View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2470_low_3 (Length: 398)
Name: NF2470_low_3
Description: NF2470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2470_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 25131329 - 25131679
Alignment:
| Q |
20 |
agtcaaaccttcaattttgattcaaaagttaccaaacggctctttttctttcttgtttttactttctaaaatcatgtttgatataaggcaatttaaaaca |
119 |
Q |
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| T |
25131329 |
agtcaaaccttcaattttgattcaaaagttaccaaacggctctttttctttcttgtttttactttctaaaatcatgtttgatataaggcaatataaaaca |
25131428 |
T |
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| Q |
120 |
gaactataagaatgaaatctgaagcttgggctgataaactatcacccacaataattcacaaattttctgaattgggcagcgaacttctagatcatatttg |
219 |
Q |
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| T |
25131429 |
gaactataagaatgaaatctgaagcttgggctgataaactatcacccacaataattcacaaattttctgaattgggtagcgaacttctagatcatatttg |
25131528 |
T |
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| Q |
220 |
aaaataacaaaatcgagaactgcacaatccacaactgaattaaaacacgaatctggtagaataataatgatgcctttcaatttctttatgtct----tat |
315 |
Q |
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| T |
25131529 |
aaaataacaaaatcgagaactgcacaatccacaactgaattaaaacacgaatctggtagaataata-----------caatttctttatgtcttacctat |
25131617 |
T |
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| Q |
316 |
tatttaataagtttcttcaatcagactaannnnnnnnaagaggatgagatttgtgtgactaag |
378 |
Q |
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| T |
25131618 |
tatttaataagtttcttcaatcaaactaa-tttttttaagaggatgagatttgcgtgactaag |
25131679 |
T |
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