View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2473_low_23 (Length: 251)
Name: NF2473_low_23
Description: NF2473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2473_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 10426917 - 10426671
Alignment:
| Q |
1 |
ttgagaacacattgtgaatgaagtgtgtattttgatcttgagtcagaaaggtttgttggagaatacgatcactataatgaattgctaatgaaatgtgtat |
100 |
Q |
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| T |
10426917 |
ttgagaacacattgtgaatgaagtgtgtattttgatcttgagttagaaaggtttgttggagaatacgatcactataatgaattgctactgaaatgagtat |
10426818 |
T |
|
| Q |
101 |
gcatccatccaattatccttgaaataatattacatctctcaaatgtatttagactatggtacatttgtactattagatttgtttcaaattttcaacaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
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| T |
10426817 |
gcatccatccaattatccttgaaataatattacatctctcaaatgtatttagactacagtacttttgtactattagatttgtttcaaattttcaacaaaa |
10426718 |
T |
|
| Q |
201 |
ttaattagatagaatcgtatataattttaattgtcgttgggatataa |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10426717 |
ttaattagatagaatcgtatataattttaattgtcgttgggatataa |
10426671 |
T |
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