View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2474_low_2 (Length: 362)
Name: NF2474_low_2
Description: NF2474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2474_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 344
Target Start/End: Original strand, 36133455 - 36133782
Alignment:
| Q |
16 |
atgtgccaagtgattagttcatagttatcatacgaaatacagtcaaatttgacgtctctagagtctaaaagatcacttttgacnnnnnnnnnnnnnnnng |
115 |
Q |
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| T |
36133455 |
atgtgccaagtgattagctcatagttatcatacgaaatacagtcaaatttgacgtctctagagtctaaaagatcacttttgacaacaaaaaaaaaaaca- |
36133553 |
T |
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| Q |
116 |
tatacagataatttagaaagtgacattgatagtttgcatacattgtatgactagaaataatcgcacataagcactttaataagagaggtgcacattatat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36133554 |
tatacagataatttagaaagtgacattgatagtttgcatacattgtatgactagaaataatcgcacataagcactttaataagagaggtgcacattatat |
36133653 |
T |
|
| Q |
216 |
tatatatagagcgagagaagagacataggaaacaaacttgtacaacaatataatatcatgggaagccaagatgtgaagttggtaggcttttgggtgagtc |
315 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36133654 |
tatatatagagcgagagaagagacagaggaaacaaacttgtacaacaatataatatcatgggaagccaagatgtgaagttggtaggcttttgggtgagtc |
36133753 |
T |
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| Q |
316 |
catttgttaagagggttgagtgggccttg |
344 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
36133754 |
catttgttaagagggttgagtgggccttg |
36133782 |
T |
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