View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2479_low_147 (Length: 236)
Name: NF2479_low_147
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2479_low_147 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 44630154 - 44630375
Alignment:
| Q |
1 |
tgatacatctaagtcatcaaacgtgttaatttacatatatttctacgtttaccacctctccaaactactacaattttcannnnnnnccttttgaaagata |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
44630154 |
tgatacatctaagtcatcaaacgtgttaatttacatatatttctacgtttaccacctctccaaactactacaattttcatttttttccttttgaaagata |
44630253 |
T |
|
| Q |
101 |
attttctatttaatactatgccggcacaaagaattaacttgtaagggatttggccttattgttggatcctggcatttgtgaggtttcctagttttaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
44630254 |
attttctatttaatactatgccggcacaaaaaattaacttgtaagggatttggccttattgttggatcctggcatttgtgaggtttcctggttttaaatt |
44630353 |
T |
|
| Q |
201 |
ttaatgcattcacggacaatac |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
44630354 |
ttaatgcattcacggacaatac |
44630375 |
T |
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