View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2467R-Insertion-7 (Length: 380)
Name: NF2467R-Insertion-7
Description: NF2467R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2467R-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 8 - 380
Target Start/End: Complemental strand, 4302712 - 4302340
Alignment:
| Q |
8 |
ataccaaacttgtttcttcgtataaaagcattcccccaccctcaagcaacgtcttgatttcgtattctatccgttctaatcaataatgccaattgttcaa |
107 |
Q |
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| T |
4302712 |
ataccaaacttgtttcttcgtataaaagcattcccccaccctcaagcaacgtcttgatttcatattctatccgttctaatcaataatgccaattgttcaa |
4302613 |
T |
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| Q |
108 |
aattaaatatggtgaaaatttatagcaagtggcaattggttgccaaattaaagagtctaaaagtcaatggcccatcaaggaaattaaatgttaatatgat |
207 |
Q |
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| T |
4302612 |
aattaaatatggtgaaaatttatagcaagtggcaattggttgccaaattaaagagtctaaaagtcaatggcccatcaaggaaattaaatgttaatatgat |
4302513 |
T |
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| Q |
208 |
tgatgaccatggactccatttagttttttgtttataactgaaactttgataaattaatcctactcttcaattagaactcataggcaggaagatactgaaa |
307 |
Q |
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| T |
4302512 |
tgatgaccatggactccatttagttttttgtttataactgaaactttgataaattaatcctactcttcaattagaactcataggcaggaagatactgaaa |
4302413 |
T |
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| Q |
308 |
atgaagttccataaggagaatctggatttggttttagtcccttctggattgctgatcatgtttgcttatcacc |
380 |
Q |
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| T |
4302412 |
atgaagttccataaggagaatctggatttggttttagtcccttctggattgctgatcatgtttgcttatcacc |
4302340 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 380
Target Start/End: Original strand, 55810568 - 55810712
Alignment:
| Q |
235 |
ttgtttataactgaaactttgataaattaatcctactcttcaattagaactcataggcaggaagatactgaaaatgaagttccataaggagaatctggat |
334 |
Q |
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| T |
55810568 |
ttgtttataactgaaaccttgtgaaattaatcatactcctcaattagcactc-taggaaggaagaaactgaaaatgaagttccacaaggagtgtctggat |
55810666 |
T |
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| Q |
335 |
ttggttttagtcccttctggattgctgatcatgtttgcttatcacc |
380 |
Q |
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| T |
55810667 |
ttgattttggtcctttgtgagttgctagtcatgtttgcttatcacc |
55810712 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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