View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2471_low_3 (Length: 350)
Name: NF2471_low_3
Description: NF2471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2471_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 269
Target Start/End: Complemental strand, 6080853 - 6080600
Alignment:
| Q |
16 |
attaaatatatattctgttaaaggtgtgatctaggcgtaagagatgagaaagaaagtagaaggaattatacaaacattgatggctattattagatggagg |
115 |
Q |
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| T |
6080853 |
attaaatatatattcttttaaaggtgtgatctaggcgtaagagatgagaaagaaagtagaagtaactatacaaacattgatggctattattagatggagg |
6080754 |
T |
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| Q |
116 |
aggtgccttctgcctaatgggtttggtccctattagctaaaacacttcccattccagatgcctaagaattatagtgtttactgtatgccaaaacttggtt |
215 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6080753 |
aggtgcctactgcctaatgggtttggtccctattagctaaaacacttcccattccagatgcctaagaattatagtgtttactgtatgccaaaacttggtt |
6080654 |
T |
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| Q |
216 |
ggaatccaagacctcatttaatttcaagagattcatctaaacattattaaaatt |
269 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
6080653 |
ggaatccaagacctcatttaatttgaagagattcatctaaacattattaaaatt |
6080600 |
T |
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