View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2472R-Insertion-2 (Length: 870)

Name: NF2472R-Insertion-2
Description: NF2472R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2472R-Insertion-2
NF2472R-Insertion-2
[»] chr2 (33 HSPs)
chr2 (20-870)||(32705971-32706791)
chr2 (23-226)||(32718174-32718373)
chr2 (47-226)||(32724603-32724778)
chr2 (374-448)||(32718577-32718651)
chr2 (374-448)||(32724982-32725056)
chr2 (240-293)||(32718419-32718472)
chr2 (240-293)||(32724824-32724877)
chr2 (801-853)||(32749254-32749306)
chr2 (549-602)||(12734929-12734982)
chr2 (570-602)||(14530530-14530562)
chr2 (558-602)||(28960211-28960255)
chr2 (572-602)||(8197541-8197571)
chr2 (572-602)||(8202301-8202331)
chr2 (549-603)||(12474926-12474980)
chr2 (549-602)||(227418-227471)
chr2 (549-602)||(1404161-1404214)
chr2 (570-603)||(2073306-2073339)
chr2 (549-602)||(3635323-3635376)
chr2 (549-602)||(4807824-4807877)
chr2 (549-602)||(9531600-9531653)
chr2 (549-602)||(9556369-9556422)
chr2 (549-602)||(12520062-12520115)
chr2 (562-603)||(13474213-13474254)
chr2 (549-602)||(17670697-17670750)
chr2 (549-602)||(25834907-25834960)
chr2 (549-602)||(28508907-28508960)
chr2 (549-602)||(30306261-30306314)
chr2 (570-599)||(35715856-35715885)
chr2 (549-602)||(38328370-38328423)
chr2 (549-602)||(38435181-38435234)
chr2 (570-603)||(38452685-38452718)
chr2 (549-602)||(41763043-41763096)
chr2 (549-602)||(43573130-43573183)
[»] chr5 (18 HSPs)
chr5 (513-761)||(3000932-3001177)
chr5 (23-198)||(2999292-2999461)
chr5 (387-453)||(2999682-2999748)
chr5 (406-453)||(7432420-7432467)
chr5 (228-293)||(2999481-2999553)
chr5 (469-515)||(3000803-3000849)
chr5 (803-869)||(3001217-3001283)
chr5 (549-602)||(12492384-12492437)
chr5 (549-603)||(3302073-3302127)
chr5 (549-602)||(408494-408547)
chr5 (549-602)||(4496613-4496666)
chr5 (570-603)||(10124387-10124420)
chr5 (570-603)||(10989084-10989117)
chr5 (549-602)||(14665941-14665994)
chr5 (570-603)||(16913881-16913914)
chr5 (549-602)||(28976859-28976912)
chr5 (549-602)||(29816611-29816664)
chr5 (570-603)||(32489296-32489329)
[»] chr6 (11 HSPs)
chr6 (369-453)||(14903439-14903523)
chr6 (150-226)||(14903644-14903720)
chr6 (549-602)||(579647-579700)
chr6 (549-603)||(5096063-5096117)
chr6 (549-603)||(9706999-9707053)
chr6 (549-603)||(34934829-34934883)
chr6 (549-602)||(12890804-12890857)
chr6 (549-602)||(28085605-28085658)
chr6 (549-602)||(31819060-31819113)
chr6 (549-602)||(34143765-34143818)
chr6 (549-602)||(34156381-34156434)
[»] chr3 (19 HSPs)
chr3 (558-603)||(48712074-48712119)
chr3 (549-602)||(25191606-25191659)
chr3 (547-602)||(52139027-52139082)
chr3 (549-603)||(31566160-31566214)
chr3 (549-603)||(40106619-40106673)
chr3 (549-602)||(22301-22354)
chr3 (549-602)||(311309-311362)
chr3 (549-602)||(2133612-2133665)
chr3 (549-602)||(5169061-5169114)
chr3 (549-602)||(12096705-12096758)
chr3 (570-603)||(15296157-15296190)
chr3 (570-603)||(27192473-27192506)
chr3 (549-602)||(31146928-31146981)
chr3 (570-603)||(43396081-43396114)
chr3 (570-603)||(45289090-45289123)
chr3 (570-603)||(45933375-45933408)
chr3 (549-602)||(48508464-48508517)
chr3 (549-602)||(53262370-53262423)
chr3 (549-602)||(54128608-54128661)
[»] scaffold0041 (1 HSPs)
scaffold0041 (549-603)||(16807-16861)
[»] chr4 (17 HSPs)
chr4 (549-602)||(6957827-6957880)
chr4 (549-602)||(43434153-43434206)
chr4 (558-602)||(32339797-32339841)
chr4 (549-602)||(436458-436511)
chr4 (572-601)||(4548274-4548303)
chr4 (549-602)||(21528517-21528570)
chr4 (570-603)||(23906296-23906329)
chr4 (549-602)||(30634106-30634159)
chr4 (549-602)||(31959814-31959867)
chr4 (570-603)||(38789622-38789655)
chr4 (570-603)||(48622542-48622575)
chr4 (570-603)||(49416957-49416990)
chr4 (549-602)||(50238615-50238668)
chr4 (549-602)||(50238701-50238754)
chr4 (570-603)||(50471777-50471810)
chr4 (549-602)||(52569515-52569568)
chr4 (549-602)||(55007975-55008028)
[»] chr1 (25 HSPs)
chr1 (549-602)||(3777260-3777313)
chr1 (549-602)||(6025834-6025887)
chr1 (570-602)||(22930643-22930675)
chr1 (570-602)||(31274401-31274433)
chr1 (570-602)||(43898459-43898491)
chr1 (569-603)||(36339803-36339837)
chr1 (549-599)||(39140744-39140794)
chr1 (549-603)||(49347392-49347446)
chr1 (549-603)||(52921309-52921363)
chr1 (549-602)||(696499-696552)
chr1 (549-602)||(1210974-1211027)
chr1 (549-602)||(25979231-25979284)
chr1 (549-602)||(29577481-29577534)
chr1 (570-603)||(29975449-29975482)
chr1 (549-602)||(30202130-30202183)
chr1 (549-602)||(32079177-32079230)
chr1 (549-602)||(34444585-34444638)
chr1 (570-603)||(40568409-40568442)
chr1 (549-602)||(41560458-41560511)
chr1 (570-603)||(42337806-42337839)
chr1 (570-603)||(43028807-43028840)
chr1 (549-602)||(43481798-43481851)
chr1 (549-602)||(44941776-44941829)
chr1 (549-602)||(50636310-50636363)
chr1 (549-602)||(50846791-50846844)
[»] chr8 (15 HSPs)
chr8 (570-602)||(35643608-35643640)
chr8 (407-451)||(39851723-39851767)
chr8 (549-603)||(44529454-44529508)
chr8 (549-603)||(45419464-45419518)
chr8 (570-599)||(1313814-1313843)
chr8 (549-602)||(1928587-1928640)
chr8 (549-610)||(4955420-4955481)
chr8 (549-602)||(10668497-10668550)
chr8 (549-602)||(11523723-11523776)
chr8 (558-603)||(12611735-12611780)
chr8 (549-602)||(14742082-14742135)
chr8 (549-602)||(25473403-25473456)
chr8 (574-603)||(29520903-29520932)
chr8 (549-602)||(32276914-32276967)
chr8 (549-602)||(36545378-36545431)
[»] chr7 (22 HSPs)
chr7 (558-602)||(12966254-12966298)
chr7 (549-603)||(33732061-33732115)
chr7 (549-599)||(40149016-40149066)
chr7 (549-603)||(40979927-40979981)
chr7 (549-603)||(48919341-48919395)
chr7 (549-602)||(1011275-1011328)
chr7 (549-602)||(2885722-2885775)
chr7 (549-602)||(5418303-5418356)
chr7 (549-602)||(11594189-11594242)
chr7 (549-602)||(12841275-12841328)
chr7 (549-602)||(22349849-22349902)
chr7 (549-602)||(27649009-27649062)
chr7 (549-602)||(28208328-28208381)
chr7 (549-602)||(29650613-29650666)
chr7 (549-602)||(31005434-31005487)
chr7 (549-602)||(31682602-31682655)
chr7 (549-602)||(31869102-31869155)
chr7 (549-602)||(32631793-32631846)
chr7 (549-602)||(33073158-33073211)
chr7 (549-602)||(36101777-36101830)
chr7 (549-602)||(37618174-37618227)
chr7 (549-602)||(39906372-39906425)
[»] scaffold0168 (1 HSPs)
scaffold0168 (549-602)||(28889-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (549-602)||(31697-31750)


Alignment Details
Target: chr2 (Bit Score: 670; Significance: 0; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 670; E-Value: 0
Query Start/End: Original strand, 20 - 870
Target Start/End: Original strand, 32705971 - 32706791
Alignment:
Q  20 gtttggcatttattctcatgttaatgagtgttttatttttcctacgcagatcgagatcatgatgacgtgaaagggtgatctcaattaatataggagagat 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||| |||||||||  |    
T  32705971 gtttggcatttattctcatgttaatgagtgttttatttttcctacgtaga----gatcatgatgacgtgaaagggtgatctcaattactataggaga--t 32706064  T
Q  120 gaagatgtagagctaggattttagtagccggttggttttggagtcagctttcttgtattcctctgtgtagacgctttatatcaagttgaactctattcta 219  Q
    ||||||||||||||||||||||||                 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  32706065 gaagatgtagagctaggattttag-----------------agtcagctttcttttattcctctgtgtagacgttttatatcaagttgaactctattcta 32706147  T
Q  220 aaatttcgattcttaaaatatctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttagctcattgcaagatagtttaagattgt 319  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32706148 aaattacaattcttaaaatatctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttagctcattgcatgatagtttaagattgt 32706247  T
Q  320 cggtgtttaatgttttacctacatatcaatcattgagtgagtggtattcttgtacatgagatcattatttatttaactcagagagctagcttgatgcaat 419  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32706248 cggtgtttaatgttt-acctacatatcaatcattgagtgagtggtattcttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaat 32706346  T
Q  420 ttctagcttcattacatatttaaatcattgaatagaagaagagaagcgtgtttccaacactagttatacaagaagagaagcgtgttcgctttgtgggtgg 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||    
T  32706347 ttctagcttcattacatatttaaatcattgaatagaagaagagaagcgtgtttccaacactagttatacaagaagagaagcgtgttcgcttt----gtgg 32706442  T
Q  520 tgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaatattatttt 619  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706443 tgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaatattatttt 32706542  T
Q  620 agttgtgttggcctgttttgattggcaagatttttccttttgtttattaaatatgctttcattttagctgaatatctgctatggctgctaggatataggc 719  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706543 agttgtgttggcctgttttgatatgcaagatttttccttttgtttatt-aatatgctttcattttagctgaatatctgctatggctgctaggatataggc 32706641  T
Q  720 ttataggatgaattatgtgcagtcatgattagtcaattttctataggctcagtggatattagctccttcctctttattatatttggatttctttgtttgt 819  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706642 ttataggatgaattatgtgcagtcatgattagtcaattttctata-gctcagtggatattagctccttcctctttattatatttggatttctttgtttgt 32706740  T
Q  820 agagattgaaaattgttactgcgctgctttcactatacttttttcctatat 870  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||    
T  32706741 agagattgaaaattgttactgcgctgttttcactattactttttcctatat 32706791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 32718174 - 32718373
Alignment:
Q  23 tggcatttattctcatgttaatgagtgttttatttttcctacgcagatcgagatcatgatgacgtgaaagggtgatctcaattaatataggagagatgaa 122  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||    |||||||| |||||||||||||| ||||  ||  || ||||||  |  |    
T  32718174 tggcatttattctcatgttaatttgtgttttatttctcctacgcaga----gatcatgacgacgtgaaagggtgttctcggttgctacaggagatgtaga 32718269  T
Q  123 gatgtagagctaggattttagtagccggttggttttggagtcagctttcttgtattcctctgtgtagacgctttatatcaagttgaactctattctaaaa 222  Q
    | ||||||||||||| || |||||| ||||| |||||||||| |||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  32718270 gttgtagagctaggagttcagtagctggttgtttttggagtctgcttttctgtattcctctgtgtagacgttttacatcaagttgaactctattctaaaa 32718369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 32724603 - 32724778
Alignment:
Q  47 gtgttttatttttcctacgcagatcgagatcatgatgacgtgaaagggtgatctcaattaatataggagagatgaagatgtagagctaggattttagtag 146  Q
    ||||||||||| |||||||||||    |||||||| |||||||||||||| ||||  ||  || ||||||  |  || ||||||||||||| || |||||    
T  32724603 gtgttttatttctcctacgcaga----gatcatgacgacgtgaaagggtgttctcggttgctacaggagatgtagagttgtagagctaggagttcagtag 32724698  T
Q  147 ccggttggttttggagtcagctttcttgtattcctctgtgtagacgctttatatcaagttgaactctattctaaaatttc 226  Q
    | ||||| |||||||||| |||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  32724699 ctggttgtttttggagtctgcttttctgtattcctctgtgtagacgttttacatcaagttgaactctattctaaaatttc 32724778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 32718577 - 32718651
Alignment:
Q  374 catgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 448  Q
    ||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32718577 catgagatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 32724982 - 32725056
Alignment:
Q  374 catgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 448  Q
    ||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32724982 catgagatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32725056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 32718419 - 32718472
Alignment:
Q  240 tctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttag 293  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  32718419 tctcaccttgtttagtgttagtggtgatagacatcttattcacattttgtttag 32718472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 32724824 - 32724877
Alignment:
Q  240 tctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttag 293  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  32724824 tctcaccttgtttagtgttagtggtgatagacatcttattcacattttgtttag 32724877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 32749254 - 32749306
Alignment:
Q  801 tttggatttctttgtttgtagagattgaaaattgttactgcgctgctttcact 853  Q
    ||||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  32749254 tttggatttctatgtttgtagagattgaaaattggtactatgctgctttcact 32749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 12734929 - 12734982
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||||||||||||    
T  12734929 atttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgt 12734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 602
Target Start/End: Original strand, 14530530 - 14530562
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||||    
T  14530530 ccacttagtgggataatgcttggttgttgttgt 14530562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 28960255 - 28960211
Alignment:
Q  558 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  28960255 atgtagtcgactccatttagtgggataaggcttggttgttgttgt 28960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 572 - 602
Target Start/End: Complemental strand, 8197571 - 8197541
Alignment:
Q  572 acttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||    
T  8197571 acttagtgggataatgcttggttgttgttgt 8197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 572 - 602
Target Start/End: Complemental strand, 8202331 - 8202301
Alignment:
Q  572 acttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||    
T  8202331 acttagtgggataatgcttggttgttgttgt 8202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 12474980 - 12474926
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  12474980 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 12474926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 227418 - 227471
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  227418 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 1404214 - 1404161
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||| |||||| ||| || | ||||||||||||||||||||| |||||||    
T  1404214 atttgatgaatgtagccgactcaatttagtgggataatgcttggttattgttgt 1404161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 2073339 - 2073306
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  2073339 ccacttagtgggataaggcttggttgttgttgta 2073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 3635376 - 3635323
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  3635376 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 4807824 - 4807877
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  4807824 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 9531653 - 9531600
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  9531653 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 9556422 - 9556369
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| ||| ||||||||||||||| | ||||||||||||||||    
T  9556422 atttgatacatgtagccgactccacttagtgggatgaggcttggttgttgttgt 9556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 12520115 - 12520062
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12520115 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Complemental strand, 13474254 - 13474213
Alignment:
Q  562 agtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  13474254 agtcgactccacttagtgggataagacttggttgttgttgta 13474213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 17670697 - 17670750
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  17670697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 17670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 25834907 - 25834960
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25834907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 28508907 - 28508960
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28508907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28508960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 30306261 - 30306314
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30306261 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 599
Target Start/End: Complemental strand, 35715885 - 35715856
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgt 599  Q
    ||||||||||||||||||||||||||||||    
T  35715885 ccacttagtgggataatgcttggttgttgt 35715856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 38328423 - 38328370
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  38328423 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 38328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 38435181 - 38435234
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  38435181 atttgatccatgtagccgatcccacttagtggcataaggcttggttgttgttgt 38435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 38452718 - 38452685
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  38452718 ccacttagtgggataaggcttggttgttgttgta 38452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 41763096 - 41763043
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  41763096 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 43573183 - 43573130
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  43573183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 6e-95; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 513 - 761
Target Start/End: Original strand, 3000932 - 3001177
Alignment:
Q  513 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaata 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||  ||||    
T  3000932 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagccgaccccacttagtgggataaggcttggttgttgttgtactt-caata 3001030  T
Q  613 ttattttagttgtgttggcctgttttgattggcaagatttttccttttgtttattaaatatgctttcattttagctgaatatctgctatggctgctagga 712  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  3001031 ttattttagttgtgttggcctgttttgattggcaagatttttcc-tttgtttatt-aatatgttttcattttagctgaagatctgctatggctgctagga 3001128  T
Q  713 tataggcttataggatgaattatgtgcagtcatgattagtcaattttct 761  Q
    |||| |||||||||||||||||| |||||| | |||||||| |||||||    
T  3001129 tatatgcttataggatgaattatttgcagtgacgattagtctattttct 3001177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 2999292 - 2999461
Alignment:
Q  23 tggcatttattctcatgttaatgagtgttttatttttcctacgcagatcgagatcatgatgacgtgaaagggtgatctcaattaatataggagagatgaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||||||||||||||||||| ||   | ||  ||||||||    
T  2999292 tggcatttattctcatgttaatgagtgttttatttttcctacaca----gagatcatgatgacgtgaaagggtgatctcagttggaacag--gagatgaa 2999385  T
Q  123 gatgtagagctaggattttagtagccggttggttttggagtcagctttcttgtattcctctgtgtagacgctttat 198  Q
    |||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2999386 gatgtagagctacgagtttagtagtcagttggttttggagtcagctttcttgtattcctctgtgtagacgttttat 2999461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 387 - 453
Target Start/End: Original strand, 2999682 - 2999748
Alignment:
Q  387 tttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 453  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2999682 tttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 2999748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 7432420 - 7432467
Alignment:
Q  406 tagcttgatgcaatttctagcttcattacatatttaaatcattgaata 453  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7432420 tagcttgatgcaatttgtagcttcattacatattgaaatcattgaata 7432467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 2999481 - 2999553
Alignment:
Q  228 attcttaaaatatctcaccttgttgagtgttagtgttg-------atagacatcttattcagattttgtttag 293  Q
    ||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||    
T  2999481 attctcaaaatatctcaccttgttgagtgttagtggtgaatggtaatagacatcttattcagattttgtttag 2999553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 515
Target Start/End: Original strand, 3000803 - 3000849
Alignment:
Q  469 gtttccaacactagttatacaagaagagaagcgtgttcgctttgtgg 515  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  3000803 gtttccagaactagttatacaagaagagaagcgcgttcgctttgtgg 3000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 803 - 869
Target Start/End: Original strand, 3001217 - 3001283
Alignment:
Q  803 tggatttctttgtttgtagagattgaaaattgttactgcgctgctttcactatacttttttcctata 869  Q
    |||||||||||||||||||| ||||||||||| ||||| |||| ||||||| |   |||||||||||    
T  3001217 tggatttctttgtttgtagatattgaaaattggtactgtgctgttttcactgttactttttcctata 3001283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 12492437 - 12492384
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||| |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12492437 atttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12492384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 3302073 - 3302127
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  3302073 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 3302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 408547 - 408494
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  408547 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 4496613 - 4496666
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  4496613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4496666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 10124420 - 10124387
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  10124420 ccacttagtgggataaggcttggttgttgttgta 10124387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 10989117 - 10989084
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  10989117 ccacttagtgggataaggcttggttgttgttgta 10989084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 14665941 - 14665994
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  14665941 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 16913914 - 16913881
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  16913914 ccacttagtgggataaggcttggttgttgttgta 16913881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 28976912 - 28976859
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28976912 atttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 29816611 - 29816664
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29816611 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29816664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 32489296 - 32489329
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  32489296 ccacttagtgggataaggcttggttgttgttgta 32489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 3e-35; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 14903523 - 14903439
Alignment:
Q  369 ttgtacatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 453  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14903523 ttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcactgaata 14903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 14903720 - 14903644
Alignment:
Q  150 gttggttttggagtcagctttcttgtattcctctgtgtagacgctttatatcaagttgaactctattctaaaatttc 226  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||| ||||||||||||||    
T  14903720 gttggttttggagtcaactttcttgtattcctctatgtagattatttatatcaagttgaactttattctaaaatttc 14903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 579647 - 579700
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||||||||    
T  579647 atttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgt 579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 5096063 - 5096117
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||| |||||||||||||||| | |||||||||||||||    
T  5096063 atttgatctatgtagccgatcccacttagtgggataaggtttggttgttgttgta 5096117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 9706999 - 9707053
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  9706999 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 9707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 34934883 - 34934829
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  34934883 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 34934829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 12890804 - 12890857
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12890804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 28085605 - 28085658
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28085605 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28085658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 31819060 - 31819113
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||| |||||    
T  31819060 atttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttgt 31819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 34143818 - 34143765
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||    
T  34143818 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgt 34143765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 34156434 - 34156381
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||    
T  34156434 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgt 34156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 48712119 - 48712074
Alignment:
Q  558 atgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  48712119 atgtagttgatcccacttagtgggataatgcttggttgttgttgta 48712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 25191606 - 25191659
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||  ||| |||||||||||||||||||||||||||||||||    
T  25191606 atttgatccatgtagctgatcccacttagtgggataatgcttggttgttgttgt 25191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 602
Target Start/End: Original strand, 52139027 - 52139082
Alignment:
Q  547 ttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  52139027 ttatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 31566214 - 31566160
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  31566214 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 31566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 40106673 - 40106619
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  ||||||| ||  |||||||||||||||| |||||||||||||||||    
T  40106673 atttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttgta 40106619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 22301 - 22354
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  22301 atttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgt 22354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 311362 - 311309
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  311362 atttgatacatgtagccgaccccacttagtgggataaggcttggttgttgttgt 311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 2133665 - 2133612
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||| ||||  |||||||||||||||| ||||||||||||||||    
T  2133665 atttgatccatgtactcgaccccacttagtgggataaggcttggttgttgttgt 2133612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 5169061 - 5169114
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  5169061 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 5169114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 12096758 - 12096705
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12096758 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 15296157 - 15296190
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  15296157 ccacttagtgggataaggcttggttgttgttgta 15296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 27192473 - 27192506
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  27192473 ccacttagtgggataaggcttggttgttgttgta 27192506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 31146928 - 31146981
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| ||| ||||||||||||||||| ||| ||||||||||||    
T  31146928 atttgatccatgtagccgactccacttagtgggataaggctcggttgttgttgt 31146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 43396114 - 43396081
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  43396114 ccacttagtgggataaagcttggttgttgttgta 43396081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 45289123 - 45289090
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  45289123 ccacttagtgggataaggcttggttgttgttgta 45289090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 45933375 - 45933408
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||||||||||||| |||||||    
T  45933375 ccacttagtgggataatgcttggttgatgttgta 45933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 48508464 - 48508517
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  48508464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 48508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 53262370 - 53262423
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  53262370 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 53262423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 54128608 - 54128661
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  54128608 atttgatccatgtaggcgaccccacttagtgggataaggcttggttgttgttgt 54128661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 16807 - 16861
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  16807 atttgatctatgtagccgactccacttagtgggataaggcttggttgttgttgta 16861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 6957827 - 6957880
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||||||||    
T  6957827 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttgt 6957880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 43434153 - 43434206
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||||||||||||    
T  43434153 atttgatccatgtagtcgagcccacttagtgggataaggcttggttgttgttgt 43434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 32339797 - 32339841
Alignment:
Q  558 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||    
T  32339797 atgtagtctattctacttagtgggataaggcttggttgttgttgt 32339841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 436458 - 436511
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  436458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 436511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 601
Target Start/End: Original strand, 4548274 - 4548303
Alignment:
Q  572 acttagtgggataatgcttggttgttgttg 601  Q
    ||||||||||||||||||||||||||||||    
T  4548274 acttagtgggataatgcttggttgttgttg 4548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 21528517 - 21528570
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  21528517 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 21528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 23906329 - 23906296
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  23906329 ccacttagtgggataaggcttggttgttgttgta 23906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 30634159 - 30634106
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30634159 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 31959867 - 31959814
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31959867 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 38789655 - 38789622
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  38789655 ccacttagtgggataaggcttggttgttgttgta 38789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 48622575 - 48622542
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  48622575 ccacttagtgggataaggcttggttgttgttgta 48622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 49416957 - 49416990
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  49416957 ccacttagtgggataaggcttggttgttgttgta 49416990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 50238668 - 50238615
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  50238668 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 50238754 - 50238701
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  50238754 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 50471777 - 50471810
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  50471777 ccacttagtgggataacgcttggttgttgttgta 50471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 52569568 - 52569515
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  52569568 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 55007975 - 55008028
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  55007975 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 55008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 3777313 - 3777260
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||| ||||||||| |||||||||||||||||||||||    
T  3777313 atttgatccatgtagccgatcccacttagtaggataatgcttggttgttgttgt 3777260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 6025834 - 6025887
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||||||||||||||||||||| |||||||||| ||||    
T  6025834 atttgatccatgtagccgattccacttagtgggataatacttggttgtttttgt 6025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 602
Target Start/End: Original strand, 22930643 - 22930675
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||||    
T  22930643 ccacttagtgggataatgcttggttgttgttgt 22930675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 602
Target Start/End: Complemental strand, 31274433 - 31274401
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||||    
T  31274433 ccacttagtgggataatgcttggttgttgttgt 31274401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 602
Target Start/End: Original strand, 43898459 - 43898491
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||||    
T  43898459 ccacttagtgggataatgcttggttgttgttgt 43898491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 569 - 603
Target Start/End: Complemental strand, 36339837 - 36339803
Alignment:
Q  569 tccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||| ||||||||||||||||||||    
T  36339837 tccacttagtgggaaaatgcttggttgttgttgta 36339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 39140744 - 39140794
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 599  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||||||    
T  39140744 atttgattcatgtagccgaccccacttagtgggataatgcttggttgttgt 39140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 49347446 - 49347392
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  49347446 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 49347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 52921309 - 52921363
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  52921309 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 52921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 696499 - 696552
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  696499 atttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgttgt 696552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 1210974 - 1211027
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1210974 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 25979284 - 25979231
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25979284 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 29577481 - 29577534
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29577481 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29577534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 29975449 - 29975482
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  29975449 ccacttagtgggataaggcttggttgttgttgta 29975482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 30202183 - 30202130
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30202183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 32079230 - 32079177
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    ||||||| ||||||| |||  |||||| ||||||||| ||||||||||||||||    
T  32079230 atttgatcgatgtagccgaccccacttggtgggataaggcttggttgttgttgt 32079177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 34444585 - 34444638
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  34444585 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 34444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 40568442 - 40568409
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  40568442 ccacttagtgggataaggcttggttgttgttgta 40568409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 41560458 - 41560511
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  41560458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 42337806 - 42337839
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  42337806 ccacttagtgggataaggcttggttgttgttgta 42337839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 43028840 - 43028807
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||||||||||| |||||||||||||||||    
T  43028840 ccacttagtgggataaggcttggttgttgttgta 43028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 43481851 - 43481798
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43481798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 44941829 - 44941776
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  44941829 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 50636310 - 50636363
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  50636310 atttgatcaatgtagtcgattctacttagcgggataaggcttgattgttgttgt 50636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 50846791 - 50846844
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  ||||||||||||| |||||||||||||||||||    
T  50846791 atttgatctatgtagccgacaccacttagtgggaaaatgcttggttgttgttgt 50846844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000005; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 570 - 602
Target Start/End: Complemental strand, 35643640 - 35643608
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||||||||||||||||||||||||||||    
T  35643640 ccacttagtgggataatgcttggttgttgttgt 35643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 407 - 451
Target Start/End: Original strand, 39851723 - 39851767
Alignment:
Q  407 agcttgatgcaatttctagcttcattacatatttaaatcattgaa 451  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  39851723 agcttgatgtaatttttagcttcattacatagttaaatcattgaa 39851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 44529454 - 44529508
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  44529454 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 44529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 45419464 - 45419518
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 45419518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 599
Target Start/End: Original strand, 1313814 - 1313843
Alignment:
Q  570 ccacttagtgggataatgcttggttgttgt 599  Q
    ||||||||||||||||||||||||||||||    
T  1313814 ccacttagtgggataatgcttggttgttgt 1313843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 1928640 - 1928587
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1928640 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 4955420 - 4955481
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaa 610  Q
    |||||||  |||||||||||  ||||||||| ||||| | ||||||||||||||| ||||||    
T  4955420 atttgatttatgtagtcgatctcacttagtgagataaggtttggttgttgttgtatttaaaa 4955481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 10668550 - 10668497
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    ||||||| ||||||| |||   ||||||||||||||| ||||||||||||||||    
T  10668550 atttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgttgt 10668497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 11523776 - 11523723
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  11523776 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11523723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 12611735 - 12611780
Alignment:
Q  558 atgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||| |||| ||| |||||||||||| |||||||||||||||||    
T  12611735 atgtagccgatcccaattagtgggataaggcttggttgttgttgta 12611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 14742135 - 14742082
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  14742135 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14742082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 25473456 - 25473403
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25473456 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25473403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 603
Target Start/End: Original strand, 29520903 - 29520932
Alignment:
Q  574 ttagtgggataatgcttggttgttgttgta 603  Q
    ||||||||||||||||||||||||||||||    
T  29520903 ttagtgggataatgcttggttgttgttgta 29520932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 32276914 - 32276967
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  32276914 atttgatccatgtagacgaacccacttagtgggataaagcttggttgttgttgt 32276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 36545378 - 36545431
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  36545378 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 36545431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000005; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 12966254 - 12966298
Alignment:
Q  558 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  12966254 atgtagccgatcccacttagtgggataaggcttggttgttgttgt 12966298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 33732061 - 33732115
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| || | |||||||||||||||| |||||||||||||||||    
T  33732061 atttgatccatgtagccggtcccacttagtgggataaggcttggttgttgttgta 33732115  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 40149066 - 40149016
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 599  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||    
T  40149066 atttgatctatgtagccgaatccacttagtgggataaggcttggttgttgt 40149016  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 40979981 - 40979927
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  40979981 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 40979927  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 48919341 - 48919395
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 603  Q
    |||||||  ||||||||||  ||||||| |||||||| |||||||||||||||||    
T  48919341 atttgatccatgtagtcgaccccacttaatgggataaggcttggttgttgttgta 48919395  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 1011275 - 1011328
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1011275 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1011328  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 2885775 - 2885722
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  2885775 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 2885722  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 5418303 - 5418356
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||  ||| |||||||||||| ||||||||||||||||    
T  5418303 atttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgttgt 5418356  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 11594189 - 11594242
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  11594189 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11594242  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 12841328 - 12841275
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12841328 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12841275  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 22349849 - 22349902
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||||||  |||||||||||||||| ||||| ||||||||||    
T  22349849 atttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgttgt 22349902  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 27649009 - 27649062
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  27649009 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 27649062  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 28208381 - 28208328
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28208381 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28208328  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 29650613 - 29650666
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29650613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29650666  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 31005434 - 31005487
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31005434 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31005487  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 31682655 - 31682602
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31682655 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31682602  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 31869155 - 31869102
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31869155 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31869102  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 32631793 - 32631846
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  32631793 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 32631846  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 33073158 - 33073211
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||| ||||    
T  33073158 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttattgt 33073211  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 36101830 - 36101777
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  ||||||| ||  |||||||||||||||| ||||||||||||||||    
T  36101830 atttgatccatgtagttgaccccacttagtgggataaggcttggttgttgttgt 36101777  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 37618174 - 37618227
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  37618174 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 37618227  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 39906425 - 39906372
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  39906425 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39906372  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 28942 - 28889
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28942 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28889  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 31697 - 31750
Alignment:
Q  549 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 602  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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