View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2479_high_94 (Length: 266)
Name: NF2479_high_94
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2479_high_94 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 13087273 - 13087510
Alignment:
| Q |
19 |
cttcatgcaaatgcaggagactccaatgtaagtattttaattacactcttcacttcatttaattacactaacctcatttaatttccatttgatcttgtaa |
118 |
Q |
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| T |
13087273 |
cttcatgcaaatacaggagactccaatgtaagtattttaattaccctcttcactttatttaattacactaatctcatttaatttccatttgatcttgtaa |
13087372 |
T |
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| Q |
119 |
ctctaatgatcagcatattcatgtagtaataatcattatcatttgtttggattaaacaatactcacattattacatccaaaaaacctcactccattttga |
218 |
Q |
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||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13087373 |
ctctaatgatcggcatatgcatgaagtaataaccattatcatttgtttggattaaacaatactcacattattacatccaaaaaacctcactccattttga |
13087472 |
T |
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| Q |
219 |
taggagccagatccaatacgaccttattgaaacctatg |
256 |
Q |
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||||||||||||||||||||||||||||||||| |||| |
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| T |
13087473 |
taggagccagatccaatacgaccttattgaaacgtatg |
13087510 |
T |
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