagttgtattggaaatgtaatgtgacattc 17317988  T
Q  426 attttgaaac 435  Q
    | ||||||||    
T  17317989 agtttgaaac 17317998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 51434284 - 51434412
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    |||||||| ||||| |||||||||||||||||||||  ||||||||||||  ||||| |||||||||||||||| | ||        |||||||| |||     
T  51434284 aaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaaggaaaaaattaaagttgcatta 51434383  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||| |||||||||||| ||||    
T  51434384 gaaatgtaaagcgacattcattttaaaac 51434412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 31817114 - 31817276
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    ||||||||| |||| ||||| ||||||| ||||  |  | ||||| ||||||||||||| ||||||||||||||| || ||||| ||||||||||| | |    
T  31817114 tactccctctgtttcaaaattagtgtcgctttaggctttgacacacaaattaagaaatggaatgaaataatcattggatataacgtttttactaaacttc 31817213  T
Q  304 cc----------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||          |  ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  31817214 ccttactttataagaaaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 31817276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 50072438 - 50072333
Alignment:
Q  254 taagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaa---taaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
    ||||||||| ||||||||||||||| || ||||| ||||||||||| |||||     | | |||||||| |||||||||||||||||||||||||||| |    
T  50072438 taagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataagacaaaattaaagttgcattgaaaattgtgtgagaaa 50072339  T
Q  351 aaagtt 356  Q
    ||||||    
T  50072338 aaagtt 50072333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 213 - 379
Target Start/End: Original strand, 4408099 - 4408276
Alignment:
Q  213 cgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc------- 305  Q
    ||||| ||||||| ||||| |||||| |||| ||||||||||||| |||||||| || || |||   | ||||||| |||||||||| |  ||           
T  4408099 cgtttcaaaatgaatgtcgctttaactaattgcacataaattaaggaatgaaataaagtagtcaagtgtcataacaattttactaaaataaccttactat 4408198  T
Q  306 --aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagt 379  Q
      || ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| || |||||||| ||||||    
T  4408199 ataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaagt 4408276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 35928612 - 35928488
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattgga 408  Q
    ||||||| ||||||||| |||||||||||||  ||||| ||||| |||  ||||| |||||||||||||||||| ||        ||||||||||||| |    
T  35928612 aaaaagataaacttaaaattgcattgaaaat--tgtgaaagaaacgttgcagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaa 35928515  T
Q  409 aatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||| ||| ||||||||||    
T  35928514 aatgtaaagtgatatttattttgaaac 35928488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 39671069 - 39671182
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||| |||||||| ||||||||||||||||  ||||||||| | ||          || ||||| ||||||||||||||||||||||||||||    
T  39671069 attaagaaatggaatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattgt 39671168  T
Q  343 gtgagagaaaagtt 356  Q
    ||||||||||||||    
T  39671169 gtgagagaaaagtt 39671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 51737237 - 51737334
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaatt 301  Q
    |||||||||| ||||||||||||||||| ||||  ||| |  ||| |||||||| |||  ||||||||||| ||||||||||||| ||||||||||||    
T  51737237 tactccctccattttaaaatgagtgtcgctttagtcaactgtacacaaattaaggaatagaatgaaataataattagacataacacttttactaaatt 51737334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 45903446 - 45903559
Alignment:
Q  321 ttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtga 420  Q
    |||||||||||||||||||||  ||||||||||||  |||||  | |||||| | ||||||| ||        ||||||||||||| |||||||||||||    
T  45903446 ttaaagttgcattgaaaattggatgagagaaaagtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtga 45903545  T
Q  421 cattcattttgaaa 434  Q
    ||||||||||||||    
T  45903546 cattcattttgaaa 45903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 21045256 - 21045209
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21045256 aaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 21045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 50623325 - 50623263
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||||||||||||||||||||||||||||||  |||||||||| | |||||| ||||||||    
T  50623325 tactccctccgttttaaaatgagtgtcgttttagtcaattacacacatattaaggaatgaaat 50623263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 29519448 - 29519509
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||| |||||||| |||||    
T  29519448 tccgttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataaaata 29519509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 54233941 - 54233900
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  54233941 aaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 252 - 356
Target Start/End: Complemental strand, 54512212 - 54512099
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc---------aataaaaagacaaacttaaagttgcattgaaaattgt 342  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||| ||| |         || |||| |||||| |||||||||||||||| |||||    
T  54512212 attaagaaatgaaatgaaataataattggatataacgtttttactaaactgctcttactttataagaaaatgacaaaattaaagttgcattgaacattgt 54512113  T
Q  343 gtgagagaaaagtt 356  Q
    ||||||||||||||    
T  54512112 gtgagagaaaagtt 54512099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 56556367 - 56556408
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  56556367 taaagttgtattggaaatgtaaagtgacattcattttgaaac 56556408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 50072319 - 50072243
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaa 470  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||        |||||||||||||||||| |||||    
T  50072319 taaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaa 50072243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 51930699 - 51930652
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 356  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  51930699 aaaatgacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 51930652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 53814412 - 53814475
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||| | |||||| ||||||||    
T  53814412 atactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaat 53814475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 435
Target Start/End: Complemental strand, 55126737 - 55126494
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattg 302  Q
    ||||||| ||||||||||||||| |||||||||| |||||| |||||  |||||| |||||||| || || |||   | |||| || |||||||||| |     
T  55126737 atactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaata 55126638  T
Q  303 ccc---------aataaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnn 391  Q
     ||         || || ||||||||||||||||||||  |||||||||||  |||||||||||| |||||| | || |||||| |||| | ||          
T  55126637 accttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagtatttttttagggtagagttagaagagaaaa 55126538  T
Q  392 ngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
      ||||||||||||| |||| |||| ||||||||||||| ||||    
T  55126537 attaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 37654651 - 37654589
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||||||||||| |||||||||||||||||| |||||| |||| | |||||| ||||||||    
T  37654651 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaat 37654589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 54042097 - 54042167
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacata-aattaagaaatgaaatgaaata 272  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||| | |||||||||||| ||| |||||    
T  54042097 atactccatccgttttaaaatgagtgtcgttttagccaattgcacacataattaagaaatggaataaaata 54042167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 15501259 - 15501300
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15501259 taaagttgtattggaaatgtaaagtgacattcattttcaaac 15501300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 21045194 - 21045153
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  21045194 taaagttgtattgaaaatgtaaagtgacattcattttgaaac 21045153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 32141076 - 32141117
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  32141076 taaagttgtattggaaatgtaaagtggcattcattttgaaac 32141117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 52732637 - 52732596
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  52732637 taaagttgtattggaaatgtaaagtgacattcattttaaaac 52732596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 31817289 - 31817329
Alignment:
Q  395 aaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  31817289 aaagttgcattggaaatgtaaagtgacattcattttgaaac 31817329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 38761857 - 38761925
Alignment:
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg 381  Q
    ||||||| |||||||||| | ||||||||||||  ||||||||||| |||||| |||||||| ||||||||    
T  38761857 aaagacacacttaaagttaccttgaaaattgtg--agagaaaagttggagtatttattgaggttaaagttg 38761925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 38991678 - 38991737
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||| ||||||||||||||||||||||||||||  ||||| |||| | |||||||||||    
T  38991678 atacttcctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaagaaatg 38991737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 40345262 - 40345325
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||| ||||| |||| |||||| |||| |||||||  ||||||||    
T  40345262 atactccctccgttttaaaatgaatgtcgctttagccaattgcacacaaattaatgaatgaaat 40345325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 30780326 - 30780292
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaac 238  Q
    |||||||||||||||||||||||||||||||||||    
T  30780326 tactccctccgttttaaaatgagtgtcgttttaac 30780292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 1868212 - 1868253
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  1868212 taaagttgcattgaaaatgtaaagtgacattcattttgaaac 1868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 7905922 - 7905955
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||||||    
T  7905922 atactccctccgttttaaaatgagtgtcgtttta 7905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 39671195 - 39671236
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  39671195 taaagttgtattggaaatgtaaaacgacattcattttgaaac 39671236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 51906317 - 51906268
Alignment:
Q  250 aaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||||||| ||||||||||||| || |||||||| ||||||||||    
T  51906317 aaattaagaaatggaatgaaataatcaataaacataacacttttactaaa 51906268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 51930638 - 51930597
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  51930638 taaaattgtattggaaatgtaaagcgacattcattttgaaac 51930597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 52847970 - 52848027
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||||||||||||||||||||||||| |||||| |||||| || | | ||||||||||    
T  52847970 tactccctccgttttaaaatgagtgttgttttagccaattgcatacagattaagaaat 52848027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 24941117 - 24941077
Alignment:
Q  208 ccctccgttttaaaatgagtgtcgttttaaccaattacaca 248  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  24941117 ccctccgtttcaaaatgagtgtcgttttaaccaattgcaca 24941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 34316461 - 34316393
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||| |||||||| ||||||||||||  ||||||||||| |||| | |||||| |||||||| |||||    
T  34316461 tactcactccgtttcaaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaata 34316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 44572070 - 44572038
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||||||||    
T  44572070 tactccctccgttttaaaatgagtgtcgtttta 44572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 370
Target Start/End: Complemental strand, 3093544 - 3093411
Alignment:
Q  245 cacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca------ataa--aaagacaaacttaaagttgcattgaa 336  Q
    |||||| ||||||||||  ||| ||||||||||||||||||||| ||| | ||||||| ||       ||||  ||| | ||| |||||||||||| | |    
T  3093544 cacatagattaagaaattgaataaaataatcattagacataacactttcattaaattgtccttcctttataagaaaaaagaaatttaaagttgcatcgga 3093445  T
Q  337 aattgtgtgagagaaaagtttgagtatctattga 370  Q
    ||||||||||||||||||||  ||||| ||||||    
T  3093444 aattgtgtgagagaaaagttgaagtatttattga 3093411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 45889795 - 45889740
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||| |||||||||||||||||| |||||| |||| | |||||| ||||||||    
T  45889795 tccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaat 45889740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 49089693 - 49089642
Alignment:
Q  215 ttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||||||||||||||| ||||| |||| | |||||| ||||||||    
T  49089693 ttttaaaatgagtgtcgttttaatcaattgcacacatattaaggaatgaaat 49089642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 54234052 - 54233993
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    ||||||||||| ||||||||||||| |||| |||||| || | ||||||||||||| |||    
T  54234052 tccctccgtttcaaaatgagtgtcgctttagccaattgcatacaaattaagaaatggaat 54233993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 55548249 - 55548288
Alignment:
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagaga 350  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  55548249 aaagacaaacttaaagttgcattggaaattgtgagagaga 55548288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 2493343 - 2493281
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaat 266  Q
    |||||| ||||||| |||||||||||||||||  |||||| |||| | |||||| ||||||||    
T  2493343 tactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaat 2493281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 19451422 - 19451384
Alignment:
Q  198 atatgatactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  19451422 atattatactccctccgttttaaaatgagtgtcatttta 19451384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 32141164 - 32141130
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaac 238  Q
    |||||||||||||| ||||||||||||||||||||    
T  32141164 tactccctccgtttcaaaatgagtgtcgttttaac 32141130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 34534119 - 34534157
Alignment:
Q  309 aaaaagacaaacttaaa-gttgcattgaaaattgtgtga 346  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  34534119 aaaaagacaaacttaaaagttgcattgaaaattgtgtga 34534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 37624792 - 37624754
Alignment:
Q  198 atatgatactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  37624792 atattatactccatccgttttaaaatgagtgtcgtttta 37624754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 45520659 - 45520621
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  45520659 atactccatccgttttaaaatgagtgtcattttaaccaa 45520621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 47817689 - 47817727
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  47817689 atactccctccgtttcaaaatgagtgtcgttttagccaa 47817727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 51434170 - 51434228
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    |||| ||||||||||||||||| ||||| ||||||||||| || ||| |||||| ||||    
T  51434170 tacttcctccgttttaaaatgaatgtcgctttaaccaattgcatatatattaaggaatg 51434228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 6232148 - 6232189
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||    
T  6232148 taaagttgtattgaaaatgtaaattgacatttattttgaaac 6232189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 34124534 - 34124477
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    |||| ||||||||| ||||||||||||| |||| |||||| |||| | ||||||||||    
T  34124534 tacttcctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaat 34124477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 38510171 - 38510204
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| ||||||||||||||||||||||||||    
T  38510171 atactccatccgttttaaaatgagtgtcgtttta 38510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 39982059 - 39982088
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||||||||||||||||||||||||||    
T  39982059 tccctccgttttaaaatgagtgtcgtttta 39982088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 45043792 - 45043759
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||||| ||||||||||||||||||||||||||    
T  45043792 atactccatccgttttaaaatgagtgtcgtttta 45043759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 50621389 - 50621356
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgtttta 236  Q
    ||||| ||||||||||||||||||||||||||||    
T  50621389 atacttcctccgttttaaaatgagtgtcgtttta 50621356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 56422920 - 56423009
Alignment:
Q  210 ctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    |||||||| ||||||||||||| ||||  |  | ||||| | ||||||||||  ||||||||||||||| || |||||  ||||||||||    
T  56422920 ctccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaa 56423009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 17499919 - 17499887
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||||||||||||||||| ||||    
T  17499919 tactccctccgttttaaaatgagtgtcgattta 17499887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 31941795 - 31941755
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  31941795 atactccctccgtttcaaaatgagtgtcgctttagccaatt 31941755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 39985059 - 39985019
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaatt 243  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  39985059 atactccctccgtttcaaaatgagtgtcgctttagccaatt 39985019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 49089415 - 49089447
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  49089415 tactccctccgtttcaaaatgagtgtcgtttta 49089447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 50203032 - 50203064
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  50203032 tactccatccgttttaaaatgagtgtcgtttta 50203064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 54233884 - 54233844
Alignment:
Q  394 taaagttgtattggaaatgtaaagtgacattcattttgaaa 434  Q
    ||||||||||||| |||||||||| | ||||||||||||||    
T  54233884 taaagttgtattgaaaatgtaaagcggcattcattttgaaa 54233844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 98; Significance: 7e-48; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 213 - 435
Target Start/End: Original strand, 12989 - 13211
Alignment:
Q  213 cgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataaaa 312  Q
    |||||||| |||| ||||||||||   |||| |||| | |||||| |||||||||||||||||||||||||||||| |||||||||| |||  || ||||    
T  12989 cgttttaagatgaatgtcgttttagttaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgcttaagaaaa 13088  T
Q  313 agacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatg 412  Q
    ||||||| |||||||| ||||||||||||||   ||||||||||  ||||| |||||||||||||||||||||        |||| ||||||||||||||    
T  13089 agacaaaattaaagttacattgaaaattgtgccggagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaaatg 13188  T
Q  413 taaagtgacattcattttgaaac 435  Q
    ||||||||| |||||||| ||||    
T  13189 taaagtgacgttcattttaaaac 13211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 204 - 430
Target Start/End: Original strand, 11994 - 12219
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgc 303  Q
    |||||||||||||| ||||||||||||| |||| | |||| |||| | |||||| |||| ||||||||||||||||||||||||| |||||||||| |||    
T  11994 tactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaaactgc 12093  T
Q  304 c--------caataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngta 395  Q
    |         || |||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||        ||    
T  12094 cttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttga---------gagggtaaagttggaagaaaaaaatta 12184  T
Q  396 aagttgtattggaaatgtaaagtgacattcatttt 430  Q
    ||||| ||||||||||||||| |||||||||||||    
T  12185 aagttatattggaaatgtaaaatgacattcatttt 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 211 - 381
Target Start/End: Complemental strand, 158322 - 158154
Alignment:
Q  211 tccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgcccaataa 310  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||  |||||||| ||||||| |||| | |||||| |||| |||||  | | || ||    
T  158322 tccgttttaaaatgagtgtcgttttagccaattg-acacaaattaaagaatgaaataaaataattattaaagataacacttttcctaaaaggtc-aagaa 158225  T
Q  311 aaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg 381  Q
    |||||||||||||||||||||||||||||| || ||||||||||||  ||||| |||||||||||||||||    
T  158224 aaagacaaacttaaagttgcattgaaaattatgcgagagaaaagttgtagtatttattgagggtaaagttg 158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 207 - 432
Target Start/End: Complemental strand, 1780 - 1546
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc- 305  Q
    ||||||||||||||||||||||||| ||||  |  |  |||| | ||||||||||  ||||||||||| ||| || ||||| |||||||||||||||||     
T  1780 tccctccgttttaaaatgagtgtcgctttaggctttagcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgccct 1681  T
Q  306 --------aataaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaa 397  Q
            || ||||||||||| |||||||||||||||||||| ||||||||||||||| |||  | |||||||| |||||||||  |        ||||    
T  1680 tactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaa 1581  T
Q  398 gttgtattggaaatgtaaagtgacattcattttga 432  Q
    |||||||||||||| ||||||||||||||||||||    
T  1580 gttgtattggaaatataaagtgacattcattttga 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 321851 - 321726
Alignment:
Q  312 aagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaa 409  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||| ||        ||||||||||||||||    
T  321851 aagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 321752  T
Q  410 atgtaaagtgacattcattttgaaac 435  Q
    |||||||| |||||||||||| ||||    
T  321751 atgtaaagcgacattcattttaaaac 321726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 70479 - 70607
Alignment:
Q  309 aaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattg 406  Q
    ||||| ||||||||||||||| ||||||||||||||  |||||||||||| |||||| |||||||||||||||||| ||        |||||||| ||||    
T  70479 aaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattg 70578  T
Q  407 gaaatgtaaagtgacattcattttgaaac 435  Q
     ||||||||||||||||||||||||||||    
T  70579 aaaatgtaaagtgacattcattttgaaac 70607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 70655 - 70616
Alignment:
Q  202 gatactccctccgttttaaaatgagtgtcgttttaaccaa 241  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  70655 gatactccctccgtttcaaaatgagtgtcgttttagccaa 70616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 70364 - 70422
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaat 261  Q
    ||||||| ||||||||||||||||||||| | ||||||||| || | | ||||||||||    
T  70364 atactccttccgttttaaaatgagtgtcgctataaccaattgcatacagattaagaaat 70422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 31781 - 31663
Alignment:
Q  207 tccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca 306  Q
    ||||||||||| ||||||||||| ||| || |||||| |||| |||||||  ||||||||||||||||||||||| |||||| |||||||||| || |||    
T  31781 tccctccgtttcaaaatgagtgttgttgtagccaattgcacacaaattaacgaatgaaatgaaataatcattagagataacacttttactaaactgtcca 31682  T
Q  307 ataaaaagacaaacttaaa 325  Q
    | ||||||| |||||||||    
T  31681 agaaaaagataaacttaaa 31663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 4068 - 4261
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccc----------aataaaaagacaaacttaaagttgcattgaaaattg 341  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||          || |||| |||||||||||||||  ||||||||||     
T  4068 attaagaaatggaatgaaacaatcattatacataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaaaatta 4167  T
Q  342 tgtgagagaaaagtttgagtatctattgagggtaaagttgggagnnnnnnngtaaagttgtattggaaatgtaaagtgacattcattttgaaac 435  Q
    ||||||||||||||| |||||| |||||||| ||||||||| ||        |||| ||||||| |||||||||||| ||||| ||||| ||||    
T  4168 tgtgagagaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaac 4261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 16000 - 16136
Alignment:
Q  252 attaagaaatgaaatgaaataatcattagacataacatttttactaaattgccca------ataaaaa--gacaaacttaaagttgcattgaaaattgtg 343  Q
    ||||| |||| ||||||||||||||||| | ||||||||||||||||| | ||        |||||||  ||||||||||||||||||||||||||||||    
T  16000 attaaaaaattaaatgaaataatcattatatataacatttttactaaactacctttactttataaaaaatgacaaacttaaagttgcattgaaaattgtg 16099  T
Q  344 tgagagaaaagtttgagtatctattgagggtaaagtt 380  Q
    ||||||||| ||| || ||| ||||||||||||||||    
T  16100 tgagagaaaggttggaatatttattgagggtaaagtt 16136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 53; Significance: 5e-21; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 1815 - 1719
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||||||||| ||||||||||||| ||||  |  |  |||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  1815 atactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaa 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 9554 - 9458
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaataatcattagacataacatttttactaaa 299  Q
    ||||||||||||||| ||||||||||||| ||||  |  |  |||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  9554 atactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaa 9458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 1684 - 1594
Alignment:
Q  394 taaagttgtatt--ggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagtac 482  Q
    ||||||||||||  |||||||||||||||||||||||||||||  ||        |||||||||||||||||| ||||| | |||||||||    
T  1684 taaagttgtattttggaaatgtaaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggagtac 1594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 9423 - 9333
Alignment:
Q  394 taaagttgtatt--ggaaatgtaaagtgacattcattttgaaactatannnnnnngctaaagtgacactcattatgaaatgaagggagtac 482  Q
    ||||||||||||  |||||||||||||||||||||||||||||  ||        |||||||||||||||||| ||||| | |||||||||    
T  9423 taaagttgtattttggaaatgtaaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggagtac 9333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 7732 - 7799
Alignment:
Q  315 acaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttgg 382  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||  |||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagattaaagttgg 7799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 8274 - 8158
Alignment:
Q  321 ttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatctattgagggtaaagttg--ggagnnnnnnngtaaagttgtattggaaatgtaaagt 418  Q
    |||||||||| ||||||||||||||||||||||||| |||||| | |||||| ||||||||   ||         ||||||||||||| ||||||||| |    
T  8274 ttaaagttgctttgaaaattgtgtgagagaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaatt 8175  T
Q  419 gacattcattttgaaac 435  Q
    |||||||||||||||||    
T  8174 gacattcattttgaaac 8158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 9571 - 9630
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatg 262  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| | |||||| ||||    
T  9571 atactccctccgtttcaaaatgagtgtcgttttagccaattacacacatattaaggaatg 9630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 20992 - 21061
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaaccaattacacataaattaagaaatgaaatgaaata 272  Q
    ||||||||||||||||||||| ||||||| |||| |||||| |||||| |||||| ||| |||| |||||    
T  20992 atactccctccgttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaata 21061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 21281 - 21247
Alignment:
Q  203 atactccctccgttttaaaatgagtgtcgttttaa 237  Q
    ||||||| |||||||||||||||||||||||||||    
T  21281 atactccatccgttttaaaatgagtgtcgttttaa 21247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 3733 - 3765
Alignment:
Q  204 tactccctccgttttaaaatgagtgtcgtttta 236  Q
    |||||| ||||||||||||||||||||||||||    
T  3733 tactccttccgttttaaaatgagtgtcgtttta 3765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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