View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2479_high_116 (Length: 249)

Name: NF2479_high_116
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2479_high_116
NF2479_high_116
[»] chr1 (4 HSPs)
chr1 (1-192)||(395438-395622)
chr1 (105-182)||(28375690-28375766)
chr1 (115-187)||(31972636-31972708)
chr1 (108-172)||(29529081-29529144)
[»] chr7 (12 HSPs)
chr7 (105-180)||(18343910-18343985)
chr7 (105-180)||(18347439-18347514)
chr7 (105-180)||(18344813-18344888)
chr7 (105-180)||(18581948-18582023)
chr7 (107-180)||(19531553-19531626)
chr7 (107-181)||(42681338-42681411)
chr7 (105-180)||(31299699-31299773)
chr7 (107-180)||(42681195-42681267)
chr7 (115-165)||(9901996-9902046)
chr7 (115-165)||(21515998-21516048)
chr7 (115-165)||(28029733-28029783)
chr7 (115-165)||(36430608-36430658)
[»] chr3 (2 HSPs)
chr3 (107-182)||(45082746-45082821)
chr3 (108-180)||(30440644-30440715)
[»] chr5 (9 HSPs)
chr5 (100-185)||(10050870-10050955)
chr5 (106-180)||(6685889-6685963)
chr5 (111-176)||(9246609-9246674)
chr5 (105-180)||(4195747-4195821)
chr5 (105-180)||(34180899-34180973)
chr5 (115-165)||(3432382-3432432)
chr5 (115-165)||(4630401-4630451)
chr5 (115-165)||(16167781-16167831)
chr5 (115-165)||(35885773-35885823)
[»] chr4 (10 HSPs)
chr4 (111-183)||(748590-748662)
chr4 (105-180)||(1452387-1452462)
chr4 (106-182)||(53051467-53051542)
chr4 (108-180)||(14066299-14066370)
chr4 (115-166)||(32270455-32270506)
chr4 (115-186)||(40818912-40818983)
chr4 (115-186)||(42243869-42243940)
chr4 (115-165)||(7328098-7328148)
chr4 (115-165)||(7984535-7984585)
chr4 (115-165)||(29275996-29276046)
[»] chr8 (5 HSPs)
chr8 (106-183)||(41264116-41264192)
chr8 (115-186)||(4362751-4362822)
chr8 (115-165)||(12132478-12132528)
chr8 (115-165)||(14694837-14694887)
chr8 (115-165)||(33332331-33332381)
[»] chr2 (3 HSPs)
chr2 (115-165)||(5246077-5246127)
chr2 (115-165)||(43903894-43903944)
chr2 (108-173)||(17955705-17955769)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 395622 - 395438
Alignment:
Q  1 ctcaaaataagaacaattgtaagatactggatatgttat-----agctaaacgaaaacaatcatttatatataaaaatatttatattattaaacctctta 95  Q
    |||||||||||||||||||||||||||||||||||||||     ||||||||| |||||||||| |||||||||| |||||||| |||||||| | ||      
T  395622 ctcaaaataagaacaattgtaagatactggatatgttatgttatagctaaacggaaacaatcatatatatataaatatatttatgttattaaaacact-- 395525  T
Q  96 ataaaacatcaagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgttttttagattt 192  Q
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  395524 ----------aagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgttttttagattt 395438  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 28375766 - 28375690
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtt 182  Q
    ||||||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||| |||||||    
T  28375766 caagccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagtcggcgtt 28375690  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 31972708 - 31972636
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtttttta 187  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||  ||||| |  |||||||||||    
T  31972708 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcgagccccacggtgggcgtttttta 31972636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 29529144 - 29529081
Alignment:
Q  108 gccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccac 172  Q
    |||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| |||||    
T  29529144 gccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccac 29529081  T

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Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 18343910 - 18343985
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  18343910 caagccgtcttagctcagctggtagagcgcatggcttttaaccatgtggtcgtgggttcgattcccacagacggcg 18343985  T

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Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 18347439 - 18347514
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  18347439 caagccgtcttagctcagctggtagagcgcatggcttttaaccatgtggtcgtgggttcgattcccacagatggcg 18347514  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 18344813 - 18344888
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  18344813 caagtcgtcttagctcagctggtagagcgcatggcttttaaccatgtggtcgtgggttcgattgccacagacggcg 18344888  T

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Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 18582023 - 18581948
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  18582023 caagccgtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagacggcg 18581948  T

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Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 19531553 - 19531626
Alignment:
Q  107 agccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  19531553 agccgtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagacggcg 19531626  T

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Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 42681411 - 42681338
Alignment:
Q  107 agccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgt 181  Q
    |||||||||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||||||||||    
T  42681411 agccgtcttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagacggcgt 42681338  T

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Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 31299699 - 31299773
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||| |||||    
T  31299699 caagccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagtcggcg 31299773  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 42681267 - 42681195
Alignment:
Q  107 agccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||| |||||    
T  42681267 agccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagtcggcg 42681195  T

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Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 9901996 - 9902046
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  9901996 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 9902046  T

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Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 21515998 - 21516048
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  21515998 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 21516048  T

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Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 28029783 - 28029733
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  28029783 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 28029733  T

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Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 36430658 - 36430608
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  36430658 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 36430608  T

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Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 45082821 - 45082746
Alignment:
Q  107 agccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtt 182  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  45082821 agccgtcttagctcagctggtagagcgcatggcttttaaccatgtggtcgtgggttcgattcccacagacggcgtt 45082746  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 30440644 - 30440715
Alignment:
Q  108 gccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||||||||||| |||||||||||  |||||||||||  ||||||||||||||||| |||||||||||||    
T  30440644 gccgtcttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagacggcg 30440715  T

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Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 10050955 - 10050870
Alignment:
Q  100 aacatcaagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgttttt 185  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  10050955 aacaccaagccgtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagacggcgttttt 10050870  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 6685963 - 6685889
Alignment:
Q  106 aagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    |||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  6685963 aagccgtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagacggcg 6685889  T

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Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 9246609 - 9246674
Alignment:
Q  111 gtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagac 176  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||    
T  9246609 gtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagac 9246674  T

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Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 4195821 - 4195747
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    |||||||||||||||||| |||||||||||  |||||||||||  ||||||||||||||||| |||||||||||||    
T  4195821 caagccgtcttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagacggcg 4195747  T

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Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 34180899 - 34180973
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||| |||||    
T  34180899 caagccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagtcggcg 34180973  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 3432382 - 3432432
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  3432382 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 3432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 4630401 - 4630451
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  4630401 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 4630451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 16167781 - 16167831
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  16167781 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 16167831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 35885823 - 35885773
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  35885823 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 35885773  T

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Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 748590 - 748662
Alignment:
Q  111 gtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgttt 183  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  748590 gtcttagctcagctggtagagcgcatggcttttaaccatgtggtcgtgggtttgattcccacagacggcgttt 748662  T

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Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 1452462 - 1452387
Alignment:
Q  105 caagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    ||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  1452462 caagccgtcttagctcagctggtagagcgcgtggcttttaaccacgtggtcgtgggttcgattcccacagacggcg 1452387  T

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Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 53051542 - 53051467
Alignment:
Q  106 aagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtt 182  Q
    ||||||||||||||||| |||||||||||  |||||||||||  ||||||||||||||||| |||||||||||||||    
T  53051542 aagccgtcttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagacggcgtt 53051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 14066370 - 14066299
Alignment:
Q  108 gccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcg 180  Q
    |||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||| |||||    
T  14066370 gccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagtcggcg 14066299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 32270455 - 32270506
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgat 166  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||||||||||    
T  32270455 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcgat 32270506  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 40818983 - 40818912
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtttttt 186  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||  ||||| |  ||||||||||    
T  40818983 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcgagccccacggtgggcgtttttt 40818912  T

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Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 42243869 - 42243940
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtttttt 186  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||  ||||| |  ||||||||||    
T  42243869 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcgagccccacggtgggcgtttttt 42243940  T

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Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 7328148 - 7328098
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  7328148 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 7328098  T

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Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 7984535 - 7984585
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  7984535 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 7984585  T

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Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 29276046 - 29275996
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  29276046 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 29275996  T

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Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 41264116 - 41264192
Alignment:
Q  106 aagccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgttt 183  Q
    |||||| |||||||||| |||||||||||  |||||||||||  ||||||||||||||||| ||||||| ||||||||    
T  41264116 aagccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagtcggcgttt 41264192  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 4362822 - 4362751
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccacagacggcgtttttt 186  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||  ||||| |  ||||||||||    
T  4362822 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcgagccccacggtgggcgtttttt 4362751  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 12132478 - 12132528
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  12132478 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 12132528  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 14694837 - 14694887
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  14694837 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 14694887  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 33332381 - 33332331
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  33332381 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 33332331  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 5246077 - 5246127
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  5246077 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 5246127  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 43903944 - 43903894
Alignment:
Q  115 tagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcga 165  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  43903944 tagctcagttggtagagcgcaaggctcttaaccttgtggtcgtgggttcga 43903894  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 17955705 - 17955769
Alignment:
Q  108 gccgtcttagctcagctggtagagcgcacggcttttaaccgtgtggtcgtgggttcgattcccaca 173  Q
    |||| |||||||||| |||||||||||  |||||||||||  ||||||||||||| ||| ||||||    
T  17955705 gccgacttagctcag-tggtagagcgcgtggcttttaaccacgtggtcgtgggtttgatccccaca 17955769  T

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