View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2474R-Insertion-1 (Length: 970)

Name: NF2474R-Insertion-1
Description: NF2474R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2474R-Insertion-1
NF2474R-Insertion-1
[»] chr1 (42 HSPs)
chr1 (79-970)||(33526236-33527129)
chr1 (12-84)||(43452996-43453068)
chr1 (12-84)||(8250674-8250746)
chr1 (12-84)||(33525994-33526065)
chr1 (12-84)||(38786777-38786849)
chr1 (12-79)||(26476840-26476907)
chr1 (12-84)||(1821460-1821532)
chr1 (12-84)||(25815693-25815765)
chr1 (12-84)||(44963503-44963575)
chr1 (12-73)||(12685760-12685821)
chr1 (12-84)||(5117265-5117337)
chr1 (12-84)||(7075161-7075233)
chr1 (12-84)||(10100344-10100416)
chr1 (12-84)||(26544033-26544105)
chr1 (12-84)||(31651732-31651804)
chr1 (12-84)||(40058798-40058870)
chr1 (15-78)||(23337977-23338040)
chr1 (14-84)||(47912446-47912516)
chr1 (20-84)||(2611912-2611976)
chr1 (12-84)||(5606222-5606294)
chr1 (12-84)||(10648030-10648101)
chr1 (12-84)||(41414368-41414440)
chr1 (12-84)||(44741508-44741580)
chr1 (12-84)||(45299484-45299556)
chr1 (12-84)||(52688696-52688768)
chr1 (17-84)||(5945930-5945997)
chr1 (13-84)||(48312193-48312264)
chr1 (12-83)||(52141884-52141955)
chr1 (17-84)||(52749446-52749513)
chr1 (34-84)||(33730050-33730100)
chr1 (27-84)||(50014407-50014464)
chr1 (12-84)||(10124274-10124346)
chr1 (12-84)||(44452361-44452433)
chr1 (40-84)||(48389232-48389276)
chr1 (38-84)||(4489226-4489272)
chr1 (38-84)||(23393397-23393443)
chr1 (38-84)||(28490325-28490371)
chr1 (38-84)||(31932036-31932082)
chr1 (45-78)||(2138893-2138926)
chr1 (19-84)||(31745906-31745971)
chr1 (15-84)||(40883575-40883644)
chr1 (43-84)||(49903548-49903589)
[»] chr3 (46 HSPs)
chr3 (12-83)||(43398992-43399063)
chr3 (15-84)||(1334123-1334192)
chr3 (12-84)||(36594240-36594312)
chr3 (12-84)||(44821356-44821428)
chr3 (12-84)||(10228551-10228623)
chr3 (12-84)||(16434679-16434751)
chr3 (12-84)||(29793200-29793272)
chr3 (12-84)||(36178958-36179030)
chr3 (12-78)||(29444875-29444941)
chr3 (10-84)||(32961411-32961485)
chr3 (27-84)||(38878315-38878372)
chr3 (12-84)||(900910-900982)
chr3 (12-84)||(1778526-1778598)
chr3 (12-84)||(3817888-3817960)
chr3 (12-80)||(9997702-9997770)
chr3 (12-84)||(12948205-12948277)
chr3 (12-84)||(26759643-26759715)
chr3 (12-84)||(29720560-29720632)
chr3 (12-84)||(42098449-42098521)
chr3 (12-84)||(47339906-47339978)
chr3 (12-79)||(53019998-53020065)
chr3 (38-84)||(4229036-4229082)
chr3 (12-86)||(50673840-50673914)
chr3 (43-84)||(28958852-28958893)
chr3 (12-80)||(10106206-10106274)
chr3 (12-80)||(10232307-10232375)
chr3 (12-84)||(34669773-34669845)
chr3 (44-84)||(43394413-43394453)
chr3 (37-84)||(4465046-4465093)
chr3 (45-84)||(9484761-9484800)
chr3 (45-84)||(12250468-12250507)
chr3 (12-79)||(29588545-29588612)
chr3 (45-84)||(34263559-34263598)
chr3 (45-84)||(34555316-34555355)
chr3 (45-84)||(48927657-48927696)
chr3 (45-84)||(49076281-49076320)
chr3 (37-84)||(49818922-49818969)
chr3 (45-84)||(53274850-53274889)
chr3 (38-84)||(4945699-4945745)
chr3 (12-78)||(29455530-29455596)
chr3 (38-84)||(33462870-33462916)
chr3 (28-78)||(38833551-38833601)
chr3 (13-75)||(43170148-43170210)
chr3 (45-78)||(14750915-14750948)
chr3 (43-84)||(18013323-18013364)
chr3 (37-82)||(31440479-31440524)
[»] chr8 (43 HSPs)
chr8 (15-84)||(8496713-8496782)
chr8 (12-84)||(44039990-44040062)
chr8 (12-84)||(21132752-21132824)
chr8 (12-84)||(30653526-30653598)
chr8 (12-80)||(38036682-38036750)
chr8 (12-82)||(3466453-3466523)
chr8 (19-84)||(27302027-27302092)
chr8 (12-84)||(761715-761787)
chr8 (44-84)||(2026737-2026777)
chr8 (40-84)||(5777406-5777450)
chr8 (12-84)||(14378511-14378583)
chr8 (12-84)||(23547233-23547305)
chr8 (12-84)||(29616150-29616222)
chr8 (28-84)||(36632034-36632090)
chr8 (12-84)||(37094297-37094369)
chr8 (16-84)||(44871496-44871564)
chr8 (12-84)||(44887539-44887611)
chr8 (12-79)||(17523973-17524040)
chr8 (13-84)||(40645847-40645918)
chr8 (38-84)||(4960316-4960362)
chr8 (12-78)||(30464603-30464669)
chr8 (12-77)||(67267-67332)
chr8 (43-84)||(44020904-44020945)
chr8 (15-84)||(44717460-44717529)
chr8 (20-84)||(1645238-1645302)
chr8 (12-84)||(4326943-4327015)
chr8 (12-84)||(14512005-14512077)
chr8 (12-84)||(20671421-20671493)
chr8 (12-84)||(43049093-43049165)
chr8 (45-84)||(15870340-15870379)
chr8 (45-84)||(23437670-23437709)
chr8 (45-84)||(25009309-25009348)
chr8 (45-84)||(29708726-29708765)
chr8 (15-78)||(38842334-38842397)
chr8 (45-84)||(42150007-42150046)
chr8 (38-84)||(14583771-14583817)
chr8 (38-84)||(25866234-25866280)
chr8 (12-78)||(28583126-28583192)
chr8 (12-78)||(43184602-43184668)
chr8 (38-84)||(44362086-44362132)
chr8 (45-78)||(25691454-25691487)
chr8 (43-84)||(29917783-29917824)
chr8 (12-69)||(44947185-44947242)
[»] chr2 (32 HSPs)
chr2 (15-84)||(45036528-45036597)
chr2 (12-84)||(11383871-11383943)
chr2 (12-83)||(2831874-2831945)
chr2 (17-84)||(26436518-26436585)
chr2 (12-84)||(44022433-44022505)
chr2 (17-84)||(18504637-18504704)
chr2 (15-84)||(16125912-16125981)
chr2 (12-80)||(7601223-7601291)
chr2 (12-84)||(8373599-8373671)
chr2 (12-84)||(10333404-10333476)
chr2 (12-84)||(20682807-20682879)
chr2 (17-84)||(1749003-1749070)
chr2 (45-84)||(38963960-38963999)
chr2 (34-84)||(20917775-20917825)
chr2 (38-84)||(22718395-22718441)
chr2 (12-78)||(40471907-40471973)
chr2 (12-78)||(41319750-41319816)
chr2 (12-77)||(4137581-4137646)
chr2 (15-84)||(16333644-16333713)
chr2 (12-84)||(7724436-7724508)
chr2 (44-84)||(12209154-12209194)
chr2 (12-84)||(15177534-15177606)
chr2 (12-84)||(31603243-31603315)
chr2 (12-84)||(41436997-41437069)
chr2 (45-84)||(5096413-5096452)
chr2 (13-68)||(8896452-8896507)
chr2 (17-76)||(9273790-9273849)
chr2 (45-84)||(37987795-37987834)
chr2 (37-84)||(41575727-41575774)
chr2 (38-84)||(6729955-6730001)
chr2 (38-84)||(37317041-37317087)
chr2 (12-78)||(42754181-42754247)
[»] chr7 (29 HSPs)
chr7 (12-84)||(41007784-41007856)
chr7 (15-84)||(9136492-9136561)
chr7 (12-84)||(38069216-38069288)
chr7 (12-82)||(5842285-5842355)
chr7 (12-84)||(3123973-3124045)
chr7 (12-84)||(16806973-16807045)
chr7 (12-84)||(18756754-18756825)
chr7 (12-80)||(25571519-25571587)
chr7 (12-84)||(35693657-35693729)
chr7 (12-84)||(38441978-38442050)
chr7 (12-84)||(48448683-48448755)
chr7 (12-84)||(40818522-40818596)
chr7 (43-84)||(4620229-4620270)
chr7 (12-84)||(9173163-9173235)
chr7 (12-84)||(19817500-19817572)
chr7 (12-84)||(46242305-46242377)
chr7 (34-84)||(25273866-25273916)
chr7 (12-74)||(26651075-26651137)
chr7 (19-77)||(32222724-32222782)
chr7 (39-84)||(14543638-14543683)
chr7 (15-84)||(31496477-31496545)
chr7 (15-84)||(33376939-33377008)
chr7 (39-84)||(38850867-38850912)
chr7 (12-84)||(32345610-32345682)
chr7 (12-84)||(36820041-36820113)
chr7 (12-84)||(47713259-47713331)
chr7 (45-84)||(27621155-27621194)
chr7 (43-84)||(32972193-32972234)
chr7 (13-78)||(41844941-41845006)
[»] chr6 (23 HSPs)
chr6 (12-84)||(12677145-12677217)
chr6 (13-84)||(16661433-16661504)
chr6 (12-84)||(10105976-10106048)
chr6 (12-84)||(2141733-2141805)
chr6 (12-84)||(6188487-6188559)
chr6 (12-78)||(2667156-2667222)
chr6 (12-84)||(6142338-6142410)
chr6 (12-84)||(16969544-16969616)
chr6 (12-84)||(17496159-17496231)
chr6 (12-84)||(29514858-29514930)
chr6 (38-84)||(26210912-26210958)
chr6 (12-84)||(30699426-30699499)
chr6 (12-84)||(995728-995800)
chr6 (12-84)||(2397935-2398007)
chr6 (12-84)||(2656501-2656573)
chr6 (12-76)||(4889957-4890021)
chr6 (12-84)||(31948474-31948545)
chr6 (12-84)||(35117441-35117513)
chr6 (45-84)||(2913062-2913101)
chr6 (13-84)||(10109243-10109314)
chr6 (45-84)||(24825330-24825369)
chr6 (45-84)||(32541341-32541380)
chr6 (12-66)||(33347968-33348022)
[»] chr4 (40 HSPs)
chr4 (12-84)||(17492832-17492904)
chr4 (18-84)||(1613050-1613116)
chr4 (12-84)||(29821215-29821287)
chr4 (12-80)||(24505680-24505748)
chr4 (16-84)||(30386996-30387064)
chr4 (12-84)||(37164182-37164254)
chr4 (12-84)||(39260517-39260589)
chr4 (12-84)||(47833970-47834042)
chr4 (12-84)||(55631701-55631773)
chr4 (27-84)||(6520600-6520657)
chr4 (12-84)||(1615704-1615776)
chr4 (12-80)||(2805997-2806065)
chr4 (12-84)||(8525242-8525314)
chr4 (12-84)||(28914533-28914605)
chr4 (12-84)||(37588356-37588428)
chr4 (12-84)||(48380921-48380993)
chr4 (12-84)||(51306060-51306132)
chr4 (17-84)||(54802889-54802956)
chr4 (37-83)||(1981232-1981278)
chr4 (12-78)||(39332656-39332722)
chr4 (15-84)||(39171123-39171192)
chr4 (15-84)||(42185439-42185508)
chr4 (43-84)||(52818547-52818588)
chr4 (12-84)||(3708418-3708490)
chr4 (12-84)||(43447330-43447402)
chr4 (12-84)||(50685085-50685157)
chr4 (45-84)||(10385013-10385052)
chr4 (12-79)||(11260872-11260939)
chr4 (37-84)||(31657208-31657255)
chr4 (45-84)||(40411467-40411506)
chr4 (17-84)||(42862124-42862191)
chr4 (37-84)||(44210314-44210361)
chr4 (38-84)||(1377973-1378019)
chr4 (38-84)||(28898923-28898969)
chr4 (38-84)||(28988246-28988292)
chr4 (46-84)||(37667634-37667672)
chr4 (12-78)||(48652643-48652709)
chr4 (12-77)||(4271840-4271905)
chr4 (45-78)||(43047558-43047591)
chr4 (12-84)||(46608378-46608451)
[»] scaffold0172 (1 HSPs)
scaffold0172 (12-80)||(19562-19630)
[»] chr5 (45 HSPs)
chr5 (17-84)||(8627300-8627368)
chr5 (15-84)||(1918660-1918729)
chr5 (15-84)||(14639545-14639614)
chr5 (32-84)||(2551474-2551526)
chr5 (12-84)||(9936715-9936787)
chr5 (12-84)||(14633172-14633244)
chr5 (12-84)||(26801928-26802000)
chr5 (12-84)||(26809478-26809550)
chr5 (12-84)||(41410487-41410559)
chr5 (15-84)||(6734947-6735016)
chr5 (15-84)||(30788370-30788439)
chr5 (12-84)||(1831515-1831587)
chr5 (12-84)||(2799797-2799869)
chr5 (12-84)||(2805963-2806035)
chr5 (34-78)||(13548384-13548428)
chr5 (12-84)||(20023025-20023097)
chr5 (12-80)||(26824505-26824573)
chr5 (12-80)||(27674386-27674454)
chr5 (12-84)||(27675705-27675777)
chr5 (12-84)||(39035725-39035797)
chr5 (12-84)||(39925369-39925441)
chr5 (12-84)||(40316982-40317054)
chr5 (17-84)||(39104111-39104178)
chr5 (38-84)||(14140083-14140129)
chr5 (12-86)||(20040242-20040316)
chr5 (30-84)||(21031799-21031853)
chr5 (12-84)||(1780972-1781044)
chr5 (16-80)||(1831233-1831297)
chr5 (44-84)||(14355664-14355704)
chr5 (12-84)||(30721512-30721584)
chr5 (12-84)||(32110469-32110541)
chr5 (16-80)||(40316700-40316764)
chr5 (12-80)||(40796899-40796967)
chr5 (16-80)||(41410777-41410841)
chr5 (37-84)||(10465147-10465194)
chr5 (45-84)||(14057873-14057912)
chr5 (45-84)||(30211601-30211640)
chr5 (17-84)||(30351903-30351970)
chr5 (14-84)||(967359-967429)
chr5 (12-78)||(14607385-14607451)
chr5 (12-78)||(33402418-33402484)
chr5 (45-78)||(1098346-1098379)
chr5 (12-77)||(19344526-19344591)
chr5 (15-84)||(31191007-31191076)
chr5 (27-84)||(41042679-41042736)
[»] scaffold0500 (1 HSPs)
scaffold0500 (12-73)||(504-565)
[»] scaffold0289 (1 HSPs)
scaffold0289 (15-84)||(9288-9357)
[»] scaffold0221 (1 HSPs)
scaffold0221 (12-84)||(5541-5613)
[»] scaffold0001 (1 HSPs)
scaffold0001 (15-84)||(184131-184200)
[»] scaffold0195 (1 HSPs)
scaffold0195 (12-80)||(72-140)
[»] scaffold1248 (1 HSPs)
scaffold1248 (34-84)||(1305-1355)
[»] scaffold0952 (1 HSPs)
scaffold0952 (34-84)||(958-1008)
[»] scaffold0281 (1 HSPs)
scaffold0281 (38-84)||(13270-13316)
[»] scaffold0283 (1 HSPs)
scaffold0283 (12-69)||(3163-3220)


Alignment Details
Target: chr1 (Bit Score: 727; Significance: 0; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 727; E-Value: 0
Query Start/End: Original strand, 79 - 970
Target Start/End: Original strand, 33526236 - 33527129
Alignment:
Q  79 agaaaagagtaacggtatcttcttaaaagagaaagtatcttgttataatgaaaaaagcatctaacaaggcatgcacgtcgacagaggtcgactaaatgaa 178  Q
    |||||| || ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  33526236 agaaaaaagcaacagtatcttcttaaaagagagagtatcttgttataatgaaaaaggcatctaacaaggcatgcatgtcgacagaggttgactaaatgaa 33526335  T
Q  179 agaccaaaatcctggttggagatagcaaaacgtggcacattattaagtacgcgtgtgaatgaatgagcacagaacactctcaacactttaactctttctt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33526336 agaccaaaatcctggttggagatagcaaaacgtggcacattattaagtacgcgtgtgaatgaatgaacacagaacactctcaacactttaactctttctt 33526435  T
Q  279 gtcttgtctttttcttcttctactataacacaacacagtaatctc--attttttccaaaaatctcttccacactttt-ttcatggcttccctcaatctcc 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33526436 gtcttgtctttttcttcttctactataacacaacacagtaatctctcattttttccaaaaatctcttccacactttttttcatggcttccctcaatctcc 33526535  T
Q  376 ttcttcacccctcaacttctctctctcaccccctactaccattttcttcttcatgttcttgtttctttccaagaaccaacagcatcaatgttcttactcc 475  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33526536 ttcttcacccctcaacttctctctctcaccccctactaccattttcttcttcatgttcttgtttctttccaagaaccaacagcatcaatgttcttactcc 33526635  T
Q  476 aaagggtaaacatatcaagccttcatcccttattgtaaaagctgctgctgaagctgatatttcaatctctggctctattccaattccttctaatcctttt 575  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33526636 aaagggtaaacatatcaagccttcatcccttattgtaaaagctgctgctgaagctgatatttcaatctctggctctattccaattccttctaatcctttt 33526735  T
Q  576 gattctacttcccccttgaagttcaatcttctggtcagnnnnnnnnnnnnnnnnnnnnnncattagcttagcctctttggatgttgatttttcttagctt 675  Q
    ||||||||||||||||||||||||||||||||||||||                      |||||||||||| |||||||||||||||||||||||||||    
T  33526736 gattctacttcccccttgaagttcaatcttctggtcag--ttttttttctttctttttttcattagcttagcttctttggatgttgatttttcttagctt 33526833  T
Q  676 ttattacacttgtgtatcattgcataatagaaattgggaaaatgattggggaagtagtaatagattactgcctttgcaaaaggaaaatatgttggtatag 775  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33526834 ttattacacttgtgtatgattgcataatagaaattgggaaaatgattggggaagtagtaatagattactgcctttgcaaaaggaaaatatgtaggtatag 33526933  T
Q  776 gtcacagtcacatgttgaatttatgtatttgaagttctttgttatatcatacacatgtt-agaaaaactaaacagttctagaggaatcttttgtgatttt 874  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  33526934 gtcacagtcacatgttgaatttatgtatttgaagttctttgttatatcatacacatgttaaaaaaaactaaacagttctaggggaatcttttgtgatttt 33527033  T
Q  875 atgtaaggtttctgaatagttttagccttagcaattggaagcattattagggataaacaacttga-ggccaattgggattaccttatttgagcttat 970  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  33527034 atgtaaggtttctg-atagttttagccttagcaattggaagcattattagggataaacaacttgagggccaatttggattaccttatttgagcttat 33527129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 43452996 - 43453068
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  43452996 gacacagttgaccttattacgcatatcaatgcataattttgagtttaaatatcttgaataatatattagaaaa 43453068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 8250674 - 8250746
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||| ||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  8250674 gacacagttgacctaattacgtataccaatgcataattttgagtttaaatatcttgaataatatattagaaaa 8250746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 33525994 - 33526065
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  33525994 gacacagttgaccttattatatataccaatacataattttgagtttaaatat-ttgaataatatattagaaaa 33526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 38786777 - 38786849
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38786777 gacacaattgaccctattacgcatatcaatacataattttgagtttaaatatctttaataatatattagaaaa 38786849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 26476840 - 26476907
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatta 79  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||||    
T  26476840 gacacagttgaccttattacgcatgtcaatacataattttgagtttaaatatcttgaataatatatta 26476907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 1821460 - 1821532
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||| |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  1821460 gacacagttgacccaattacgtataccaatgcataattttgagcttaaatatcttgaataatatattagaaaa 1821532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 25815765 - 25815693
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |||||||| ||| ||||| |||||||||||| ||||||||||| |||| ||||||||||||    
T  25815765 gacacagttgatcttattacgtatctcaatgcataattttgaggttaaatatcttgaatagtatattagaaaa 25815693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 44963503 - 44963575
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||||||  || ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  44963503 gacatagttgaccttattacgcatgtcaatacataactttgagcttaaatatcttgaataatatattagaaaa 44963575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 12685760 - 12685821
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataat 73  Q
    ||||||||||||||||||||| || ||||| |||||||||||| ||||||||||| ||||||    
T  12685760 gacacagttgaccttattacacatgtcaatgcataattttgagcttaaatatcttgaataat 12685821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 5117265 - 5117337
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| ||||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  5117265 gacacagttgaacttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaa 5117337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 7075161 - 7075233
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  7075161 gacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 7075233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 10100344 - 10100416
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||| |||||  |||||||| | ||||||||||||||||||| || ||||||||||| |||||    
T  10100344 gacacagttgacctaattacgcatatcaatgcgtaattttgagtttaaatattttgaataatatattggaaaa 10100416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 26544105 - 26544033
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  26544105 gacacagttgacccgattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 26544033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 31651732 - 31651804
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  ||| |||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  31651732 gacacagttgaccctattacgcataccaatgcataattttgagcttaaatatcttgaataatatattataaaa 31651804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 40058798 - 40058870
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| ||||| ||||||||||||||  || |||||||||||||||||    
T  40058798 gacacagttgaccttattacgcatgtcaatgcataactttgagtttaaatactttgaataatatattagaaaa 40058870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 23338040 - 23337977
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||| ||||||  || ||||| |||||||||||||||||||||||| |||||||||||    
T  23338040 acagttgaccatattacgcatgtcaatgcataattttgagtttaaatatcttgaataatatatt 23337977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 47912516 - 47912446
Alignment:
Q  14 cacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| ||||||||||||| ||| ||||| |||||||||||| |||||||| || |||||||||||| ||||    
T  47912516 cacaattgaccttattacgtatgtcaatgcataattttgagcttaaatattttgaataatatattataaaa 47912446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 2611912 - 2611976
Alignment:
Q  20 tgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| ||| || |||||| ||||||||||||||||||||||||||| || ||||||||| ||||    
T  2611912 tgaccctatcacgtatatcgatacataattttgagtttaaatatcttgaaaaatatattaaaaaa 2611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 5606222 - 5606294
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  5606222 gacacagttgacccaattacgcataccaatgcttaattttgagtttaaatatcttgaataatatattggaaaa 5606294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 10648030 - 10648101
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||| ||| | | |  ||||||||||||||||||||||| |||||||||||| ||||    
T  10648030 gacacagttgaccttattacgtatttta-tgtataattttgagtttaaatatcttgaataatatattaaaaaa 10648101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 41414440 - 41414368
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   ||||| ||| ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  41414440 gacacagttgactcaattacgtatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 41414368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 44741580 - 44741508
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |  |||||  |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  44741580 gacacagttgatccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 44741508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 45299556 - 45299484
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  45299556 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 45299484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 52688768 - 52688696
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||||||||||| | || ||||| ||||| |||||| |||||||| || |||||||||||||||||    
T  52688768 gacacaattgaccttattatacatgtcaatgcataactttgagcttaaatatattgaataatatattagaaaa 52688696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 5945997 - 5945930
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||| |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  5945997 agttgacctaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 5945930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 48312264 - 48312193
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| |||||||||   || ||||| |||||||||||| |||||||| || |||||||||||||||||    
T  48312264 acacagtttaccttattatgcatgtcaatgcataattttgagcttaaatattttgaataatatattagaaaa 48312193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 52141884 - 52141955
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaa 83  Q
    |||||||||||||||||||   ||  |||| |||| ||||||||| ||||||||| ||||||||||||||||    
T  52141884 gacacagttgaccttattatgcatgccaatgcatatttttgagttgaaatatcttgaataatatattagaaa 52141955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 52749513 - 52749446
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||  |||||| ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  52749513 agttgacccaattacacataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 52749446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 33730050 - 33730100
Alignment:
Q  34 atatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||| ||||    
T  33730050 atatcaatgcataattttaagtttaaatatcttgaataatatattaaaaaa 33730100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 50014407 - 50014464
Alignment:
Q  27 attacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||  |||| ||||||| |||||||||||||||| |||||||| ||||||||    
T  50014407 attacatattccaatgcataattctgagtttaaatatcttgaataatatgttagaaaa 50014464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 10124346 - 10124274
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   |||||  |||||||| | ||||||||||||||||||| || ||||||||||| |||||    
T  10124346 gacacagttgactcaattacgcatatcaatgcgtaattttgagtttaaatattttgaataatatattggaaaa 10124274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 44452433 - 44452361
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||||||||||||  || | ||| |||||||||||| |||||||||||  ||||||||||| ||||    
T  44452433 gacacaattgaccttattacgcatgttaatgcataattttgagcttaaatatcttggataatatattaaaaaa 44452361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 48389276 - 48389232
Alignment:
Q  40 atacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  48389276 atacataattttgagcttaaatatcttgaataatatgttagaaaa 48389232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 4489272 - 4489226
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  4489272 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 4489226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 23393443 - 23393397
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  23393443 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 23393397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 28490371 - 28490325
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  28490371 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 28490325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 31932036 - 31932082
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||| ||||||||||| |||||||| ||| ||||    
T  31932036 caatacataattttgagcttaaatatcttgaataatatgttaaaaaa 31932082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 2138893 - 2138926
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||||||||||| |||||||||||    
T  2138893 taattttgagtttaaatatcttgaataatatatt 2138926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 31745971 - 31745906
Alignment:
Q  19 ttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||  || ||||| ||||||||| || ||||||||||| |||||||||||| ||||    
T  31745971 ttgactttattacgaatgtcaatccataatttttaggttaaatatcttgaataatatattataaaa 31745906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 40883644 - 40883575
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| | ||||||  |||| ||| |||||||||||  ||||||||||| |||||||||||| ||||    
T  40883644 acagttgatcctattacgcatattaatgcataattttgaacttaaatatcttgaataatatattaaaaaa 40883575  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 49903548 - 49903589
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| ||| ||||||| |||||||||||||||||    
T  49903548 cataattttgagcttacatatcttgaataatatattagaaaa 49903589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 1e-22; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 43399063 - 43398992
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaa 83  Q
    ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43399063 gacacagttgatcctattacgcatatcaatacataattttgagtttaaatatcttaaataatatattagaaa 43398992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 1334123 - 1334192
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  1334123 acagttgaccttattacacatgtcaatgcataattttgagcttaaatatcttaaataatatattagaaaa 1334192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 36594240 - 36594312
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  36594240 gacacagttgaccttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattagaaaa 36594312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 44821356 - 44821428
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| ||||||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  44821356 gacacaattgaccttattacatatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaa 44821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 10228551 - 10228623
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||||||    
T  10228551 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagaaaa 10228623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 16434679 - 16434751
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  16434679 gacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 16434751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29793200 - 29793272
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||| |||  |||||  ||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  29793200 gacacagttaacccaattacgcataccaatgcataattttgagtttaaatatcttaaataatatattggaaaa 29793272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 36178958 - 36179030
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |  ||||| ||||| ||| | |||||||||||||||||||||| |||||||||||||||||    
T  36178958 gacacagttgatccaattacgtatattaatgcgtaattttgagtttaaatatcttgaataatatattagaaaa 36179030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 29444875 - 29444941
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||||||| |||| | ||||||||| |||||||||||| |||||||||||    
T  29444875 gacacagttgaccaaattacatataccaatgcgtaattttgaatttaaatatcttgaataatatatt 29444941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 32961485 - 32961411
Alignment:
Q  10 acgacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||| ||||||  || ||||| ||||||||||||||||||||| || |||||||| ||||||||    
T  32961485 acgatacagttgaccctattacgcatgtcaatgcataattttgagtttaaatattttgaataatatgttagaaaa 32961411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 38878315 - 38878372
Alignment:
Q  27 attacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| ||||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  38878315 attacgtatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 38878372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 900910 - 900982
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  900910 gacacagttgaccaaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 900982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 1778598 - 1778526
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   ||||| |||  |||| |||||||||||| |||||||||||||||||||| ||||||||    
T  1778598 gacacagttgactccattacgtattccaatgcataattttgagcttaaatatcttaaataatatgttagaaaa 1778526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 3817960 - 3817888
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| | ||||  ||  |||| |||||||||||||||||||||||| |||| ||||||||||||    
T  3817960 gacacagttgaccgtgttacgcatgacaatgcataattttgagtttaaatatcttgaatagtatattagaaaa 3817888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 9997702 - 9997770
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||    
T  9997702 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattag 9997770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 12948277 - 12948205
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |  |||||  ||| |||| |||||||||||||||||||||||| ||||||||||| |||||    
T  12948277 gacacagttgatccaattacgcataccaatgcataattttgagtttaaatatcttgaataatatattggaaaa 12948205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 26759715 - 26759643
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||  |||||   || |||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  26759715 gacacagttgactctattatgcatttcaatatataattttgagtttaaatatcttgaataatatgttagaaaa 26759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 29720632 - 29720560
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  29720632 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 29720560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 42098449 - 42098521
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  42098449 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 42098521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 47339906 - 47339978
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| | ||||  ||  |||| |||||||||||||||||||||||| |||| ||||||||||||    
T  47339906 gacacagttgaccgtgttacgcatgacaatgcataattttgagtttaaatatcttgaatagtatattagaaaa 47339978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 53020065 - 53019998
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatta 79  Q
    ||||||||||||||||||||  || ||||| ||||| ||||||  |||||||||| ||||||||||||    
T  53020065 gacacagttgaccttattacgcatgtcaatgcataactttgagactaaatatcttgaataatatatta 53019998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 4229036 - 4229082
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||    
T  4229036 caatgcataattttgagtttaaatatcttgaataatatgttagaaaa 4229082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 50673914 - 50673840
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaaga 86  Q
    ||||||||||| |  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||||    
T  50673914 gacacagttgatccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaga 50673840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 28958852 - 28958893
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  28958852 cataattttgagtttaaatatcttgaataatatgttagaaaa 28958893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 10106206 - 10106274
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||||||||||| |||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||    
T  10106206 gacacagttgactttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattag 10106274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 10232307 - 10232375
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||||||||||| |||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||    
T  10232307 gacacagttgactttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattag 10232375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 34669845 - 34669773
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |  |||| | |||||||| | |||||||||||||||||||||| ||||| ||||| |||||    
T  34669845 gacacagttgatccaattatacatatcaatgcgtaattttgagtttaaatatcttgaataacatattggaaaa 34669773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 43394413 - 43394453
Alignment:
Q  44 ataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  43394413 ataattttgagcttaaatatcttgaataatatattagaaaa 43394453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 4465093 - 4465046
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  4465093 tcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 4465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 9484800 - 9484761
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  9484800 taattttgagtttaaatatcttgaataatatattggaaaa 9484761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 12250507 - 12250468
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  12250507 taattttgagtttaaatatcttgaataatatattggaaaa 12250468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 29588612 - 29588545
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatta 79  Q
    ||||||||||||  |||||  ||||  ||| |||||||||||| ||||||||||| ||||||||||||    
T  29588612 gacacagttgactctattatgtatactaatgcataattttgagcttaaatatcttgaataatatatta 29588545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 34263559 - 34263598
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  34263559 taattttgagtttaaatatcttgaataatatattggaaaa 34263598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 34555355 - 34555316
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  34555355 taattttgagtttaaatatcttgaataatatattggaaaa 34555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 48927657 - 48927696
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  48927657 taattttgagtttaaatatcttgaataatatattggaaaa 48927696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 49076281 - 49076320
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  49076281 taattttgagtttaaatatcttgaataatatattggaaaa 49076320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 49818969 - 49818922
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  49818969 tcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 49818922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 53274850 - 53274889
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  53274850 taattttgagtttaaatatcttgaataatatattggaaaa 53274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 4945699 - 4945745
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  4945699 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 4945745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 29455530 - 29455596
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||   ||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  29455530 gacacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 29455596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 33462916 - 33462870
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||||| ||||||    
T  33462916 caatgcataattttgagcttaaatatcttgaataatatataagaaaa 33462870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 38833551 - 38833601
Alignment:
Q  28 ttacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    ||||| |||| ||| | |||||||||||||||||||||| |||||||||||    
T  38833551 ttacacatattaatgcgtaattttgagtttaaatatcttgaataatatatt 38833601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 43170210 - 43170148
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatat 75  Q
    ||||| |||||  |||||| |||| |||| |||||||||||||||| ||||||| ||||||||    
T  43170210 acacaattgactctattacgtataccaatgcataattttgagtttagatatcttgaataatat 43170148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 14750915 - 14750948
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||||||||||| |||||||||||    
T  14750915 taattttgagtttaaatatcttgaataatatatt 14750948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 18013323 - 18013364
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||| ||||||||||| |||||||||||||||||    
T  18013323 cataatttagagcttaaatatcttgaataatatattagaaaa 18013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 31440479 - 31440524
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaa 82  Q
    ||||| |||||||| ||| ||||||||||| |||||||||||||||    
T  31440479 tcaatgcataatttagagcttaaatatcttgaataatatattagaa 31440524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 4e-19; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 8496713 - 8496782
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||| |||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  8496713 acagttgaccctattacgtatatcaatgcataattttgagcttaaatatcttgaataatatattagaaaa 8496782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 44040062 - 44039990
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  ||| |||| |||||||||||||||||||||||| |||||||||||| ||||    
T  44040062 gacacagttgaccctattacgcataccaatgcataattttgagtttaaatatcttgaataatatattataaaa 44039990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 21132752 - 21132824
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| |||||||||||||||||||||||| ||||||||||| |||||    
T  21132752 gacacagttgacccaattacgcataccaatgcataattttgagtttaaatatcttgaataatatattggaaaa 21132824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 30653598 - 30653526
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| ||||||||||||||   || ||||| ||||||||| || |||||||||||||||||||||||||||||    
T  30653598 gacatagttgaccttattaagcatgtcaatgcataattttcagattaaatatcttaaataatatattagaaaa 30653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 38036682 - 38036750
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  38036682 gacacagttgaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattag 38036750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 3466523 - 3466453
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaa 82  Q
    |||||||||| ||||||||  ||| ||||| ||||| |||||| ||||||||||| |||||||||||||||    
T  3466523 gacacagttggccttattatgtatgtcaatgcataactttgagcttaaatatcttgaataatatattagaa 3466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 27302092 - 27302027
Alignment:
Q  19 ttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| ||||||  || ||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  27302092 ttgaccctattacgcatgtcaatgcataattttgagtttaaatatcttgaataatatattataaaa 27302027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 761787 - 761715
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  761787 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 761715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 2026777 - 2026737
Alignment:
Q  44 ataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  2026777 ataattttaagtttaaatatcttaaataatatattagaaaa 2026737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 5777406 - 5777450
Alignment:
Q  40 atacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||||||||||||| |||||||||||||||||    
T  5777406 atacgtaattttgagtttaaatatcttgaataatatattagaaaa 5777450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 14378511 - 14378583
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  14378511 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 14378583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 23547305 - 23547233
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| | |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  23547305 gacacagttgacttaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 23547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29616150 - 29616222
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| | ||||||  ||| | || |||||||||||| ||||||||||| |||||||||||||||||    
T  29616150 gacacagttgatcctattacgcataccgatgcataattttgagcttaaatatcttgaataatatattagaaaa 29616222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 36632034 - 36632090
Alignment:
Q  28 ttacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| || ||||||||||||||||||| |||||||||| |||||||||||| ||||    
T  36632034 ttacacatgtcaatacataattttgagtgtaaatatcttgaataatatattaaaaaa 36632090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 37094369 - 37094297
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   ||||| ||| ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  37094369 gacacagttgactccattacgtatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 37094297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 44871564 - 44871496
Alignment:
Q  16 cagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||| ||||| | || ||||| ||||||||||||||||||||| || |||||||| ||||||||    
T  44871564 cagttgaccctattatacatgtcaatgcataattttgagtttaaatattttgaataatatgttagaaaa 44871496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 44887539 - 44887611
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  ||| |||| ||||||||||||  |||||||||| |||||||||||| ||||    
T  44887539 gacacagttgaccctattacgcataccaatgcataattttgagcataaatatcttgaataatatattataaaa 44887611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 17524040 - 17523973
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatta 79  Q
    |||||| |||| ||||||||  || ||||| |||||||||||| ||||||||||| ||||||||||||    
T  17524040 gacacaattgatcttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatatta 17523973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 40645918 - 40645847
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||||  || ||||| ||||| || ||| ||||||||||| |||||||||||||||||    
T  40645918 acacaattgaccttattacgcatgtcaatgcataacttcgagcttaaatatcttgaataatatattagaaaa 40645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 4960362 - 4960316
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  4960362 caatacataattttgagcttaaatatcttgaataatatgttagaaaa 4960316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 30464669 - 30464603
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  ||||||||   |||||||||||||||||||||| |||||||||||    
T  30464669 gacacagttgaccaaattacgcatatcaatgtgtaattttgagtttaaatatcttgaataatatatt 30464603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 67332 - 67267
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatat 77  Q
    |||| |||||||||||||||  || ||||| ||||| |||||| ||||||||||| ||||||||||    
T  67332 gacatagttgaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatat 67267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 44020904 - 44020945
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  44020904 cataactttgagtttaaatatcttgaataatatattagaaaa 44020945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 44717529 - 44717460
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||||  || ||||| |||||||||||| ||||||||| | |||||||||||| ||||    
T  44717529 acagttgatcttattacgcatgtcaattcataattttgagcttaaatatcatgaataatatattataaaa 44717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 1645238 - 1645302
Alignment:
Q  20 tgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||  || ||||| ||||| |||||| ||||||||||| |||||| ||||||||||    
T  1645238 tgaccttattacgcatgtcaatgcataagtttgagcttaaatatcttgaataatgtattagaaaa 1645302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 4326943 - 4327015
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||||||||   ||||||||||||||||||| || ||||||||||| |||||    
T  4326943 gacacagttgacccaattacgcatatcaatgtgtaattttgagtttaaatattttgaataatatattggaaaa 4327015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 14512077 - 14512005
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||| |||||||   || ||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  14512077 gacacaattgatcttattatgcatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaa 14512005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 20671493 - 20671421
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| |||  ||||||| |||||||| || ||| |||||||||||||    
T  20671493 gacacagttgaccttattacgcatgtcaatgcatggttttgagcttaaatattttgaattatatattagaaaa 20671421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 43049093 - 43049165
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   |||||  || ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  43049093 gacacagttgactccattacgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 43049165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 15870379 - 15870340
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  15870379 taattttgagtttaaatatcttgaataatatattggaaaa 15870340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 23437670 - 23437709
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  23437670 taattttgagtttaaatatcttgaataatatattggaaaa 23437709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 25009348 - 25009309
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  25009348 taattttgagtttaaatatcttgaataatatattggaaaa 25009309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 29708765 - 29708726
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  29708765 taattttgagtttaaatatcttgaataatatattggaaaa 29708726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 38842397 - 38842334
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    ||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  38842397 acagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 38842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 42150007 - 42150046
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  42150007 taattttgagtttaaatatcttgaataatatattggaaaa 42150046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 14583771 - 14583817
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  14583771 caatgcataattttgagcttaaatatctttaataatatgttagaaaa 14583817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 25866280 - 25866234
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  25866280 caattcataattttgagcttaaatatcttgaataatatgttagaaaa 25866234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 28583126 - 28583192
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||   ||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  28583126 gacacagttgacccagttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 28583192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 43184602 - 43184668
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    ||||||||||| |   |||| |||||||||   |||||||||||||||||||||| |||||||||||    
T  43184602 gacacagttgatccagttacgtatatcaatgtgtaattttgagtttaaatatcttgaataatatatt 43184668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 44362132 - 44362086
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  44362132 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 44362086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 25691454 - 25691487
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||||||||||| |||||||||||    
T  25691454 taattttgagtttaaatatcttgaataatatatt 25691487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 29917783 - 29917824
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||  ||||||||||| |||||||||||||||||    
T  29917783 cataattttgatcttaaatatcttgaataatatattagaaaa 29917824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 44947242 - 44947185
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaa 69  Q
    ||||||||||||| ||||||  ||| |||| |||||||||||| |||||||| |||||    
T  44947242 gacacagttgaccatattacgcataccaatgcataattttgagcttaaatatattaaa 44947185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 4e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 45036597 - 45036528
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||| |||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  45036597 acagttgaccctattacgtataccaatgcataattttaagtttaaatatcttaaataatatattagaaaa 45036528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 11383871 - 11383943
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||   ||| |||  |||||||||||||||||||||||| |||||||||||||||||    
T  11383871 gacacagttgaccttattatccataccaacgcataattttgagtttaaatatcttgaataatatattagaaaa 11383943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 2831945 - 2831874
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaa 83  Q
    ||||||||||||||||||||  || | ||| |||||||||||| ||||||||||| ||||||||||||||||    
T  2831945 gacacagttgaccttattacgcatgttaatgcataattttgagcttaaatatcttgaataatatattagaaa 2831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 26436518 - 26436585
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||  || ||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  26436518 agttgaccttattacgcatgtcaatgcataactttgagtttaaatatcttgaataatatattagaaaa 26436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 44022505 - 44022433
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| |||||||||||  |||||||| || |||||||||||||||||    
T  44022505 gacacagttgaccttattacgcatgtcaatgcataattttgaacttaaatatattgaataatatattagaaaa 44022433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 18504704 - 18504637
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| |||||||||| ||||||    
T  18504704 agttgaccttattacgtatgtcaatgcataatttcgagcttaaatatcttgaataatatatgagaaaa 18504637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 16125912 - 16125981
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |||||  |||||||| |||||||||||  ||||||||||| ||||||||||| |||||    
T  16125912 acagttgacctaattacgcatatcaatgcataattttgaccttaaatatcttgaataatatatttgaaaa 16125981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 7601223 - 7601291
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||||||||||| |||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  7601223 gacacagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattag 7601291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 8373671 - 8373599
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||||||||   ||||||| |||||||||||||| ||||||||||| |||||    
T  8373671 gacacagttgacccaattacgtatatcaatgtgtaattttaagtttaaatatcttgaataatatattggaaaa 8373599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 10333404 - 10333476
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  10333404 gacacagttgacccgattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 10333476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 20682879 - 20682807
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   |||||  || ||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  20682879 gacacagttgactccattacgcatttcaatgcataattttgagtttaaatatcttgaataatatgttagaaaa 20682807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 1749003 - 1749070
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||  ||||| |||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  1749003 agttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 1749070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 38963999 - 38963960
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  38963999 taattttgagtttaaatatcttgaataatatattagaaaa 38963960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 20917775 - 20917825
Alignment:
Q  34 atatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  20917775 atatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 20917825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 22718395 - 22718441
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  22718395 caatacataattttgagcttaaatatcttgaataatatgttagaaaa 22718441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 40471973 - 40471907
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  40471973 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 40471907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 41319750 - 41319816
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  41319750 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 41319816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 4137646 - 4137581
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatat 77  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||    
T  4137646 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatat 4137581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 16333713 - 16333644
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |||||  ||| |||| |||||||||||  ||||||||||| ||||||||||| |||||    
T  16333713 acagttgacctaattacgcataccaatgcataattttgaccttaaatatcttgaataatatatttgaaaa 16333644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 7724436 - 7724508
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||| ||||||||||||| ||||||||||| |||||    
T  7724436 gacacagttgacccaattacgcataccaatgcgtaattttgggtttaaatatcttgaataatatattggaaaa 7724508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 12209194 - 12209154
Alignment:
Q  44 ataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  12209194 ataattttgagtttaaatatcttgaataatatattggaaaa 12209154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 15177606 - 15177534
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||| ||||| ||||||| ||   ||| |||||||||||||||||||||||| | |||||||||| ||||    
T  15177606 gacacagatgaccatattacacatgaaaatgcataattttgagtttaaatatcttgagtaatatattataaaa 15177534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 31603243 - 31603315
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||   ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  31603243 gacacagttgacccaattaggcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 31603315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 41437069 - 41436997
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||   ||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  41437069 gacacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 41436997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 5096452 - 5096413
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  5096452 taattttgagtttaaatatcttgaataatatattggaaaa 5096413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 8896507 - 8896452
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaa 68  Q
    |||||||||||| ||||||| || ||||| ||||||||||||  ||||||||||||    
T  8896507 acacagttgaccctattacacatgtcaatgcataattttgaggctaaatatcttaa 8896452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 9273849 - 9273790
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatata 76  Q
    ||||||||||||||| ||| ||||| ||||| |||||  ||||||||||| |||||||||    
T  9273849 agttgaccttattacgtatgtcaatgcataactttgaacttaaatatcttgaataatata 9273790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 37987795 - 37987834
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  37987795 taattttgagtttaaatatcttgaataatatattggaaaa 37987834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 41575774 - 41575727
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  41575774 tcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 41575727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 6729955 - 6730001
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  6729955 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 6730001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 37317087 - 37317041
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  37317087 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 37317041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 42754181 - 42754247
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  ||| ||||   |||||||||||||||||||||| |||||||||||    
T  42754181 gacacagttgacccaattacgcataccaatgtgtaattttgagtttaaatatcttgaataatatatt 42754247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 2e-18; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 41007784 - 41007856
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||| ||| |||||  ||||||||||||||||||||||| |||||||||||| ||||    
T  41007784 gacacagttgaccttattacgtatgtcaatgtataattttgagtttaaatatcttgaataatatattataaaa 41007856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 9136492 - 9136561
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||| || |||||| ||||||||||    
T  9136492 acagttgaccttattatatatgacaatacataattttgagtttaaatatattgaataatgtattagaaaa 9136561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 38069288 - 38069216
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  |||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  38069288 gacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttaaataatatattggaaaa 38069216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 5842355 - 5842285
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaa 82  Q
    ||||||||||||| ||||||  || ||||| |||||||||||| ||||||||||| |||||||||||||||    
T  5842355 gacacagttgaccatattacgaatgtcaatgcataattttgagcttaaatatcttgaataatatattagaa 5842285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 3123973 - 3124045
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| ||||  |||||| ||||||||||| |||||||||||||||||    
T  3123973 gacacagttgaccttattacgcatgtcaatgcatatctttgagcttaaatatcttgaataatatattagaaaa 3124045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 16806973 - 16807045
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| |||||||||||||||||||||||| ||||||||||| |||||    
T  16806973 gacacagttgacccaattacgcataccaatgcataattttgagtttaaatatcttgaataatatattggaaaa 16807045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 18756825 - 18756754
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||| |||||  |||||||| ||||||||||||||||| ||| || |||||||||||||||||    
T  18756825 gacacagttgacct-attacgcatatcaatgcataattttgagtttaactattttgaataatatattagaaaa 18756754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 25571519 - 25571587
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||| ||||||  || ||||||||||||||| || ||||||||||| |||||||||||||    
T  25571519 gacacagttgaccctattacgaatgtcaatacataattttaagcttaaatatcttgaataatatattag 25571587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 35693657 - 35693729
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  35693657 gacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 35693729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 38442050 - 38441978
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| ||| ||| ||||| ||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  38442050 gacacagttgactttactacgtatattaatgcataattttgagcttaaatatcttgaataatatattaaaaaa 38441978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 48448755 - 48448683
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||| |||  ||| |||||||||||| ||||||||||| |||||||||||||||||    
T  48448755 gacacagttgacccaattacacatactaatgcataattttgagcttaaatatcttgaataatatattagaaaa 48448683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 40818522 - 40818596
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagttt--aaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||  | ||||||| |||||||||||||||||    
T  40818522 gacacagttgaccctattacatataccaatgcataattttgagcttcaatatatcttgaataatatattagaaaa 40818596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 4620270 - 4620229
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  4620270 cataattttgagtttaaatatcttgaataatatattagaaaa 4620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 9173163 - 9173235
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  || ||||| |||||||||||  ||||||||||| |||||||||||| ||||    
T  9173163 gacacagttgaccctattacgcatgtcaatgcataattttgaacttaaatatcttgaataatatattataaaa 9173235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 19817572 - 19817500
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||||||  ||   ||| ||||||||| |||||||||||||| |||||||||||||||||    
T  19817572 gacatagttgaccttattacgcatgctaatgcataattttaagtttaaatatcttgaataatatattagaaaa 19817500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 46242305 - 46242377
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  ||   ||| ||||| |||||| |||||||||||||||||||||| ||||||    
T  46242305 gacacagttgaccttattacgcatgataatgcataactttgagcttaaatatcttaaataatatatcagaaaa 46242377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 25273866 - 25273916
Alignment:
Q  34 atatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  25273866 atatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 25273916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26651075 - 26651137
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataata 74  Q
    ||||||||||||| ||||||  ||| ||| ||||||||||||| ||||||||||| |||||||    
T  26651075 gacacagttgaccctattacgcataccaaaacataattttgagcttaaatatcttgaataata 26651137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 32222782 - 32222724
Alignment:
Q  19 ttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatat 77  Q
    ||||||||||| | ||| ||||||||||| ||||||||||| |||||| ||||||||||    
T  32222782 ttgaccttattgcgtatgtcaatacataactttgagtttaattatcttgaataatatat 32222724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 14543638 - 14543683
Alignment:
Q  39 aatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||||    
T  14543638 aatacacaattttgagtttaaatatctttaataatctattagaaaa 14543683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31496477 - 31496545
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||  || ||||| |||||||||||  ||||||||||| ||||| |||||||||||    
T  31496477 acagttgaccttattacgcatgtcaatgcataattttgaacttaaatatcttgaataa-atattagaaaa 31496545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 33377008 - 33376939
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||| || ||| |||| |||||  |||| |||||| ||||||||||| |||||||||||||||||    
T  33377008 acagttgactttgttatatatgtcaatgtataactttgagcttaaatatcttgaataatatattagaaaa 33376939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 38850912 - 38850867
Alignment:
Q  39 aatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||    
T  38850912 aatatataattttgagcttaaatatcttgaataatatattagaaaa 38850867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32345610 - 32345682
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  32345610 gacacagttgactcaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 32345682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 36820113 - 36820041
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||| | ||||||||||| |||||    
T  36820113 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcatgaataatatattggaaaa 36820041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 47713259 - 47713331
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||||||||||||  || ||||| ||||| |||||| ||||||||| | |||||||||||| ||||    
T  47713259 gacacaattgaccttattacgcatgtcaatgcataactttgagcttaaatatcgtgaataatatattataaaa 47713331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 27621155 - 27621194
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  27621155 taattttgagtttaaatatcttgaataatatattggaaaa 27621194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 32972193 - 32972234
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| ||||||||||| |||||||| ||||||||    
T  32972193 cataattttgagcttaaatatcttgaataatatgttagaaaa 32972234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 41845006 - 41844941
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    ||||| |||||||||||||  || | ||| ||||| |||||| ||||||||||| |||||||||||    
T  41845006 acacatttgaccttattacgcattttaatgcataactttgagcttaaatatcttcaataatatatt 41844941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 2e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 12677217 - 12677145
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| ||||||| |||||||| |||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  12677217 gacatagttgactttattacacatatcaatgcataattttgagtttaaatattttgaataatatattagaaaa 12677145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16661433 - 16661504
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||||||||| ||||    
T  16661433 acacagttgaccttattacgtatgtcaatacataactttgagcttaaatatcttgaataatatattataaaa 16661504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 10106048 - 10105976
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| |||||| ||||||||| |||||||||||| || |||||||| ||||||||| |||||||    
T  10106048 gacacagttgaccatattacgtatatcaatgcataattttgagatttaatatcttgaataatatactagaaaa 10105976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 2141805 - 2141733
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  2141805 gacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 2141733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 6188487 - 6188559
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||||||||||||||| |||||    
T  6188487 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttaaataatatattggaaaa 6188559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 2667156 - 2667222
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||| |||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  2667156 gacacagttgacctaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 2667222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 6142338 - 6142410
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  6142338 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 6142410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 16969616 - 16969544
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  16969616 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 16969544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 17496159 - 17496231
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  17496159 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 17496231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29514858 - 29514930
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| ||||||  |||||  |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  29514858 gacacaattgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 29514930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 26210958 - 26210912
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||    
T  26210958 caatacataattttgaacttaaatatctttaataatatattagaaaa 26210912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 30699499 - 30699426
Alignment:
Q  12 gacacagttgaccttattacatatatc-aatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||| | ||| | |||||||||||||||||||||  |||||||||||||||||    
T  30699499 gacacagttgaccaaattacgtatacccaatgcgtaattttgagtttaaatatctagaataatatattagaaaa 30699426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 995800 - 995728
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| ||||   |||||||||||||||||||||| ||||||||||| |||||    
T  995800 gacacagttgacccaattacgcataccaatgagtaattttgagtttaaatatcttgaataatatattggaaaa 995728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 2398007 - 2397935
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | ||||||| |||||||||||||| ||||||||||| |||||    
T  2398007 gacacagttgacccaattacgcataccaatgcgtaattttaagtttaaatatcttgaataatatattggaaaa 2397935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 2656501 - 2656573
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | ||||||| |||||||||||||| ||||||||||| |||||    
T  2656501 gacacagttgaccaaattacgcataccaatgcgtaattttaagtttaaatatcttgaataatatattggaaaa 2656573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 4889957 - 4890021
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatata 76  Q
    ||||| ||||| ||||||||  || ||||| |||||||||||| ||||||||||| |||||||||    
T  4889957 gacacggttgatcttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatata 4890021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 31948474 - 31948545
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||||||||||||  || ||||| ||||||| |||| |||| |||||| |||||||||||||||||    
T  31948474 gacacaattgaccttattacgcatgtcaatgcataattctgagcttaa-tatcttgaataatatattagaaaa 31948545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 35117513 - 35117441
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  |||  ||| |||||||||||| |||||||||||  ||||||||||||||||    
T  35117513 gacacagttgacccaattacgcatactaatgcataattttgagcttaaatatcttggataatatattagaaaa 35117441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 2913101 - 2913062
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  2913101 taattttgagtttaaatatcttgaataatatattggaaaa 2913062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 10109243 - 10109314
Alignment:
Q  13 acacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||||||  ||   ||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  10109243 acacagtttaccttattacgcatgcaaatgcataactttgagcttaaatatcttgaataatatattagaaaa 10109314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 24825369 - 24825330
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  24825369 taattttgagtttaaatatcttgaataatatattggaaaa 24825330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 32541341 - 32541380
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  32541341 taattttgagtttaaatatcttgaataatatattggaaaa 32541380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 33347968 - 33348022
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatctt 66  Q
    |||||||||||||  |||||  |||| ||| ||||||||||||||||||||||||    
T  33347968 gacacagttgacccaattacgcatattaatgcataattttgagtttaaatatctt 33348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-18; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 17492904 - 17492832
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  17492904 gacacagttaaccttattacacatatcaatgcataactttgagcttaaatatcttgaataatatattagaaaa 17492832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 1613050 - 1613116
Alignment:
Q  18 gttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||| ||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  1613050 gttgaccctattacgcatgtcaatacataattttgagtttaaatatcttgaataatatattagaaaa 1613116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 29821287 - 29821215
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  ||| |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  29821287 gacacagttgaccctattacgcataccaatgcataattttgagcttaaatatcttgaataatatattagaaaa 29821215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 24505748 - 24505680
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||| |||||||||||||||  || ||||||||||| |||||| ||||||||||| |||||||||||||    
T  24505748 gacatagttgaccttattacgcatgtcaatacataactttgagcttaaatatcttgaataatatattag 24505680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 30387064 - 30386996
Alignment:
Q  16 cagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| |||| ||||||||||||||||| ||| || |||||||| |||||||||||| ||||    
T  30387064 cagttgaccttactacacatatcaatacataatttcgagctttaatatcttgaataatatattataaaa 30386996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 37164254 - 37164182
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  ||| |||| |||||||||||| ||||||||||| ||||||||| |||||||    
T  37164254 gacacagttgaccctattacgcataccaatgcataattttgagcttaaatatcttgaataatataatagaaaa 37164182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 39260589 - 39260517
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| |||| ||||||||  || ||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  39260589 gacacaattgatcttattacgcatgtcaatgcataattttgaatttaaatatcttgaataatatattagaaaa 39260517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 47833970 - 47834042
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| |||||||  || ||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  47833970 gacacagttgactttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattataaaa 47834042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 55631701 - 55631773
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  55631701 gacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 55631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 6520657 - 6520600
Alignment:
Q  27 attacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| ||| ||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  6520657 attacgtatttcaatgcataattttgagcttaaatatcttgaataatatattagaaaa 6520600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 1615776 - 1615704
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| || ||||||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  1615776 gacacaattaaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaa 1615704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 2805997 - 2806065
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||    
T  2805997 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattag 2806065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 8525242 - 8525314
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||||||||    
T  8525242 gacacggttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattagaaaa 8525314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 28914605 - 28914533
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  28914605 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 28914533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 37588356 - 37588428
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |||||| |  ||  |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  37588356 gacacagttgatcttattgcgcatgccaatgcataattttgagcttaaatatctttaataatatattagaaaa 37588428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 48380993 - 48380921
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  48380993 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 48380921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 51306060 - 51306132
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   |||||  || ||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  51306060 gacacagttgactccattacgcatttcaatgcataattttgagtttaaatatcttgaataatatgttagaaaa 51306132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 54802889 - 54802956
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||  || | ||| |||||||||||| ||||||||| ||||||| |||||||||||    
T  54802889 agttgaccttattacgcatgttaatgcataattttgaggttaaatatcgtaaataacatattagaaaa 54802956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 1981232 - 1981278
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaa 83  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||    
T  1981232 tcaatgcataattttgagtttaaatatcttgaataatatgttagaaa 1981278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 39332656 - 39332722
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||    
T  39332656 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatatt 39332722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 39171192 - 39171123
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |||||  ||| |||| | | |||||||||||||||||||| ||||||||||| |||||    
T  39171192 acagttgacctaattacgcataccaatgcgtgattttgagtttaaatatcttgaataatatattggaaaa 39171123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 42185508 - 42185439
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||| |||||| |||   ||| |||||||||||| |||||||||||||||||||| ||| ||||    
T  42185508 acagttgaccatattacctattcaaatgcataattttgagcttaaatatcttaaataatatgttataaaa 42185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 52818547 - 52818588
Alignment:
Q  43 cataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  52818547 cataattttgagcttaaatatcttgaataatatattagaaaa 52818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 3708490 - 3708418
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||| |||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  3708490 gacacagttaacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 3708418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 43447402 - 43447330
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||   ||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  43447402 gacacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 43447330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 50685157 - 50685085
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||| ||||||  ||| ||||  ||||||||||  |||||||| || |||||||||||||||||    
T  50685157 gacacagttgaccctattacgcataccaatgtataattttgaacttaaatattttgaataatatattagaaaa 50685085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 10385052 - 10385013
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  10385052 taattttgagtttaaatatcttgaataatatattggaaaa 10385013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 11260939 - 11260872
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatta 79  Q
    |||||| |||| ||||||||  || ||||| |||||||||| | ||||||||||| ||||||||||||    
T  11260939 gacacaattgatcttattacgcatgtcaatgcataattttgtgcttaaatatcttgaataatatatta 11260872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 31657208 - 31657255
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  31657208 tcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 31657255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 40411467 - 40411506
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  40411467 taattttgagtttaaatatcttgaataatatattggaaaa 40411506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 42862124 - 42862191
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||  ||| |||||||| |||  |||||||| | |||||||||||| |||||||||||||||||    
T  42862124 agttgactatatcacatatattaatggataattttaaatttaaatatctttaataatatattagaaaa 42862191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 44210361 - 44210314
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  44210361 tcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 44210314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 1378019 - 1377973
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  1378019 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 1377973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 28898923 - 28898969
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  28898923 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 28898969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 28988246 - 28988292
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  28988246 caatgcataattttgagcttaaatatcttgaataatatgttagaaaa 28988292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 37667634 - 37667672
Alignment:
Q  46 aattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  37667634 aattttgagtttaaatatcttgaataatatattggaaaa 37667672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 48652709 - 48652643
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  ||| ||||   |||||||||||||||||||||| |||||||||||    
T  48652709 gacacagttgacccaattacggataccaatgtgtaattttgagtttaaatatcttgaataatatatt 48652643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 4271840 - 4271905
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatat 77  Q
    ||||||||||||||||||||  ||  |||| ||||| |||||| ||||||||||| ||| ||||||    
T  4271840 gacacagttgaccttattacgcatgccaatgcataactttgagcttaaatatcttgaattatatat 4271905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 43047591 - 43047558
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||||||||||| |||||||||||    
T  43047591 taattttgagtttaaatatcttgaataatatatt 43047558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 46608451 - 46608378
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataa-tatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||| |||||| |||||    
T  46608451 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataagtatattggaaaa 46608378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 19562 - 19630
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| |||||||||||| ||||||||||| |||||||||||||    
T  19562 gacacagttgaccttattacgaatgtcaatgcataattttgagcttaaatatcttgaataatatattag 19630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 8627368 - 8627300
Alignment:
Q  17 agttgaccttattacatatatcaatacataatttt-gagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||| ||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  8627368 agttgatcttattacacatatcaatgcataatttttgagtttaaatatcttgaataatatattagaaaa 8627300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 1918660 - 1918729
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||| ||  |||| |||||||||||  ||||||||||| |||||||||||||||||    
T  1918660 acagttgaccttattacacatgccaatgcataattttgaccttaaatatcttgaataatatattagaaaa 1918729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 14639545 - 14639614
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| |||||||| ||| ||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  14639545 acagttgatcttattacgtatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaa 14639614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 2551474 - 2551526
Alignment:
Q  32 atatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  2551474 atatatcaatgcataattttgagtttaaatatcttgaataatatattaaaaaa 2551526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 9936715 - 9936787
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  |||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  9936715 gacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 9936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 14633244 - 14633172
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||| |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  14633244 gacacagttgacctaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 14633172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 26801928 - 26802000
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||||||    
T  26801928 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagaaaa 26802000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 26809478 - 26809550
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||||||    
T  26809478 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagaaaa 26809550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 41410487 - 41410559
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  ||||| |||| |||| | |||||||||||||||||||||| |||||||||||| ||||    
T  41410487 gacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattaaaaaa 41410559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 6735016 - 6734947
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||| |||||| || ||||||  ||||||||||| ||||||||||| |||||||||||| ||||    
T  6735016 acagttgaccctattacgtacatcaatgtataattttgagcttaaatatcttgaataatatattaaaaaa 6734947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 30788439 - 30788370
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||| ||  || ||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  30788439 acagttgaccttataacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattaaaaaa 30788370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 1831587 - 1831515
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||| ||||    
T  1831587 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattaaaaaa 1831515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 2799869 - 2799797
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| |||||||  || |||||  |||| |||||||||||||||||| ||||| |||||||||||    
T  2799869 gacacagttgactttattacgcatgtcaatgtataactttgagtttaaatatcttgaataaaatattagaaaa 2799797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 2806035 - 2805963
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||| |||||||  || |||||  |||| |||||||||||||||||| ||||| |||||||||||    
T  2806035 gacacagttgactttattacgcatgtcaatgtataactttgagtttaaatatcttgaataaaatattagaaaa 2805963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 13548428 - 13548384
Alignment:
Q  34 atatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  13548428 atatcaatacgtaattttgagtttaaatatcttgaataatatatt 13548384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 20023097 - 20023025
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  20023097 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 20023025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 26824505 - 26824573
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||||||| |||||||||||||    
T  26824505 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattag 26824573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 27674454 - 27674386
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| ||||| |||||| ||||||||||| |||||| ||||||    
T  27674454 gacacagttgaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatgtattag 27674386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 27675777 - 27675705
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||   |||||  || ||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  27675777 gacacagttgactccattacgcatttcaatgcataattttgagcttaaatatcttaaataatatgttagaaaa 27675705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 39035797 - 39035725
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||| ||| ||| |||||  ||||||||||| ||||||||||| |||||||||||| ||||    
T  39035797 gacacagtcgaccttactacgtatgtcaatgaataattttgagcttaaatatcttgaataatatattataaaa 39035725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 39925441 - 39925369
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||| ||| |||||| ||| ||||| |||||||||||||||||||||||| |||||||| || |||||    
T  39925441 gacaaagttaaccctattacgtatgtcaatgcataattttgagtttaaatatcttgaataatatgttggaaaa 39925369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 40317054 - 40316982
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||||||||| ||||    
T  40317054 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattaaaaaa 40316982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 39104111 - 39104178
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||  ||  |||| |||||||||||| |||||||| || |||||||||||||||||    
T  39104111 agttgaccttattacgcatgccaatgcataattttgagcttaaatatattgaataatatattagaaaa 39104178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 14140129 - 14140083
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||    
T  14140129 caatgcataattttgagtttaaatatcttgaataatatgttagaaaa 14140083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 20040242 - 20040316
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaaga 86  Q
    |||||||||||||  |||||  ||| |||| | ||||||||| |||||||||||| ||||||||||| |||||||    
T  20040242 gacacagttgacccaattacgcataccaatgcgtaattttgaatttaaatatcttgaataatatattggaaaaga 20040316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 21031853 - 21031799
Alignment:
Q  30 acatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| ||| ||||||||  ||||||||||| |||||||||||||||||    
T  21031853 acatatatcaagacacaattttgatcttaaatatctttaataatatattagaaaa 21031799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 1780972 - 1781044
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| | ||||||||| |||||    
T  1780972 gacacagttgacccaattactcataccaatgcgtaattttgagtttaaatatcttgagtaatatattggaaaa 1781044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 1831297 - 1831233
Alignment:
Q  16 cagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||||||| |||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  1831297 cagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattag 1831233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 14355704 - 14355664
Alignment:
Q  44 ataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  14355704 ataattttgagcttaaatatcttaaataatatattataaaa 14355664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 30721512 - 30721584
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | ||| |||||||||||||||||| ||||||||||| |||||    
T  30721512 gacacagttgacccaattacgcataccaatgcgtaaatttgagtttaaatatcttgaataatatattggaaaa 30721584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32110469 - 32110541
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||| ||||||| |||||||  || ||||| ||||| |||||| || |||||||| |||||||||||||||||    
T  32110469 gacagagttgacattattacgcatctcaatgcataactttgagcttcaatatcttgaataatatattagaaaa 32110541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 40316764 - 40316700
Alignment:
Q  16 cagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||||||| |||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  40316764 cagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattag 40316700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 40796899 - 40796967
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  || ||||| ||||| |||||  ||||||| ||| |||||||||||||    
T  40796899 gacacagttgaccttattacgcatgtcaatgcataactttgaacttaaataccttgaataatatattag 40796967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 41410777 - 41410841
Alignment:
Q  16 cagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    |||||||| |||||||  || ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  41410777 cagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattag 41410841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 10465147 - 10465194
Alignment:
Q  37 tcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  10465147 tcaatgcataattttgagcttaaatatcttgaataatatgttagaaaa 10465194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 14057912 - 14057873
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  14057912 taattttgagtttaaatatcttgaataatatattggaaaa 14057873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 30211601 - 30211640
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  30211601 taattttgagtttaaatatcttgaataatatattggaaaa 30211640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 30351903 - 30351970
Alignment:
Q  17 agttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||  ||||| |||| |||| | |||||||||||||||||||||| || |||||||| |||||    
T  30351903 agttgaccaaattacgtataccaatgcgtaattttgagtttaaatatcttgaacaatatattggaaaa 30351970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 967429 - 967359
Alignment:
Q  14 cacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||| |||||||  ||| |||| |||||||||||  ||||||||||| |||||||  ||||||||    
T  967429 cacagttgactttattacgcataccaatgcataattttgaacttaaatatcttgaataataagttagaaaa 967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 14607385 - 14607451
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||  |||||  |||  ||| | |||||||||||||||||||||| |||||||||||    
T  14607385 gacacagttgacccaattacgcatactaatgcgtaattttgagtttaaatatcttgaataatatatt 14607451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 33402418 - 33402484
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||| ||||  |||||  ||||||||   |||||||||||||||||||||| |||||||||||    
T  33402418 gacacagtagacccaattacgcatatcaatgtgtaattttgagtttaaatatcttgaataatatatt 33402484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 1098379 - 1098346
Alignment:
Q  45 taattttgagtttaaatatcttaaataatatatt 78  Q
    |||||||||||||||||||||| |||||||||||    
T  1098379 taattttgagtttaaatatcttgaataatatatt 1098346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 19344526 - 19344591
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatat 77  Q
    |||||||||||||  |||||  ||| |||| | ||||||||||||||||||| || ||||||||||    
T  19344526 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatattttgaataatatat 19344591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31191007 - 31191076
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||  |||||  ||| |||| | |||||||||||||||||||||| |||||| |||| |||||    
T  31191007 acagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatgtattggaaaa 31191076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 41042679 - 41042736
Alignment:
Q  27 attacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||| ||| ||||| |||||||||||| |||||||| || |||||||| ||||||||    
T  41042679 attacgtatttcaatgcataattttgagcttaaatatattgaataatatgttagaaaa 41042736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 504 - 565
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataat 73  Q
    ||||||||||||| |||||| ||| ||||| |||||||||||| ||||||||||| ||||||    
T  504 gacacagttgaccctattacgtatgtcaatgcataattttgagcttaaatatcttgaataat 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 9357 - 9288
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||||||  ||||||||  |||  ||| |||||||||||||| |||||||||||||||||    
T  9357 acagttgaccttattacgcatatcaatgtatagcttttagtttaaatatcttgaataatatattagaaaa 9288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 5613 - 5541
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  5613 gacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 184200 - 184131
Alignment:
Q  15 acagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||  |||||  ||| |||| | |||||||||||||||||||||| ||||||||||| |||||    
T  184200 acagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaa 184131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 72 - 140
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaataatatattag 80  Q
    ||||||||||||||||||||  ||  ||||  |||| |||||| ||||||||||| |||||||||||||    
T  72 gacacagttgaccttattacgcatgccaatgtataactttgagattaaatatcttgaataatatattag 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 1305 - 1355
Alignment:
Q  34 atatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||||| || ||||||||| | |||||||||||||||||    
T  1305 atatcaatgcataattttaagcttaaatatcctgaataatatattagaaaa 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 1008 - 958
Alignment:
Q  34 atatcaatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    |||||||| ||||||||| || ||||||||| | |||||||||||||||||    
T  1008 atatcaatgcataattttaagcttaaatatcctgaataatatattagaaaa 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 13316 - 13270
Alignment:
Q  38 caatacataattttgagtttaaatatcttaaataatatattagaaaa 84  Q
    ||||||||||||||||  ||||||||||| |||||||| ||||||||    
T  13316 caatacataattttgaccttaaatatcttgaataatatgttagaaaa 13270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 3220 - 3163
Alignment:
Q  12 gacacagttgaccttattacatatatcaatacataattttgagtttaaatatcttaaa 69  Q
    ||||||||||||| ||||||  ||| |||| |||||||||||| |||||||| |||||    
T  3220 gacacagttgaccatattacgcataccaatgcataattttgagcttaaatatattaaa 3163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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