View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2473_low_34 (Length: 217)
Name: NF2473_low_34
Description: NF2473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2473_low_34 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 1877247 - 1877058
Alignment:
| Q |
12 |
agattatactcgttcccactaacagaaaaatatgataccaaatgaaactagcaatccaccttcgagctaccaacaaaataaaccatcctccacctctcta |
111 |
Q |
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| T |
1877247 |
agattacactcgttcccactaacagaaaaatatgataccaaatgaaactagcaatccaccttcgagctaccaacaaaataaaccatcctccacctctcta |
1877148 |
T |
|
| Q |
112 |
taacctgggcatgcaccaaacacaatcaaatcaacatccgagctaccactcaaaatacctcttttcgctagattgtcgtgggtaggtaac |
201 |
Q |
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| T |
1877147 |
taacctgggcatgcaccaaacacaatcaaatcaacatccgagctaccactcaaaatacctcttttcgctagattgtcgtggataggtaac |
1877058 |
T |
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