View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2469_low_1 (Length: 337)
Name: NF2469_low_1
Description: NF2469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2469_low_1 |
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Alignment Details
Target: chr6 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 19 - 330
Target Start/End: Original strand, 24812414 - 24812725
Alignment:
| Q |
19 |
ccaaataggctacatgaaaaaatcttaccatacctataccaaatggaaggctttatctgttagaaaacagtgttctgattgtggatagcaaaaactagaa |
118 |
Q |
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| T |
24812414 |
ccaaataggctacatgaaaaaatcttaccatacctataccaaatggaaggctttatctgttagaaaacagtgttctgattgtggatagcaaaaactagaa |
24812513 |
T |
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| Q |
119 |
gtttgtttaaatttctcgacacaacagcgctatagcgccactataatctctatttggcaatattttcaaagttatggtatactagtaaatacctttgcac |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24812514 |
gtttgtttaaatttctcgacacaacagcgctatagcgccgctataatctctatttggcaatattttcaaagttatggtatactagtaaatacctttgcac |
24812613 |
T |
|
| Q |
219 |
catttcttcaacaaattgaggaggatgagaacttgcaacagcattgtaccaattgatactgtcacctatcaaaggccaacctctccttcctggtggcaat |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24812614 |
catttcttcaacaaattgaggaggatgagaacttgcaacagcattgtaccaattgatactgtcacctatcaaaggccaacctctccttcctggtggcaat |
24812713 |
T |
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| Q |
319 |
cttcctatgctt |
330 |
Q |
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|||||||||||| |
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| T |
24812714 |
cttcctatgctt |
24812725 |
T |
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