View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2477_low_4 (Length: 250)
Name: NF2477_low_4
Description: NF2477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2477_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 5094537 - 5094345
Alignment:
| Q |
10 |
aagaatataaaaatcgtatactcccttacatttctaataaattttagagcttcaatttaatcaaactaattgtttaatgatatataaataaattattttt |
109 |
Q |
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| T |
5094537 |
aagaaaataaaaatcgtatactcccttacatttctaataaattttagaacttcaatttaatcaaactaattgtttaatgatatataaataaattattttt |
5094438 |
T |
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| Q |
110 |
ctaattattcttcatagttaagttaacgtggtatctgcagaatatatcaaaatattgaaaggcaaatacaattcttgattcttatatgctaccaacatat |
209 |
Q |
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| T |
5094437 |
ctaattattcttcatagttaagttaacgtggtatctg----------caaaatattgaaaggcaaatacaattcttgattcttatatgctaccaacattt |
5094348 |
T |
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