View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2479_high_150 (Length: 204)
Name: NF2479_high_150
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2479_high_150 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 32532645 - 32532481
Alignment:
| Q |
24 |
aagaagttctgttttcccatctatagtaagtaataatctgccaaactgaacctctgctacactctagctccctatactccctctttcagctattcaacta |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
32532645 |
aagaagttctgttttcccatctatagtaagtaataatctgccaaactgaacctctgctacactctagctccctacactccctctttcagctattcaacta |
32532546 |
T |
|
| Q |
124 |
gcaataatagttatatttgtggttgcataaataaggcacaaggagttgtgaaaatgccaagttca |
188 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
32532545 |
gcaataatagttacatttgtggttgcataaataaggcaaaaggagttgtgaaaatgccaagttca |
32532481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University