View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2475_high_1 (Length: 302)
Name: NF2475_high_1
Description: NF2475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2475_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 38548727 - 38548973
Alignment:
| Q |
16 |
atacatttcaagtccaacgttaaattcaaagcacatgtgtgttaacaaatagattagtgaccgagcctattgatttctaacgtgatatttctttgcttat |
115 |
Q |
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| T |
38548727 |
atacatttcaagtccaacgttaaattcaaagcacatgtgtgttaacaaatagattagtgaccgagcctattgatttctaacgtgatatttgtttgcttat |
38548826 |
T |
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| Q |
116 |
gatctaacttgcagattagctgcagaaaagcaacatgtgctcaactctgaaacaatgctaaatagctatccgctatcaatgattacaaaacatacattta |
215 |
Q |
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| T |
38548827 |
gatctaacttgcagattagctgcagaaaagcaacaggtgctcaactctgaaacaatgctatattctaaatagctatcaatgattacaaaacatacattta |
38548926 |
T |
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| Q |
216 |
atttaataatttgcagttctctttatcatacaaacatgtttatagtt |
262 |
Q |
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| T |
38548927 |
atttaataatttgcagttctctttatcatacaaacatgtttatagtt |
38548973 |
T |
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