View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2475_low_2 (Length: 488)
Name: NF2475_low_2
Description: NF2475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2475_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 31 - 475
Target Start/End: Original strand, 41151591 - 41152035
Alignment:
| Q |
31 |
aatttcttcttcgattgtagaaataacttctgtatgataaactttattgaataagcacttcattataagctaatccaatcaaattcgcttaacgatgtta |
130 |
Q |
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| T |
41151591 |
aatttcttcttcgattgtagaaataacttctgtatgataaactttattgaataagcacttcattataagctaatccaatcaaattcgcgtaacgatgtta |
41151690 |
T |
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| Q |
131 |
atgtatgtgagtgtgacgcttcaaggtatcgaagaaagcgagagaaattggttgaaagaacatatgtctcacatcttcctactaaatggggtctatttca |
230 |
Q |
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| T |
41151691 |
atgtatgtgagtgtgacgcttcaaggtatcgaagaaagcgagagaaattggttgaaagaacatatgtctcacatcttcctactaaatggggtctatttca |
41151790 |
T |
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| Q |
231 |
agcatattgttatagttcaaagttggatggaactgagcatgtggctgttgtaaaggtaaatataacttagttaatttgattttcaagataaaacttggaa |
330 |
Q |
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| T |
41151791 |
agcatattgttatagttcaaagttggatggaactgagcatgtggctgttgtaaaggtaaatataacttagttaatttgattttcaagataaaacttggaa |
41151890 |
T |
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| Q |
331 |
cttataattttatttatgaaaacctaaacaaattaaagcataatatttttctcaattataatttcttattggttacttagggaaacataggagatgggca |
430 |
Q |
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| T |
41151891 |
cttataattttatttatgaaaacctaaacaaattaaagcataatatttttctcaattataatttcttattggttacttagggaaacataggagatgggca |
41151990 |
T |
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| Q |
431 |
agatgttctagtaagagtgcattcagaatgtttaactggggatat |
475 |
Q |
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| T |
41151991 |
agatgttctagtaagagtgcattcagaatgtttaactggggatat |
41152035 |
T |
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