View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2479_high_62 (Length: 323)
Name: NF2479_high_62
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2479_high_62 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 33657512 - 33657804
Alignment:
| Q |
16 |
atgtatgaaaatttaagttcactttcaatccaatctatcaaaaaccaataattgttacaaaaaccaaaagagaacaagnnnnnnnncctttgcagggtgg |
115 |
Q |
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| T |
33657512 |
atgtatgaaaatttaagttcactttcaatccaatctatcaaaaaccaataattgttacaaaaaccaaaagagaacaagaaaaaaa-cctttgcagggtgg |
33657610 |
T |
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| Q |
116 |
ctttggtgaaccatggagcatatgtaggttcaggacataaagtgatggaatagccaccttttgaaatctgatctttggcacatttaagatgagaaacaaa |
215 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33657611 |
ctttggtgaaccatggagcatatgtagattcaggacataaagtgatggaatagccaccttttgaaatctgatctttggcacatttaagatgagaaacaaa |
33657710 |
T |
|
| Q |
216 |
cggttctaacagcccagaagctagtctttcgctaacatcactagcaacaatcatcaagtcacatcttcaaaatagaaacacacaatgtcaaaac |
309 |
Q |
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|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33657711 |
cggttctaacagcccagaagctagtctttcactaacaccactagcaacaatcatcaagtcacatcttcaaaatagaaacacacaatgtcaaaac |
33657804 |
T |
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