View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2470_high_5 (Length: 336)
Name: NF2470_high_5
Description: NF2470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2470_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 20 - 329
Target Start/End: Original strand, 25131687 - 25131996
Alignment:
| Q |
20 |
tttactgataggattaagaactctctttgatcttctttggagtggaatatgttctttcgtaaatgctttttctatagcatgttaatcctacggtaggttt |
119 |
Q |
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| T |
25131687 |
tttactgatagaattaagaactctctttgatcttctttggagtggaatatgttctttcgtaaatgctttttctatagcatgttaatcctatggtaggttt |
25131786 |
T |
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| Q |
120 |
catgattttaaaatttctttagatattgcttgctaaaatattacgtcctgcagaaaatatttcatttaaagtttctttttcacttccattcctctttgtt |
219 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
25131787 |
catgattttaaaatttctttagatattgtttgctaaaatattacgtcctgcagaaaatatttcatttgaagtttctttttcacttccattcctctttgtt |
25131886 |
T |
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| Q |
220 |
tggcttcagtggctgtataaactgacaggtattttggaactttattggcttcacttccattccccttcccttctgttttgcttcacttcttgttagggca |
319 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25131887 |
tggcttcagtggctgtataaactgacaggtcttttggaactttattggcttcacttccattccccttcccttctgttttgcttcacttcttgttagggca |
25131986 |
T |
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| Q |
320 |
tatccctttg |
329 |
Q |
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|||||||||| |
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| T |
25131987 |
tatccctttg |
25131996 |
T |
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